annotate rnaseq/cutadapt/test-data/5.maf @ 11:a712b378e090

cutadapt added
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 16:33:42 +0100
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
11
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1 ##maf version=1
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
2 a score=64549.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
3 s hg17.chr1 147962192 9 + 245522847 TCATTTAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
4 s panTro1.chr1 129698808 9 + 229575298 TCATTTAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
5 s mm5.chr3 65458475 7 - 160575607 --ATTTGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
6 s rn3.chr2 68236843 7 - 258222147 --ATTTGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
7 s canFam1.chr17 62929731 9 + 66886099 TTATTTGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
8
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
9 a score=37247.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
10 s hg17.chr1 147962201 43 + 245522847 GACAATTTTCTGGCGCAAGGCTCGGGGCCCAGAGCCAGGGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
11 s panTro1.chr1 129698817 43 + 229575298 GACAATTTTCTGGCGCAAGGCTCGGGGCCCAGAGCCAGGGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
12 s mm5.chr3 65458482 43 - 160575607 GACAATCTTCTGACGCAAGGCTCGAGGCCCAGAGCCAGGTAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
13 s rn3.chr2 68236850 43 - 258222147 GACAATCTTCTGACGCAAGGCTCGGGGCCCAGCGCCAGGGAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
14 s canFam1.chr17 62929740 43 + 66886099 GACAATTTTCTGGCGCAAGGCTCGGGGCCCAGAACCAGGGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
15 s danRer1.chr10 19400803 43 + 25436222 GGCGCTCTGCTTGAGCACAGCTTTGGGTCGTGCGCTCTTCAAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
16
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
17 a score=1000.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
18 s hg17.chr1 147962244 1 + 245522847 G
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
19 s panTro1.chr1 129698860 1 + 229575298 G
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
20 s mm5.chr3 65458525 1 - 160575607 G
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
21 s rn3.chr2 68236893 1 - 258222147 G
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
22 s canFam1.chr17 62929783 1 + 66886099 G
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
23
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
24 a score=0.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
25 s hg17.chr1 147962244 3 + 245522847 GGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
26
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
27 a score=3000.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
28 s hg17.chr1 147962245 2 + 245522847 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
29 s panTro1.chr1 129698861 2 + 229575298 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
30 s mm5.chr3 65458526 2 - 160575607 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
31 s rn3.chr2 68236894 2 - 258222147 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
32 s canFam1.chr17 62929784 2 + 66886099 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
33 s fr1.chrUn 290886762 2 + 349519338 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
34
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
35 a score=18092.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
36 s hg17.chr1 147962247 26 + 245522847 TCAGGAGGTGGCGGGCCGGGGCC-----CAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
37 s panTro1.chr1 129698863 26 + 229575298 TCAGGAGGTGGCGGGCCAGGGCC-----CAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
38 s mm5.chr3 65458528 26 - 160575607 TCGGGGGGTGGGGGCCCGGGGCC-----CAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
39 s rn3.chr2 68236896 26 - 258222147 TCGGGGGGTGGGGGCCCGGGGCC-----CAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
40 s canFam1.chr17 62929786 26 + 66886099 TCGGGAGGTGGTGGGCCAGGGCC-----CAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
41 s fr1.chrUn 290886764 26 + 349519338 TGATGAGGAATCGAGTCCTGTGG-----CAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
42 s danRer1.chr10 19400846 31 + 25436222 TTAGCAGGTGAATCGCTAGCGTCGGTGTTAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
43
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
44 a score=219213.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
45 s hg17.chr1 147962273 178 + 245522847 GGCTGAGGCAGTGGGCGGCAGTCCATGGGCAGTAATGTACTTCTTGTAAGCCTCACGAATGATCTTGAAGGCTCGAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTATAGGGCTGGACGATGGGTCACTGGACAGACCTCACGAACAGGGACTTTTGGG---GGCCGCCCTTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
46 s panTro1.chr1 129698889 178 + 229575298 GGCTGAGGCAGTGGGCGGCAGTCCATGGGCAGTAATGTACTTCTTGTAAGCCTCACGAATGATCTTGAAGGCTCGAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTATAGGGCTGGACGATGGGTCACTGGACAAACCTCACGAACAGGGACTTTTGGG---GGCCGCCCTTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
47 s mm5.chr3 65458554 178 - 160575607 CGCCGAGGCGGTGGGTGGAAGTCCGTGGGCAGTGATGTACTTCTTGTACGCCTCACGGATGATCTTGAAGGCTCTAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTACAAAGCTGGACGGTGGGTCACTGGGCAGACCTCCCGCACCGGGACCTTCGGG---GGTCGCCCCTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
48 s rn3.chr2 68236922 178 - 258222147 CGCTGAGGCAGTGGGTGGTAGTCCGTGGGCAGTGATGTACTTCTTGTACGCCTCACGGATGATCTTGAAGGCTCTAGCAGTGGCATAGGGTATGTCTGTAACAGGGTCCCGGTACAAAGCTGGACGGTGGGTCACTGGGCAGACCTCCCGAACAGGGACCTTTGGT---GGTCGCCCTTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
49 s canFam1.chr17 62929812 178 + 66886099 GGCTGAGGCAGTGGGCGGCAGTCCGTGGGCAGTGATGTACTTCTTGTAGGCCTCACGGATGATCTTGAAGGCTCGAGCAGTGGCGTAGGGGATGTCTGTGACAGGGTCCCGGTACAGGGCTGGGCGATGGGTCACGGGGCAGACCTCCCGAACAGGGACCTTTGGG---GGCCGGCCTTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
50 s fr1.chrUn 290886790 179 + 349519338 CTCCAGG--AGTGTTTGGGAAGCCGTGTGCAGCCACGTATTTACGGTAAGCTTCTCGGATGATGCGGAAGGCTCGTGCGTTAGCATAAGGTATGTCTGTGACCGGATCTCTGTACAGTGCGATCTTATGCGTGACGGGACAAATCTCCTGGACGGGCAGCTGAGGGCTCGGCTGCCCCTTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
51 s danRer1.chrUn 128306408 178 - 367113659 GGATGGGCCAGTGCAGGGCAGGCCATGAGCAGCCACATACTTCTTATAGGCCTCCCGAATTATCCTGAAGGCCTGTACATTAGCGTAAGGAATGTCAGTGATGGGGTCCCGGTAGAGCGCAGGCTTATGGGTAACAGGACAGACCTCCTGGACAGGTACTCGAGGA---GCAGGCGACTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
52
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
53 a score=84843.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
54 s hg17.chr1 147962451 56 + 245522847 GGGAACCATTCCTCGAAAGTTGCATCATCACTAAAAGTGATGAAGGTACGTGAGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
55 s panTro1.chr1 129699067 56 + 229575298 GGGAACCATTCCTCGAAAGTTGCATCATCACTAAAAGTGATGAAGGTACGTGAGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
56 s mm5.chr3 65458732 56 - 160575607 GGGAACCACTCTTCAAACGTTGCATCATCACTGAACGTGATGAAGGTGCGAGAGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
57 s rn3.chr2 68237100 56 - 258222147 GGGAACCATTCTTCAAACGTGGCATCATCACTGAATGTGATGAAGGTACGTGAGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
58 s canFam1.chr17 62929990 56 + 66886099 GGAAACCATTCCTCAAATGTTGCATCATCACTAAAAGTGATGAAAGTACGCGAGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
59 s galGal2.chrUn 96971568 56 + 165033910 GGGGAAGAACGTTCGAAGGTTTCGTCGTCGCTGAAGGCATTGAAGGTGCGCGAGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
60 s fr1.chrUn 290886972 56 + 349519338 GAAAAGGCCACCTTAAAAGCTTCGTCGTCGCTGAACGTGATGTAAGTACGGGAGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
61 s danRer1.chrUn 128306586 56 - 367113659 GGAAAGACACGCTGGAAGGACTCATCATCACTGAATGTGATGTAGGTGCGAGAGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
62
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
63 a score=25539.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
64 s hg17.chr1 147962507 63 + 245522847 GCG-----AGCAGGGGGGTTGA------------CGGGT------CCAGTCCCAGCATG--AGGAGTCAATGCAGACACCGAGGGAG-C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
65 s panTro1.chr1 129699123 63 + 229575298 GCG-----AGCAGGGGGGTTGA------------CGGGT------CCAGTCCCAGCATG--AGGAGTCAATGCAGAAGGGGAGGGAG-C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
66 s mm5.chr3 65458788 75 - 160575607 GTG-----AGCAGGAGGGGTGGCAGCGGCAGCTCCAGTC------CCGGTCCCAGCATG--TGGAGCCAGTGCAGAGGCTGTAGGAG-C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
67 s rn3.chr2 68237156 63 - 258222147 GTG-----AGGAGGAGGGACGG------------CAGGT------CCAGTGCCAGCATG--TGCAGTCAGTGCAGAGGACGTAGGAG-C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
68 s canFam1.chr17 62930046 63 + 66886099 GCG-----AGGTGGAGGGACAA------------CGGGT------CCAGTGCCGGCATG--GGGAGTCAGTGCAGAAGCTGTGGGAG-T
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
69 s galGal2.chrUn 96971633 66 + 165033910 GCA-----GGCCGGGGCTGCGG------------CCGGG------GCGGCGTCTGCCTGCTGCGGGTCCTGGTCCAACCTGCAAGAGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
70 s danRer1.chrUn 128306646 74 - 367113659 GTGTTTACAGCAGCTGTGTTTG------------TGAATGGGACACCGGGTGCTGCGGA--AAGCGTTGATTCGGACTGGGAAAGAG-C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
71
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
72 a score=14242.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
73 s hg17.chr1 147962570 10 + 245522847 AGGATCAAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
74 s panTro1.chr1 129699186 10 + 229575298 AGGATCAAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
75 s mm5.chr3 65458863 10 - 160575607 AGGATCAAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
76 s rn3.chr2 68237219 10 - 258222147 AGGATCAAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
77 s canFam1.chr17 62930109 10 + 66886099 AGGATCCAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
78 s galGal2.chrUn 96971699 10 + 165033910 GGGGTCAGCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
79
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
80 a score=550634.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
81 s hg17.chr1 147984545 85 + 245522847 ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTTTGATCCCGCGGTCCCTTCCTGTACCTTGTCCTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
82 s panTro1.chr1 129723125 85 + 229575298 ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTTTGATCCCGCGGTCCCTTCCTGTACCTCGTCCTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
83 s mm5.chr3 65474800 76 - 160575607 ATGGCGTCCGCCTCCTCAGGGCCAGCG---GCGGCCGGGTTTTCATCCCTTGATGCCGGGGCCCCTGCTGGTA------CCGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
84 s rn3.chr2 68255714 76 - 258222147 ATGGCGTCCGCCTCCTCAGGGCCAGCG---GCGGCGGGGTTTTCACCCCTTGATTCCGGGGTCCCTGCCGGTA------CCGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
85 s canFam1.chr17 62947719 82 + 66886099 ATGGCGTCGGCCTCCTCTGGGCCGTCG---GCGGCTGGGGTTTCATCCTTTGATCCCGGGGTCCCTTCCTGTGCTTCGGCTTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
86
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
87 a score=365854.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
88 s hg17.chr1 148078400 182 + 245522847 TCACATGATGCCGTTGGTGAGGTACTGGAAGCCGTCATAGAGTTTGGTGGTGATAGACCGCATACTGCCATCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTTCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
89 s panTro1.chr1 129830209 182 + 229575298 TCACATGATGCCGTTGGTGAGGTACTGGAAGCCGTCATAGAGTTTGGTGGTGATAGACCGCATACTGCCATCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTTCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
90 s mm5.chr3 65575311 182 - 160575607 TCACATGATGCCATTGGTGAGGTACTGGAAGCCATCGTAGAGTTTGGTGGTGATGGACCTCATGCTGCCGTCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTGCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
91 s rn3.chr2 68356506 182 - 258222147 TCACATGATGCCATTGGTGAGGTACTGGAAGCCATCGTAGAGTTTGGTGGTGATGGACCTCATGCTGCCGTCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCTCTCTTTGAGGTTGCGAATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
92 s canFam1.chr17 63050241 182 + 66886099 TCACATGATGCCATTGGTGAGGTACTGGAAGCCGTCATAGAGTTTGGTGGTGATAGACCGCATGCTGCCATCTACCATCTGCTCCACCAGCAGCTGGAGCTGCTCCTCAGTCATGCTCAT-GTGGAACCGCTCTTTGAGGTTGCGGATGGTGCTGGAGCCATGGAAGCAAGGAAGCTGAGA-AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
93 s galGal2.chrUn 96994100 182 + 165033910 TCACATGATGCCGTTGGTGAGGTACTGGAAGCCGTCGTACAGTTTGGTGGTGATGGAGCGCATGCTGCCGTCCACCATCTGCTCCACCAGCAGCTGCAGCTGCTCCTCCGTCATGTTCAT-GTGGAAGCGCTCCTTCAGGTTGCGGATGGTGCTGGAGCCGTGGAAGCAGGGGAGCTGCGA-GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
94 s fr1.chrUn 196934251 182 - 349519338 TCACATGATTCCATTTGTCAGGTACTGGAAGCCGTCGTAGAGTTTGGTCGTCAGCGACCTCATCGAGCCCTCGACCAGCTGATCGATCAGCAGCTGGAGCTGCTCCTCTGTCAGACTCAT-GTGGAAACGTTCCTTCAAACCCCGCATGGTGCTCGACCCGTGGAAACACGGCAGCTGGGA-CC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
95 s danRer1.chrNA 19436521 184 - 390413307 TCACATGATACCGTTGGTCAGATACTGGAAGCCGTCGTACAGTTTGGTAGTGATGGAGCGCATGGAGCCGTCCACCATCTGCTCCACCAGCACCTGCAGGTGCTCCTCCGATAAGTACATGGGGGAATAACTCCTTCAGGTTGCGGATAGTGCTGGAGCCATGGAAGCGAGGGAGCTGTGACAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
96
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
97 a score=172494.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
98 s hg17.chr1 148185136 140 + 245522847 ATGGAAGCGTTTTTGGGGTCGCGGTCCGGACTTTGGGCGGGGGGTCCGGCCCCAGGACAGTTTTACCGCATTCCGTCCACTCCCGATTCCTTCATGGATCCGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
99 s panTro1.chr1 129935611 140 + 229575298 ATGGAGGCGTTTTTGGGGTCGCGGTCCGGACTTTGGGCGGGGTGTCCGGCCCCAGGACAGTTTTACCGCATTCCGTCCACTCCCGATTCCTTCATGGATCCGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
100 s mm5.chr3 65694347 140 - 160575607 ATGGAAGCGTTTTGGGAGTCACGGGCTGGCCACTGGGCCGGGGGTCCGGCTCCAGGGCAGTTTTACCGCATCCCGGCCACCCCCAGCGGCCTCATGGACCCGGCGTCGGCGCCCTGCGAGGGTCCCATCACTCGGACCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
101 s rn3.chr2 68486927 140 - 258222147 ATGGAAGCGTTTTGGGAGTCACGGACTGGCCACTGGGCCGGGGGTCCGGCTCCGGGGCAGTTTTACCGCGTCCCGTCCACCCCCAGCTGCCTCATGGATCCGATGTCTGCGCCCTGCGAGGGTCCCATCACTCGGACCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
102 s canFam1.chr17 63150913 140 + 66886099 ATGGAAGCCTTTCTGGAGTCGCGGTCCAGAGTTTGGGCCGGTGGTCCCGCCCCGGGGCAGTTTTACCACATCCCGCCTAGTTCCGTCGCCTCCGTGGAGCCGGCGTTTTCTCCTTACGGGGGTCCGGTTACGCGCACGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
103
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
104 a score=69091.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
105 s hg17.chr10 55251623 116 + 135413628 TTACAGTGAAGTAGATTGACTGTGAGATTGTTTTTCAGTTCCCTCGACAATATTGTTCAAACTC--------CC------CTTGTTTTGTTCAGATGTGA----TTTCCATATTTGTTA------CTTCTGAAG-GGCACA----
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
106 s panTro1.chr8 56162651 116 + 138322177 TTACAGTGAAGTAGATTGACTGTGAGATTGTTTTTCAGTTCCCTCGACAATATTGTTCAAATTC--------TC------CTTGTTTTGTGCAAATGTGA----TTTCCATATTTGTTA------CGTCCGAAG-GGCACA----
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
107 s mm5.chr10 56176594 116 - 130633972 TTACAAAGATGTTGATTGACTGTGAGGTTGCACGTCAATTCCCTCAACAACTCTAACCAACGTT--------TC------CTGGCTCTGGTCATGTGTGA----TTTTCATGCCTGTTT------TCTCTGCAG-GGCAAA----
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
108 s rn3.chr20 14526840 116 + 55296979 TTACAAGGACGTTGACTGACTGTGAGTTTGCACGTCAATCCCTTCAACAACTCTAACCAACGTT--------TC------CTGGCTCTGGTCACATGTGA----TTTTCATGTTTGTTT------TCTCTGCAG-GACAAA----
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
109 s canFam1.chr26 4431080 116 - 41009621 TTACAGTGAAGTAGATTGACTGTGAGATTGGTTCTCCGTTTCCTCGGCAAAACTGTGCAAATTC--------CC------CTGGGGTTGTTGAGACGTCA----CGTCCACATTTTCTC------TCTCTGGAG-GGCAAC----
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
110 s galGal2.chr6 27913521 123 - 33893787 TTACAGTGCTGTCGACTGAGATGGAAAGCGTTTCTCAAGCTCCTCCACAACACAGCTCAAGTTG--------CCGTTCTGCTGGTTGTGCTCAGCTGCAG----CCTCGGGAGTTGGCA------GCTCTGGCGTTGCAAC----
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
111 s danRer1.chr12 3415306 139 + 24175710 TCACAGAACAGTGGACTGAGATGGAAAGCGTTTCTCCAGCTCCTCCACTACTGAGTTCATGCTTGGATTGGGCT------CTGATGGTGGTCCTTCTTGAGCAGGCTCCGCCTCTGTTACACCAGCCTCTGGTTCGACAGACACT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
112
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
113 a score=137977.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
114 s hg17.chr10 55251739 126 + 135413628 TAGTTTGAAGTTCTGAAACATTTGTGCGTAGA---TAGTTTTTTTCTATTTGACTGTACATGTTAG-CTACTGATTTTTCAAGTTCTGCTAAGTTTTTAACGTGTCTGAGGATGCCTTTTGGTTCTCTCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
115 s panTro1.chr8 56162767 127 + 138322177 TAGTTTGAAGTTCTGAAACATTTGTGCGTAGA---TAGTTTTTTTCTATTTGACTGTACATGTTAGACTACTGATTTTTCAAGTTCTGCTAAGTTTTTAACATGTCTGAGGATGCCTTTTGGTTCTCTCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
116 s mm5.chr10 56176710 126 - 130633972 ACGTGTGTAGTTTTGAGGGATCTGCAGGTGGG---CAGTTTTTTTCTATGTGACTGTACATGTTAG-ACACTGATTTCTCGAGCTCTGCCAAGTTTTTCACATGTCTGAGGATCCCTTTTGGATGTCTGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
117 s rn3.chr20 14526956 126 + 55296979 AGGGGTGGAGTTTTGAGAGCTCTGTGGGTGGA---CAGTTTTTCTCGATGTGACTGTACATGTTAG-ACACCGATTTCTCGAGCTCTGCCAGGTTTTTCACGTGCCTGAGGATCCCTTTGGGATGTCTGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
118 s canFam1.chr26 4431196 126 - 41009621 TTGTCTCTAGTTTCCAGCTGTGTGTTGCTGGA---AAGTTTTTTTCTATTTGACTGTACATGTTAG-CAACTGACTTTTCAAGGTCCGCTAAGTTTTTTATATGCTTGAGGATGCCCTTTGGTTGTTTCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
119 s galGal2.chr6 27913644 128 - 33893787 TGGTTTG-AGCTTAGAGATGTGCTTGGGCAGAACGTGGTTTTTGTCTATTTGGCTGTACATATTGG-CCACGGACTTTTCAATCGCTGCTAAATTCTGAATGTTTTTAAGAATACCTTTCAGCTCCCTAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
120 s fr1.chrUn 9089644 117 + 349519338 TAGGATGAAGCTTGGGCACCTT---------G---TAGTTTTTGTCTACTTGGCTGTACATGTTGG-CAATGGACCTCTCTATGTCAGCGAGATTCTGGATGTTTTTCAGGATCCCTTTGAGCTCCTTTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
121 s danRer1.chr12 3415445 124 + 24175710 -----TGCGGTTTAGGGTTGATCACTAGTGGGCGCTGCTTTTTATCTATTTGACTGTACATATTGG-CAACAGATTTCTCGATGTCTGCTATGTTCTGGAGGTTCTTAAGGATCCCCTTGAGTTCCCTCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
122
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
123 a score=13160.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
124 s hg17.chr10 55251865 17 + 135413628 GAGGGTCTGTTTTACAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
125 s panTro1.chr8 56162894 17 + 138322177 GAGGGTCTGTTTTACAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
126 s mm5.chr10 56176836 17 - 130633972 GGGGTTCTGCCCCCCAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
127 s rn3.chr20 14527082 17 + 55296979 GGGGTTCCGCCCCACAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
128 s canFam1.chr26 4431322 17 - 41009621 GGGGGTCTGTGTCACAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
129 s galGal2.chr6 27913772 17 - 33893787 GGGGAGGTGGCTCTGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
130 s fr1.chrUn 137770001 14 + 349519338 GAGGA---GTTTCGGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
131 s danRer1.chr12 3415572 17 + 24175710 GAGGCTCTGGCTCAGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
132
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
133 a score=14118.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
134 s hg17.chr10 55251882 71 + 135413628 ACTG---TCGTTGTTGATAGCTGTGTCATAGAGGACTTAATTTTCTCGGCAGGCATCAAGTTGGTCGT-GCATTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
135 s panTro1.chr8 56162911 71 + 138322177 ACTG---TCGTTGTTGATAGCTGTGTCATAGAGGACTTAATTTTCTCGGCAGGCATCATGTTGGTCGT-GCATTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
136 s mm5.chr10 56176853 71 - 130633972 TGCGGGTTGGATGCTGGTGGCTGTGTCGTA---GACGTGGTTTCTCTGGCGTGTGTGGCACTGGCAGT-GCATTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
137 s rn3.chr20 14527099 71 + 55296979 GGTGGGTTGGATGCTGGTGGCTGTGTCGTA---GACATAGTTTCTCTGGCGTGTGTGACACTGGCAGT-GCATTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
138 s canFam1.chr26 4431339 74 - 41009621 ACGGTCGTGGATGCTGGTAGCTGTGCGACAGAGGGCTCCACGTCCTCGGCAGGTGTCACACTGACAGT-GTGCTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
139 s galGal2.chr6 27913789 44 - 33893787 ACTGCGGCCGGTGGTGGTA------------------------------CAGCTGGCTGTTTGGCAGG-GGATTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
140 s fr1.chrUn 137770015 54 + 349519338 TCTGTAGTGGGAGCAGGGG--------------------GTGGTGTTGGCCGGAGAGACACTGGCCGCAGCGTT-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
141
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
142 a score=9016.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
143 s hg17.chr10 55251953 19 + 135413628 AACACCTGTTATACAGACA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
144 s panTro1.chr8 56162982 19 + 138322177 AACACCTGTTATACAGACA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
145 s mm5.chr10 56176924 19 - 130633972 AGCAGCTGGTGCAGAGATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
146 s rn3.chr20 14527170 19 + 55296979 AGCAGCTGGTGTAGAGATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
147 s canFam1.chr26 4431413 19 - 41009621 CACAACTGGTACACAGACA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
148 s fr1.chrUn 137770069 19 + 349519338 GGTGCCTCCGAAAGGGACG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
149
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
150 a score=71637.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
151 s hg17.chr10 55251972 300 + 135413628 CACTCTGTGGACAGAAATGAAGCTgaaggaggtggagggcaaggaatagaaggaggtggt---ggaggaagaggagttggaaatggaggtagaagaggtggTGTTGGGGGACCAGACGTTGAAACGGAAAGTGGAAAAAATGTaggaggaggaagaggaagagggatagaaggaggagagggaggaggacaaaaaagagaaaaaggagaaatgtcaggaggaggagcaagaggagcaggagcaggaggaggagaaggaggagaaataggaggaggagggggaaggggaCAGGCAGAAGGAGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
152 s panTro1.chr8 56163001 276 + 138322177 CTCTCTGTGGACAGAAATGAAGCTgaaggaggtggagggcaaggaatagaaggaggtggt---ggaggaagaggagttggaaatggaggtagaagaggtggTGTTGGGGGACCAGACGTTGAAATGGAAAGTGGAAAAAATG------------------------TagaaggaggagagggaggaggacaaaaaagagaaaaaggagaaatgtcaggaggaggagcaagaggagcaggagcaggaggaggagaaggaggagaaataggagaaggaggaggaaggggaCAGGCAGAAGGAGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
