Mercurial > repos > jeremie > package_pindel_0_2_5

comparison tool_dependencies.xml @ 27:ae37c0fd6590 draft default tip

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author jeremie
date Fri, 20 Jun 2014 10:40:33 -0400
parents 47817c968422
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26:47817c968422 27:ae37c0fd6590
29 THREADS= 29 THREADS=
30 COLOUSINGBD15_TIME=60 30 COLOUSINGBD15_TIME=60
31 COLOWOBD15_TIME=80 31 COLOWOBD15_TIME=80
32 SIM1CHRVS20305_TIME=60" > Makefile.local 32 SIM1CHRVS20305_TIME=60" > Makefile.local
33 </action> 33 </action>
34 <action type="shell_command">make SAMTOOLS=$samtools THREADS=2</action> 34 <action type="shell_command">make SAMTOOLS=samtools THREADS=2</action>
35 <action type="move_file"> 35 <action type="move_file">
36 <source>pindel</source> 36 <source>pindel</source>
37 <destination>$INSTALL_DIR/</destination> 37 <destination>$INSTALL_DIR/</destination>
38 </action> 38 </action>
39 <action type="set_environment"> 39 <action type="set_environment">