diff all stuff/differenceFinder.xml @ 2:beba4066121e draft

Uploaded
author jfb
date Wed, 16 Jan 2019 14:33:39 -0500
parents 23eea82f5192
children dff99bed3f56
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--- a/all stuff/differenceFinder.xml	Wed Jan 16 14:20:15 2019 -0500
+++ b/all stuff/differenceFinder.xml	Wed Jan 16 14:33:39 2019 -0500
@@ -13,17 +13,16 @@
     ]]></command>
     <inputs>
 		<param format="csv" name="input1" type="data" label="First Substrate Set"/>
-        <param format="csv" name="input2" type="data" label="First Substrate Background Frequency"/>
+		<param format="csv" name="input2" type="data" label="First Substrate Background Frequency"/>
 		<param format="csv" name="input3" type="data" label="Second Substrate Set"/>
 		<param format="csv" name="input4" type="data" label="Second Substrate Background Frequency"/>
 		<param name="outGroup" type="text" value="kinase" label="Kinase Name"/>
     </inputs>      
     <outputs>
-        <data format="csv" name="substrates1" from_work_dir="1R1 substrates.csv" label="${outGroup}_First_Unshared_Substrates.csv"/>
-		<data format="csv" name="SBF1" from_work_dir="1R1 SBF.csv" label="${outGroup}_First_Unshared_SBF.csv"/>
-		
-		 <data format="csv" name="substrates2" from_work_dir="1R2 subs.csv" label="${outGroup}_Second_Unshared_Substrates.csv"/>
-		<data format="csv" name="SBF2" from_work_dir="1R2 SBf.csv" label="${outGroup}_Second_Unshared_SubstratesSBF.csv"/>
+		<data format="csv" name="substrates1" from_work_dir="1RS.csv" label="${outGroup}_First_Unshared_Substrates.csv"/>
+		<data format="csv" name="SBF1" from_work_dir="1RSBF.csv" label="${outGroup}_First_Unshared_SBF.csv"/>
+		 <data format="csv" name="substrates2" from_work_dir="2RS.csv" label="${outGroup}_Second_Unshared_Substrates.csv"/>
+		<data format="csv" name="SBF2" from_work_dir="2RSBF.csv" label="${outGroup}_Second_Unshared_SubstratesSBF.csv"/>
     </outputs>
     <tests>
         <test>