153 s mm5.chr10 56176943 243 - 130633972 CTGTCTGTGGATGGAATGGACGTGGAAGGAGGCTGTGGGAAGAGGCGGGGAGCTGGTGGCCGAGGAGGAGGAGGAAGTGACAGTGGAGGAGGAAGAGGTAGAGAAGAAGTAGGGGGTGTAGAAATGGGAA---GAGAAAATGTAACAAGTTGTGGGGGAGGAGGGTTAGGGGGAGAAAGGGGAAGAGG---------------------------------------AAAAGTGGTAAAGGCAATGGGAGGTCTAGG---------AAGAGGCGGATGTGGGAGGGG---------AGCAGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
154 s rn3.chr20 14527189 243 + 55296979 CTGTCTGTGGATGGGACGGAAGTGGAAGGAGGCAGTGGGAAAAGGCGGGGAGCTGGTGGTCGAGGAGGAGGAGGAAGTGATGGTGGAGGAGGAGGAGGAAGAGAAGAGGCGGGGGTTGTAGAAATGGGAA---GAGAAAATGTAAGAAGTTGGGGGCGAGGAGGGTTAGGGGAAGAAAGGGGAAGAGG---------------------------------------AAAAGTAGTAAAGGCAATAGGAGGTTGAGG---------AAGAGGCAGCTGTGGGAGGGG---------AGCAGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
155 s canFam1.chr26 4431432 195 - 41009621 CACGTAGTGGATGGAGCCCAAGACGGAGGGGACAgaggagaaggaagaggaggtgatggt---ggggggagggag---ggaagtgaaggtagaagaggtgatg------------------------------gagaagaag---------agggaggagaaggtggggtggaaagtgggagaaatgg---------------------------aggtggaggaggaagaggaggaggaggaggaggaggggcagg---------------------------tgg---------aggagAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
156
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
157 a score=139704.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
158 s hg17.chr10 55252272 227 + 135413628 ATGTTTGGTGGATGGGCAAAATTTTCAAAAATATTTCTTTCGGTTTCAATAGGTAACATA------CAAATAGGTGTCTCTCTCCTAGAGAGTGAAGAATGTAAAACACAAGGCCTT---GAAGGAGAAAGTTCCAAGGAACACTCAGCAGGAGAACTGATGACATTAGGTTCT------GATTTGAGTTCCACAGTTCTTGAAACAGTTGGCAAAGTGGAGAATGAGAAGTGAGGCCTGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
159 s panTro1.chr8 56163277 227 + 138322177 ATGTTTGGTGGATGGGCAAAATTTTCAAACATATTTCTTTCGGTTTCAACAGGTAACATA------CAAATAGGTGTCGCTCTCCTAGAGAGTGAAGAATTTAAAACACAAGGCCTT---GAAGGAGAAAGTTCCAAGGAACACTCAGCAGGAGAACTGATGACATTAGGTTCT------GATTTGAGTTCCACAGTTCTTGAAACAGTTGGCAAAGTGGAGAATGAGAAGTGAGGCCTGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
160 s mm5.chr10 56177186 230 - 130633972 ATGCTAGGTGGATGGGGAGCGATCTCAAAAGAGTTCCTTTTTGGTTCTGTATCTGATGCA------CATGTGGGAGTCTCTCTCTTAGAGCTTAAGGAGTTTAAAATACGGGGTCTCAGAGGAGGAGAAAGTTCCAAGGTGCAGTCAGCGGGAGAAGTGACCACATTAGGTTCC------GACCCGAGTTCCACCGCTCTGGAAATCGTTGGCAGAGTTGAGAAAGAAAAGTGAGACCAAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
161 s rn3.chr20 14527432 230 + 55296979 ATGCTGGGTGGATGGGGAACCATTTCAAAAGAGTTCCTTTTTGTTTCTGTATCGGAGGCA------CAAGTGGGAGTCTCTCTCTTAGAGCCTAGGGAGTTTAAAACGCGGGGTCTCCGAGGAGGAGAAAGTTCCAAGGTGCAGTCAGCGGGAGAAGTGACAACGTCAGGTTCT------GACCCGAGTTCTACCGCTCTTGAAATTGTTGGTAGAGTTGAGAAAGAAAAGTGGGACCAAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
162 s canFam1.chr26 4431627 227 - 41009621 ATGTTTGGTGGTTTGGGAAGGATTTCGAAAATGTTCCTTCCGGCTTCAACTGTCAACAGA------CATGTGGGCATCTCTCTCCTAAAAACCGGGGAATTTAAAATGCAGGGCATT---GAAGGAGAAAGTTCCAAAGAACAGTCCGCGGGAGAGATGATGACATCAGGTTCT------GCCTGGAGTTCCACAGTTCTCGAAACAGTTGTCAAAGTGGAGTAGGAGGAGTGAGACGAAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
163 s galGal2.chr6 27913978 239 - 33893787 gTTTTAGGTGGGTCTGGAATGTTTTCTGTAACTTCTCCTTTGGTCTGAGGAGCTAGAAAACTTTGGCAAACGGGTTTCTTTATCCTAAAAGACGGAGGAGTTGGCTTGCGAGTTGGT---GGAGGAGAAAGTTCTTCAGGATAGTCATGGTGAGTGATGATTACAGAGGGGACCGCAGAGGGCTCCGGCTCAACTACTTCACAAGGTGTTGGAGAGGACAGAGGAGAAGAGCGAAGGCAAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
164
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
165 a score=27341.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
166 s hg17.chr10 55252499 121 + 135413628 AAAGCAAAATG-------AAGAGTCT--G--------------------------AAGAGA------------------------------------GAGATTTCAACTGTTCTGTTCCTTCTATCATCAGTGTTTCACCTTGCCTTATTTCCTCTTTCTCTGTC-AAATTTGCCTCTTCAGTTGT--AAGCAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
167 s panTro1.chr8 56163504 121 + 138322177 AAAGCAAAATG-------AAGAGTCT--G--------------------------AAGAGA------------------------------------GAGATTTCAACTGTTCTCTTCCTTTCATAATCAGTGTGTCACCTTGCCTTATTTCCTCTTTCTCTGTC-AAATTTGCCTCTTCAGTTGT--AAGCAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
168 s mm5.chr10 56177416 118 - 130633972 GGAGGAAAAAG-------AAGAGCCA--G--------------------------AAGACA------------------------------------GAGATTTCAGCTGCTCTGTTTGCTGGACGATTAGGGTGTCTCTGTGTC---CCCCTTCTTTCTCTGAC-TCGTGGGCATCTTCAGTTGC--CAGCAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
169 s rn3.chr20 14527662 118 + 55296979 GGAGGAAAAAG-------AAGAGCCC--G--------------------------AAGACA------------------------------------GAGATTTCAGTTGCTCTGTTTGCTGTACGATTAGGGTGTCTCTGTGCC---CCCCTTCTTTCTCTGAC-CCACGGGCATCTTCGGTTGT--CACCATT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
170 s canFam1.chr26 4431854 121 - 41009621 AGAGAGAAATG-------AGGAGTCT--G--------------------------AAGACA------------------------------------GAGATTCCACATGCTGTGCTCCACGTGGGAGCAGGGGCTGGCCTGGCCTTGCTTCTCCTGTCTCGGGC-ACACTGGATTCTCCAGCTGC--AGGCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
171 s galGal2.chr6 27914217 193 - 33893787 AGAAGCAAACACACTTTTAGGAGACT--GCTCTAGCGTGTTATCTCTTTCTTGCAAACAGATGCTGTGCGTTGGTGAACGGGTGGATTTGACATCAGGAGATTTCACTTGCTTCATTTCCTGCAAAGCCTGCTGCTCAAATTGTCTTGCCTTCTCTTTTACAGTTAACGTGGGGCCACTTATTTTTTGAAATAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
172 s danRer1.chr12 3416078 117 + 24175710 AAAACAGAGAG-------AATAATTTCGG--------------------------AAGAGA------------GTGACCCAC---------------GAGAGTCCTGACCTTGCCTCAACTTTAC-------GTCCTGCAAGGCC--------TGCTGCTCAAAC-TGTCGTGCCTGCTCTTTTAC--AGTCAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
173
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
174 a score=18054.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
175 s hg17.chr10 55252620 34 + 135413628 GGATTGCTGCTACCTCTTTTGTTTGTACAGATTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
176 s panTro1.chr8 56163625 34 + 138322177 GGATTGCTGCTACCTCTTTTGTTTGTACAGATTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
177 s mm5.chr10 56177534 34 - 130633972 ACGTTGCTGCTACCTCTCTGGCTTGGGTGGCATC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
178 s rn3.chr20 14527780 34 + 55296979 AGGTTGCTGCTACCTTGCTGGCTTGGGTGGCATC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
179 s canFam1.chr26 4431975 34 - 41009621 GGGTTCCTACTACCTCTCTGGTTTGGAGGGGTTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
180 s galGal2.chr6 27914410 34 - 33893787 GGACTGCTAATATCAACTCTGCTATGCTGATTTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
181
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
182 a score=75824.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
183 s hg17.chr10 55252654 151 + 135413628 CAGTGTTTTCATTTTCAGCTTTCTGCCTGGTGCCTTG------------CCACTGCTGCAGATCTATGATCTCTGGTCTATT----TGGAACT--TTCCTCATCAGCCTCCTGGGTAAGCTGACTGACTGACTCCACAGCCTCTGAATCTTTTCTCTTGGGCCCCTCAG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
184 s panTro1.chr8 56163659 151 + 138322177 CAGTGTTTTCATTTTCAGCTTTCTGCCTGGTGCCTTG------------CCACTGCTGCAGATCTATGATCTCTGGTCTATT----TGGAACT--TTCCTCATCAGCCTCCTGGGTAAGCTGACTGACAGACTGCACAGCCTCTGAATCTTTTCTCTTGGGCCCCTCAG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
185 s mm5.chr10 56177568 151 - 130633972 TGGCGCTTTCGCATTCAGCTCTCTGATTGGTGATCTG------------CCACTCCACCAGGTCTATGGTCTCTGGCCTGTT----TGGGGCT--TTCCACATGAGCCGCCTAGGAAAGCTCACAGACTGATTCCACACCCTCTGGATCTTTTCTCTTGGGCCCCTCAG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
186 s rn3.chr20 14527814 151 + 55296979 TGGTTTTTTCGCATTCAGCTCTCTGCCTGGTGATCTG------------CCACTCCACTAGGTCTATGGTCTCTGGTCTGTT----TGGAGTT--TTCCACATCAGCCGCCTAGGAAACCTCACAGACTGATTCCACACCCTCTGGATCTTTTCTCTTGGGCCCCTCAG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
187 s canFam1.chr26 4432009 151 - 41009621 CAGGGCTTTCCTTCCCACCTTCCGGCCTGCGGCTCCT------------CCGTGGCTCCAGCTCTAGGGTTTCTGGCCTTCT----GGGAAGT--TCCCACACTGGTCTCTGAGGGAAGCACACTGGCTGATGCCATATCCTCTGAAACATTTCCCTTGGGCCCCTCAG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
188 s galGal2.chr6 27914444 139 - 33893787 CAGTTCCTTCATTCTCTGCTTTGAGTCTTTCCTGTTG------------CCACTGAACAGGGTCCATGATAACCGGCCTGCT----CAGAGAA--CCAGGCGCGTGCCTCTTAGTAACGTGAGCTGGTACTGTCCATGCACGGTGACT------------GCCTCCCAA-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
189 s danRer1.chr12 3416235 163 + 24175710 CAATCATCTCCTTGCTGTCCTTAAGGCTGGCCTTTAGCAGCTGCAGCTCCCACTGAACTGGATCCATCACCACCCTCCTACTCCGCTGAGATTCGTCCCACTTGTGCAACCGAG--AAGGTAATGTCCAG-----GAATGTCCTGAGCCTGAATTCGGGAATCCCATAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
190
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
191 a score=17919.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
192 s hg17.chr10 55252805 66 + 135413628 AGACTTACTCTTGGCTTGTATTTTGGGTGAAAATGGGTCTACAAAATC---TGTTCTCTGTGAAATGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
193 s mm5.chr10 56177719 66 - 130633972 AGACTGACTCTTAACTTGTGTTCTGGGTGCCAACAGCTCTTCAAAATC---TGTTCGTGGCTGAAGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
194 s rn3.chr20 14527965 66 + 55296979 GGACTGACTCTTAACTTGTGTTCTGGGTACAAATAGCTCTCCAAACTC---TGTTCCAGGCTGAAGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
195 s canFam1.chr26 4432160 66 - 41009621 GGACTTACTCCTGGCTTGTGTTTTGGGCAAAAATGAGTCTATAAAATC---TGTTCTTAGTAAAAAGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
196 s galGal2.chr6 27914586 69 - 33893787 GGCATCTCTCAAGACTAATTGCATAGGAGAAAGAGTATCTAGGGCATCGCTTCTTTTCCGCAGTAACCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
197 s danRer1.chr12 3416398 52 + 24175710 GGACTTACTCAGACCTCTCATACTGGGTGAATACATGTCTAAGAGGTA---ACTC--------------
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
198
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
199 a score=243755.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
200 s hg17.chr10 55252871 253 + 135413628 TGAATTTGTTGAT--------ACTTGACTTATGTTTTCCTTATAAAGGGGATTATGGGCACTTAAGTCATCCTCATCAGATAGAAATGTGAATTTTCTTGCAGACTTCAGTTTGTTGCTCTTAAGTGATCCGTCTACATGAGCTGACTTGTGAGCCTCAATAGTATTGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCCCTGCTT--------TGTTGAAAATGGTAGAGAAGGA--------AAAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
201 s panTro1.chr8 56163914 253 + 138322177 TGAATTTGTTGAT--------ACTTGACTTATGTTTTCCTTATAAAGGGGATTATGGGCACTTAAGTCATCTTCATCAGATAGAAATGTGAATTTTCTTGCAGCCTTCAGTTTGTTGCTCTTAAGTGATCCGTCTACATGAGCTGACTTGTGAGCCTCAATAGTATTGGAAGAAAAGGGCATCACAACTTGTTGATGTTTCCTGTCTTCTGAGACTGAGTTATTTCCCCTGCTT--------TGTTGAAAATGGTAGAGAAGGA--------AAATA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
202 s mm5.chr10 56177785 253 - 130633972 TGAGTTTGTTGAC--------CTTTGACCTATACTTTCCATGTAAAGGGGATTATGGGTACTTAAGTTATCCTCATCAGGAACAAATGAGAACGTCCTTGCTGGGTTAGGCTGGCTCTCCTTAAGTGGTCCCTCTACATGAGCTGGCTCATGAGACTCAGTGGTACTGGAGGAAAAGGCCATCCCATCGCGATGACTGCTCCTGTCTTCTGGGACTGAGTTATTTCCCCTGCTT--------TGTTCAAAATGGTAGAGAAGGA--------AAAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
203 s rn3.chr20 14528031 250 + 55296979 GGAATTTGTTGAC--------CTTTGACCTATACTTTCCATATAAAGGGGGTTATGGGTACTTAAGTCATCCTCATCTGGAAGAAATGAGAACGTCCTTGCTGGGTTAGCTTGGTTG---TCAAGTGGTCCCTCTACATGAGCTGGCTCATGAGACTCAGTGGTACTGGAGGAAAAGGCCATCCCGTCACGATGACTGCTCCTGTCTTCCGGGACTGGGTTATTTCCCCTGCTT--------TGTTCAAAATGGTAGAGAAGGA--------AAAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
204 s canFam1.chr26 4432226 253 - 41009621 GGAGTTTGTTGGT--------CTTGGATCTACAGCTTCCTTATAAAGAGTACTGTGGAGACTGAAGGCGTCCTCCTCAGACATCAGTGTGAACTTCCTTGCTGACTTGGGCTGGTTGTTCCTAAGGGATCCATCTACATGAGCCTGCTTGTGAGCCTCAATAGTGCTGGAAGGAAAAGGCATCACACTGTGTGGACTTTTCCTGTCTTCTGAGACTGACTTATCTCCCCTGCTT--------TGTTGGAAATGGTAGAGAAGGA--------AAAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
205 s galGal2.chr6 27914655 253 - 33893787 AGCAGCAGCAGGA--------CTTTGAGTGACACCTTCCACATACAGTGGGTTTTGAGTAGTTAGTGGGTTCTCGTCAGATAAGAAAGTAATGTTACTTGAAGATTTGGGGAGGTTATTGTTCAATGATCCATTGATATTAGATTGCTTGTGAGCCTCAATAGCACGGGAAGCAAAGCTGCTTATAACTCTCTGCCGATCTCCTTCTTCTAAGACTGACTTTTTTCCCCTGCTT--------TGTTGGAAATGGTAGAGAAGAA--------AAAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
206 s danRer1.chr12 3416450 277 + 24175710 CGATTTTGGTGCTCAGGGCTGCCAAGAGTGACATCATCACGGTACAGGGGGTTGGTTGTAGTAAGTGGGTTGTCATCTGAAAGAAAGGTAATGTTGCTCTCCGACTTGGGAAAGTTGTTGAGCAGGATTCCGTTGGCGGTGGACAGCTTGTGAGCAGTGATAGCACGGGAAGCGAATGAGCTAATGAGACGCTGCCGATCACCATCCTTCAGAACACACCTCTTAGTCCTGATTTCAGCAAGTGTGGAAAGAGATAAAGATGAACTTAACAGAGAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
207
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
208 a score=136951.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
209 s hg17.chr11 116124407 94 + 134452384 TTAC--ATATCCTCAACACTCCATTTGTAGGCAAGTTCCTCCACTGCCTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAATCCATTGGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
210 s panTro1.chr9 118123572 94 + 136640551 TTAC--ATATCCTCAACACTCCATTTGTAGGCAAGTTCCTCCACTGCCTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAATCCATTGGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
211 s mm5.chr9 77776147 94 - 124177049 TCAC--ATATCCTCCACACTCCACTTGTAGGCAAGCTCCTCCACAGCCTTCTTGCTGGCGAGCCTGGCAAAGCGCTTCTGTTCAAAGCCATTGGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
212 s rn3.chr8 79766056 94 - 129061546 TCAC--ATGTCCTCAACACTCCACTTGTAGGCAAGCTCCTCCACAGCTTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAAGCCATTGGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
213 s canFam1.chr5 72268290 94 - 92064832 TTAC--ATATCCTCAACACTCCACTTGTAGGCAAGTTCCTCCACCGCCTTCTTGCTGGCAAGCCTGGCAAAGCGCTTCTGTTCAAATCCATTGGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
214 s galGal2.chr24 4774582 96 + 5910111 TTGCGAAAGTCTTCAATGCTCCACTTGTATGCAAACTCCTGAGCTGCCTTCTTGTTGGCCATCCTGGCAAAGAACTGCTGCTCAAATCCATTGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
215 s fr1.chrUn 206483220 94 + 349519338 TCAC--ATATCTTCTACACTCCACTTATAGGCTGCCTCCTGAGCAGCTCTTTTATCTGCCATTCTCTCATAGCGTTTCTTCTCAAAACCATTTGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
216
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
217 a score=311622.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
218 s hg17.chr11 116206508 55 + 134452384 ATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTCTGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
219 s panTro1.chr9 118206938 55 + 136640551 ATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTCTGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
220 s mm5.chr9 77840023 55 - 124177049 ATGCAGCCCCGGACGCTCCTCACTGTGGCCCTCTTGGCTCTCCTGGCATCTGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
221 s canFam1.chr5 72342544 55 - 92064832 ATGCAGCCCCGGGTCCTCCTCGTCGCTGCCCTCCTGGCGCTCCTGGCCTCCGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
222
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
223 a score=21699.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
224 s hg17.chr11 116211733 24 + 134452384 TCACTGGGTGTTGAGCTTCTTAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
225 s panTro1.chr9 118212083 24 + 136640551 TCACTGGGTGTTGAGCTTCTTAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
226 s mm5.chr9 77844334 24 - 124177049 TCACTGGGCAGTCAGAGTCTCGCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
227 s canFam1.chr5 72346944 24 - 92064832 TCACTGCGCGTTCAGCTTCTTGGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
228
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
229 a score=166504.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
230 s hg17.chr11 116211757 354 + 134452384 GTACTCCTCGAGAGCGCTCAGG---------AAGCTGACCTTGAAGCTCTCCAGCACGGGCAGC-AGGCCTTGGCGGAGGTCCTCGAGCGCGGGCTTGGCCTTCTCGCTGAGCGTGCTCAGATGCTCGGTGGCCTTGGCGTGGTACTCGGCCAGTCTGGCGCCGCCGTTCTCCTTGAGAGCCTCAAGGCGCGCGGCCAAGCGCTGGCGCAGCTCGTCGCTGTAGGGGGCCAGATGCGTGCGCAGCGCGTCCACATGGGCGCGCGCGCGGTCGCGCATCTCCTCGCCCAGTGGGCTCAGCTTCTCTTGCAGCTCGTGCAGCTTCTGGCGCGCGCCCTCTTGGAGCTCTGCGCGCAGCGGCTCCAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
231 s panTro1.chr9 118212107 354 + 136640551 GTACTCCTCGAGAGCGCTCAGG---------AAGCTGACCTTGAAGCTCTCCAGCACGGGCAGC-AGGCCCTGGCGGAGGTCCTCGAGCGCGGGCTTGGCCTTCTCGCTGAGCGTGCTCAGATGCTCGGTGGCCTTGGCGTGGTACTCGGCCAGTCTGGCGCCGCCGTTCTCCTTGAGAGCCTCAAGGCGCGCGGCCAAGCGCTGGCGCAGCTCGTCGCTGTAGGGGGCCAGATGCGTGCGCAGCGCGTCCACATGGGCGCGCGCGCGGTCGCGCATCTCCTCGCCCAGTGGGCTCAGCTTCTCTTGCAGCTCGTGCAGCTTCTGGCGCGCGCCCTCTTGGAGCTCGGCGCGCAGCGGCTCCAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
232 s mm5.chr9 77844358 348 - 124177049 GGCCTTGTCGATCACACTCTGG---------ACTTGGGTCTTAAGCGTCTCCAGCATGGGCATC-AGACTATGGCGCAGGTCCTCCAGCGCAGGTCTGGCTTTCTCGCCAAGTGTCTTCAGGTGGGTTTTGGCCCTGGTGTGGTACTCGTTCAAGGTAGGGTTGC------TCTTGAGCTCAGCCAGGCGCTGGGCCAGGCTCTCGCGCATCTGTTCGCTGTGGGGCGCTAGCTGTGTGCGCAGAGAGTCTACGTGTGTGCGCATGCGGTCGCGAAATTCCTCAGCCACAGGGGACAGTCTCCCTTGCAGCTCCTGCAGCTTCTGGCGCGCGCTCTCCTGCAGCTCGGCGCCCAGAGGCGCCAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
233 s canFam1.chr5 72346968 354 - 92064832 GGCCTCGTCGATGGCAGCCAGC---------AGGCTGACCTTGAAGCTCTCCAGCACGGGCAGC-AGGCCCTGGCGCAGGTCCTCGAGCGCGGGCCTGGCCTTCTCGCCGAGCGCGCTCAGCTGCTCGCTGGCCCTGGCGTGGTACTCGGCCAGGCTGGCGCCGCCGCCCTCCTTGAGCGCCTGCAGCCGCGCGGCCAGGCGCTCGCGCAGGTCGTCGCTGTAGGGGGCCAGCTGGGCGCGCAGCGCGTCCACGTGGGTGCGCGCGCGGTCCCGCAGCTCCTCGCCCAGCGGGCTCAGCTTCTCCTGCAGCTCCTGCAGCTTCTGGCGCGCGCCCTCGCGCAGCTCCGAGCCCAGCGGCGCCAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
234 s galGal2.chr24 4799439 363 + 5910111 GGACTTCTGGAGTTCGTCCAGGAAGGAGATCAAGCGGTTCTTGAGGTTCT-CAGCATAGGGGGTGAGGCGCTCCCTGAATTCCTGCACCAGAGGCGTCATCTTCTCACGCAGGTTGCTGAGCTGCTCCATCACCTTGGCCTGGTACTCGGAAGCCTGGGGGATGCCCTTCTCGCGGATCTCCTCCAGCTTCTGGCTCAGCTTCTGCCGCAGCTCATCGCTGTATGGCGCCAGGTTCTTGCGCAGCTCCTCCACGTGCCCACGCAGACGATCCCGCGCCTCCTCAGCCACCGGGGTCAGCTTGGCCTGCATCAGCTCCACCTTCTGCTTGGTGAGCTCCTTCAGCTCCTGAGCCACGGGCGTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
235
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
236 a score=84013.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
237 s hg17.chr11 116212111 105 + 134452384 CTTCTGGCGGTAGAGCTCCATCTCCTCCTGCCACTTCTTCTGGAAGTCGTCCAGGTAGGGCTGCACCTTGGCCTTCACCTCCTCCAGATCCTTGCTCATCTCCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
238 s panTro1.chr9 118212461 105 + 136640551 CTTCTGGCGGTAGAGCTCCATCTCCTCCTGCCACTTCTTCTGGAAGTCGTCCAGGTAGGGCTGCACCTTGGCCTTCACCTCCTCCAGATCCTTGCTCATCTCCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
239 s mm5.chr9 77844706 105 - 124177049 CTTCTGGCGGTAGAGCTCCACATCCTCTTTCCATTTCTTCTGGAATTCGTCCAGGTAGGGCTGCACCTTCTGTTTCACTTCCTCTAGGTCCTTGTTCATCTCCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
240 s rn3.chr2 192507462 102 + 258222147 CTCCTCTCGGAAATGCACGATCTCATCCTGC---TTCTCCTGCAAGTCTTCCAGAAGCTGCCGCCGCTCAGCCTTCTGCTGCTCCAGCTCCTTCTCCAGCTCCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
241 s canFam1.chr5 72347322 105 - 92064832 CTTCTGGCGGTACAGCTCCACCTCCTCCTGCCACTTCTTCTGGAAGTCGTCCAGGTAGGGCTGCACCTTCTGCTTCACCTCCTCCAGGTCCTTGCTCATCTCCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
242 s galGal2.chr24 4799802 105 + 5910111 GCGCTGGCGGTACTGCTCCAGCTCCTCCGTCCACTTGGCGGAGAACTGGTCCAGGAAGGGCCGGATCTTCTCCTTCACCTCCTCCAGGTCCTTGGTCAGCTCAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
243
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
244 a score=57194.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
245 s hg17.chr11 116212216 121 + 134452384 CCTCAGGCCCTCTGTCTCCTTTTCCAGGTTATCCCAGAACTCCTGGGTCACAGGGCCGAGCTGTTCGCGCAGCTTGCTGAAGGTGGAGGTCACGCTGTCCCAGTTGTCAAGGAGCTTTAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
246 s panTro1.chr9 118212566 121 + 136640551 CCTCAGGCCCTCTGTCTCCTTTTCCAGGTTATCCCAGAACTCCTGGGTCACAGGGCCGAGCTGTTCGCGCAGCTTGCTGAAGGTGGAGGTCACGCTGTCCCAGTTGTCAAGGAGCTTTAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
247 s mm5.chr9 77844811 121 - 124177049 TCTCACCCAATCTGTTTCTTTCTCCAGGTTATCCCAGAAGTCCCGAGTCAATGGGCCCAGCCGTTCCTGCAGCTGACTAACGGTTGAACCCAGAGTGTCCCAGTTTTCCAGGAGATTCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
248 s canFam1.chr5 72347427 121 - 92064832 CCGCAGCACCTCCGTCTCCTTCTCCAGGTTATCCCAGAACTCCTGCGTGACCGGGCCGATCTGTTCGCGCAGCTTGGTCACCGTGCTGCTCAGGCTGTCCCAGTTGTCCAGGAGTTTCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
249 s galGal2.chr24 4799907 121 + 5910111 ACGCAGAGCCTCGGTGTCCTTCAGCCACATCTCGCGCACCTCCTTGTAGTAGGGAGCCATGTCCTCACGCAGCTTGGCAGCCGCGGCACTCAGCGTGTCCAGGTTGTCAGCCAGCTTCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
250
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
251 a score=4872.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
252 s hg17.chr11 1812377 30 + 134452384 ATGCTCCACCTGCATGGCTG--------------GCAAACCATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
253 s panTro1.chr9 2001217 30 + 136640551 ATGCTCCACCTGTATGGCTG--------------GCAAACCACG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
254 s mm5.chr7 130142453 26 + 133051633 -----CCAACTGGACTACCGT-------------GTAGAAGATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
255 s rn3.chr1 202843225 26 + 268121971 -----CCAACTAGACTGCCTT-------------GTAGAAGATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
256 s canFam1.chr18 56425269 44 + 66173745 AGGCTCCACCTGTGTGACTCCACCCGTGTGACCGACAAACCATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
257 s danRer1.chrNA 165962846 24 - 390413307 -----AGTTCAGGAAGTCCA--------------GGAAGAGA-G
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
258
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
259 a score=333744.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
260 s hg17.chr12 38440094 227 + 132449811 TTATTCCACATCAGAAGCATCATTGTCAGAAAGATGATAGTTACTTCCCTTTACCCGAATATATTCAATATATCTCCCTTCATCAGAATCTG---AAGTGCCACATGTACATAGCCTGTTGTCAAAGAGTGATTCAATTTCCTCTAATTTTTTGCCTTTGGTCTCAGGAAGACAGCCATAGATGAAAAGGAGTCCCACAGCAGCAAATCCAGCATAGAGGAAGAAAGCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
261 s panTro1.chr10 39016533 227 + 135301796 TTATTCCACATCAGAAGCATCATTGTCAGAAAGATGATAGTTACTTCCCTTTACCCGAATATATTCAATATATCTCCCTTCATCAGAATCTG---AAGTGCCACATGTACATAGCCTGTTGTCAAAGAGTGATTCAATTTCCTCTAATTTTTTGCCTTTGGTCTCAGGAAGACAGCCGTAGACGAAAAGGAGTCCCACAGCAGCAAATCCAGCATAGAGGAAGAAAGCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
262 s mm5.chr15 91666098 227 + 104138553 TTACTCCACGTCAGAAGCGTCGTTGTCGGAGAGATGATAGTTGCTTCCCTTCACGCGGATGTACTCAATGTACCTCCCTTCATCCGAGTCGG---CAGCGCCACATGAACATAGCCGGTGGTCAAAGAGCGATTCGATTTCCTCCAATTTTTTCCCCTTGGTTTCAGGGAGGCAGCCATAGACAAAAAGCAGTCCCACAGCGGCGAATCCGGCGTAGAGGAAGAATGCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
263 s rn3.chr7 129719269 227 + 143082968 TCACTCCACGTCCGAGGCGTCGTTGTCGGAGAGATGGTAGTTACTTCCCTTCACGCGGATGTACTCGATGTACCTGCCCTCGTCCGAGTCCG---CGGTGCCGCAGGTGCACAGCCGGTGGTCGAAGAGCGATTCGATTTCCTCTAGTTTTTTCCCTTTGGTTTCAGGAAGACAGCCATAGACGAAAAGCAGTCCCACAGCGGCGAATCCGGCGTAGAGGAAGAACGCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
