Mercurial > repos > jankanis > blast2html

annotate blast2html.xml @ 28:8a8c0c71b5d1

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add blast2html.xml config setting
author Jan Kanis <jan.code@jankanis.nl>
date Thu, 15 May 2014 16:46:30 +0200
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1 <tool id="blast2html" name="blast2html" version="0.0.1">
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2
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3 <description>Convert BLAST XML to HTML</description>
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4
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5 <requirements>
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6 <requirement type="python-module">jinja2</requirement>
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7 <requirement type="python-module">lxml</requirement>
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8 </requirements>
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9
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10 <command interpreter="python">blast2html.py -i "${input}" -o "${output}"</command>
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11
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12 <inputs>
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13 <param format="blast" name="input" type="data" label="Source file"/>
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14 </inputs>
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15
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16 <outputs>
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17 <data format="html" name="output" />
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18 </outputs>
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19
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20 <tests>
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21 <test>
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22 <param name="input" value="blast-view_test1_in.xml"/>
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23 <output name="out_file1" file="blast-view_test1_out.html"/>
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24 </test>
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25 <test>
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26 <param name="input" value="blast-view_test2_in.xml"/>
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27 <output name="out_file1" file="blast-view_test2_out.html"/>
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28 </test>
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29 </tests>
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30
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31 <help>
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32 This tool converts the default BLAST XML result into a HTML document
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33 </help>
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34
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35 </tool>