Mercurial > repos > jackcurragh > ribogalaxy_get_chrom_sizes

diff get_chrom_sizes/calculating_chrom.sizes.py @ 40:9b2bb994fc76 draft

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author jackcurragh
date Fri, 10 Feb 2023 12:20:56 +0000
parents feeee18b0084
children
line wrap: on
line diff
--- a/get_chrom_sizes/calculating_chrom.sizes.py	Fri Sep 23 14:47:40 2022 +0000
+++ b/get_chrom_sizes/calculating_chrom.sizes.py	Fri Feb 10 12:20:56 2023 +0000
@@ -21,7 +21,7 @@
 	if line[0] == '>':
 		if record:
 			records.append(record)
-		record = [line.strip("\n").split(' ')[0][1:], 0]
+		record = [line.strip("\n").split(' ')[0].split(" ")[0][1:], 0]
 
 	else:
 		sequence = line.strip('\n')