264 s canFam1.chr27 32235556 227 - 49087461 TTATTCCACATCAGAAGCATCGTTGTCAGAAAGATGATAGTTACTTCCCTTCACCCGAATATATTCAATATATCGCCCTTCATCAGAATCTG---AAGCACCACATGTACATAACCTGTTGTCAAAGAGTGATTCAATTTCCTCTAATTTTTTCCCTTTGGTCTCAGGAAGACAGCCATAGATGAAAAGGAGTCCCACACCAGCGAATCCAGCATACAGGAAGAAGGCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
265 s galGal2.chr1 179729132 227 - 188239860 TTATTCCACATCAGAAGCATCATTGTCAGAAAGATGGTAATTACTTCCCTTCACCCGAATATATTCAATATACCTCCCTTCATCAGAATCTG---ACATACCACATGTACATAGCCTGCTTTCAAACAAAGATTCAATTTCCTCTAGTTTTTTCCCTTTAGTCTCAGGAAGGCAGCCATAGATGAAAAGGAGTCCCAGGCCAGCAAACCCTGCGTACAGAAAGAAGGCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
266 s fr1.chrUn 213944794 227 + 349519338 CTAGTCCACATCAGAGGCGTCGCTCTCAGACAGGCGGTAGTTGCTGCCCTTTACCCGGATGTACTGCACGTTCCGGCGGTCGTTGCGGGAGG---AGGCTCCGCAGGAGCAGAGCGGACCGGAGAACAGGCTCTCGATGTCCTCCAGCTGCAGGCCCTGGGTCTCCGGGAGGCAGCCCAGGATGAAGAAGAGGCCCAGCACCACCAGGCCAGCGTACATGAAGAACGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
267 s danRer1.chrUn 27538197 206 + 367113659 TCACTCCTCCTCATCCTCGTCTTCATCAGAG---CGGGAGTTTCCTCCGTTTACCCGCATGTACT---------------------GATCTGTGTGGGCTCCGCAGCTGCAGAGTCGCCTGCTGAACAGAGACTCGATCTCCTCCAAGCGCAAACCCTTGGTCTCCGGCAGACACCCCGACACGAACACGAAGCCCAGCAGAGCCAGAGCAGCGTACAGGAAAAACGCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
268
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
269 a score=115495.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
270 s hg17.chr13 112381694 259 + 114142980 ATGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTACCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGAAGATGGACCCGGCAGGTCTGGAGGGAGG-CCCCCGTGATGAATCCCG-TGATGAGCCGCCGATCCGAGCTCAGGCTGCGTCATGGGACCAGCCACAAGGTTGCCTGACC-TATAAAGGTCGCAGGAGTGCCTCAGGGACACAGAAGCAGTTACAGCTGCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
271 s panTro1.chr14 95994697 259 + 97804244 ATGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTACCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGAAGATGGACCCGGCAGGTCTGGAGGGAGG-CCCCTGTGATGAATCCCG-TGATGAGCCGCTGATCCGAGCTCGGGCTGCGTCATGGGACCAGCCACAAGGTTGCCTGACC-TATAAAGGTCACAGGAGTGCCTCAGGGAGACAGAAGCAGTTACAGCTGTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
272 s mm5.chr8 12764663 188 + 128688707 ATTTGTTCACCAGAG----TGTCCTGGCCTCCTGCCTATGTGGACTCATTCCCAAGG-ACCAGCCT-TGAAGGACGCA---ATGTAGGGCTCC---------ATGGA------------GGAGGGAGG-TCTGTGTGACA-----------------------------------------CTGGGACTTGCCACAGGTCAG--TGATTGTTCAGAGGTCACAGGAGTGCCACCCTCAGGCAGAGTCATCTGTCTTTTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
273 s rn3.chr16 8607378 190 - 90224819 ATCCATTTACCAGAG----CGACCTGGCCTCCTGCCTAGGGGGGCTCATTCCCAAGG-ACCGGTCT-TGAAGGGTGTA---TTATATGGTTTC---------ATGAA-----------GGGAGGGAGG-TCTGTGTGACC----------CTGGGACACCGCT------------------------------ACAGGTCAG--TGATTGTTCGGAAGTCACAGGAATGCCACCCTCAGGAAGAGTTATCTATCTTTTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
274 s canFam1.chr22 63116876 177 + 64236280 A------------------TGTGCTGGTCTGCTCAGGGCAGGAGCTCTTCGCCGGAT-GTCAGTCC-CGA--GACGCACATGCCTGGGCTTCT-------------CCCTCACAGGACTGCAGCAAGGACCACCACGGTGGACACTGAGGAGGCCCCGCCAGGCCGA----------------GGGATGGAGGAGAGGCCAT--CGATG------GAGCAGCATGGGGTCGTCAT--------------------------G
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
275
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
276 a score=694393.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
277 s hg17.chr14 98710240 325 + 106368585 TTAGCTCCTCTCGGCCTGCTCGATTTTGACGTCGTTAGTCAGCAAGTGCTCGCCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCGCCGGTGCACCGTCAAGTTGCTGCAGTTCTTGAACACCTTGCCGCAGTACTCGCACGTGTCGCTGCGGCGGCCCTCCTTGGAGCTg
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
278 s panTro1.chr15 99208107 324 + 106954593 TTAGCTCCTCTCGGCCTGCTCGATTTTGACGTCGTTAGTCAGCAAGTGCTCGCCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTA-GGCCGCTCGCCGGTGTGGCTCCGCCGGTGCACCGTCAAGTTGCTGCAGTTCTTGAACACCTTGCCGCAGTACTCGCACGTGTCGCTGCGGCGGCCCTCCTTGGAGCTg
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
279 s mm5.chr12 102664235 325 + 115071072 TTAGCTCCTCTCAGCCTGCTCGATTTTGACATCATTAGTCAGCAAGTGTTCACCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCTCCGGTGCACCGTCAGGTTGCTACAGTTCTTGAAGACCTTGCCGCAGTACTCACATGTGTCGCTGCGGCGGCCCTCCTTGGAGCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
280 s rn3.chr6 132299612 325 + 147642806 TTAGCTCCTCTCAGCCTGCTCGATTTTGACATCATTAGTCAGCAAGTGTTCACCGTGCCACTTTTTCATGTGTTTCTCCAGGGTACTGTAGACACTGAAGGGCATCTGGCAGATATCGCAGCGGTACACCTCCTTGCCGATCTGACCGTGCGTCTTCATGTGGCGCGTAAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCTCCGGTGCACCGTCAGGTTGCTACAGTTTTTGAAGACCTTGCCGCAGTACTCGCACGTGTCGCTGCGGCGGCCCTCCTTGGAGCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
281 s canFam1.chr8 70559093 325 + 77374719 TTAGCTCCTCTCGGCCTGCTCGATTTTGACGTCGTTAGTCAGCAAGTGCTCGCCGTGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAGACGCTGAAGGGCATCTGGCAGATGTCGCAGCGGTACACCTCCTTGCCGATCTGCCCGTGCGTCTTCATGTGGCGCGTGAGCTTGCTGCTCTGCGCGCACGCGTAGTTGCACAGCTCGCACTTGTAAGGCCGCTCGCCGGTGTGGCTCCGCCGGTGCACCGTCAGGTTGCTGCAGTTCTTGAACACCTTGCCGCAGTACTCGCACGTGTCGCTGCGCCGGCCCTCCTTGGAGCTc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
282 s galGal2.chr5 44593849 325 + 56310377 TTAGCTTCTTTCTGCCTGCTCAATTTTGACGTCATTTGTCAGCAAATGTTCTCCATGCCACTTTTTCATGTGTTTCTCCAGGGTGCTGTAAACACTGAAGGGCATCTGGCAAATGTCGCAGCGGTAGACCTCCTTCCCTATCTGGCCATGCGTTTTCATGTGACGCGTCAGCTTACTGCTCTGGGCACATGCATAGTTGCAGAGCTCGCATTTGTAAGGCCGCTCTCCAGTGTGGCTCCGACGGTGCACCGTCAAATTGCTGCAGTTCTTAAAGACCTTGCCACAGTACTCACATGTATCGCTCCTGCGCCCTTCCTTCGAGCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
283 s fr1.chrUn 275909939 325 + 349519338 TTACACCGTCTCTGCTTGTTCCAGTTTGATGTCATTGGTCATCAAATGTTCTCCATGCCACTTTTTCATGTGTTTCTCCAGAGTGCTGTACACACTGAAAGGCATTTGGCAAATGTCACAACGAAAGACCTCCTTACCAAGCTGGCCATGCGTCTTCATGTGGCGCGTTAGCTTTGAGCTCTGGGCACACGCGTAGTTGCACAGCTCACACTTGTAGGGCCTCTCACCCGTGTGACTGCGTCGGTGCACTGTCAGGTTGCTGCAGTTTTTAAAAACTTTGCCACAGAACTCACAGGTGTCAGACCGCCGGCTGTCCTTTGAGCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
284 s danRer1.chrUn 103629515 325 + 367113659 TTAGCTTCTCTCTGCTTGTTCAATTTTGACCTCATTCGTCATCAAATGTTCCCCATGCCACTTTTTCATGTGTTTCTCAAGCGTGCTGTAGACGCTGAAGGGCATTTGGCAAATGTCACAGCGGTACACTTCCTTACCGAGCTGGCCGTGTGTCTTCATGTGGCGGGTGAGCTTGCTGCTCTGGGCGCAGGCGTAGTTACAAAGCTCACACTTGTAGGGCCTCTCGCCTGTGTGGCTGCGTCTGTGCACTGTCAGATTGCTACAGTTCTTGAACACCTTCCCACAGTACTCACAGGTGTCACTCCTCCGGCTCTCTTTCGAGCTA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
285
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
286 a score=20235.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
287 s hg17.chr14 98710565 24 + 106368585 ggccgcccggggcccgggccgccc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
288 s panTro1.chr15 99208431 24 + 106954593 ggccgcccggggcccgggccgccc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
289 s mm5.chr12 102664560 24 + 115071072 GGCCTCCCAGGACCCGGACCACCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
290 s rn3.chr6 132299937 24 + 147642806 GGCCGCCCAGGACCCGGGCCACCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
291 s canFam1.chr8 70559418 24 + 77374719 ggccgcccggggcccgggccgccc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
292
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
293 a score=4011.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
294 s hg17.chr14 98710589 2 + 106368585 AG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
295 s panTro1.chr15 99208455 2 + 106954593 AG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
296 s mm5.chr12 102664584 2 + 115071072 AG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
297 s rn3.chr6 132299961 2 + 147642806 AG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
298 s canFam1.chr8 70559442 2 + 77374719 AG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
299 s fr1.chrUn 275910285 2 + 349519338 AG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
300 s danRer1.chrUn 103629867 2 + 367113659 AG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
301
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
302 a score=517186.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
303 s hg17.chr14 98710591 277 + 106368585 GTGCGGGGTGCTGCCTCCGCTGGCCGTGCCGCTGCGGCCCGAGAGGCCGCCGTCCAGCAGGTCCCCGGGCGGCGTGGAGAAGCGCAGGCTGCCGTTCTCGGACGAGTGCTCGGACGACGTGGCGAAGGGCGACTGTCGTGCGTCCGTGAAGCCCAGGAAGGGGTCCTTCATGAAGTGCCGCGACGCCGCGTAGCCCACCAGCCACTGCGAGTACACGTTCTCGGACGGGATGAGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
304 s panTro1.chr15 99208457 277 + 106954593 GTGCGGGGTGCTGCCCCCGCTGGCCGTGCCGCTGCGGCCCGAGAGGCCGCCGTCCAGCAGGTCCCCGGGCGGCGTGGAGAAGCGCAGGCTGCCGTTCTCGGACGAGTGCTCGGACGACGTGGCGAAGGGCGACTGTCGTGCGTCCGTGAAGCCCAGGAAGGGGTCCTTCATGAAGTGCCGCGACGCCGCGTAGCCCACCAGCCACTGCGAGTACACGTTCTCGGACGGGATGAGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
305 s mm5.chr12 102664586 277 + 115071072 GTGAGGTGTGCTGCCCCCGCTCGCCGTGCCACTGCGCCCGGACAGCCCGCCGTCCAGCAGGTCCCCGGGTGGCGTTGAGAAGCGCAGGCTGCCGTTCTCAGAGGAATGTTCCGACGATGTGGCGAAAGGCGACTGGCGCGCATCCGTGAAGCCCAGGAATGGGTCCTTCATGAAGTGGCGCGATGCTGCGTAGCCCACGAGCCACTGCGAGTACACGTTCTCAGATGGGATGAGGGCGGCAGGTGGCAGCTCCAGGTCTTTCTCCACCTTGATGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
306 s rn3.chr6 132299963 277 + 147642806 GTGAGGCGTGCTGCCCCCGCTCGCCGTGCCACTGCGCCCCGACAGCCCGCCGTCCAGCAGGTCCCCGGGTGGCGTGGAGAAGCGCAGGCTGCCGTTCTCAGAGGAATGTTCCGACGACGTGGCGAAAGGCGACTGGCGCGCATCCGTGAAGCCCAGGAACGGGTCCTTCATGAAGTGGCGCGACGCCGCGTAGCCCACGAGCCACTGCGAGTACACGTTCTCGGATGGGATGAGGGCGGCGGGTGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
307 s canFam1.chr8 70559444 277 + 77374719 GTGCGGCGTGCTGCCCCCGCTGGCCGTGCCGCTGCGGCCCGACAGCCCGCCGTCCAGCAGGTCCCCGGGCGGCGTGGAGAAGCGCAGGCTGCCGTTCTCGGACGAGTGCTCGGACGACGTGGCGAAGGGCGACTGGCGCGCGTCCGTGAAGCCCAGGAACGGGTCCTTCATGAAGTGCCGCGACGCGGCGTAGCCCACGAGCCACTGCGAGTACACGTTCTCGGACGGGATGAGCGCGGCGGGCGGCAGCTCCAGGTCCTTCTCCACCTTGATGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
308 s galGal2.chr5 44594200 277 + 56310377 GTGGGGGGTGCTGCCTCCGGAGGCCGTGCCGCTGCGCCCTGAGAGCCCCCCATCCAGCATGTCCCCCGGCGGGGTGGAGAAACGCAGGCTCCCATTCTCCGACGAATGCTCGGAAGAGGTGGCGAAGGGAGATTGTCGGGAGTCTGTGAATCCTAGAAACGGATCCTTCATGAAGTGCCTTGATGCCGCGTACCCTACCAGCCACTGGGAGTAAACATTTTCGGAAGGTATTATTGTTGCTGGTGGCAAGTCCAAATCTTTCTCAACTTTTATTCGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
309 s fr1.chrUn 275910287 277 + 349519338 GTGAGGCGTGCTGCCTCCACTTGCGGTCCCACTACGGCCCGACAAGCCACCGTCCATCAGGTCTCCTGGGGGCGTGGAGAAGCGCAGGCTTCCATTTTCAGAGGAGTGCTCCGATGAAGTGCCGAAGGGAGATTGTCTCGAGTCACTGAAGCCTAGAAAAGGGTCTTTTATGAAATGGCGAGAGGCAGCATAGCCCACTAACCACTGGGAGTAGACATTTTCAGAGGGTATGAGGGGTGCCGGGGAACCATCCCCGTCCTTCTCTGTCTTTATCCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
310 s danRer1.chrUn 103629869 277 + 367113659 GTGCGGGGTGCTGCCTCCGCTAGCAGTACCACTGCGGCCGGAGAGGCCCCCGTCCAGCAGGTCCCCTGGCGGCGTAGAGAATCGCAAGCTTCCGTTCTCGGAGGAGTGTTCCGAGGAGGTGGCGAATGGAGATTGTCTGGAGTCGGTGAAGCCAAGGAAAGGATCTTTGATGAAGTGGCGGGATGCTGCATAGCCCACCAGCCACTGGGAGTAGACATTTTCAGATGGGATTAGGGGGGCTGGGGGTATGTCCAAATCCTTTTCAATTTTGATCCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
311
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
312 a score=56079.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
313 s hg17.chr14 98710868 71 + 106368585 TTG------------GCGGCG---CTGTTGAGCCCGGGGCTGGGCAGCGGCGCGGGCTTGCGCGGGAAGAGCCCGGGGAAGGG---------------------------------------CTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
314 s panTro1.chr15 99208734 71 + 106954593 TTG------------GCGGAG---CTGTTGAGCCCGGGGCTGGGCAGCGGCGCGGGCTTGCGCGGGAAGAGCCCGGGGAAGGG---------------------------------------CTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
315 s mm5.chr12 102664863 83 + 115071072 TTGGCCGCGTGCAGCGCGGGA---CCACCGAGCCCAGGGCTGGGCAGCGGTGCTGGCTTGCGTGGGAAGAGAGCTGGAAAGGG---------------------------------------CTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
316 s rn3.chr6 132300240 83 + 147642806 TTGGCCGCGTGTAGCGCAGGA---CCACCAAGCCCCGGGCTGGGCAGCGGTGCGGGCTTGCGTGGGAAGAGCGCTGGGAAGGG---------------------------------------CTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
317 s canFam1.chr8 70559721 71 + 77374719 TTG------------GCCGCG---CTGTTGAGCCCGGGGCTGGGCAGCGGCGCCGGCTTGCGCGGGAACAGCCCCGGGAAGGG---------------------------------------CTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
318 s galGal2.chr5 44594477 110 + 56310377 TTA------------GATGAG---TTATTTAAGCTGGGGCTTGTGATAGGTGTTGGCTTCCGAGGGAACAAGTTTGGGAAGGGCTCGCCTGGGCCAAAGTTTCTTCCATTGACTGTCCCCTCCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
319 s fr1.chrUn 275910564 85 + 349519338 TTACTC---------ATGGAG---TTAGCCAGGCCAGAACCAGCGACGGAAGCGGGTTTGTAGGGAAATAAGCTTGGAAGAGA----------------------------ATCATCCGATCCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
320 s danRer1.chr5 4282954 74 + 40038624 TTG------------GCGGAAGATCCAGAGAGGCTGGAGCTGGAAATGGGCATTGGCTTACGATGGAACATCGCAGAGATGGA---------------------------------------ATC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
321
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
322 a score=4995.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
323 s hg17.chr14 98710939 5 + 106368585 GGTGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
324 s panTro1.chr15 99208805 5 + 106954593 GGTGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
325 s mm5.chr12 102664946 5 + 115071072 TGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
326 s rn3.chr6 132300323 5 + 147642806 TGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
327 s canFam1.chr8 70559792 5 + 77374719 GGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
328 s galGal2.chr5 44594587 5 + 56310377 GGTGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
329 s fr1.chrUn 275910649 5 + 349519338 TGTTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
330
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
331 a score=9825.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
332 s hg17.chr14 98710944 10 + 106368585 CTGGCGCGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
333 s panTro1.chr15 99208810 10 + 106954593 CTGGCGCGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
334 s mm5.chr12 102664951 10 + 115071072 CTGGCGCGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
335 s rn3.chr6 132300328 10 + 147642806 CTGGCGCGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
336 s canFam1.chr8 70559797 10 + 77374719 CCGGTGCGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
337 s fr1.chrUn 275910654 10 + 349519338 CTGCCATTAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
338
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
339 a score=42070.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
340 s hg17.chr14 98710954 72 + 106368585 Gccgcccccgcgcccgttgaccgcgccgcccgcgcccgcgtccccgcagccgcccgcgtcgtcgtcgtcgcc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
341 s panTro1.chr15 99208820 72 + 106954593 Gccgcccccgcgcccgttgaccgcgccgcccgcgcccgcgtccccgcagccgcccgcgtcgtcgtcgtcgcc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
342 s mm5.chr12 102664961 69 + 115071072 GGCCCCGCCGCGCCCGTTCACTGCACCCGGTGCACCCGCGTCCCCACAGCCAACAG---CTCCGGCATCACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
343 s rn3.chr6 132300338 69 + 147642806 GGCCCCGCCACGCCCGTTCACTGCGCCCGGTGCACCTGCATCCCCGCAGCCACCAG---CTCCGGTGTCACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
344 s canFam1.chr8 70559807 72 + 77374719 gccgccgccgcgcctgttgaccgcgccgccggtgcccgcgtccccgcagccgcccgcgtcgtcgtcgtcgcc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
345
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
346 a score=1846.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
347 s hg17.chr14 98711026 19 + 106368585 cgcgtccccgccgcccgcc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
348 s panTro1.chr15 99208892 19 + 106954593 cgcgtccccgccgcccgcc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
349 s mm5.chr12 102665030 10 + 115071072 CGTGTCGC---------CT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
350 s rn3.chr6 132300407 10 + 147642806 CGCGTCGC---------CT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
351 s canFam1.chr10 63975552 18 + 72717409 AGTGTCCCTGTGGGCC-TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
352
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
353 a score=1381.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
354 s hg17.chr14 98711045 5 + 106368585 GCACG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
355 s panTro1.chr15 99208911 5 + 106954593 GCACG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
356 s mm5.chr12 102665040 5 + 115071072 GCACG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
357 s rn3.chr6 132300417 5 + 147642806 GCACG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
358 s canFam1.chr10 63975570 2 + 72717409 G---G
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
359 s fr1.chrUn 86333360 5 + 349519338 GGATA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
360
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
361 a score=13475.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
362 s hg17.chr14 98711050 19 + 106368585 CTTCAGGAAGGC-GCCGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
363 s panTro1.chr15 99208916 19 + 106954593 CTTCAGGAAGGC-GCCGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
364 s mm5.chr12 102665045 19 + 115071072 CTTCAGGAAGGC-GCCCCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
365 s rn3.chr6 132300422 19 + 147642806 CTTCAGGAAGGC-GCCTCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
366 s canFam1.chr10 63975572 20 + 72717409 CCTCGGCCAGGTGGCCGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
367 s galGal2.chr5 44594680 19 + 56310377 TTTCATGAAGCT-ACTCCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
368 s fr1.chrUn 86333368 19 + 349519338 CCCGGTGAAGTC-GTGCTGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
369
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
370 a score=43602.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
371 s hg17.chr14 98711069 105 + 106368585 TTCTGCTTGTCGGCCAGGA---------------------GCTCGCCGTAC-TGCGGCAGTGCGCCTAGGCCCACGTTCTCCATGACCTTGCCCAGCACCAGCGCCTTCTCGTCAGCCAGCGCCTTg-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
372 s panTro1.chr15 99208935 105 + 106954593 TTCTGCTTGTCGGCCAGGA---------------------GCTCGCCGTAC-TGCGGCAGTGCGCCTAGGCCCACGTTCTCCATGACCTTGCCCAGCACCAGCGCCTTCTCGTCAGCCAGCGCCTTg-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
373 s mm5.chr12 102665064 87 + 115071072 TT---------------------------------------CTCCCCATAC-TGCGGCAGTGCGCCCAGCCCTGCGTCCTCCATCACCTTGCCCAGGGCCAGAGCCTTCTCATCCGCCAGAGCCGCA-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
374 s rn3.chr6 132300441 87 + 147642806 TT---------------------------------------CTCCCCATAC-TGCGGCAGTGCGCCCAGCCCTGCGTCCTCCATCACCTTGCCCAATGCCAGCGCCTTCTCATCTGCCAGAGCCGCA-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
375 s canFam1.chr10 63975592 92 + 72717409 TTATGCTTCTCGCCCAGGA---------CCTGGTGGAAGGCCTCGCTGAAG-TGCTGCATGGAGCTGAGCACCATGCCCTGCATGACCTCGGGCAGCG-------------------------CGCG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
376 s galGal2.chr5 44594699 105 + 56310377 TTCTGTTTCTCAGCTAGCA---------------------TGTCATTGTAT-TGCTGGATGGCACCGAGACTTACATTCTCTATCACTTTTCCCAGGACAAGGGATTTCTCATCTGGCAGTGATTTG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
377 s fr1.chrUn 86333387 120 + 349519338 TTCTCGTAGTGCTCCCGCAGACGTCTCAGCAGCGTGAAGGTCTTGTCGCACATGGTGCACTGCA--TGGGCCGGTG-----CATGAGCTTGTGCCGCTCGAACGCCGGCTCGTTGGCGAGGATCTTC-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
378 s danRer1.chrUn 103630787 106 + 367113659 TTCCGATTGTCAACTATTA---------------------AGTTATTGTAC-TGCTGGATGGAGCTGAGCCCTACATTTTCCACCATCTTTCCTAACGAAAGGGTCTTCTCATCTGAAGGAGGCTTTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
379
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
380 a score=10567.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
381 s hg17.chr14 98711174 32 + 106368585 gccgcgccgccccccgcgcccgggaccccggg
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
382 s panTro1.chr15 99209040 32 + 106954593 gccgcgccgccccccgcgcccgggaccccggg
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
383 s mm5.chr12 102665151 29 + 115071072 GCTG---CAGCCCCTGCGCCCGCCACCCCCGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
384 s rn3.chr6 132300528 29 + 147642806 GCTG---CAGCCCCCGCGCCCGCCACCCCTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
385 s canFam1.chr10 63975684 26 + 72717409 GCCC--TCGTCGCCCACGCCCACCACCG----
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
386
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
387 a score=4398.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
388 s hg17.chr14 98711206 12 + 106368585 cACCCCAC---CACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
389 s panTro1.chr15 99209072 12 + 106954593 cACCCCAC---CACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
390 s mm5.chr12 102665180 12 + 115071072 TGGCACGC---CACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
391 s rn3.chr6 132300557 12 + 147642806 TGGCACAC---CACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
392 s canFam1.chr8 70560183 15 + 77374719 CACCCCGCCCACGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
393
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
394 a score=-114.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
395 s hg17.chr14 98711217 1 + 106368585 C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
396 s fr1.chrUn 275910877 1 + 349519338 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
397
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
398 a score=135397.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
399 s hg17.chr14 98711218 72 + 106368585 GCCGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGACTCGGGCCGGCTCTCGTTCTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
400 s panTro1.chr15 99209084 72 + 106954593 GCCGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGACTCGGGCCGGCTCTCGTTCTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
401 s mm5.chr12 102665192 72 + 115071072 TCCGTTCTCGCGGCCACGGCCCAGCTCCGAGTCCATGCTGAAGCTCGACTCAGGCCGGCTCTCGTTCTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
402 s rn3.chr6 132300569 72 + 147642806 CCCATTCTCGCGGCCACGGCCCAGCTCCGAGTCCATGCTGAAGCTCGACTCAGGTCGGCTTTCATTCTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
403 s canFam1.chr8 70560198 72 + 77374719 GCCGTTCTCGCGGTTGCGGCTCAGCTCCGAGTCCATGCTGAAGCTCGACTCGGGCCGGCTCTCGTTCTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
404 s galGal2.chr5 44594806 72 + 56310377 GCCGTTTTCTCGGTTACGACTCAGCTCTGAGTCCATACTAAAGCTTGACTCTGGCCTGCTCTCATTTTCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
405 s fr1.chrUn 275910878 72 + 349519338 GCCGTTCTCCCTGTTCCGGTATAATTCGGACTCCATGCTAAAGTTTGATTCTGGTCGACTCTCACTCTCTAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
406 s danRer1.chrUn 103630894 72 + 367113659 GCCATTTTCCCTATTCCGACAGAACTCAGAGTCCATGCTGAAGTTTGACTCAGGCCTGCTTTCATTTTCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
407
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
408 a score=501.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
409 s hg17.chr14 98711290 1 + 106368585 T
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
410 s panTro1.chr15 99209156 1 + 106954593 T
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
411 s mm5.chr12 102665264 1 + 115071072 C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
412 s rn3.chr6 132300641 1 + 147642806 C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
413 s canFam1.chr8 70560270 1 + 77374719 C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
414 s galGal2.chr5 44594878 1 + 56310377 C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
415 s fr1.chrUn 275910950 1 + 349519338 t
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
416
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
417 a score=295.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
418 s hg17.chr14 98711291 1 + 106368585 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
419 s panTro1.chr15 99209157 1 + 106954593 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
420 s mm5.chr12 102665265 1 + 115071072 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
421 s rn3.chr6 132300642 1 + 147642806 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
422 s canFam1.chr8 70560271 1 + 77374719 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
423 s galGal2.chr5 44594879 1 + 56310377 t
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
424
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
425 a score=33922.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
426 s hg17.chr14 98711292 47 + 106368585 GCAGctcctcctcctcctcctcctcctcctcgtcctcctcctccGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
427 s panTro1.chr15 99209158 47 + 106954593 GCAGctcctcctcctcctcctcctcctcctcgtcctcctcctccGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
428 s mm5.chr12 102665266 44 + 115071072 GCAGCTCCTCTTCTTCCTCCTCCTCGTCCTCG---TCGTCCTCAGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
429 s rn3.chr6 132300643 44 + 147642806 GCAGCTCTTCTTCTTCCTCCTCCTCGTCCTCG---TCGTCCTCAGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
430 s canFam1.chr8 70560272 47 + 77374719 GCAGctcctcctcctcctcctcctcctcctcgtcgtcctcctcGGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
431
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
432 a score=21186.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
433 s hg17.chr14 98711339 20 + 106368585 TCGTGGCCCAGCGACGGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
434 s panTro1.chr15 99209205 20 + 106954593 TCGTGGCCCAGCGACGGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
435 s mm5.chr12 102665310 20 + 115071072 TCGGGGCCCAGAGATGGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
436 s rn3.chr6 132300687 20 + 147642806 TCGGGTCCCAGAGATGGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
437 s canFam1.chr8 70560319 20 + 77374719 TCGTGGCCCAGCGACGGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
438 s galGal2.chr5 44594918 20 + 56310377 TCATGGCCCAGGGAGGGATC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
439
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
440 a score=13223.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
441 s hg17.chr14 98711359 13 + 106368585 GCTCTCGTGGTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
442 s panTro1.chr15 99209225 13 + 106954593 GCTCTCGTGGTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
443 s mm5.chr12 102665330 13 + 115071072 GCTCTCATGGTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
444 s rn3.chr6 132300707 13 + 147642806 GCTCTCATGGTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
445 s canFam1.chr8 70560339 13 + 77374719 GCTCTCGTGGTGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
446 s galGal2.chr5 44594938 10 + 56310377 GCTCTCA---TTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
447 s danRer1.chrUn 103631014 13 + 367113659 GCCCTCGCCTTTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
448
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
449 a score=0.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
450 s hg17.chr14 98711372 3 + 106368585 CGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
451
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
452 a score=4230.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
453 s hg17.chr14 98711372 3 + 106368585 CGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
454 s panTro1.chr15 99209238 3 + 106954593 CGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
455 s mm5.chr12 102665343 3 + 115071072 CGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
456 s rn3.chr6 132300720 3 + 147642806 CGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
457 s canFam1.chr8 70560352 3 + 77374719 CGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
458 s galGal2.chr5 44594948 3 + 56310377 CTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
459 s fr1.chrUn 275910990 3 + 349519338 TGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
460
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
461 a score=1089095.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
462 s hg17.chr14 98711375 631 + 106368585 AAGTCACCGTCGGCCGCCTTGAGGCCCTCGCCCGCCAGCTCGCTGGTGCCGGGCTCGGGGGAGCTGGCGGCCGAGAGCCCGTCGTCGGAGCGGCCGGCCAGCGAGCCGGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTGGCCTGCGAGCACGCGTGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGACTGCGCCGGTGCACGATGAGATTGCTCTGGAACTTGAAGGTCTTGCCGCAGAACTCGCACGACTTGCTCTTGGCTGGCGGCTGCGGGGGCGGCGTGCCGCCAGGGGGCATGGGCGGCAGCGGCGGCGTGCTCAGGAACGGGGACTTGGGGCTGGGCTGGAA------GGGGTTCAGGAGCCGGTGCATAGGGTTGCCGCGGCCCGGGGACACGGGCGGCGGCG---TGGAGCTGTTGCCCGCCAGCTCGCGGAGCCGCCGCGAGAAGTCCATGGCGGGCGAGTCGATGGCCATGGGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCGACGAGCCCCATCTCCTCGGCACTGAGGCG---------GTGCGGGTCCAGGTGGTGGCGCGGCGGGGGACTGAAGAGAGGCGGCGTGCCCGGCAGGCGGCCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
463 s panTro1.chr15 99209241 631 + 106954593 AAGTCGCCGTCGGCCGCCTTGAGGCCCTCGCCCGCCAGCTCGCTGGTGCCGGGCTCGGGGGAGCTGGCGGCCGAGAGCCCGTCGTCGGAGCGGCCGGCCAGCGAGCCGGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTGGCCTGCGAGCACGCGTGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGACTGCGCCGGTGCACGATGAGATTGCTCTGGAACTTGAAGGTCTTGCCGCAGAACTCGCACGACTTGCTCTTGGCCGGCGGCTGCGGGGGCGGCGTGCCGCCAGGGGGCATGGGCGGCAGCGGCGGCGTGCTCAGGAACGGGGACTTGGGGCTGGGCTGGAA------GGGGTTCAGGAGCCGGTGCATAGGGTTGCCGCGGCCCGGGGACACGGGCGGCGGCG---TGGAGCTGTTGCCCGCCAGCTCGCGGAGCCGCCGCGAGAAGTCCATGGCGGGCGAGTCGATGGCCATGGGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCGACGAGCCCCATCTCCTCGGCACTGAGGCG---------GTGCGGGTCCAGGTGGTGGCGCGGCGGGGGACTGAAGAGAGGCGGCGTGCCCGGCAGGCGGCCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
464 s mm5.chr12 102665346 625 + 115071072 AAGTCGCCATCGGCCGCTTTCAGG---TCACCTGGCAGCTCGCTGGTGCCCGGCTCAGGGGAGCTGGCAGCTGAGAGCCCGTCGTCTGAGCGGCCAGCCAGAGAGCCCGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTCGCCTGCGAGCACGCATGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGGCTGCGCCGGTGCACGATGAGATTGCTCTGGAACTTGAAGGTCTTGCCGCAGAACTCACAGGACTTGCTCTTGGCAGGCGGCTGCGGTGGCGGTGTGCCCGCA---GGCATGGGTGGCAGCGGTGGCGTGCTGAGGAACGGGGACTTGGGACTGGGCTGGAA------AGGGTTCAGCAGCCGGTGCATAGGGTTGCCACGGCCTGGGGACACGGGCGGCGGCG---TGGAGCTGTTGCCGGCCAGTTCTCGCAGCCGCCGGGAGAAGTCCATGGCAGGAGAGTCTATGGCCATGGGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCCACGAGCCCCATCTCCTCTGCACTGAGGCG---------GTGTGGGTCCAAGTGATGGCGTGGCGGTGGGCTGAAGAGCGGTGGCGTACCTGGCAAGCGGCCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
465 s rn3.chr6 132300723 625 + 147642806 AAGTCGCCATCGGCCGCTTTGAGG---TCACCTGGCAGCTCGCTGGTGCCGGGCTCTGGGGAGCTGGCGGCCGAGAGCCCATCGTCTGAGCGGCCAGCCAGCGAGCCCGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTCGCCTGCGAGCACGCGTGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGGCTGCGCCGGTGCACGATGAGATTGCTCTGGAATTTGAAGGTCTTGCCGCAGAACTCACAGGACTTGCTCTTGGCAGGCGGCTGCGGTGGCGGCGTGCCCGTG---GGCATGGGTGGCAGCGGTGGCGTGCTGAGGAACGGGGACTTGGGGCTGGGCTGAAA------AGGGTTCAGCAGCCGGTGCATAGGGTTGCCACGGCCTGGGGACACGGGCGGCGGTG---TGGAGCTGTTACCGGCCAGTTCTCGCAGCCGCCGAGAGAAGTCCATGGCGGGAGAGTCTATGGCCATGGGGTTCAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCCACGAGCCCCATCTCCTCTGCACTGAGGCG---------GTGTGGGTCCAAGTGATGGCGTGGCGGTGGGCTGAAGAGCGGTGGCGTACCGGGCAGGCGGCCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
466 s canFam1.chr8 70560355 631 + 77374719 AAGTCGCCGTCGGCCGCCTTGAGGCCCTCGCCGGCCAGCTCGCTGGTGCCGGGCTCGGGGGAGCTGGCGGCCGAGAGCCCGTCGTCGGAGCGGCCGGCCAGCGAGCCGGCCTTGTGCATGTGCGTCTTCATGTGGCGCTTGAGCTTGCTCGCCTGCGAGCACGCGTGGTCGCACAGCTGGCACTTGTAGGGCTTCTCGCCCGTGTGGCTGCGCCGGTGCACGATGAGATTGCTCTGGAACTTGAAGGTCTTGCCGCAGAACTCGCACGACTTGCTCTTggcgggcggctgcggcggcggcgtgcccccggggggcATGGGCGGCAGCGGCGGCGTGCTCAGGAACGGGGACTTGGGGCTGGGCTGGAA------GGGGTTCAGGAGCCGGTGCATAGGGTTGCCGCGGCCCGGAGACACGGGCGGCGGCG---TGGAGCTGTTGCCCGCCAGCTCGCGGAGCCGCCGCGAGAAGTCCATGGCGGGCGAGTCGATGGCCATGGGGTTGAGGCGCATGACTCGGTCGAAGGCACTGGGGTGCTGGGCGACGAGCCCCATCTCCTCGGCACTGAGGCG---------GTGCGGGTCCAGGTGGTGGCGCGGCGGCGGGCTGAAGAGCGGCGGCGTGCCGGGCAGGCGGCCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
467 s galGal2.chr5 44594951 631 + 56310377 AAGTCTGTCTCACTGGATTTCAGTCCCTCTCCAGTGAGCTCGCTCGTGCCTGGCTCAGGAGAACTCGTGGTGGACAGTCCATCGTCTGACCTGCCTGTCATGGAGCCAGCTTTATGCATATGCGTTTTCATGTGACGCTTTAGCTTGCTGGCCTGGGAGCAAGCATGGTCACATAGCTGACATTTGTAGGGCTTTTCTCCTGTGTGACTACGCCGGTGGACGATAAGGTTGCTCTGGAACTTGAAGGTTTTCCCACAGAATTCGCAGGACTTACTCTTGGCCTGAGGCTGGGGAGGCGTAGTGCTGCTTGGGGGCATGGGGGGCAGTGGTGGGGTGCTCAAAAAAGGTGATTTAGGACTCGGCTGGAA------AGGATTCAACAGGCGATGCATAGGGTTGGTGCGACTGGGCGAGACTGGCGGAGGGG---TGGAACTGTTTCCTGCCAGCTCTCGAAGCCTTCTGGAGAAATCCATCGCTGGGGACTCAATTGCCATGGGGTTTAAACGCATAACTCTGTCAAAGGCACTGGGATGCTGGGCAACTAACCCCATTTCTTCGGCACTAAGGCG---------ATGTGGATCCAGATGATGACGAGGTGGTGGGCTGAATAGTGGAGGCGTGTTTGGGAGCCGACCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
468 s fr1.chrUn 275910993 637 + 349519338 AAGTCACCACCGTGGTTCTTCATGC------------GCTCACTTGTGCCTGGCTCCGGGGAACTTGTAGTTGATAGTCCATCATCCGAACGCCCAGTCAGTGAACCAGGCTTGTGCATGTGGGTCTTCATGTGGCGTTTCAGCTTACTCGCCTGAGAACATGCATGGTCACACAGCTGGCACTTGTAGGGTTTCTCTCCGGTGTGGCTTCGGCGATGCACAACCAAGTTGCTTTGGAACTTAAATGTCTTACCACAGAACTCACAGGATTTGACTTTGTTCTGCATCTGTGGAGGGCTAGTGCTGTTTGCGGGAGCCGGTGGTAAGGGAGGAGTGCACACAAAGGGTGACTTTGGCCCAATTTGAAAGGTGTTGGGGTTGAGTAATCGGTGAATATGGTTGGCCCTGCCTGGCGACAGCGGCGGTGTTGTACTGTTGCTATTACCCGCCAATTCACGTAACCTCCTGGAGAAGTCCATGGAGTGGGACTCCATGGACACGGGCGCGAGACGCATCACCTTTTCAAAGGCACTTGGGTGCTGTGAGATGAGACCCATTTCTTCTGTGCTAAGGCATTCTAGCCTATGGGAGTCCAGGTGGTGGCGGGCAGGGGGGCTAACAAATGCAGGCATGTTGGGCAGTCGGTTCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
469 s danRer1.chrUn 103631027 646 + 367113659 AAATCACCATCCCGATTTTTTATACCCTCCCCAGTGACGTCACTAGTGCCTGGCTCAGGTGAGCTGGTGGTGGACAGGCCATCGTCAGAGCGCCCTGTCATGGAACCAGATTTGTGCATGTGGGTCTTCATGTGGCGTTTTAATTTGCTCGCTTGAGAACAAGCGTGGTCACACAATTGGCACTTGTAAGGTTTCTCGCCTGTGTGGCTTCGCCGATGAACAACCAGATTACTCTGAAACTTGAAGGTCTTGCCACAGAACTCGCAAGATTTCGACTTGCCCTGTGTCTGTGGCGGGGTGGTGCTGTTAGGGGGCATGGGAGGCAGTGGAGGGGTGCTCAGAAAGGGTGATTTCGGGCTGGGCTGAAAGGGGTTGGGATTGAGAAGGCGATGCATAGGGTTAGCACGGCTCGGTGACAATGGTGGAGTGG---AATTGTTGTTTCCAGCAAGCTCTCTCAATCGGCGGGAGAAATCCATGGACTGGGACTCCATGGCCATGGGTGTCATGCGCATCACTCTTTCGAAGGCACTGGGATGCTGGGAGATTAAACCCATTTCCTCTGCGCTAAGGCGTTCCAGGCGATGGGGATCTAAATGATGGCGTGGAGGGGGGCTGACAAAGGGAGGCGTATTGGGGATACGGTTTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
470
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
471 a score=309091.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
472 s hg17.chr14 98712006 203 + 106368585 CGCCGAAGCCC---G-GGTGGTCCCGCAGG--ATGGGGCCCGTCATGCGCAGCAGGTTGAAGGGGTTGCTG---TCGCCCAGGAAATTCATGAGCGGGGACTGCGCCACGGCCTCCGGCCCGAGCGGCGGCGGGATGGTGAGCCGCGGCGTGAGCGAGCTGCTGGCCGGCCCGGGCTCCAGGTAGATGCGGAAGCCGTGCGTGTTCTGCGCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
473 s panTro1.chr15 99209872 203 + 106954593 CGCCGAAGCCC---G-GGTGGTCCCGCAGG--ATGGGGCCCGTCATGCGCAGCAGGTTGAAGGGGTTGCTG---TCGCCCAGGAAATTCATGAGCGGGGACTGCGCCACGGCCTCCGGCCCGAGCGGCGGCGGGATGGTGAGCCGCGGCGTGAGCGAGCTGCTGGCCGGCCCGGGCTCCAGGTAGATGCGGAAGCCGTGCGTGTTCTGCGCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
474 s mm5.chr12 102665971 203 + 115071072 CACCGAAGCCA---G-GGTGGTCCCGCAGG--ATGGGGCCCGTCATGCGCAGCAGGTTGAAAGGATTGCTG---TCCCCCAGGAAATTCATGAGTGGGGACTGCGCCACGGTCTCCGGCCCGAGCGGTGGCGGGATGGTGAGCCTGGGCGTGAGCGAGGTGCTGGCCGGCCCAGGCTCCAGGTAGATTCGGAAGCCATGTGTGTTCTGTGCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
475 s rn3.chr6 132301348 203 + 147642806 CTCCGAAGCCG---G-GGTGGTCCCGCAGG--ATGGGGCCCGTCATGCGCAGCAGGTTGAAAGGATTGCTG---TCCCCGAGGAAATTCATGAGTGGGGACTGCGCCACGGCCTCCGGCCCGAGCGGCGGCGGGATGGTGAGCCTGGGCGTGAGCGAGGTGCTGGCGGGCCCGGGCTCCAGGTAGATGCGGAAGCCATGCGTGTTCTGCGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
476 s canFam1.chr8 70560986 203 + 77374719 CGCCGAAGCCC---G-GGTGGTCCCGCAGG--ATGGGGCCCGTCATGCGCAGCAGGTTGAAGGGGTTGCTG---TCGCCCAGGAAATTCATGAGCGGGGACTGGGCCACGGCCTCGGGTCCCAGCGGCGGCGGGATGGTGAGCCGCGGCGTGAGCGAGCTGCTGGCCGGCCCGGGCTCCAGGTAGATGCGGAAGCCGTGCGTGTTCTGCGCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
477 s galGal2.chr5 44595582 203 + 56310377 CACCAAAGCCA---G-GATGTTCACGCAAA--ATGGGTCCTGTCATCCGCAGAAGATTAAAAGGGTTGTTG---TCTCCAAGGAAATTCATCAGCGGGGACTGTGCAACAGTCTCTGGTCCCAGAGGAGGAGGGATGGTGATGCGTGGAGTAAGGGAACTGTTGGAAGGGCTTGTTTCCAGGTAGATGCGGAATCCATGTGTGTTCTGGGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
478 s fr1.chrUn 275911630 206 + 349519338 CGATAAAAGCA---GAGGCGGGCTCTCGAGTCACTGGGCCTGTCATTCTTAAGAGCTGGAAAGGGTTGTTT---TCCCCCAGAAAGTTGATGAGGGGGGGATGAGGGATGCAGTCATTGCCCATGGGTGGAGGCATGGTGATGCGTGGAGTTAGGGCTGCGCTCGAGGGATCTGACTCCAGGTATATGCGAATGCCATGCGTGTTTTGAGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
479 s danRer1.chr5 4283993 209 + 40038624 CGATGTAGCCATGCG-GCGGTTCTCGTAGC--AGTGGGGCACCCATACGCAACAGCTGGAAAGGGTTGCTGCCATCACCCAGAAAGCTGGCAAGTGGGGAACGAGGCAAGGCATCAGCCCCCAGTGGTGGAGGAAGAGCCATGCGAGGGGTAAGAGAGCAGCTAGTAGGGTGGGTGTCCAGGTAGATGCGTATCCCATGGGTGTTCTGTGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
480
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
481 a score=170742.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
482 s hg17.chr14 98712209 76 + 106368585 TGCTGCAGCAGGAACCACGCGCTGTTGAAGGGCTGCTTGCATGTTGTGCAAATGTAGCTGGAAGGCTCATCTTT---AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
483 s panTro1.chr15 99210075 76 + 106954593 TGCTGCAGCAGGAACCACGCGCTGTTGAAGGGCTGCTTGCATGTTGTGCAAATGTAGCTGGAAGGCTCATCTTT---AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
484 s mm5.chr12 102666174 76 + 115071072 TGCTGCAGCAGGAACCAGGCGCTGTTGAAGGGCTGCTTGCATGTTGTGCAAATGTAGCTGGAAGGCTCATCTTT---AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
485 s rn3.chr6 132301551 76 + 147642806 TGTTGCAGCAGGAACCAGGCGCTGTTGAAGGGCTGCTTACATGTTGTGCAAATGTAGCTGGAAGGCTCATCTTT---AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
486 s canFam1.chr8 70561189 76 + 77374719 TGCTGCAGCAGGAACCACGCGCTGTTGAAGGGCTGCTTGCATGTTGTGCAAATGTAGCTGGAAGGCTCATCTTT---AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
487 s galGal2.chr5 44595785 76 + 56310377 TGCTGAAGCAAGAACCAAGCGCTATTAAAAGGCTGCTTGCATGTTGTGCAAATATAGCTTGAAGGCTCATCTTT---AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
488 s fr1.chrUn 275911836 79 + 349519338 TGCTGTAGCAGGAACCAGGCATTGGAAAACATCTGCTTACACGTGGTGCAGATATAACTGGAGGGCTCATCCCTCTGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
489 s danRer1.chrUn 103631683 76 + 367113659 TGCTGCAGAAGGAACCAGGCGTTGTAAAAGGGTTGTTTGCACGTTGTGCATATGTAACTTGAGGGTTCATCTCT---AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
490
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
491 a score=412979.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
492 s hg17.chr15 41486872 188 + 100338915 TTAGTGAGAAACATAATCGTGTTTATATTTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAGCACACTTCAGCACCGAGGCTGGGCATGAGGGGTCCGTCACCACCACATCAAATACCCCTAAAGCAATAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
493 s panTro1.chr16 41478602 188 + 101535987 TTAGTGAGAAACATAATCGTGTTTATATTTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAGCACACTTCAGCACCGAGGCTGGGCATGAGGGGTCCGTCACCACCACATCAAATACCCCCAAAGCAATAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
494 s mm5.chr2 120979995 188 + 181686250 TTAGTGAGAAACATAATCATGTTTATATTTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGTTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
495 s rn3.chr3 107897216 188 + 170969371 TTAGTGAGAAACATAATCATGTTTGTATTTTGGATGCTGCTGGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCATTCTTGTGATACCACAGGCAGCTGCAAGGCTTCAGCACACTTGAGCACCGAGGCTGGGCATGAGGGGTCTGTCACCACCACATCAAATACCCCTAAAGCAATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
496 s canFam1.chr30 13173383 188 + 43165425 TTAGTGAGAAACATAATCATGTTTGTATTTTGGATGCTGCTTGAATCCAATTCTCTCCCCAACAATGAGGCACTGGATCACCCACTCTTGTGACACCACAGGCAGCTGCAATGCTTCAGCACACTTCAGCACCGAGGCTGGGCATGAGGGATCCGTCACCACCACGTCAAATACCCCTAAAGCAATAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
497 s galGal2.chr10 80159 188 - 20909726 TTAACGAGGGACATAGTCATGTTTGTATTTTGGATGCTTGTTGTAGCCTACTCTCTCTCCAGCAATAAGGCTCTGGATCACCCACTCTTGTGAGACAACAGGCAACCTTAATGCTTCTGCGCACTTCAAGACAACAGCTGGGCAGGAAAGATCAGTCACCACCACATCATAAACACCCAATGCAATAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
498 s fr1.chrUn 325491827 188 - 349519338 GGATTATGACGCGTAGTTGTGGCGATACCGAGGCAGGCTATGGAAACCCAGGCACTCCCCACAGATCACACTCTGGATGAGCCACTCGGGAGACACCAGCGGCACTTCCTGTGATGCCATGTTCTTCTCCACTAGTGGGGAGCAGGTGTGGTCCGTCACCACAACGTCAAACTTGCCGGCAGGAATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
499 s danRer1.chrUn 117181337 182 - 367113659 TTACGTAGATGT---GTTGTGGCAGAATTCAGAATTGCTGTCGAAGTTGAGGCACTTTCCACAGATCAAGCTCTGAATCAGCCACTCCAGAGAGACAACAGGCATGTTTGAGGCC---ACACGCTTCACTTCCTTTGATGTACATGCTGATGATGTCACTGCCACATCAAACTTCACATCTGGAATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
500
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
501 a score=145507.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
502 s hg17.chr15 41673708 149 + 100338915 ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCTCCTGGCTTTGGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCTGCC---AGTGAACGACGGAGGCTGTATCCCCCGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
503 s panTro1.chr16_random 12462177 149 + 32210112 ATGGGTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCATGCTCCTGGCTTTGGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGACCGGAACCTGTACGAGCGGCC---AGTGAACGACGGAGGCTGTATCCCCCGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
504 s mm5.chr2 121140425 152 + 181686250 ATGGCTGGTCCCTTCTCCCGTCTGCTGTCTGCCCGCCCTGGACTCAGGCTCCTGGCTTTGGCTGGAGCTGGGTCTCTCACCGCCGGGATTCTGCTCCGCCCGGAATCTGTAGGAGCTGCCGCTGCTGAACGGAGGAGACTGTATCCCCCGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
505 s rn3.chr3 108059196 152 + 170969371 ATGGCTGGTCCCTTCTCCCGTCTGCTGTCTGCCCGCCCCGGACTCAAGCTCCTGGCTTTGGCTGGAGCTGGGTCTCTCGCCGCCGGGATTCTGCTCCGTCCGGAATCTGTACGAGCGGCCACCGGTGAACGGAGGAGACTGTATCCCCCGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
506 s canFam1.chr30 13349240 149 + 43165425 ATGGCTGGTCCCTTCTCTCGTCTGCTGTCCGCGCGCCCGGGGCTCAGGCTCCTAGCTTTGGCTGGAGCTGGGTCTCTAGCCGCTGGGTTTCTGCTCCGCCCGGAACCTGTAAGAGCCGCC---AGTGAACGACGGAGGCTGTATCCCCCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
507 s galGal2.chrZ 28834466 152 + 33651169 ATGGCTGGCACCTTTGGTCGTCTCCTGGCTGGCCGTGTGACTGCTGCACTTTTTGCAGCAGCAGGCACAGGGGTACTCACCACTGGGTACCTCCTCAACCAGCAAAATGTGAAAGCTACTGTGCATGAGAAGCGGAAGCTCTTCCCTCCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
508 s fr1.chrUn 97204237 143 - 349519338 ATGGCGAGTAGCTTCTCCAGGGTTCTGATCTCCAG---AAACATCCGGATCCTGTCGCTGTTGGG---GGGTTCGGTCACAGCCGGGATCCTGCTGCAGCGGCACCATGTCGGCGCCGAC---GGCCCCACACGGAGGAGGTACCCCGCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
509 s danRer1.chr4 497203 149 - 30025136 ATGGCTGGTTCAATTGGCAAGATGATGTCGAGCCGCACCACTGGCCTGCTCATGGCAAGCCTCGGAGCTGGTGCTTTGGCGACCGGATATATGATGAGTGACAGTGCTGCAATCTCTGCG---GACGAGAAGAGGAAACTCTACCCTCCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
510
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
511 a score=250959.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
512 s hg17.chr15 41679161 89 + 100338915 TCATAGCAGGTGGCCAAGGAAGCTGATAGTCAATACCAGGGACCAGGAAGGTCGTGACCAGTCCTGGAGGCCCCAGGCTGTACTTCGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
513 s panTro1.chr16 41682794 89 + 101535987 TCATAGCAGGTGGCCAAGGAAGCTGATAGTCAATACCAGGGACCAGGAAGGTCGTGACCAGTCCTGGAGGCCCCAGGCTGTACTTCGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
514 s mm5.chr2 121145551 89 + 181686250 TCATAATAGGTGGCCAAAAATGCTGACGGGCAATGCCAGGGCCCAGGAGGCTTGGAACCAGTCGTAGAGACCCCAGGCTGAGTTTCGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
515 s rn3.chr3 108064239 89 + 170969371 TTATAATAGGTGGCCAAAAAAGCTGATGGTTAGTGTCAGAGCCCAGGAAGCATGGAACCAGTCACAGAGACCCCAGGCTGAGCTTCGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
516 s canFam1.chr30 13354361 89 + 43165425 TCATATCAGGTTGCCAAGGAAGCAGATGGTCAATGCCATGGCCCAGGAGGGTTGTGACCAGTCCTGAAGGCCCCAGGCTGTGCTTCGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
517
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
518 a score=50892.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
519 s hg17.chr15 41826029 40 + 100338915 ATGCGCCTCCGCCGCCTAGCGCTGTTCCCGGGTGTGGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
520 s panTro1.chr16 41735415 40 + 101535987 ATGCGCCTCCGCCGCCTAGCGCTGTTCCCGGGTGTGGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
521 s mm5.chr2 121195614 40 + 181686250 ATGCGCTTCAGCTGCCTAGCTCTGCTCCCGGGCGTGGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
522 s rn3.chr3 108117268 40 + 170969371 ATGCGCTTCAGCTGCCTTGCGCTGCTCCCGGGCGTGGCGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
523 s canFam1.chr30 13397631 40 + 43165425 ATGCGCCCCCGCTGCCGAGCGCTGCTCCCGGGCGTGGCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
524
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
525 a score=11434.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
526 s hg17.chr15 41826069 20 + 100338915 TGCTTCTTGCCGCG---------------GCCCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
527 s panTro1.chr16 41735455 20 + 101535987 TGCTTCTTGCCGCG---------------GCCCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
528 s mm5.chr2 121195654 20 + 181686250 TGCTGCTCGCCTCG---------------GCCCGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
529 s rn3.chr3 108117308 35 + 170969371 TGCTGCTCGCCTCGGCCCTCCTCGCCTCCGCCCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
530 s canFam1.chr30 13397671 20 + 43165425 TGCTTTTCGCCGCG---------------GCCGGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
531 s fr1.chrUn 97210657 23 - 349519338 TGCTTTTAGCAGCG------------CTCACCGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
532
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
533 a score=118454.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
534 s hg17.chr15 41826089 107 + 100338915 CTCGC---CGCTGCCTCCGACGTGCTAGAACTCACGGACGACAACTTCGAGAGTCGCATCTCCGACACGGGCTCTGCGGGCCTCATGCTCGTCGAGTTCTTCGCCCCCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
535 s panTro1.chr16 41735475 107 + 101535987 CTCGC---CGCTGCCTCCGACGTGCTAGAACTCACGGACGACAACTTCGAGAGTCGCATCTCCGACACGGGCTCTGCGGGCCTCATGCTCGTCGAGTTCTTCGCCCCCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
536 s mm5.chr2 121195674 107 + 181686250 CTCGC---CGCCGCCTCCGATGTGTTGGAACTGACGGACGAAAACTTCGAGAGTCGCGTCTCCGACACGGGCTCGGCGGGGCTCATGCTAGTCGAGTTCTTCGCCCCCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
537 s rn3.chr3 108117343 107 + 170969371 CTCGC---CTCCGCCTCAGACGTGTTGGAACTGACGGACGAAAACTTCGAGAGTCGCGTCTCCGACACGGGCTCAGCTGGGCTCATGCTAGTCGAGTTCTTCGCCCCATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
538 s canFam1.chr30 13397691 107 + 43165425 CTCGC---CTCTGCCTCCGACGTGCTGGAACTCACTGACGACAACTTCGAGAGTCGCATCTCCGACACGGGCTCTGCGGGCCTCATGCTCGTCGAGTTCTTCGCTCCCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
539 s fr1.chrUn 97210680 101 - 349519338 TTCACGCAGGCCGCCAGTGATGTGCTGGAGTTCACGGATAACGATTTCGAAAGTAAAATCGGAGACC---------ATGAAATTATTCTTGTGGAGTTTTTCGCACCCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
540 s danRer1.chr17 15314657 98 + 35757233 CTCGT---GGAGGGCAGCGATGTGCTGGAGCTCGGAGATTCTGACTTTGA---------CCGGAGCGCAGGCATGCATGACACTCTGCTAGTGGAGTTCTTCGCACCTTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
541
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
542 a score=88002.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
543 s hg17.chr16 142908 95 + 88827254 ATG----TCTCTGACCAAGACTGAGAGGACCATCATTGTGTCCATGTGGGCCAAGATCTCCACGCAGGCCGACACCATCGGCACCGAGACTCTGG-AGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
544 s panTro1.chr18 150233 95 + 83875239 ATG----TCTCTGACCAAGACTGAGGGGACCATCATTGTGTCCATGTGGGCCAAGATCTCCACGCAGGCCGACACCATCGGCACCGAGACTCTGG-AGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
545 s mm5.chr11 32172234 95 + 121648857 ATG----TCTCTGATGAAGAATGAGAGAGCTATCATCATGTCCATGTGGGAGAAGATGGCTGCTCAGGCCGAGCCCATTGGCACTGAGACTCTAG-AGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
546 s rn3.chr10 95139962 95 - 110733352 ATG----TCTCTGATGAAGAATGAGAGAGCTATCATCATGTCCATGTGGGACAAAATGGCGCCTCATGCAGAGCCCATTGGCACTGAGACTCTGG-AGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
547 s canFam1.chr6 37152261 96 - 79106041 ATG----TCTCTGACCAAGGCCGAGAGGACCATCATCCTGTCCATGTGGGGCAAGATCTCCACCCAGGCGGATGCTATTGGCACCGAGGCCCTGGAAGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
548 s galGal2.chr14 13958597 95 + 20603938 ATG----GCACTGACCCAAGCTGAGAAGGCTGCCGTGACCACCATCTGGGCAAAGGTGGCTACCCAGATTGAGTCCATTGGGCTGGAATCACTGG-AGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
549 s fr1.chrUn 269729641 95 + 349519338 ATG----AGTCTGAGCAGGACTGACAAGGAGGCCGTGAAGGCCATTTGGGCCAAAATGTCCAAGAGCATTGATGTCATCGGGGCCGAGGCGTTTG-GCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
550 s danRer1.chrFinished 33475840 95 - 40167097 ATGAGTCTCTCTGCCAAAGAC----AAAGCTGCCGTCAAAACCCTGTGGGCCAAGATCGCTGGAAAGGCTGACGACATCGGACACGATGCTCTCT-CCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
551
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
552 a score=39370.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
553 s hg17.chr16 179963 35 + 88827254 TTACTTGTATTTCGCACTTCGGTCCCGGGAAGCCC-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
554 s panTro1.chr18 195782 35 + 83875239 TTACTTGTATTTCGCACTCCGGTCCCGGGAAGCCC-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
555 s mm5.chr17 68693958 35 - 93559791 TTACTTGTATTTTGTACTCCGGTCCCTGGAAGCCC-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
556 s rn3.chr10 95183773 35 - 110733352 TTACTTGTATTTTGTACTCCGGTCCCTGGAAGCCC-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
557 s canFam1.chr6 37185997 35 - 79106041 TTACTTGTATTTCGCACTCCGGTCCCTGGAAGCCC-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
558 s fr1.chrUn 145482403 32 + 349519338 TTACTTGTGTCTGGAGCCGTGCTC----GTGGCTGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
559
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
560 a score=142911.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
561 s hg17.chr16 179998 137 + 88827254 GACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGGACAATTTCCGTCGC---TCTCGGGAGGTAGATCTTGACCGCCTCCGACGCCGATCCCGGGAGCGTGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
562 s panTro1.chr18 195817 137 + 83875239 GACGATGTCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGATGTCTATCTCGGGACCGGGACCGGGACAATTTCCGTCGC---TCTCGGGAGGTAGATCTTGACCGCCTCCGACGCCGATCCCGGGAGCGTGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
563 s mm5.chr17 68693993 137 - 93559791 GGCGGTGACCCCGGCTGTGGCTCCGGGAACGGCTGCGATGGCGCCTGTATCTATCTCGGGATCTGGAACGGGAAAACTTCCGCCGC---TCTCTGGAGGTAGACCTAGACCGCCTCCGTCGACGATCCCGGGAGCGTGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
564 s rn3.chr10 95183808 137 - 110733352 GTCGGTGACCCCGGCTGTGGCTCCGGGAACGGCTGCGATGTCGCCGGTATCTATCTCGGGACCTGGAACGGGAAAACTTCCGCCGC---TCTCGGGAGGTAGACCTAGACCGCCTCCTTCGACGATCCCGGGAACGTGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
565 s canFam1.chr6 37186032 137 - 79106041 GGCGGTGGCCCCGGCTGTGGCTCCGGGAACGGCTGCGGTGGCGCCGGTGTCTGTCTCGGGACCGGGACCGGGATGACTTTCGTCGC---TCCCTGGAGGTAGATCTGGACCTCCTCCGACGCCGGTCCCGGGAGCGTGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
566 s galGal2.chr1 142364883 137 - 188239860 GGCTGCGACTCCGGCTGCGGCTGTTGGAGCGAGACCTGTGGCGATGGCGTTTCTCACGGGATTTAGAGCGAGTTCTTCTTTTCCGT---TCCCTGGAGGCTGAGCGAGAGCGATGTCTGCGACGATCTCGGGACCTAGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
567 s fr1.chrUn 145482435 134 + 349519338 GACGGTGTCCTCGGTTGCGGGAGCCCGATCTGCTGCGATGCCTCCTCCTCCTGTCCCTGGAGCGCGAACGGGAA------CGGCGCTTGTCTCGAGACGTCGAACGCGAGCGTCTCCTCCTGCGGTCACGAGAGCGGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
568
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
569 a score=23245.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
570 s hg17.chr16 244413 4 + 88827254 ATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
571 s panTro1.chr18 262355 4 + 83875239 ATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
572 s mm5.chr17 68753542 4 - 93559791 ATGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
573 s rn3.chr10 95244723 4 - 110733352 ATGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
574 s canFam1.chr6 37249961 4 - 79106041 ACGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
575
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
576 a score=198450.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
577 s hg17.chr16 244417 264 + 88827254 TGGACCACAAGGACTTAGAGGCCGAAATCCACCCCTTGAAAAATGAAGAAAGAAAATCGCAGGAAAATC-TGGGAAATCCATCAAAAAATGAGGATAA----CGTGAAAAGCGCGCCTCCACAGTCCCGGCTCTCCCGGTGCCGAGCGGCGGCGTTTTTTCTTTCATTGTTTCTCTGCCTTTTTGTGGTGTTCGTCGTCTCATTCGTCATCCCGTGTCCAGACCGGCCGGCGTCACAGCGAATGTGGAGGATAGACTACAGTGCCGCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
578 s panTro1.chr18 262359 264 + 83875239 TGGACCACAAGGACTTAGAAGCCGAAATCCACCCCTTGAAAAATGAAGAAAGAAAATCGCAGGAAAATC-TGGGAAATCCATCAAAAAATGAGGATAA----CGTGAAAAGCGCGCCTCCACAGTCCCGGCTCTCCCGGTGCCGAGCGGCGGCGTTTTTTCTTTCATTGTTTCTCTGCCTTTTTGTGGTGTTCGTCGCCTCATTCGTCATCCCGTGTCCAGACCGGCCGGCGTCACAGCAAATGTGGAGGATAGACTACAGTGCCGCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
579 s mm5.chr17 68753546 264 - 93559791 TGGACAACAAGGACTTAGAAGCTGAAATACACCCCTTGAAGAATGAGGACAAGAAATCACAGGAAAACC-CAGGAAACCTACCAAGAAACGAAGATAA----CTTGAAGAGCAAGCCTGTGCCTTCCCGCTTGTCCCGGTGCCGCACAGTGGCATTTTTCCTTTCCCTGTTCACCTGCCTCTTCGTGGTGTTTGTCCTGTCTTTCATCATCCCATGTCCAGACCGTCCCTCCTCACAGGGCACGTGGAAGCTTGACTACAACAATGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
580 s rn3.chr10 95244727 264 - 110733352 TGGATGACAAGGATCTAGAAGCTGAAATACATCCCTTGAAGAATGAGGACAAAAAGTCACAGGAAAACC-TAGGAAACCTACCAAAGACCGAGGACAA----CTTGAAGAACAAGCCTGTGCCTTCTCGCTTGTCCCGGTGTCGCACGGTGGCATTTTTCCTTTCCCTGTTCATCTGTCTCTTTGTGGTGTTTGTCCTCTCTTTCATCATCCCATGCCCAGACCGACCGTCCTCTGAGGACAAGTGGAGGCTGGACTACGACTATGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
581 s canFam1.chr6 37249965 264 - 79106041 TGGACAGCAAGGACCTAGAAGCCGAAATCCACCCCCTGAGGAACGAAGACAAGAGGCTGCCCGAGACCC-CGGGAAACCCGGGCCACGCAGACGAGAA----GCTGAAAAGCTCGCCCCGGCAGCCCCGCCTCTCCCGGTGCCGCACCGTTGTGTTTTTTCTTTCACTGTTTGTCTGCCTGTTCGTAGTGTTCGTGGTTTCGTTCATCATCCCGTGCCCGGAACGGCCCGTGTCGCAGGGGATGTGGCGGATAGACTACAGCGCGGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
582 s galGal2.chr14 6505218 264 - 20603938 TGGATAACAAAGACTCAGAAGCTGAGATCCACCCCCTGAAGACAGAGGACGTGAAAGCTCAAGAGAACCATGAGAACTCTGTTGA-----GAGGAGAATCATCATCAAGCAGTCGTCGCAGCTGTCTCGGCTGTCCCGCTGGCGCACCGCCGCCTTCTTCATCTCATTATTTCTGTGTCTCATCATCGTGTTTGCCTTCTCCTTTATCATTCCTTGCCCTGAGAGGCCTGTCTCAGAGAGAACGTGGCTCCGAAACTATGACAATGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
583
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
584 a score=3883.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
585 s hg17.chr16 259268 28 + 88827254 C-TAGGCCACCCCAT----CTCCACCCCCAGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
586 s mm5.chr17 68763356 29 - 93559791 CCTACTACTCCCCAT----CGGCACCTTCAGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
587 s rn3.chr10 95254895 29 - 110733352 CTTAGTCCTCCTCAT----TGCCACCTGCAGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
588 s canFam1.chr6 37261496 28 - 79106041 -CTAGGTGCCCCTGT----CCCCGCACGCAGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
589 s fr1.chrUn 32270640 32 + 349519338 -CTTGGCCTGTCCGTCCTGCTCCGCCATCCGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
590 s danRer1.chrNA 221970878 28 + 390413307 CCCTGGGGCCTCTAT-----TGCAAGTCCAGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
591
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
592 a score=-1898.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
593 s hg17.chr16 259296 9 + 88827254 CCACAAGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
594 s mm5.chr17 68763385 9 - 93559791 GAACTGGTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
595 s rn3.chr10 95254924 9 - 110733352 GAGCTGGTA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
596 s canFam1.chr6 37261524 9 - 79106041 TCACTTGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
597 s fr1.chrUn 32270672 9 + 349519338 CCGATGCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
598 s danRer1.chr1 5581271 9 + 40858791 CCATCATCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
599
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
600 a score=2916.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
601 s hg17.chr16 259305 2 + 88827254 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
602 s mm5.chr17 68763394 2 - 93559791 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
603 s rn3.chr10 95254933 2 - 110733352 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
604 s canFam1.chr6 37261533 2 - 79106041 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
605 s galGal2.chr14 6519763 2 - 20603938 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
606 s fr1.chrUn 32270681 2 + 349519338 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
607 s danRer1.chr1 5581280 2 + 40858791 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
608
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
609 a score=1053.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
610 s hg17.chr16 259307 19 + 88827254 TG---TGGGCTCCACAGGGGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
611 s mm5.chr17 68763396 19 - 93559791 TG---CAGGCTCCCTGGGGGTA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
612 s rn3.chr10 95254935 19 - 110733352 TG---CAGGCTCCCCAGAGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
613 s canFam1.chr6 37261535 22 - 79106041 AGTCACAGGCTCTGCAGATGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
614 s galGal2.chr14 6519765 19 - 20603938 CT---CGGTGTCACCGGCGGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
615 s danRer1.chr1 5581282 13 + 40858791 TG---TGG------TATGGGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
616
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
617 a score=-178.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
618 s hg17.chr16 259307 28 + 88827254 TGTGGGCTCCACAGGGGTGGGAAGGAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
619 s danRer1.chr1 5581282 19 + 40858791 TGTGG------TATGGGTGACGAGA---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
620
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
621 a score=499.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
622 s hg17.chr16 259326 3 + 88827254 GGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
623 s panTro1.chr18 279072 3 + 83875239 GGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
624 s mm5.chr17 68763415 3 - 93559791 GAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
625 s rn3.chr10 95254954 3 - 110733352 GAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
626 s canFam1.chr6 37261563 3 - 79106041 GGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
627 s galGal2.chr14 6519784 3 - 20603938 AGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
628
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
629 a score=4058.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
630 s hg17.chr16 259329 6 + 88827254 AGGAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
631 s panTro1.chr18 279075 6 + 83875239 AGGAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
632 s mm5.chr17 68763418 6 - 93559791 TGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
633 s rn3.chr10 95254957 6 - 110733352 TGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
634 s canFam1.chr6 37261566 6 - 79106041 AGGAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
635 s galGal2.chr14 6519787 6 - 20603938 AGCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
636 s danRer1.chr1 5581295 6 + 40858791 ACGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
637
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
638 a score=70372.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
639 s hg17.chr16 259335 48 + 88827254 GCAGGGCTGGGGCTCGAGTGCCGTGGCCTCCACGTAAACGGGAACACG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
640 s panTro1.chr18 279081 48 + 83875239 GCAGGGCTGGGGCTCGAGTGCCGTGGCCTCCACGTAATTGGGAACACG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
641 s mm5.chr17 68763424 48 - 93559791 GCAGGGCTGGGGCTTGAGTGCAGAGGCTTCCGCAAGAATGGAAATGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
642 s rn3.chr10 95254963 48 - 110733352 GCAGGGCTGGGACTTGAGTGCAGAGGCTTCCGCAAGAATGGGAATGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
643 s canFam1.chr6 37261572 48 - 79106041 GTGGGGCTGGGGCTCGGGTGTGGCGGCTTCCGCAGGAACGGAAAGGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
644 s galGal2.chr14 6519793 48 - 20603938 GCCGGGCTGGGGCTGGAGTGTCGCTGCTTGCGCATGAAGGGGAACACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
645 s fr1.chrUn 32270683 48 + 349519338 GCGGGGGAGGGGCTGGCGTGCCGCTGGCGTCTCATGAAGGGGAAGACG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
646 s danRer1.chr1 5581301 48 + 40858791 GCAGGCGAGGGGCTGGAGTGGCGCTGCCGACGCATGAACGGGAACACA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
647
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
648 a score=5348.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
649 s hg17.chr18 23786114 2 + 76117153 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
650 s panTro1.chr17 19719396 2 + 73346066 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
651 s mm5.chr18 16960413 2 + 91083707 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
652 s rn3.chr18 8050213 2 + 87338544 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
653 s canFam1.chr7 19431300 2 - 83037113 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
654 s galGal2.chr2 103976638 2 + 147590765 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
655 s fr1.chrUn 291830820 2 - 349519338 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
656 s danRer1.chrNA 203940100 2 - 390413307 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
657
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
658 a score=389078.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
659 s hg17.chr18 23786116 205 + 76117153 AGTCATCA---CCTCCACCATACATGTCAGCAAGTTTCTTGAACCGTGGCCCCCAGTCGTTCAGGTAATCATAGTCCTGCTCACCACCACTACTTGAGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGAGCCACTGCCTTCATAGTCAAACACTAACAGGGAGTCATATGGTGGAGCTGTGGGGTCATTGTCAGCCGCTTTAAGGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
660 s panTro1.chr17 19719398 205 + 73346066 AGTCATCA---CCTCCACCATACATGTCAGCAAGTTTCTTGAACCGTGGCCCCCAGTCGTTCAGGTAATCATAGTCCTGCTCACCACCACTACTTGAGGAATTAAGGGAGCTCAAGGACCCAGCAGTGGAGCCACTGCCTTCATAGTCAAACACTAACAGGGAGTCATATGGTGGAGCTGTCGGGTCATTGTCAGCCGCTTTAAGGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
661 s mm5.chr18 16960415 205 + 91083707 AGTCGTCA---CCACCGCCGTACATGTCCGCCAGTTTCTTGAAGCGGGGTCCCCAGTCATTCAGGTAGTCATAGTCCTGGTCCCCACCGCTACTGGAGGAGTTGAGGGAGCTCAAGGAGCCAGCCGTGGAGCCGCTGCCCTCGTAGTCAAAGACTAAGAGGGAGTCATACGGTGGCGCCGTGGGGTCGTTGTCAGCAGCTTTAAGGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
662 s rn3.chr18 8050215 205 + 87338544 AGTCATCA---CCACCACCATACATGTCGGCCAGCTTCTTGAAGCGGGGTCCCCAGTCATTCAGGTAGTCATAGTCCTGGTCCCCGCCGCTGCTGGAGGAGTTGAGAGAGCTCAAGGAGCCAGCCGTGGAGCCGCTGCCCTCATAGTCGAAGACTAAAAGGGAGTCATATGGTGGCGCCGTGGGGTCATTGTCAGCAGCTTTAAGGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
663 s canFam1.chr7 19431302 205 - 83037113 AGTCATCA---CCTCCACCATACATGTCAGCAAGTTTCTTGAACCGTGGCCCCCAGTCGTTCAGGTAGTCATAGTCCTGCTCGCCACCACTACTTGAAGAATTAAGGGAGCTCAAAGACCCAGCGGTAGAGCCACTGCCTTCGTAGTCAAAGACTAAGAGGGAGTCATATGGTGGAGCTGTGGGATCATTGTCAGCAGCTTTAAGGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
664 s galGal2.chr2 103976640 205 + 147590765 AGTCATCA---CCTCCACCGTACATGTCAGCAAGTTTCTTGAAACGTGGGCCCCAGTCATTTAGGTAGTCATAGTCTTGCTCACCACCGCTACTTGAGGAATTAAGAGAGCTCAAGGATCCAGCAGTGGAGCCGCTTCCTTCATAGTCAAAGACTAAGAGGGAATCGTATGGCGGGGCTGTAGGGTCGTTGTCGGCTGCTTTAAGTCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
665 s fr1.chrUn 291830822 205 - 349519338 AGTCATCGTCCCCTCCACCGTACAGGTCGGCCAGCTTCTTGAAGCGGGGGCCCCAGTCGTTGAGGTAGTCGTAGTCCTGGTCGCCCGAGCTGAT---GGAGTTGAGCGAGCTGACGGAGCCGGCTGTCGAGCCGGTGCCCTCGTAGTCGAACACCAGCAGGGAGTCGTAGGGAGGGGCCGTGGGGTCGTTATCCGCTGCTCTCAGACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
666 s danRer1.chrUn 257546281 205 - 367113659 AGTCGTCG---TTACCTCCGTACATGTCGGCGAGTTTGCGGAAGCGAGGGCCCCAATCGTTGAGGTAGTCATAGTCCTGGTCTCCTCCGCTGCTGGACGAGTGAAGGGAGCTTAGTGAGCCGGCCGTGGAGCCGCTGCCCTCGTAGTCAAACACCAGCAGGGAGTCATACGGAGGGGCCGTGGGATCGGTGTCGGCTGCCTTGAGGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
667
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
668 a score=581809.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
669 s hg17.chr18 59406881 165 + 76117153 ATGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGTTTGATCTTTTCAAAGAGCTGAAGAAAACAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCATCTTGACTGCAATTGGCATGGTCCTCCTGGGGACCCGAGGAGCCACCGCTTCCCAGTTGGAGGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
670 s panTro1.chr17 56243482 165 + 73346066 ATGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGTTTGATCTTTTCAAAGAGCTGAAGAAAACAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCATCTTGACTGCAATTGGCATGCTCCTCCTGGGGACCCGAGGAGCCACCGCTTCCCAGTTGGAGGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
671 s mm5.chr1 106957557 165 + 195203927 ATGGACTCACTAGGCACAGCAGCCACACAGTTCCTGTTTGATCTTTTCAAAGAACTGAATAAAACAAATGATGGCAACGTCTTCTTTTCCCCTGTGGGCATCTCAACAGCCATTGGCATGATCATCCTGGGGACCCGAGGAGCCACTGCTTCTGAGTTACAGAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
672 s rn3.chr13 13176896 165 + 111348958 ATGGACTCACTAAGCACAGCAACCACACATTTCCTGTTTGATCTTTTCAAAGAACTGAATAAAACAAGTGACGGCAATGTCTTCTTTTCTCCTTTGGGCATCTCAACAGCCATTGGCATGATCCTCTTGGGGACCCAAGGAGCCACTGCCTCTGAGTTACAGAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
673 s canFam1.chr1 108508362 165 - 124897793 ATGGATTCACTTGGTGCAGCATACACTCACTTTGGGTTTAATCTCTTCCAAAAGCTGAATAAAATAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCATTTCTGCTGCCATTGGCATGCTCATCCCAGGGGCCCGAGAAGCTACCGCCATGCAGTTGCAGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
674
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
675 a score=1700.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
676 s hg17.chr18 59455932 2 + 76117153 CT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
677 s panTro1.chr17 56296086 2 + 73346066 CT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
678 s mm5.chr1 106995539 2 + 195203927 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
679 s rn3.chr13 13306377 2 + 111348958 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
680 s canFam1.chr1 108539809 2 - 124897793 CT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
681 s galGal2.chr2 67392007 2 + 147590765 TA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
682 s fr1.chrUn 39424675 2 - 349519338 CT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
683 s danRer1.chr20 11152772 2 + 31913010 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
684
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
685 a score=2707.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
686 s hg17.chr18 59455934 3 + 76117153 ATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
687 s panTro1.chr17 56296088 3 + 73346066 ACG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
688 s mm5.chr1 106995541 3 + 195203927 AAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
689 s rn3.chr13 13306379 3 + 111348958 AAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
690 s canFam1.chr1 108539811 3 - 124897793 AAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
691 s galGal2.chr2 67392009 3 + 147590765 ATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
692 s fr1.chrUn 39424677 3 - 349519338 CAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
693 s danRer1.chr20 11135889 3 + 31913010 ATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
694
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
695 a score=316154.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
696 s hg17.chr18 59455937 400 + 76117153 GGGATGAGAATCTGCCATAGAAGAGGATGCT-GTTGGTCTTATTTTGCCTTATGAAGAATAGGAAAGGGTGATTACAACAGAACTCTT--CATTAGTTGAAGGAGAT-GAT---------AATTCGACT-------ACTACTACAGCGGTGGCAGCTGCAGCTTCCACTCCCTCCTCAGTGACCTCCACAAAGGCCTTGTGTAGGACTTTAGATACTGAGAGACCGTGGCTCCAGGTCATGCCT-------------------------------------------------------------------------------------GAGAGGTCTGCATCCC---CATTGAAGATATTCACCATTCCCATGGTTCTCAACGTGTCCTTGAGGTCATAGCTCTC---TTCCATTTTGAACCGAGGTAAGTGTAAATCGACACATGTCT---CTCTCATATTCTGCAAACTTGTCCATTCCATCAATTTCTCAGCAGTGAGTTTCTCTTCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
697 s panTro1.chr17 56298740 400 + 73346066 GGGATGAGAATCTGCCATAGAAGAGGATGCT-GTTGGTCTTATTTTGCCTTATGAAGAATAGGAAAGGGTGATTACAATGGAACTCTT--CATTAGTTGAAGGAGAT-GAT---------AATTCGACT-------ACTACTACAGCGGTGGCAGCTGCAGCTTCCGCTCCCTCCTCAGTGACCTCCACAAAGGCCTTGTGTAGGACTTTAGATACCGAGAGACCGCGGCTCCCAGTCATGCCT-------------------------------------------------------------------------------------GAGAGGTCTGCATCCC---CATTGAAGATATTCACCATTCCCATGGTTCTCAACGTGTCCTTGAGGTCATAGCTCTC---TTCCATTTTGAACCGAGGTAAGTGTAAATCGACATGTGTCT---GTCTCATATTCTGCAAACTTGTCCATTCCATCAATTTCTCAGCAGTGAGTTTCTCTTCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
698 s mm5.chr1 106995544 391 + 195203927 GGGAAGAGATTGTGCCAAAGAAGAGGATGCT-GTTGGTCTTACTGTGCTTGACCAAT---------GGATGATCACAATAGAAATCTT--CTGTAATCTGTAAAGATAAAT---------TATGGGATT-----------TTATCCCCGTGGTAGCAGCAGCTTCTGTTCCCTCTTCATTTACCTCCACAAAGGACTTGTGTAAAACTTTAGACACCACAAGACCTTGAGTGCTGTTCATGCCA-------------------------------------------------------------------------------------GAGAAGTCAGCCTTCTGTGGATCAAAGGCGCCAACCATCCCCATGTGTTTCAATGGAACTGAGAGGTCATACTTCTC---TTCCACTTTGAACCGAGGCAAAGATAAATACAACTCGGTCA---TATGCATATTTTCTGCTCTTGTCCATTCTAGTAACTTTTCAGTAGAGAGTTGTTCTTCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
699 s rn3.chr13 13306382 400 + 111348958 GAGAAGACATTCTGCCAAAGAAGAGGATGCT-GTTGGTAGCATTGTGCTTGATGAGGAATAAGAAAGGGTGATCACAATTGAAGTCTT--CGGTTATCTGTGCTGAT-GTT---------AAACTGACT----------TCTACCCCCGTGGCAGCAGCAGCTTCTGTCCCCTCTTCATTTACCTCCACAAAGGACTTGTGTAAAACTTTAGACACCATTAGACCTTGAGTGCTGCTCATGCCT-------------------------------------------------------------------------------------GAGAAGTCAGCCTTCTTTGAGTCAAAGGCGTCCACCATCCCCATGTGCTGCAACGGACCTGGGAGGTCATACTTCTC---TTCCACTTTGAACCGTGGCAAAGACAAATACAAGTCGATCA---TGTTCATGTTCTCTGCTCTTGTCCACTCTAGTAACTTGTCAGCAGTGAGCTGTTCTTCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
700 s canFam1.chr1 108539814 397 - 124897793 GGGAAGAGACTCTGCCCAAGAAGAGGATGCT-GTTGGTCTTATTGTGCTTGATGAAGAACAGGAAAGGGTGATCGCAATGAAA-----------AGGATAGATTGGT-GCT---------GATTTGGCA----ATAACTTCTACGTCTGTGGAGGCTGCAGCCTCCGTGCCCTCTTCGGTGACCTCCACAAAGGACTTGTGCCTGACTTTAGACACCACAAGATCCTGCCTCCCTGTCATGCCT-------------------------------------------------------------------------------------GAGAAGTTGGCCCTCTTTGTGTTGAAGGCATCCACCATTCCCAGGGCTTTCAGCGTGGCCTTGAGCTCATAACTCTC---TTCTACTTTGAACCGGGGTAAGTATAAATCCACCTGCCCAT---TGCTCATATTCTGTGAGCTCGTCCACTCTATTAGGTTCTCAGCAGTGAGTTGATCTTCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
701 s galGal2.chr2 67392038 400 + 147590765 GAGAGCAATATCTGCCACAGAACAAAATACT-GGAAGTTTTGTTGTGCCGGATGAAGAAGAGGAAGGGATGATCGGCAGTGAA------------GTCGGGAACGAT-CAT---------AGCACAACGGAGCACCATCACTCCTGCTGTGGCAGCTGCTGCTTCAGTGCCTTCTTCGTTGACCTCCACGAAGGACTTGTGAACCACTTCAGAGAGCACAAGCTCGTTACCAGAGGAGATTCCT-------------------------------------------------------------------------------------GAGAAGTTCGCCATCCGTAAGTCAAACGCATCACGCATTCCCATGTTGCTCAGGATGGGTTTCAGATCATAATTTTC---TTCCAGTTTAAATCTGGGTAAAGACAGCCTCACTTCTGTAC---TGTCCATCATTTCAGGATTGATCCAATCCATCAGCTTCTCGTATGTAAGTTCTCTTTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
702 s fr1.chrUn 39424680 486 - 349519338 GAGAGCAATATCTACCAGCAAACAGAATGTTCCTTGGAGGGGTTGTGTCTGATGAAGAAGAGGAAAGGATGGTCTGCATAGAA-----------ATTCTGAGGGAAT-ACTGCACAGTGCAAAGTGAAG----------ACAACACCAGTGGCAGCAGCAGCCTCAGTTCCCTCCTCATTGACTTCCACAAAAGCTTTGTGAATCACTTCTGACAGGACCAGGTCATTGGCTGGAGACATGCCTGTCAGTCAGAGGGAAAGAGAATATTTCCCATTAATATGATGGCTTGTCTCTTCTGAAAAGGCTCTTTGGAGAAAGTCTCCTACCAGAGAAGTCGCTCGCGGCTACATCAAAGGCATCCACCATGCCCATGCTGACCAGGATGTTCTTCATGTTACATTTCTC---CTCCATCTTGAACCGTGGCAGACCCACCTGGACTTCGACTA---CATTCATCATGTCTGGACGAGTCCACTCCATGAAGTTGTCATAGGTCAGCAGCTTCTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
703 s danRer1.chr20 11135892 406 + 31913010 GGGCTCTGAATCTGCCCAGAAAAAGGATGCT-GTTAGTGGGGTTGTGTCTGATGAAGAACATGAAGGGATGATCGGCTATGAAATCATGAAATGCACCTTGACAAGC-ACT---------GATTGGTAA---------TAACAATGCAGTTGCTGCTGCTGCTTCAGTTCCTTCCTCATTGACCTCAACAAAAGCCTTGTGAATCACTGCTGAAAGAAAGAGACCACCATTACTGCTCATGCCT-------------------------------------------------------------------------------------GTCAGATCAGCCTTGGTTTCCTGGAACACAGAGCTCATGCCCATCTTTTCCAGTGTTTCTGATAG---ACAGCTCTCAATCTCCAACTTGAACTTTGGCAGACGGACAATGATCTTTCTCCATGTGTCCATTTTGCCTCTACTGGTCCAGTCAAGCAGCTTTTGGAGGTTCAACTCGCTCTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
704
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
705 a score=170132.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
706 s hg17.chr18 59600586 168 + 76117153 ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAACCTGTTCAGAGAGATGGATGACAATCAAGGAAAT------GGAAATGTGTTCTTTTCCTCTCTGAGCCTCTTCGCTGCCCTGGCCCTGGTCCGCTTGGGCGCTCAAGATGACTCCCTCTCTCAGATTGATAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
707 s panTro1.chr17 56457248 168 + 73346066 ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAACCTGTTCAGAGAGATGGATGACAATCAAGGAAAT------GGAAATGTGTTCTTTTCCTCTCTGAGCCTCTTCGCTGCCCTGGCCCTGGTCCGCTTGGGCGCTCAAGATGACTCTCTCTCTCAGATTGATAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
708 s mm5.chr1 107433492 168 + 195203927 ATGGCCTCCCTTGCTGCAGCAAATGCAGAATTTGGCTTCGACTTATTCAGAGAGATGGATAGTAGCCAAGGAAAT------GGAAATGTATTCTTCTCTTCCCTGAGCATCTTCACTGCCCTGACCCTAATCCGTCTGGGTGCTCGAGGTGACTGTGCACGTCAGATTGACAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
709 s rn3.chr13 13464817 168 + 111348958 ATGGCCTCCCTTGCTGCAGCAAATGCAGAATTTGGCTTCGACTTATTCAGAGAGATGGATAGTAGTCAAGGAAAC------GGAAATGTATTCTTCTCTTCCCTGAGCATCTTCACTGCCCTGAGCCTAATCCGTTTGGGTGCTCGAGGTGACTGTGCACGTCAGATTGACAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
710 s canFam1.chr1 108653495 168 - 124897793 ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAATCTGTTCAGAGAGATGGATAACAATCAAGGAAGT------GAAAATGTGTTCTTTTCTTCCCTGAGCATCTTCACTGCCTTGGCCCTGGTCCGTTTGGGCGCACGGGGTGATTGTGTTTCCCAGATTGATAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
711 s danRer1.chrNA 84211897 168 + 390413307 ATGGAGTCTCTGTCTGCAGCAAACACACAGTTTTCCCTCAACCTGTTCAAGAAGAT------CAGCGGAGGAAACGCATCAGGAAATGTGTTTTATTCTCCTGTCAGCATCTCCTCGGCTCTGGCCATGGTGTCGCTCGGTGCCAAAGGAAACACCGCAGATCAGATGTTTAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
712
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
713 a score=40916.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
714 s hg17.chr19 59068595 56 + 63811651 ATGCCAGTGACGGTAACCCGCACCAC----------CATCACAACCACCACGACGTCATCTTCGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
715 s panTro1.chr20 56482145 56 + 61571712 ATGCCAGTGACGGTAACCCGCACCAC----------CATCACAACCACCACGACGTCATCTTCGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
716 s mm5.chrUn_random 23451477 45 - 102265694 ATGCCGGTAACAGTAACTCGTACAAC----------CATCACG---ACTACAACGTCA--------
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
717 s rn3.chr1 203863650 45 - 268121971 ATGCCGGTCACAGTCACCCGTACAAC----------CATCACA---ACTACATCATCA--------
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
718 s canFam1.chr1 18886888 56 - 124897793 ATGCCTGTGACGGTGACCCGCACGAC----------CATCACAACCACCACGTCGTCATCCTCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
719 s danRer1.chr2 9429255 61 - 32943701 ACGTCAAACCAAAGTACTCCCATTACTCCTGTCTGACATCACAGTCCCTGTAAC-TCTCCTC----
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
720
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
721 a score=19097.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
722 s hg17.chr19 59068651 29 + 63811651 CCTGGGGTCCC-CCATGATCGTGGGGTCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
723 s panTro1.chr20 56482201 29 + 61571712 CCTGGGGTCCC-CCACGATCGTGGGGTCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
724 s mm5.chrUn_random 23451522 22 - 102265694 -------TCCT-CCACCACTGTGGGGTCCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
725 s rn3.chr1 203863695 22 - 268121971 -------TCCT-CCACCACTGTGGGGTCCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
726 s canFam1.chr1 18886944 29 - 124897793 CCTGGGCTCCC-CAACCATCGTGGGGTCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
727 s fr1.chrUn 129654883 29 + 349519338 CCTGCGATTTC-CCGCCATGCCGGTGTTCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
728 s danRer1.chr2 9429316 30 - 32943701 TCTGTGATCCCATCATGGCAGTGGTGTTGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
729
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
730 a score=0.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
731 s hg17.chr19 59068680 4 + 63811651 CTCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
732
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
733 a score=2300.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
734 s hg17.chr19 59068680 4 + 63811651 C--TCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
735 s panTro1.chr20 56482230 4 + 61571712 C--TCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
736 s mm5.chrUn_random 23451544 4 - 102265694 C--TCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
737 s rn3.chr1 203863717 4 - 268121971 C--CCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
738 s canFam1.chr1 18886973 4 - 124897793 C--TCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
739 s fr1.chrUn 129654912 6 + 349519338 CGGTCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
740
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
741 a score=66381.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
742 s hg17.chr19 59068684 64 + 63811651 GGCCCTGACACAGCCCCTGGGTCTCCTTCGCCTGCTGCAGC--TGGTGTCTACCTGCGTGGCCTTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
743 s panTro1.chr20 56482234 64 + 61571712 GGCCCTGACACAGCCCCTGGGTCTCCTTCGCCTGCTGCAGC--TGGTGTCTACCTGCGTGGCCTTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
744 s mm5.chrUn_random 23451548 64 - 102265694 GGCGCTGACCCAGCCGCTGGGCCTCCTCCGCCTCCTGCAGC--TAATATCCACCTGTGTGGCTTTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
745 s rn3.chr1 203863721 64 - 268121971 GGCGCTGACCCAGCCCCTGGGCCTCCTCCGCCTCCTGCAGC--TAGTATCCACCTGTGTGGCTTTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
746 s canFam1.chr1 18886977 64 - 124897793 GGCGCTGACCCAGCCCCTGGGCCTCCTCCGTCTGCTGCAGC--TGCTGTCCACCTGTGTGGCCTTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
747 s galGal2.chr18 4859021 64 + 8919268 GGCTGTGACATCTCCAGTGGGAATAGTTCGTTTGCTGCAGA--TGATGTTTGGATGCACCACGTTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
748 s fr1.chrUn 129654918 59 + 349519338 TGCTCTCCCAGGTCTTCTGGGT-------GCGTTTAGCAGCTTTGTTGTTCACCTGTGTGGCCTTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
749 s danRer1.chr2 9429346 59 - 32943701 GTTCCTCACCTCTCCTGTGGACCCGAGTGGCTGCCA-------TGGTTTTCGCCTGCGTGGCCTTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
750
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
751 a score=20765.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
752 s hg17.chr19 59068748 35 + 63811651 TCGCTGGTGG-C---TAGCGTGGGCGCCTGGACGGGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
753 s panTro1.chr20 56482298 35 + 61571712 TCGCTGGTGG-C---TAGCGTGGACGCCTGGACGGGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
754 s mm5.chrUn_random 23451612 35 - 102265694 TCGCTGGTGG-C---CAGTGTGGGTGCCTGGACAGGGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
755 s rn3.chr1 203863785 35 - 268121971 TCACTGGTGG-C---CAGTGTGGGTGCTTGGACAGGGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
756 s canFam1.chr1 18887041 35 - 124897793 TCCCTGGTGG-C---CAGTGTGGGTGCTTGGACCGGGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
757 s galGal2.chr18 4859085 36 + 8919268 AGCCTGGTGGCC---CACCAGGGGGGATTCAGCGCAGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
758 s fr1.chrUn 129654977 35 + 349519338 AGCTTGGCAG-CGCACGGCGCCAACGTCC--ACGGGGG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
759
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
760 a score=827754.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
761 s hg17.chr19 59068783 773 + 63811651 CATGGGCAACTGGTCCATGTTCACCTGGTGCTTCTGCTTCTCCGTGACCCTGATCATCCTCATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTCTTGGCGCAACTTCCCCATCACCTTCGCC-TGCTATGCGGCCCTCTTCTGCCTCTCGGCCTCCATCATCTACCCCACCACCTATGTCCAGTTC-----C--------TGTCCCACGGCCGTTCGCGG------GACCACGCCATCGCCGCCACCTTCTTCTCCTGCATCGCGTGTGTGGCTTACGCCACCGAAGTGGCCTGGACCCGGGCCCGGCCCGGCGAGATCACTGGCTATATGGCCACCGTACCCGGGCTGCTGAAGGTGCTGGAGACCTTCGTTGCCTGCATCATCTTC---GCGTTCATCAGCGACCCCAACCTGTACCAGCACCAGCCGGCCCTGGAGTGGTGCGTGGCGGTGTACGCCATCTGCTTCATCCTAGCGGCCATCGCCATCCTGCTGAACCTGGGGGAGTGCACCAACGTGCTACCCATCCCCTTCCCCAGCTTCCTGTCGGGGCTGGCCTTGCTGTCTGTCCTCCTCTATGCCACCGCCCTTGTTCTCTGGCCCCTCTACCAGTTCGATGAGAAGTATGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGCTGCAGCCGCAGC------------CATGCCTACTACGTGTGTGCCTGGGACCGCCGACTGGCTGTGGCCATCCTGACGGCCATCAACCTACTGGCGTATGTGGCTGACCTGGTGCACTCT--GCCCACCTGGTTTTTGT-CA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
762 s panTro1.chr20 56482333 773 + 61571712 CATGGGCAACTGGTCCATGTTCACCTGGTGCTTCTGCTTCTCCGTGACCCTGATCATCCTCATCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTCTTGGCGCAACTTCCCCATCACCTTCGCC-TGCTACGCGGCCCTCTTCTGCCTCTCGGCCTCCATCATCTACCCCACCACCTATGTCCAGTTC-----C--------TGCCCCACGGTCGTTCGCGG------GACCACGCCATCGCCGCCACCTTCTTCTCCTGCATCGCGTGTGTGGCTTACGCCACCGAAGTGGCCTGGACCCGGGCCCGGCCCGGCGAGATCACTGGCTATATGGCCACCGTACCCGGGCTGCTGAAGGTGCTGGAGACCTTCGTGGCCTGCATCATCTTC---GCGTTCATCAGCGACCCCAACCTGTACCAGCACCAGCCGGCCCTGGAGTGGTGCGTGGCGGTGTACGCCATCTGCTTCATCCTAGCGGCCATCGCCATCCTGCTGAACCTGGGGGAGTGCACCAACGTGCTACCCATCCCCTTCCCCAGCTTCCTGTCGGGGCTGGCCTTGCTGTCTGTCCTCCTCTATGCCACTGCCCTTGTTCTCTGGCCCCTCTACCAGTTCGATGAGAAGTATGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGCTGCAGCCGCAGC------------CATGCCTACTACGTGTGTGCCTGGGACCGCCGACTGGCTGTGGCCATCCTGACGGCCATCAACCTACTGGCGTATGTGGCTGACCTGGTGCACTCT--GCCCACCTGGTTTTTGT-CA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
763 s mm5.chrUn_random 23451647 785 - 102265694 CATGGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCTTTGCTGTTACCCTCATCATCCTGATTGTGGAGTTAGGTGGACTCCAGGCCCACTTCCCCCTGTCATGGCGAAACTTCCCCATCACCTTTGCC-TGCTACGCGGCCCTCTTCTGCCTGTCGTCTTCCATCATCTATCCCACCACCTATGTGCAGTTC-----C--------TAGCTCATGGACGTACCCGG------GACCATGCCATCGCTGCCACCACTTTCTCCTGCGTTGCCTGTTTGGCGTATGCCACTGAAGTGGCCTGGACCCGTGCAAGGCCCGGTGAGATCACTGGCTATATGGCTACCGTGCCAGGGCTGCTCAAAGTTTTTGAGACCTTCGTAGCCTGTATCATCTTT---GCCTTCATCAGTGAGCCGCTCCTGTATAATCAGAAGCCAGCCCTGGAGTGGTGTGTGGCAGTCTATGCCATCTGCTTCATACTAGCAGGGGTGACCATCCTGCTCAACCTGGGGGATTGTACCAACGTGTTGCCCATCCCTTTCCCCACCTTCCTCTCAGGCTTGGCCTTACTCTCTGTTCTCTTTTACGCCACTGCCATCGTCCTCTGGCCCCTCTACCAATTTGATCAGAGATATCAGGGCCAACCCCGCCGTTCAATGGATCCAAGCTGCACTCGTAGTATTAGTTATATACAACCCAACACGGTGTGTTTCTGGGACCGACGACTGGCGGTGTCCATCCTGACAGGTATCAACCTGCTGGCATATGTGTCTGATCTGGTGTACTCC--ACTCGTCTGGTGTTCGT-CA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
764 s rn3.chr1 203863820 779 - 268121971 CATGGGTAACTGGGCCATGTTCACCTGGTGTTTCTGCTTTGCTGTTACCCTCATCATCCTGATTGTGGAGTTAGGTGGATTCCAGGCCCGCTTCCCCCTGTCATGGCGAAACTTCCCTATCACCTTCGCC-TGTTACGCGGCCCTCTTCTGCCTGTCGTCTTCCATCATCTATCCCACCACCTACGTGCAGTTC-----C--------TACCTCACGGACGTTCCCGG------GACCACGCCATCGCTGCCACCACCTTCTCCTGCGTTGCCTGTTTGGCGTATGCTACTGAAGTGGCCTGGACTCGTGCAAGGCCTGGTGAGATCACTGGCTACATGGCTACCGTGCCAGGGCTGCTCAAAGTGTTCGAGACCTTCGTAGCCTGCATCATCTTT---GCCTTCATCAGTGAGCCGAGCCTGTACCAGCAAAGGCCGGCCCTGGAATGGTGTGTGGCAGTCTATGCCATCTGCTTCATCCTAGCAGCAGTGACCGTCCTACTCAACCTGGGGGATTGTACCAACATGCTGCCCATCCCTTTCCCTACCTTCCTGTCAGGCCTGGCCTTACTGTCTGTGCTCCTTTACGCCACTGCCATCGTCCTCTGGCCCCTCTACCAATTTGATCAGAGGTATAACAGCCAACCCCGCCGTTCAATGGATCCAAGCTGCTCTCGTAGT------TATGTACAACCCAATGAAGTGTGTAACTGGGACCGACGGCTGGCGGTGTCCATCCTGACAGGTATCAACCTGCTGGCATATGTGTCTGATCTGGTGTATTCC--ACCCGTCTGGTGTTCGT-CA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
765 s canFam1.chr1 18887076 773 - 124897793 CATGGGCAACTGGTCCATGTTCACATGGTGCTTCTGCTTCGCTGTGACCCTCATCATCCTAATAGTCGAGTTAGGTGGCCTCCAGTCCCGCTTCCCCCTGTCCTGGAGAAACTTCCCCATCACCTACGCC-TGCTACGCTGCCCTCTTCTGCCTGTCGGCCTCCATCATCTACCCCACCACCTACGTTCAGTTC-----C--------TGTCTCATGGCCGCTCCCGG------GACCATGCCATCGCCGCCACTGCCTTCTCCTGCATCGCTTGTGTGGCTTATGCCACCGAAGTGGCCTGGACCCGGGCCCGTCCCGGAGAGATCACCGGCTACATGGCCACTGTGCCGGGCCTGCTCAAGGTGCTGGAGACCTTTGTGGCCTGCATCATCTTC---GCCTTCATCAGCAACCCCTCCCTGTACCAGCACCAGCCGGCCCTGGAGTGGTGTGTGGCCGTCTACTCCATCTGTTTCATCCTGGCGGCTGTGGCCATCCTACTGAACCTGGGGGACTGCACCAACATGCTGCCCATCTCCTTCCCCAGTTTCCTGTCGGGCCTGGCCCTGCTCTCCGTCCTGCTGTATGCCACGGCTCTGGTTCTCTGGCCGCTCTACCAGTTCAACGAGAAGTATGGTGGCCAGCCCCGTCGGTCGAGGGATGTTAGCTGCGCCGACAGG------------CACACCTACTACGTGTGTACCTGGGACCGCCGCCTGGCTGTGGCCATCCTGACAGCCATCAACCTGCTGGCTTACGTGGCTGACCTGGTGTACTCG--GCCCGCCTGGTTTTTGT-TA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
766 s galGal2.chr18 4859121 763 + 8919268 TAC-GGCACTTTCTGCATGTTCGTCTGGACCTTCTGCTTTGCTGTCACTGTCTTTATCATTACCTGCGAGTTCACGCACCTGCACAGCTGTCTGAGCATCTCCTGGGGAAACTTCACAGCTGCGTTCGCCATGCT-CGCCACGCTCATGTCGGTCACAGCGGCGGTGATCTACCCGCTCTACTTCGTGCAGCTCGGCTGC--------TACCCCATCACC-TGCGAGG-TGAGAGACTTCCGCATAGCGGCCAGCGTCTTTGCCGGCCTCGTGTTCGTTGTGTATGGCGCGGAGGTGTTCTTGACCAGAGCCAAACCAGGACAGGTCACCAGCTACATGGCCACTGTCTCTGGGCTCCTGAAGATCGTACAGGCCTTTGTGGCTTGCATCATCTTTGGGGCGCTGGTGAACGA---CAGCCAGTATAGCAAATACGTGGCCACACAGTGGTGCGTGGCCGTCTACAGCTTCTGCTTTATGGTCACGGTGGTGGTGGTCGCCTTCAGTGTCACTGGTAAGACCGCCCAGCTGTGCTTCCCCTTCGAGCGCTCTGTGGTCGTCTACACTTTCGGGGCCGTCCTGCTGTACGTGAGCGCGGCCGTCATCTGGCCGGTGTTCTGCTTTGACAGCAAGTACGGCTCCCCGCAGCGCC---------------------CCAGCGCC------------TGTGCCAAGGGCAGGTGCCCCTGGGACAGCCAGCTGGTGGTGGCCATCTTCACCTACGTCAACCTGCTGCTCTACGTGGTAGACCTGGCGTACTCCCAGCGCATCCGCTTCGTATCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
767 s fr1.chrUn 129655012 728 + 349519338 CATGGCTGACTGGTGCATCTTCTGCTGGGTGTTCAGCTTCACCTGCACTCTGCTGGTCCTGCTGGTGGAGCAGTTTGGCCTTCAGGCCCGCATCCCAGTCTCCTGGTCCAACTTCCCCATCACCGTGGCC-TGCTACGCCGCCCTCCTCTGCCTGTCTGCTTCCGTCATCTTTCCCCTGTTCTTCCTGAAGGAG-----CAGGGGTGGTGGTACGCCGACGAACGCAG--------CTTCCGCATCACCTCCACGATCTTCTCCTGCCTGGCGGCGGTGGCCTACATCTGCGAGGTGAGCCTGACCAAGGCGAAACCCGGACAGGTGGCGGGATACATGGCCACGGTCCCGGGCCTCCTGAAGGTGTGCCAGACCGTTGTGGCCTGCATCATCTTC---ATCCTGATCAGCAACCCCGTCTCCTACAGCCACCACGCGGCGCTGGAGTGGTGCATGGCCGTTTACTGCATCTGCTTCATCGTCTCCATGGTGGTGGTGATCCTGTGCGTGGGCGAATGCACCGGGTTTCTCCCGGTCCCCTTCTCCCAGTTCCTGTCAGCGTACGGCCTCCTGGCCTTCCTCATGTACTTGTCAGCTGTCATCGTCTGGCCCATTTTCACGTTTGACAAAAAGTA------------CCGGCGTGGAGGCGATAT--------GTCAAAGC-----------------------------------AGATCGGCG--TGGCAGTG------CTCACCGCCATCAACATGCTGCTGTACCTCGCTGACCTGGTCTACACC--GCTCACCTGGTGTTCAT-CA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
768 s danRer1.chr2 9429440 764 - 32943701 CACCGGCGACTGGTGCGTGTTCTGCTGGAGCTTCAGTTTCGTGGGAACTCTTCTAATCATCCTAGTGGAGATGTTTGGCCTGCAGACGCGTGCCCCAGTCTCGTGGAAGAACTTTCCCATCACGTTCGCC-TGCTACGCCTCTCTCCTCTGCCTCTCTGCGTCCATCATATTCCCCTTGTACTTCCTGAAGGGC-----T--------T---TGCTGGGCGCACTGAGATGATTAACTGCCGCATCGTGTCCACTGTATTTTCTTGCCTTGCTACTATCGCCTATTTAAGCGAGGTGAGTCTCAGTAAGGCCCGTCCAGGAGAAGTGTCCGGCTACATGGCTACCGCACCAGGGCTGCTAAAAGTGTGCGAAACCTTCATCGCCTGCATCATCTTC---GTCTTCATCAGCGAGCCCGAGTCGTACAAACAGAATGCGGCGACCCAGTGGTGTTTGGCTGTGTACTGCATCTGCTTCATTTTATCGGCAGGCATCATTGTGATGTGTGTTGGCGAATGCACAGGTTGCTTGCCTTTCTCCTTCGCCCGCTTCCTATCCACGTATGCCCTGCTGGCTGTGAGCATGTATCTGTCGGCCACCATCATCTGGCCCATTTATAAGTTCGACAATAAGCACGGAGGCCAGAGCCACCGACCAA------------ACATCTGCGGG------------TCCAGCATTGGACTTTGCCCGTGGGACAAACTGGTCGCCATTACTGTGCTCAGCTCGCTTAACTTCATTCTTTATCTGGCTGATCTCATTTACTCC--GCAAGGCTAGTGTTTGT-TA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
769
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
770 a score=10623.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
771 s hg17.chr19 59069556 8 + 63811651 AGGTCTAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
772 s panTro1.chr20 56483106 8 + 61571712 AGGTCTAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
773 s mm5.chrUn_random 23452432 8 - 102265694 AGGTCTGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
774 s rn3.chr1 203864599 8 - 268121971 AGGTCTAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
775 s canFam1.chr1 18887849 8 - 124897793 GGGTTTGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
776 s galGal2.chr18 4859884 8 + 8919268 ACATCTGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
777 s danRer1.chr2 9430204 8 - 32943701 ATGCTTAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
778
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
779 a score=64200.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
780 s hg17.chr19 59236026 120 + 63811651 CTACACTTTCAGTGCCGCATATTCATGAGATCCTGGGGGCTCCTGGGTGGTGT-CTGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCCTTGGGGG--TCTGCCGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
781 s panTro1.chr20 56680126 120 + 61571712 CTACACTTTCAGTGCCGCATATTCACGAGATCCTGGGGGCTCCTGGGTGGTGT-CTGAAGCTGCCTCAGACAGGGCGCTGGTGCTTAGCTCAGCATAGGTCACTCCTTGGGGG--TCTGCCGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
782 s canFam1.chr1 18994847 123 - 124897793 CTTCACCTGCCGCACTGCACATTCACAAGATCCTGGGGACTCCTCGGTGGGGCACAGAAGCTGCCTTAGGTGGTGCCTTGGGGTTTAGATCAGCATGGCTCACTCCCTGGGGGGTCTTTCAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
783
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
784 a score=41374.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
785 s hg17.chr19 59297998 10 + 63811651 ATGGCTGCGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
786 s mm5.chr7_random 31672903 10 + 46185828 ATGGCCGGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
787 s rn3.chr1 204132123 10 - 268121971 ATGGCTGCTA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
788 s canFam1.chr1 19108689 10 - 124897793 ATGGCCGGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
789
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
790 a score=139739.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
791 s hg17.chr19 59302168 120 + 63811651 TCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTGCTTCAAAGCCAAAGTCTTCCTCAACCTTAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
792 s panTro1.chr20 56743920 120 + 61571712 TCAGTCAGAGGCTGGGCTGGCCAGGGTCGGGTAGGGCAGCAGTTTGTCTGGACCCCGAGAAACCCAACTGGAATCCAGGGCCTCATCTGCTTCAAAGCCAAAGTCTTCCTCAACCTTAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
793 s mm5.chr7_random 31675860 120 + 46185828 TTAGTCAAAGGGTGGGCTGGCCAGGGTAGGGTAGGGTAGCAATTTGTCTGGCTCTCGGGAAACCCAACTTGAATCCAAGGCCTCATCTGCTTCAAAGCCAAAGTCTTCCTCAACCTTAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
794 s rn3.chr1 204134929 120 - 268121971 TTAGTCAAAGGGTGGGCTAGCTAGGGTAGGGTAGGGTAGCAATTTGTCTGGCCCTCGGGAAACCCAACTTGAATCCAAGGCCTCATCTGCTTCAAAGCCAAAGTCTTCCTCGACCTTAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
795 s canFam1.chr1 19111006 120 - 124897793 TCAGTCAAATGGGGGACTGGCTAGGGTGGGGTAGGGCAGCAGTTTGTCTGGCCCCCGAGAAACCCAACTGGAGTCCAGGGCCTCATCTGCTTCGAAGCCAAAGTCTTCCTCGACCTTAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
796
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
797 a score=46787.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
798 s hg17.chr2 118288583 7 + 243018229 ATGTCAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
799 s panTro1.chr13 4310009 7 + 134309081 ATGTCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
800 s mm5.chr1 73854532 7 - 195203927 ATGTCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
801 s rn3.chr13 77744300 7 - 111348958 ATGTCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
802 s canFam1.chr19 21837737 7 - 56914383 ATGTCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
803
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
804 a score=62416.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
805 s hg17.chr2 118288590 78 + 243018229 ACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGGAACCTCAAATTGCGGCAGCGGAACCTAAAGTTTCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
806 s panTro1.chr13 4310016 78 + 134309081 ACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGGAACCTCAAATTGCGGCAGCGGAACCTAAAGTTGCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
807 s mm5.chr1 73854539 78 - 195203927 AGTTACAGATGAAACTCCTGCGCAGGAAGATCGAGAAGCGGAATGCCAAGCTGCGGCAGCGAAACCTGAAGCTGCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
808 s rn3.chr13 77744307 78 - 111348958 AGTTACAGATGAAACTCCTGCGCAAGAAGATCGAAAAGCGGAACGCCAAGCTGCGGCAACGGAACCTGAAGCTGCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
809 s canFam1.chr19 21837744 78 - 56914383 ATCTACCCATGAAACTCCTGCGCAAGAAGATAGAGAAACGGAATCTCAAGTTGCGCCAGCGAAACCTGAAGCTCCGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
810 s galGal2.chr7 7730657 78 - 37338262 ACCTGCCCATGCGGCTGCTCCGCAAGAAGATCCACAAGAGGAACCTGAAGCTGCGGCAGCGCAACCTGAAGCTGCGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
811
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
812 a score=141298.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
813 s hg17.chr2 118394148 8 + 243018229 TCAGGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
814 s panTro1.chr13 4415862 8 + 134309081 TCAGGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
815 s mm5.chr1 73920237 8 - 195203927 TCAGGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
816 s rn3.chr13 77811845 8 - 111348958 TCAGGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
817 s canFam1.chr19 21899390 8 - 56914383 TCAGGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
818 s galGal2.chr7 7752959 8 - 37338262 TCAGGAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
819
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
820 a score=65234.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
821 s hg17.chr2 118394156 46 + 243018229 CCTTCGCTTTCACCTTGGACAGCAGCATCTCGTTCTTGCGGCCCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
822 s panTro1.chr13 4415870 46 + 134309081 CCTTCGCTTTCACCTTGGACAGCAGCATCTCATTCTTGCGGCCCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
823 s mm5.chr1 73920245 46 - 195203927 CCTTGGCTTTGATCTTAGATAGTAATAGCTCATTCTTTCGGCCCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
824 s rn3.chr13 77811853 46 - 111348958 CCTTGGCTTTGATCTTAGACAGTAATAGCTCATTCTTTCGGCCCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
825 s canFam1.chr19 21899398 46 - 56914383 CCTTGGCTTTCACCTTGGACAGCAGCACCTCATTCTTGCGGCCCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
826 s galGal2.chr7 7752967 46 - 37338262 AACTAGCTTTCAGCTTGGACAGCAGCATTTCGTTCTTACGACATTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
827 s danRer1.chr9 4164500 46 - 28422069 CTTTAGCCCTCAGTTTAGACAACAGCATCTCATTCTTACGGCACTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
828
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
829 a score=68843.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
830 s hg17.chr2 220190202 40 + 243018229 ATGCTCAAAGCGGTGATCCTGATTGGAGGCCCTCAAAAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
831 s panTro1.chr13 110354917 40 + 134309081 ATGCTCAAAGCGGTGATCCTGATTGGAGGCCCTCAAAAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
832 s mm5.chr1 75883503 40 + 195203927 ATGCTCAAAGCTGTGATTCTCATTGGAGGCCCCCAGAAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
833 s rn3.chr9 74861356 40 + 113649943 ATGCTCAAAGCTGTGATCCTCATTGGAGGACCCCAGAAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
834 s canFam1.chr37 28991402 40 + 33897405 ATGCTCAAAGCTGTGATCCTGATTGGAGGCCCTCAAAAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
835 s fr1.chrUn 298594715 40 - 349519338 ATGTTGAAGGCAGTTATTTTAATCGGAGGCCCACAGAAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
836 s danRer1.chrUn 200789632 40 + 367113659 ATGCTGAAGGCTGTCATTCTTATCGGAGGCCCCCAAAAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
837
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
838 a score=2052.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
839 s hg17.chr2 220229609 2 + 243018229 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
840 s panTro1.chr13 110394704 2 + 134309081 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
841 s mm5.chr1 75920524 2 + 195203927 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
842 s rn3.chr9 74897410 2 + 113649943 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
843 s canFam1.chr37 29028801 2 + 33897405 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
844 s galGal2.chr7 14430359 2 - 37338262 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
845 s fr1.chrUn 298724631 2 - 349519338 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
846 s danRer1.chrUn 144716830 2 + 367113659 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
847
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
848 a score=1675466.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
849 s hg17.chr2 220229611 1258 + 243018229 AGGTGCTGTTGCCCTGCTCCTGTTCAAAGAGTAGCATGGCCAGCTGGGTTCGGGAGCCGAGGCCCTCAAGCACGCTCTGGAGGCAGCGGTGGTACAGGTCCTCACTGAGCCTCGCGCTGCACGTCTGGGCCCGGTAGCGCTGCAGCAGCGCCGGCTCCACCGCCCGCAGCACATGCAGACTGGAGAAGTGGAGGAACAGCTCGTACACATCCAGGCTCTCCAGCAGCTCCTCTTCTTGTTCTGAGGCTGCCGCCAGGCGCCCACGGGCTGCCACATAGTCGGAGTTGTAGAAGCAGGCCTCGCTGGCTGCCTGGCGATCAAAGCGGCCAGTGTCACGGCCCAGCTCTGGGGGCCCAGG----CCCTTGTGGTGG----------------------GGCCACAGCTGGGTGGAAGGCTTGGAAATGCATGGGAAAGAAGGCCTGCCAGCCGGAGATGGCATGCATGCGGCAGCGGTTCAGGAAGTCAGGCGTGAGCACCGTGTCTGGCCCGGCCAGCAGGAACAGTGTGTCCAGCGGGTGCTTCTTGGAGAGTAGATCCATGAGGCGCAGTGGTGAGGGTGCGGCTGTCTGCACACTGAGCCATGGCACCCGGGCACCGGGGAAACGCCGCTCCAGCTCTGCCACGTGGGCCTTGACAGGTGCGAAGACATCTGCATGGGCCACGCGCTGGGCCTGGCGCGGCTCATACAGTAGCAGCAGGGTCAGGGCTGCCGCAGCATCACCAGGCTCCAGTGCTGCAGTGGCAAAGGCCTCCAAGAAGCCAGGGGCCAGGTCACGCTCAGCCGCAGCTAGAGGCAGCAGCACAGTGAGACGTGAGGCCTCAGTGACATAGGGCACAGGCAAGATCTCCACGCGGCTCAGCGGCCGGAGCAGCTGCACTCGGCGAGTGAGGGGCCGGCGGCCTCCCTGGGGGGTCAGTGCCTCCAGCTGCAAGTCCAGCGTGTATTCCATACCCCGGGCCGGATCAAAGCGTCGGTAGCCATTCACCAGCTGCTGCTTCTGGAGCCGCAAGGCCGGGTGGTAGCGGCGGTTCAGCTCCTCTAGAGCTGTCCCCAGAACATCGGCCACATCAGCCCGGTCAGCCCCACGCAGTGGGCAGCGGGGTGAGCCATCGGCGCAGGAGAAAGCGTGCTGCTCCGTGAAGTAGTCCCAGCGCAGCACCTCAAAGCGGGAGGCCGGGCGGGATGGTGCTGGAATACCCACGGGCCAAGCAGCTGCCTGGTCCCCATCAACGGCCAGATGGCTGGTATTCTGGATCTCCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
850 s panTro1.chr13 110394706 1258 + 134309081 AGGTGCTGTTGCCCTGCTCCTGTTCAAAGAGTAGCATGGCCAGCTGGGTTCGGGAGCCGAGGCCCTCAAGCACGCTCTGGCGGCAGCGGTGGTACAGGTCCTCACTGAGCCTCGCGCTGCACGTCTGGGCCCGGTAGCGCTGCAGCAGCGCCGGCTCCACCGCCCGCAGCACATGCAGACTGGAGAAGTGGAGGAACAGCTCGTACACATCCAGGCTCTCCAGCAGCTCCTCTTCTTGTTCTGAGGCTGCCGCCAGGCGCCCACGGGCTGCCACGTAGTCGGAGTTGTAGAAGCAGGCCTCGCTGGCTGCCTGGCGATCAAAGCGGCCAGTGTCACGGCCCAGCTCTGGGGGCCCAGG----CCCTTGTGGTGG----------------------GGCCACAGCTGGGTGGAAGGCTTGGAAATGCATGGGAAAGAAGGCCTGCCAGCCGGAGATGGCATGCATGCGGCAGCGGTTCAGGAAGTCAGGCGTGAGCACCGTGTCTGGCCCGGCCAGCAGGAACAGTGTGTCCAGCGGGTGCTTCTTGGAGAGTAGATCCATGAGGCGCAGTGGTGAGGGTGCGGCTGTCTGCACACTGAGCCATGGCACCCGGGCACCGGGGAAACGCCGCTCCAGCTCTGCCACGTGGGCCTTGACAGGTGCGAAGACATCTGCGTGGGCCGCGCGCTGGGCCTGGCGCGGCTCATACAGTAGCAGCAGGGTCAGGGCTGCCGCAGCATCACCAGGCTCCAGTGCTGCAGTGGCAAAGGCCTCCAAGAAGCCAGGGGCCAGGTCACGCTCAGCCGCAGCTAGAGGCAGCAGCACAGTGAGACGTGAGGCCTCAGTGACATAGGGCACAGGCAAGATCTCCACGCGGCTCAGTGGCCGGAGCAGCTGCACTCGGCGAGTGAGGGGCCGGCGGCCTCCCTGGGGGGTCAGTGCCTCCAGCTGCAAGTCTAGCATGTATTCCATACCCCGGGCCGGATCAAAGCGTCGGTAGCCATTCACCAGCTGCTGCTTCTGGAGCCGCAAGGCCGGGTGGTAGCGGCGGTTGAGCTCCTCTAGAGCTGTCCCCAGAACATCGGCCACATCAGCCCGGTCAGCCCCACGCAGTGGGCAGCGGGGTGAGCCATCGGCGCAAGAGAAAGCGTGCTGCTCCGTGAAGTAGTCCCAGCGCAGCACCTCAAAGCGGGAGGCCGGGCGGGATGGTGCTGGAATGCCCACGGGCCAAGCAGCTGCCCGGTCCCCATCAACGGCCAGACGGCTGGTATTCTGGATCTCCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
851 s mm5.chr1 75920526 1255 + 195203927 AGGTGCTGTTCCCCTGTTCCTGCTCAAAGAGCAGCATGGCAAGCTGGGTGCGGGAGCCAAGGCCCTCAAGTACGCTCTGGCGACAGCGGTGGTAAAGGTCTTCACTGAGCCGTGCACTGCACGGCTGGGCCCGGTAGCGCTGCAGCAAGGCTGGCTCTACTGCTCTCAGCACGTGCAAGTTGGAGAAGCGCAGAAACAACTCGTACACATCCAGGCTCTCCAGCAGCTCCTCCTCCTGCTCCGAGGCCGCCACCAGCCGGCCACGGGCCGCCACATAGTCGGAGTTGTAGAAGCATGCCTCACTGGCAGCCTGGCGATCAAAGTGACCGGTGTCACGGCCCAGCTCTGGTGGCCCAGG----GCCCTGAGGTGG----------------------AGCCACAGCAGGGTGGAAGGCCTGGAAGTGCATGGGGAAGAAGGCCTGCCAGCCAGAGATGGCATGCATGCGGCAGCGGTTCAGGAAATCAGGTGTGAGTACCGTGTCTGGCCCGGCCAGCAGGAACAGAGTGTCTAGTGGGTGCTTCTTGGACAGCAGATCCATGAGACGCAGTGGAGAGGGCGCTGCTGTCTGCACACTGAGCCAGGGCACCCGGGCACCAGGGAAACGCCGCTCTAGCTCTGCCACGTGGGCCTTGACAGGTGCGAAGACGTCTGAGTGGGCTGCCCGCTGGGCCTGGCGTGGCTCATACAGCAGCAGCAGGGTCAAGGCTGCT---GCATCACCAGGTTCCAGGGCTGCAGTGGCAAAGGCTTCTAAGAAGCCAGAAGCCAGGTCTCGTTCCGCTGCAGCCAGCGGCAGTAGCACAGTGAGCCGAGAAGCCTCGGTGACATAGGGTACAGGCAAGATCTCCACTCGGCTCAAGGGCCGAAGGAGCTGCACCCTGCGGGTGAGGGGCCAGCGGCCACCCTGGGGTGTCAGCGCTTCCAGCTGCAGGTCTAGTGTGTACTCCATGCCTCGGGCTGGATCAAAACGCCGGTAGCCGTTCACCAGCTGTTGCTTCTGGAGCTGCAGCGCTGGCTGGTAACGGCGGTTGAGCTCCTCTAAGGCTGTCCCCAGGACGTCAGCCACATCAGCCTGGTCGGCCCCACGCAACGGGCAGCGGGGAGAGCCATCGGCGCAGGAGAACGCGTATTGTTCTGTGAAGTAGTCCCAGCGCAGAACCTCAAAGCGTGAGGCAGGGCGAGACGGTGCTGGGATGCCCACTGGCCAGGCAGAGGCTCTCTCCCCATCAGCAGCCAGTCGGCTGGTATTCTGGATCTCCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
852 s rn3.chr9 74897412 1255 + 113649943 AGGTGCTGTTACCCTGTTCCTGTTCAAAGAGCAGCATGGCAAGCTGGGTGCGGGAGCCAAGGCCCTCAAGCACGCTCTGGCGACAGCGGTGATAAAGGTCCTCGCTGAGCCGAGCGCTGCATGGCTGGGCCCGGTAGCGCTGCAGCAAGGCTGGTTCCACTGCCCTCAGCACATGCAAGCTAGAGAAGCGTAGAAACAACTCATACACATCCAGGCTCTCCAGCAGCTCCTCCTCCTGCTCGGAGACTGCCACCAGCCGTCCACGGGCCGCCACATAGTCGGAGTTGTAGAAGCATGCCTCGCTGGCAGCCTGACGATCAAAGTGGCCGGTGTCACGGCCCAGTTCTGGTGGCCCAGG----GCCCTGAGGTGG----------------------AGCCACAGCAGGGTGGAAGGCCTGGAAGTGCATGGGAAAGAAGGCTTGCCAGCCCGAGATGGCGTGCATGCGGCAGCGGTTCAGGAAGTCGGGTGTGAGCACTGTGTCTGGCCCGGCCAGCAGGAACAGAGTGTCCAGCGGGTGCTTCTTGGAGAGTAGATCCATGAGGCGCAGCGGAGAGGGCGCGGATGTCTGTACACTGAGCCAGGGCACTCGGGCACCAGGGAAACGCCGCTCTAGCTCGGCCACGTGGGCTTTGACGGGTGCGAAGACATCTGCGTGGGCTGCCCGCTGGGCCTGGCGTGGCTCATACAGCAGCAGCAGGGTCAAGGCTGCG---GCATCGCCAGGTTCCAGTGCTGCAGTGGCAAAGGCTTCTAGGAAGCCAGATGCCAGGTCACACTCTGCTGCAGCCAGAGGCAGCAGCACAGTGACCCGAGAAGCCTCGGTGACATAGGGCACAGGCAAGATCTCCACTCGGCTCAAGGGCCGAAGGAGCTGTACCCTGTGGGTGAGGGGCCAGCGGCCACCCTGGGGCGTCAGCGCTTCCAGCTGCAAGTCTAGTGTGTACTCCATACCTCGGGCTGGATCAAAACGCCGGTAGCCATTCACCAGCTGTTGCTTCTGGAGCCGCAGTGCTGGCTGGTAACGGCGGTTGAGCTCCTCTAAGGCTGTTCCTAGGACATCAGCCACATCGGCCTGGTCGGCCCCACGCAGCAGGCAGCGGGGTGAGCCGTCAGCACAGGAGAAAGTGTGCTGTTCCGTGAAGTAGTCCCAGCGCAGAACCTCAAAGCGCGAGGCAGGGCGAGACGGCGCTGGAATGCCCACTGGCCAGGTAGAAGCCCTCTCCCCATCAGCAGCCAGTCTGCTGGTATTCTGGATCTCCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
853 s canFam1.chr37 29028803 1258 + 33897405 AGGTGCTGTTGCCCTGCTCCTGCTCAAAGAGCAGCATGGCCAGCTGGGTGCGGGAGCCCAGGCCCTCCAGCTCGCTCTGGCGGCAGCGGTGGTACAGGTCCTCGCTGAGCCGCGCGCTGCACGCCTGCGCCCGGTAGCGCTGCAGCAGCGCTGGTTCCACGGCGCGCAGCACGTGTAGGCCCGAGAAGCGCAGGAACAGCTCGTACACGTCCGTGCTCTCCAGCAGCTCCTCTTCCTGCTCCGAGGCCGCTGCCAGCCGTCCGCGGGCTGCCACGTAGTCGGAGTTGTAGAAGCAGGCCTCGCTGGCCGCCTGGCGGTCGAAGCGGCCCGTGTCTCGGCCCAGCTccgggggcccggg----gccctggggggg----------------------cgccacggccgggTGGAAGGCCTGGAAGTGCATGGGGAAGAAGGCCTGCCAGCCAGAGATGGCGTGCATGCGGCAGCGGTTCAGGAAGTCGGGCGTGAGCACCGTGTCGGGCCCGGCCAGCAGGAACAGCGTGTCCAGCGGGTGCTTCTTGGAGAGCAGGTCCATGAGGCGCAGCGGCGAGGGTGCAGCTGTCTGCACGCTGAGCCAGGGCACCCGGGCACCCGGGAAACGCCGCTCGAGTTCCGCCACGTGGGCCTTGACAGGCGCAAAGACATCTGCGTGGGCCGCCCGCTGGGCCTGTCGTGGCTCGTACAGGAGCAGCAGGGTCAGGGCTGCAGCCGCGTCACCCGGCTCCAGCGCCGCGGTGGCGAAGGCCTCCAGGAAGCCAGGGGCCAGGTCCCGCTCGGCCGCAGCCAGAGGCAGCAACACGGTGAGACGCGACGCCTCGGTGACGTAGGGCACAGGCAGGATCTCCACGCGGCTCAGGGGCCGCAGCAGCTGCACCCGGCGGGTGAGGGGCCGGCGGCCGCCCTGCGGGGTCAGCACCTCCAGCTGCAGGTCCAGCGTGTACTCCATGCCGCGGGCAGGATCGAAGCGCCGGTAGCCGTTGACCAGCTGCTGCTTCTCGAGCCGCAGGGCCGGGTGGTAGCGGCGGTTGAGCTCTTCCAGGGCGGCACCCAGCACGTCGGCCACGTCGGCCCGGTCGGCCCCTCGCAGCGGGCAGCGGGGCGAGCCGTCGGCGCAGGAGAAGGCGTGCTGCTCTGTGAAATAGTCCCAGCGCAGCACCTCGAAGCGAGAGGCCGGGCGGGATGGTGCGGGAATGCCCACGGGCCAGGCGGCCGCCCGCTCGCCGTCAGCTGCCAGGTGGCTGGTGTTCTGGATCTCCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
854 s galGal2.chr7 14430361 1258 - 37338262 AGGTGCTGTTCCCCTGCTCCTGCTCAAAGAGCACCATGGCCAACTGGGAGCGGGACCCAACGCCCTCCAGGCTGCTCTGCACGCAGCGGTGGTAGATCTCCTCACTGAGCCGCGGGTTGCAGGCCTGGTGCCGGTAGTGCTGCAGCAGGGCGGGCTCCACGGCCCGGAAGACGTGAAGGTTGGAGTACTTGATGAACATATCGTAGATGTCCAGGGTCTCCAGGATGTCCTCATTCTCCTGCACGTCACCCGCCATGCGGGTGCGTGCTGCCATGTAGTCAGCATTGTAGAAGCAGGCCTCATGGAAGACATCGCGGTCAAAGCGCCCTGCATCCCGCAGGAGGTCCAGTGTGGCAGGCGGTGCCTGGTTGTGG--------------------TAGGCGACGGCGGGGTTGTAGCCCTGGAAGTGGATGGGGAAGAAGACCTGCCAGTTGTTGATGGTGTTCATCCGGCAGCGGTTCAGGAAGTCGACGGTGACCTCTGTGCCCACACCGGCCACAAAGAACAGCGTGTCCACGGGATGCTTCTTGGAGATGATGTCCATGACCTTGATTTGGGAGGGGGCATCTGTCTTCACGCTGATCCACGGGATCTTCACCTCGGCATACTTGCGCTCATACTCTGTGATCTGGGCCTTCACAGGGGCAAAGATGTCGTTCTGGGTCACCTGCTGGGCCTCGAATGGATCGTAGATGAACAGGAAGGTGAGCACCGCG---TTCTCGCTGCTCTCAAAGGCAGCTGCCGCATAGGCCTCCAGGAAGCGTGCGGCATGGTCCCGTTCGTGGGCAGTGAGCGGCAAGATGACGTTGATGCGGCTGGCCTCCGTCACATAGGGCATAGGGATGATCTCCACCTCGCTGAGGGGCCGCACCAGGTGCACGCGCTTGGTGACAGAGCGGCTGTGACCCTTCTGCGTGACCACCTCCACCTGCAGGTCCAGCGTGTACTCCATGCCGCGCGTAGGGTCAAAGCGCCGGTAGCCATTCACCAGCTGCTGCTTGCGGACATGCAGCACCGGCTGGTACTTGCGGTTCAGCTCCTCCATGGCTGTGGCCACCACGTCAGCCACATCAGCTAGGTCTGCGCCCTGCAGCTCGCATTTGGGGGAGCCATCCACGCAGGCATAGACCTGATCCTCTGTGAAGTAGTCCCAGCGCAGCACCTCGAAGCGAGTTTTGGGCTGGAATGGAGGAGGGATGCCGACAGGCCACGCGGCACTGTGGTCCCCATCTGCAGACAGGCTGCTGGCATTCTGGATCTC---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
855 s fr1.chrUn 3409912 1273 + 349519338 AAGTGCTGTTGGCCTGCTCCTGCTCAAAGAGCGCCATGGCCAGGTGGGAGCGCGAGCCCAGCCCCTGTAGGTTACTGAGGACGCAGCGGTGGTAGACGTCCTCGCTGAAGCGGGGGTTGCAGGTCCGTCTCACGTACTTCTGGATCAGAGCCGGCTCCACGGCCCTGAAGACGTGCAGCCCCGAGTACCGCACAAATATGTCGTACACGTCCATGCTCTCCAGGAGCTCCTCGTTGTCCAAGAGGTCGGCCGCCATCTTGGTCCTCGCCGTCATGTAGTCGGCGTTGTAGAAGCAGGCCTCGTCAAACACGTGGCGGTCGAAGCGGCC---GTCCCGCAGCGACTC-GGAGGCGAAGG----CGGACGAGGCGGCCGAGGGCTGCTGGTCCCGGTACATGACGGCGGGGCTGAACTCCTGGAAGTGGATGGGGAAGAACACCTGCCAGTTGCTGATGGTGTTCATCCTGCAGCGGTTCAGGAAGTCGGCGTTGACCTCCGTCCACACGCTCGCCAGGAAGAAAAGCGTGTCCACCGGGTGCTTCTTGGAGATGATGTCCATCAGCTTGACCTGCGAGGGCACCTCCGTCTTCACGCTGATCCAGGGGATCTTCACGTCCCCGTAGCGCTTCTCCACCTCTCCGATCATGGCCTTGATGCCCGCGAACACGTCGGCCTGACTGACGCGCTGCGCGTCGAACGGGTCGTAGATGAACAGGAACGTGAGCAGGACG---TTGTCGCGGGCGTCCAAGGTGTTCATCACGTACATATCCAGGAAGTTGCCGACAAAGTCCTGGTCCTGGGCGGTGACGGGGAGGATGACCTGCACCCGGGTGGCCTCCGTCACGTACGGCATGGGGATGATCTCCACGGCGCTCAGAGGGCGCAGCAGGTTCACGCGCTTGGCGATGACTTGGCTGTGGTCCTTCTGGGTGTACGCCTCCAGCGCCAGGTCCAGCACGTACTCCATGCCGCGGGTGGGGTCGAAGCGCCTGTAACCGTTGAGCAGACGCCGCTTGGTGAAGCGGAGCTGCGGCTGGTAGCGCTCGTTCAGGCGCTCCACCGCGATCTCCAACACGGCGTCGACGTCCGCGCGGTCGGCGCCTCTCATCTCGCACTTGGGCGAGCCGTCGACGCAGGAGTAGATGTGCTCTTCCGTGAAGTATTCCCAGTTTATCACCTCGAAGCGAGTTCTCGGCTTAAACGGGGAGTTGATGCCGACGGGCCACGTGACTCCGGCTTTGCCCTCGGGCGTCAGCTCGCTCAGGTTGTTGATCTGCGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
856 s danRer1.chrUn 144716832 1261 + 367113659 AAGTACTGTTGCCCTGTTCCTGTTCAAACAGCAGCATGGCGAGCTGAGAGCGTGATCCAAGGCTATCCAGGGTGCTTTGTACACACCTCTGGTAGATTTCTTCACTAAGGCGAGGATTACACGTTTGGTAGCTGTATTTCTGATGCAGGGCCGGCTCCACTGCTCGGAAAACATGGAGGCCAGAGTATTTGACGAACATGTCATAGATATCAAGGTTCTCCAGGATCTCCTCATTCTCCAGCACATCCGATGACATCCGGGTACGGGTCGCCATGTAGTCCGAGTTGTAGAAGCAAGCTTCGGTGAAGGAGCTGCGATCGAAAAGACCAGCCTCTTTGACCAAATCCAACGCACTGGGAAGAGGCTGGTTGTGA--------------------TAAGCGATGTCAGGATTGTAGTACTGGAAGTGGATTGGAAAGAACACCTGCCAGTTGTTGATGGAGTTCATCCGACAGCGATTGAGGAACTCTGAACTGATGCTTGTTTTTACCGTCGCAATGAAGAACAACGTGTCAACCGGGTGCTTCTTGGAGATGATGTCCATGAATTTGATTTGAGACGGACTTTCGCTTTTAACACTAATCCAGGGGATTTTGACTGCAGGATATCGATGTTCGTACGTACTGATTTGTGCTTTGATGCTGGAGAAGATGTCATTCTGGTTGACTTGTTGGGCCTCTATTGGATCGTAGATGAAGAGGAACGTCAAGATCGCA---TTCTCGCTGGTTTCGAATGCATTTGTGGCATACACTTCTAAAAACTGATGAACGTAATCTCGATCTTGAAGAGTAACGGGTAAGATGATATGAACTCTAGTTGCTTCTGTAACGTAAGGCATAGGGATGATCTCGATGCGACTGAGAGGTCTTACTAAGTGGACCCTCTTGGTAATAGAGCGACTGTGTCCTTTTTGGTTAACTACCTCCAATTGTAGGTCCAGGGTGTACTCCATACCTCTGGTGGGGTCAAAACGTCTGTATCCATTGATTAGCTGTTGCTTCTTTAGGTACAACACAGGCTTGTACTTTTTATTCAGTTCACCCATTGCTGTCTCAATGACATCGGCTACGTCTAGCTTGTCAACTCCACGAAGCTCGCATTTCGGAGAGCCATCGATGCAAGAGTAAACCTGATCCTCAGTGAAGTAATCCCACCGCAGGACCTCGAATCGTGTTTTGGGCTCAAAGGGTGGATTGATTCCAACTGGCCACAAAGCACTGCGGTTGCCCTCAAAAGCCACTACACTGACATTTCTAATTTCCGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
857
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
858 a score=133281.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
859 s hg17.chr20 33330413 10 + 62435964 TCAGGTGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
860 s panTro1.chr21 35343723 10 + 65473740 TCAGGTGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
861 s mm5.chr2 155883450 10 + 181686250 TCATGTGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
862 s rn3.chr14 87484150 10 + 112220682 TCATGTGAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
863 s canFam1.chr24 27188710 10 + 50732077 TCAGGTGAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
864
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
865 a score=135043.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
866 s hg17.chr20 33513606 186 + 62435964 ATGGAGACAAGAAGCCCTG---GGTTGAACAACATGAAGCCCCAGTCACTGCAGCT---GGTACTGGAAGAGCAGGTGCTGGCACTACAGCAGCAGATGGCAGAGAATCAGGCAGCCTCCTGGCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCAGAGACAAGCAACCCTTGTGAGGAAGCTGCAGGCCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
867 s panTro1.chr21 35533536 186 + 65473740 ATGGAGACAAGAAGCCCTG---GGTTGAACAACATGAAGCCCCAGTCACTGCAGCT---GGTACTGGAAGAGCAGGTGCTGGCACTACAGCAGCAGATGGCAGAGAATCAGGCAGCCTCCTGGCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCAGAGACAAGCAACCCTTGTGAGGAAGCTGCAGGCCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
868 s mm5.chr2 156025320 183 + 181686250 ATGGAGACAGGGAGCCCCG---GGTTG---AACATGAAGCCCCAGTCCTTGCAGCT---GGTGCTGGAGGGGCAGGTGCTGGCGCTGCAGCAGCAGATGGCCGAGAATCAGGCTGCCTCCTGGCGGAAACTGAAGAACTCCCAAGAGGCCCAGAAGAGACAAGCAACCCTCGTGAGGAAGCTGCAGGCCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
869 s rn3.chr5 13191474 192 - 173106704 CTGCAGCTGGAGCAGGCTGTGCGGCTGGAGACTGGGGAGCTGGAGGCACAGGAGCCCCGGGGTCTGGTGCGGCAGAGCGTGGAGCTGAGGAGGCAGCTGCAGGAGGAGCAGGCCTCCTACCGGCGCAAGCTACAGGCCTACCAGGAGGGCCAGCAGCGGCAGGCCCAGCTAGTGCAGCGGCTGCAGGCCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
870 s canFam1.chr24 27350813 186 + 50732077 ATGGAGACGCGAGGCCCTG---GGTTGAACAATATGAAGCCCCAGTCACTGCAGTT---GGTGCTGGAGGAGCAAGTACTAGCACTACAGCAGCAGATGGCAGAGAACCAAGCAGCCTCCTGGCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCAGAGGCAAGCAACCCTCGTGAGGAAGCTGCAGGCCAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
871
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
872 a score=79158.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
873 s hg17.chr20 33579500 27 + 62435964 CTAGGGAACCAGACCATCTTCCAAAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
874 s panTro1.chr21 35599874 27 + 65473740 CTAGGGAACCAGACCATCTTCCAAAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
875 s mm5.chr2 156065808 27 + 181686250 CTAGGGAATCAGACCATCTTCCAAAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
876 s rn3.chr3 146317055 26 + 170969371 CTAGGGAATCAGA-CGTCTTCCAAAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
877 s canFam1.chr24 27411797 27 + 50732077 CGAGGGCACTGGACCACCCTCCAAAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
878
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
879 a score=183752.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
880 s hg17.chr20 33593260 88 + 62435964 ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCCAAGACTTTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
881 s panTro1.chr21 35611606 88 + 65473740 ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCCAAGACTTTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
882 s mm5.chr2 156071489 88 + 181686250 ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCTAAGACTCTGGAGGACTTCCGGGTCAAGACCTGCGGGGGTGCCACGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
883 s rn3.chr3 146322266 88 + 170969371 ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCTAAGACTCTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
884 s canFam1.chr24 27422888 88 + 50732077 ATGGAGGCGCTGGGGAAGCTCAAGCAGTTCGATGCCTACCCCAAGACTCTGGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
885 s fr1.chrUn 60145707 88 - 349519338 ATGGATACTTTTAGCAAACTGAAACAGTTTGACGCTTATCCCAAAACTCTGGAGGATTTTAGGGTGAAGACATGGGGCGGTGCGACCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
886 s danRer1.chr20 18851405 88 + 31913010 ATGGATGCGTTAAATAAACTCAAACAATTTGACGCGTATCCGAAAACTCTAGAGGACTTCAGGATCAAAACATGTGGAGGAGCCACGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
887
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
888 a score=802859.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
889 s hg17.chr21 32707032 160 + 46944323 ATGCTTCTGCCGGGACGCGCACGCCAACCGCCGACGCCCCAGCCCGTGCAGCATCCCGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCCTCTTCTACTGCACTGTCCTGGTCTGCTCCAAAGAGATCTCAGCGCTCACCGACTTCTCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
890 s panTro1.chr22 32678009 160 + 47338174 ATGCTTCTGCCGGGACCCGCACGCCAACCGCCGACGCCCCAGCCCGTGCAGCATCCCGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCCTCTTCTACTGCACTGTCCTGGTCTGCTCCAAAGAGATCTCAGCGCTCACCGACTTCTCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
891 s mm5.chr16 91265497 160 + 98801893 ATGCTCCTGCCAGGACACCCGCGTCCACCACCCGCGCCCCAATCGGCGCAGAATCAGGGCCTCCGCAGGCAGGTAGAGCCTCCGGGGCAGCTTCTGCGCCTGTTCTACTGCACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCTCACCGATTTCTCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
892 s rn3.chr11 30818860 160 + 87800381 ATGGTCTTGCCCGGACACCCGCGTCTGCCGCCCGGGCCACAGCCACCGCAGAATCCCGGCCTCCGCAGGCAGGTAGAGCCTCCAGGGCAGCTTCTGCGCCTCTTCTACTGCACGGTCCTAGTGTGCTCCAAAGAGACCTCCGCGCTCACCGATTTTTCCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
893 s canFam1.chr31 30192155 160 + 41215879 ATGCTTCTGCCTGGACAcgcgcgcccgccgcccgcgccgcagcccgcgcAGCATCCCGGACTCCGCCGGCAGGTAGAGCCTCCCGGGCAGCTCCTGCGCCTCTTCTACTGCACCGTCCTGGTCTGTTCCAAGGAGATCGCGGCGCTCACGGACTTCTCCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
894
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
895 a score=93692.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
896 s hg17.chr21 32869641 381 + 46944323 TCAGATTCGGCCCTGAAGGGCCACGCAGACCTCGGCCAAGGATGGGAAGGAGTCCAGGTGCCAGGCAGCCCAGGGCGAGTGGTGCCCACAGGCTTGGGCTGTGCTGTGCATAAGGGCCACACCTGAAGCTCGGCCACACCTGAGGCTCGGCCACCACATAGGCCCCGTTTCTTTACCAAGATAGGTTCCTGCAGAGGTCGTGAAGCTGCTGTGGTCATTTGCTGGCAGCGACGTGAAGATAGAATTCTTTCCTGACTCAACCAGGGGCACTCTCGTCTCCTCCCCGTGAGACCCGCAATGCAGGAAGCACCCACAGCTGCATGGACAGAACTGGGGCCTGGGAAAGAGGCCAGGAAGGTGCCAGATGAGAGGGCGCTCCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
897 s panTro1.chr22 32842524 381 + 47338174 TCAGATTCGGCCCTGAAGGGCTACGCAGACCTCGGCCAAGGATGGGAAGGAGTCCAGGTGCCAGGCAGCCCAGGGCGAGTGGTGCCCACAGGCTTGGGCTGTGCTGTGCATAAGGGCCACACCTGAAGCTCGGCCACACCTGAGGCTCAGCCACCAGATAGGCTCTGTTTCTTTACCGAGATAGGTTCCTGCAGAGGTCGTGAAGCTGCTGTGGTCATTTGCTGGCAGCGACGTGAAGATAGAATTCTTTCCTGACTCAACCAGGGGCACTCTTGGCTCCTCCCCGTGAGACCCGCAATGCAGGAAGCACCCACAGCTGCATGGACAGAACTGGGGCTTGGGAAAGAGGCCAGGCAGGTGCCAGATGAGAGGGCGCTCCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
898
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
899 a score=62310.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
900 s hg17.chr21 33321040 51 + 46944323 ATGGACTCGGACGCCAGCCTGGTGTCCAGCCGCCCGTCGTCGCCAGAGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
901 s panTro1.chr22 33286911 51 + 47338174 ATGGACTCGGACGCCAGCCTGGTGTCCAGCCGCCCGTCGTCGCCAGAGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
902 s mm5.chr16 91660624 51 + 98801893 ATGGACTCGGACGCCAGCCTGGTGTCTAGTCGCCCATCGTCCCCAGAACCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
903 s rn3.chr11 31244293 51 + 87800381 ATGGACTCGGACGCCAGCCTGGTGTCTAGTCGCCCGTCGTCGCCAGAACCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
904 s canFam1.chr31 30690225 51 + 41215879 ATGGACTCGGACGCCAGCCTGGTGTCCAGTCGCCCGTCGTCACCAGAGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
905 s galGal2.chr3 53622667 51 + 108638738 ATGAATTCTGACTCCAGCTCCGTCTCCAGCAGAGCCTCCTCGCCGGACATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
906 s fr1.chrUn 314816718 51 - 349519338 ATGGACTCAGATACGAGCCGCATGTCGAGCAGACCCTCCTCCCCCGAGGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
907
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
908 a score=19085.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
909 s hg17.chr21 33321091 26 + 46944323 GATGACCTTTTTCTGCCGG----------------------------CCCGGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
910 s panTro1.chr22 33286962 26 + 47338174 GATGACCTTTTTCTGCCGG----------------------------CCCGGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
911 s mm5.chr16 91660675 26 + 98801893 GATGATCTTTTTCTGCCCG----------------------------CCCGGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
912 s rn3.chr11 31244344 26 + 87800381 GATGATCTTTTTCTGCCGG----------------------------CCCGGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
913 s canFam1.chr31 30690276 26 + 41215879 GATGACCTGTTTCTGCCGG----------------------------CCCGGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
914 s galGal2.chr3 53622718 54 + 108638738 GACGAGATGTACCTGCGGGAGcaccgccaccaccaccaccaccaccaccCGGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
915 s fr1.chrUn 314816769 22 - 349519338 GACGACATCTTCATGTCCA----------------------------GCC----
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
916 s danRer1.chr24 18057443 31 + 23152154 CATCAGCTGTTTCGAGCAA-----------------------AACGACCCGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
917
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
918 a score=-194.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
919 s hg17.chr21 33321117 3 + 46944323 TAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
920 s panTro1.chr22 33286988 3 + 47338174 TAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
921 s mm5.chr16 91660701 3 + 98801893 CAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
922 s rn3.chr11 31244370 3 + 87800381 CAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
923 s canFam1.chr31 30690302 3 + 41215879 CAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
924 s fr1.chrUn 314816791 3 - 349519338 TGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
925 s danRer1.chr24 18057475 2 + 23152154 CG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
926
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
927 a score=36.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
928 s hg17.chr21 33321117 7 + 46944323 TAAGGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
929 s fr1.chrUn 314816791 7 - 349519338 TGAAGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
930 s danRer1.chr24 18057474 7 + 23152154 CCGGTGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
931
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
932 a score=260.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
933 s hg17.chr21 33321120 4 + 46944323 GGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
934 s panTro1.chr22 33286991 4 + 47338174 GGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
935 s mm5.chr16 91660704 4 + 98801893 GGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
936 s rn3.chr11 31244373 4 + 87800381 GGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
937 s canFam1.chr1 91988693 4 - 124897793 catc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
938 s fr1.chrUn 314816794 4 - 349519338 AGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
939 s danRer1.chr24 18057477 4 + 23152154 GTGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
940
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
941 a score=24176.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
942 s hg17.chr21 33321124 110 + 46944323 AGCAGCGGCAGCGCCTTCACTGGGGGCACCGTGTC--------CTCGTCCACCCCGAGTGACTGCCCGCCGGAGCT----GAGCGCCGAGCTGCGCG-GCGCTATGGGCTCTGCGGGCGCGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
943 s panTro1.chr22 33286995 110 + 47338174 AGCAGCGGCAGCGCCTTCACTGGGGGCACCGTGTC--------CTCGTCCACCCCGAGCGACTGCCCGCCGGAGCT----GAGCGCCGAGCTGCGCG-GCGCTATGGGCTCTGCGGGCGCGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
944 s mm5.chr16 91660708 110 + 98801893 GGAAGCAGCAGCGGCTTCACAGGAGGGACTGTGTC--------CTCGTCCACGCCGAGCGACTGCCCGCCAGAGCT----GAGCTCCGAGCTACGAG-GGGCCATGGGCGCGTCAGGCGCGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
945 s rn3.chr11 31244377 110 + 87800381 GGAAGCAGCAGCGGCTTCACAGGAGGAACCGTGTC--------CTCATCCACGCCGAGCGACTGCCCGCCAGAGCT----GAGCTCCGAGCTGCGAG-GAGCCATGGGCACGGCGGGCGCGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
946 s canFam1.chr1 91988697 97 - 124897793 accaccgccaccaccaccaccaGGAGAGCCGTCTCAACTCGGTCTCCTCCACTCAGGGCGACATGGTGCAGAAGAT----GCCCGGGGAG---------------AGTCTCT-------CGCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
947 s galGal2.chr3 53622772 75 + 108638738 ---------AGCCGCCTCA--------ACCCCGT---------CTCTTCCACGCAGGGCGACCTGGTGCAGAAGAT----GGCCGGGGAG---------------GGCCTGGCCCGGGGC---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
948 s fr1.chrUn 314816798 83 - 349519338 --ATCCGTGCACGGCTTCTCCGGA---ACCGTGTC--------C---TCCACGCAGAGCGACTCCCCGCCGGACAT-------CGGGAGCCTGCGC---------GGCCTCTCCG--------
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
949 s danRer1.chr24 18057481 91 + 23152154 AGCCCGGGGGGCG-----AGCGGGCACGCTGGGTC---------------------------TGCCGACCGGATCTTTGTGTGTGAAATACGGCGAGAGCGCCAACAGGACTTCAGGCGCGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
950
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
951 a score=6480.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
952 s hg17.chr21 33321234 22 + 46944323 TCCTGGGGACAAGCTAGGAGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
953 s panTro1.chr22 33287105 22 + 47338174 TCCTGGGGACAAGCTAGGAGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
954 s mm5.chr16 91660818 22 + 98801893 TCCCGGGGACAAACTGGGCGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
955 s rn3.chr11 31244487 22 + 87800381 TCCCGGGGACAAACTGGGCGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
956 s canFam1.chr1 91988794 22 - 124897793 GGCCGGCGCCAAGGCCACGGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
957 s galGal2.chr3 53622847 18 + 108638738 ----GGCCCCAAGGCGCAGGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
958 s fr1.chrUn 314816881 12 - 349519338 --CCACTGACGAGG--------
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
959
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
960 a score=215890.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
961 s hg17.chr21 33321256 192 + 46944323 AGTGGCTTCAAGTCATCCTCGTCCAGCACCTCGTCGTCTACGTCG-TCGGCGGCTGCGTCGTCCACCAAGAAGGACAAGAAGCAAATGACAGAGCCGGAGCTGCAGCAGCTGCGTCTCAAGATCAACAGCCGCGAGCGCAAGCGCATGCACGACCTCAACATCGCCATGGATGGCCTCCGCGAGGTCATGCCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
962 s panTro1.chr22 33287127 192 + 47338174 AGTGGCTTCAAGTCATCCTCGTCCAGCACCTCGTCGTCTACGTCG-TCGGCGGCTGCGTCGTCCACCAAGAAGGACAAGAAGCAAATGACAGAGCCGGAGCTGCAGCAGCTGCGTCTCAAGATCAACAGCCGCGAGCGCAAGCGCATGCACGACCTCAACATCGCCATGGATGGCCTGCGCGAGGTCATGCCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
963 s mm5.chr16 91660840 192 + 98801893 GGTGGCTTCAAGTCATCTTCCTCCAGCACCTCCTCGTCCACGTCC-TCGGCGGCCACGTCTTCCACCAAGAAAGACAAGAAGCAGATGACTGAGCCCGAGCTGCAGCAGCTGCGCCTGAAGATCAACAGCCGCGAACGCAAGCGCATGCACGACCTCAACATCGCCATGGACGGCCTGCGGGAGGTCATGCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
964 s rn3.chr11 31244509 192 + 87800381 GGTGGCTTCAAGTCATCTTCCTCCAGCACCTCCTCGTCCACGTCG-TCGGCGGCCACGTCTTCCACCAAGAAAGATAAGAAGCAGATGACTGAGCCCGAGCTGCAGCAGCTGCGCCTGAAGATCAACAGCCGCGAGCGCAAGCGCATGCACGACCTCAACATCGCCATGGACGGCCTGAGGGAGGTCATGCCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
965 s canFam1.chr1 91988816 138 - 124897793 GAGAGTAGCAAGT-------------------------------------------------------ACAAAATCAAGAAGCAGCTGTCGGAGCAGGACCTACAGCAATTACGGCTGAAGATCAACGGCCGCGAGCGCAAGCGGATGCACGACCTCAACCTAGCCATGGACGGGCTGCGCGAGGTCATGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
966 s galGal2.chr3 53622865 138 + 108638738 GAGGGCGGCAAGT-------------------------------------------------------ACAAGATCAAGAAGCAGCTCTCGGAGCAGGACCTGCAGCAGCTGCGGCTCAAGATCAACGGGCGGGAGCGCAAGCGGATGCACGACCTCAACCTGGCCATGGACGGGCTGCGGGAGGTGATGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
967 s fr1.chrUn 314816893 149 - 349519338 ------------------------AGTCCCTCGCCATCCG--------------------GCTCGCAAAGAAAGATCGGAAAGTGCTTTCGGACAACGAACTGCAGACGATCCGCCTCAAAATCAACAGCCGCGAGAGGAAAAGGATGCACGACCTCAACGTGGCCATGGACGGACTCCGGGAAGTCATGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
968 s danRer1.chr25 10119771 182 - 17189730 AGCTGCTGCAGAAGATGGCCAGCGAGCACCTC----TCCAAGACGCCCAGCGGCAGCAAGT-------ACAAGCTGAAGAAGCAGGTGACCGAGCATGAGATCCAGCAGCTGCGGCTCAAGATCAACGGGAGGGAGCGCAAGCGCATGCACGACCTGAATTTGGCGATGGACGGGCTCCGAGAGGTCATGCCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
969
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
970 a score=323301.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
971 s hg17.chr21 33321448 176 + 46944323 TACGCACACGGCCCTTCGGTGCGCAAGCTTTCCAAGATCGCCACGCTGCTGCTGGCGCGCAACTACATCCTCATGCTCACCAACTCGCTGGAGGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGG------------C------CACCACGCTGGCTTCCACCCGTCGGCCTGCGGCGGCCTGGCGCACTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
972 s panTro1.chr22 33287319 176 + 47338174 TACGCACACGGCCCTTCGGTGCGCAAGCTTTCCAAGATCGCCACGCTGCTGCTGGCGCGCAACTACATCCTCATGCTCACCAACTCGCTGGAGGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGG------------C------CACCACGCTGGCTTCCACCCGTCGGCCTGCGGCGGCCTGGCGCACTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
973 s mm5.chr16 91661032 176 + 98801893 TACGCGCACGGGCCGTCGGTGCGCAAGCTCTCCAAGATCGCCACGCTGCTGCTGGCGCGAAACTACATCCTCATGCTCACCAACTCGCTGGAGGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGG------------T------CACCACGCCGGCTTCCACCCATCGGCCTGTGGCGGGCTGGCACACTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
974 s rn3.chr11 31244701 176 + 87800381 TACGCGCACGGCCCGTCGGTGCGCAAGCTCTCCAAGATCGCCACGCTGCTGCTGGCGCGAAACTACATCCTGATGCTCACCAACTCGCTGGAGGAGATGAAGAGACTGGTGAGCGAGATTTACGGGGG------------T------CACCACGCCGGCTTCCACCCGTCGGCCTGTGGCGGGCTGGCACACTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
975 s canFam1.chr1 91988954 167 - 124897793 TACGCGCACGGGCCCTCGGTGCGCAAGCTCTCCAAGATCGCCACTCTCCTGCTGGCCAGAAACTACATCCTCATGCTCACCAGCTCCCTGGAGGAGATGAAGAGGTTGGTTGGCGAGATCTACGGGGG------------C------CACCACTCTGCCTTCCA---------CTGCGGGACCGTGGGCCACTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
976 s galGal2.chr3 53623003 167 + 108638738 TACGCGCACGGCCCCTCCGTCCGGAAACTCTCCAAAATCGCCACCCTGCTGCTGGCCAGAAACTACATCCTGATGCTCACCAGCTCCCTGGAGGAGATGAAGCGCCTGGTGGGGGAGATCTACGGTGG------------C------CACCACTCGGCCTTCCA---------CTGCGGCACCGTGGGCCACTc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
977 s fr1.chrUn 314817042 182 - 349519338 TACGCGCACGGACCGTCGGTGCGCAAACTCTCCAAAATCGCCACGCTGCTCCTGGCGAGAAATTACATCCTGATGCTGAGCAACTCGCTGGAAGAGATGAAGCGGCTGGTGAGCGAGATCTACGGCAG------------CGGCGCACACCACGGTGGCTTCCACCCGACAGCTTGTGGGACAATGACACACGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
978 s danRer1.chrNA 310476113 188 - 390413307 TACGCTCACGGGCCGTCTGTGCGCAAGCTCTCTAAAATAGCCACTCTGCTGCTCGCGCGCAACTACATCCTTATGCTGAGCAACTCGCTGGAGGAGATGAAGCGGCTCGTGAGCGAGATCTACGGCGGAGGGAGCGGGGCC------CATCACGCCGGTTTCCATCCGTCCAGTTGTGGCACTCTTACGCACGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
979
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
980 a score=23510.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
981 s hg17.chr21 33321624 71 + 46944323 CGCGCCCCTGCCC-GCCGC-----------CACCGCGCACCCGGCAGCAGCAG-CGCACGCCGCACATCACCCCGCGGTGCACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
982 s panTro1.chr22 33287495 71 + 47338174 TGCGCCCCTGCCC-GCCGC-----------CACCGCGCACCCGGCAGCAGCAG-CGCACGCCGCACATCACCCCGCGGTGCACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
983 s mm5.chr16 91661208 71 + 98801893 GGCGCCTCTACCC-ACCGC-----------CACGGCGCACCCCGCGGCCGCCG-CGCACGCCGCGCACCACCCGGCCGTGCACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
984 s rn3.chr11 31244877 71 + 87800381 GACGCCTCTACCC-ACCGC-----------CACGGCGCACCCTGCAGCCGCCG-CGCACGCCGCGCACCACCCGGCGGTGCATC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
985 s canFam1.chr1 91989121 45 - 124897793 CGC-----------------------------CGGC-CACCCAGCACACGCCG-CCAACGCCGTGCACC------CGGTGCA--
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
986 s galGal2.chr20 5296387 84 - 13506680 CACGGCCTTGCCCGGCTGCCCCGAGAAATGCACTGCCTTCACAGGAGCCGCCTCCGCGCTCTGCAAACACTGCAGCGACAAGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
987 s fr1.chrUn 314817224 56 - 349519338 GGGGCCCGTGCCGGGACAC-----------CCGAGCACAT--------------CTCACAGCTCACACC---CGGCGGTGCACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
988 s danRer1.chrNA 310476301 62 - 390413307 GGCGGCGGCTCC--GTTAC-------------CGGGTCACCCCGCTGCTGTCT-CGCATTCCTCTCACC------CGGTGCACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
989
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
990 a score=9256.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
991 s hg17.chr21 33321695 9 + 46944323 A-CCCCATCc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
992 s panTro1.chr22 33287566 10 + 47338174 AACCCCATCc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
993 s mm5.chr16 91661279 9 + 98801893 A-CCCCATCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
994 s rn3.chr11 31244948 9 + 87800381 A-CCCCATCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
995 s canFam1.chr1 91989166 8 - 124897793 --CCCCATCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
996 s fr1.chrUn 314817280 9 - 349519338 A-CCCGCTCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
997 s danRer1.chrNA 310476363 9 - 390413307 A-TCCTCTGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
998
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
999 a score=14345.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1000 s hg17.chr21 33321704 48 + 46944323 tgccgcccgccgccgcagcggctgctgccgccgctgcagccgcggctg
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1001 s panTro1.chr22 33287576 48 + 47338174 tgccgcctgccgccgcagcggctgctgccgccgctgcagccgcggctg
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1002 s mm5.chr16 91661288 48 + 98801893 TCCCTCCCGCAGCCGCCGCCGCCGCCGCAGCCGCCGCCGCCGCAGCGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1003 s rn3.chr11 31244957 48 + 87800381 TCCCTCCAGCAGCCGCGGCCGCAGCCGCCGCAGCCGCTGCCGCAGCGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1004 s canFam1.chr1 91989174 39 - 124897793 TG------GGCGGCGCGCTCTCGTCCGGCAACGCCTC-GTCGCCGC--
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1005
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1006 a score=4230.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1007 s hg17.chr21 33321752 3 + 46944323 TGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1008 s panTro1.chr22 33287624 3 + 47338174 TGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1009 s mm5.chr16 91661336 3 + 98801893 TGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1010 s rn3.chr11 31245005 3 + 87800381 TGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1011 s canFam1.chr1 91989213 3 - 124897793 TGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1012 s fr1.chrUn 314817304 3 - 349519338 TGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1013
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1014 a score=2889.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1015 s hg17.chr21 33321755 6 + 46944323 CCAGCG---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1016 s panTro1.chr22 33287627 6 + 47338174 CCAGCG---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1017 s mm5.chr16 91661339 6 + 98801893 CCAGCG---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1018 s rn3.chr11 31245008 6 + 87800381 CCAGCG---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1019 s canFam1.chr1 91989216 6 - 124897793 CCGCCG---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1020 s fr1.chrUn 314817307 6 - 349519338 CCACGG---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1021 s danRer1.chrNA 310476387 9 - 390413307 CCACCGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1022
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1023 a score=65057.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1024 s hg17.chr21 33321761 77 + 46944323 CCTCTCTGCCCGGATCCGGGCTGCCGTCGGTCGGCTCCATCCGTCCACCGCACGGCCTACTCAAGTCTCCGTCTGCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1025 s panTro1.chr22 33287633 77 + 47338174 CCTCTCTGCCCGGATCCGGGCTGCCGTCGGTCGGCTCCATCCGTCCACCGCACGGCCTACTCAAGTCTCCGTCTGCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1026 s mm5.chr16 91661345 77 + 98801893 CCTCTCTACCGGGCTCCGGGCTGTCCTCGGTCGGATCCATCCGGCCTCCGCACGGCCTGCTCAAGTCACCGTCGGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1027 s rn3.chr11 31245014 77 + 87800381 CTTCTCTGCCGGGCTCCGGGCTGTCCTCGGTCGGATCCATCCGGCCTCCTCACGGCCTGCTCAAGTCTCCATCGGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1028 s canFam1.chr1 91989222 60 - 124897793 CCTCGCTGCCGG---------------CCATCGGCACCATTCGACCTCCCCACTCTCTGCTCAAGGCGCCCTCCA--
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1029 s galGal2.chr3 53623259 74 + 108638738 CGTCGCTGCCAG---CCTCGCTGCCGGCCCTGGGCACCATCCGGCCGCCCCACTCCCTGCTGAAGACCCCCTCCACT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1030 s fr1.chrUn 314817313 77 - 349519338 CGTCTCTGTCGGCACCTGGCATCGCCGCCGTCACATCTGTCAGACCTCATCATGGACTCCTCAAAGCTCCCGGTACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1031 s danRer1.chrNA 310476396 68 - 390413307 CATCTCTTTCCGGGACGGGGCTTTCAGCCGTCA---------GGCCGCATCACGGACTCCTCAAAGCCCCGTCAGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1032
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1033 a score=100.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1034 s hg17.chr21 33321838 1 + 46944323 g
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1035 s danRer1.chrNA 310476464 1 - 390413307 G
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1036
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1037 a score=16973.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1038 s hg17.chr21 33321838 36 + 46944323 gccgcggccgccccgctggggggcgggggcggcggc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1039 s panTro1.chr22 33287710 36 + 47338174 GCCGCAgccgccccgctggggggcgggggcggcggc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1040 s mm5.chr16 91661422 36 + 98801893 GCCGCAGCCGCCCCTCTCGGAGGCGGGGGTGGAGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1041 s rn3.chr11 31245091 36 + 87800381 GCCGCGGCCGCCCCTCTCGGAGGCGGGGGTGGAGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1042 s canFam1.chr1 91989282 15 - 124897793 --CGCCGCCGGCCCT-------------------GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1043
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1044 a score=-1380.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1045 s hg17.chr21 33321838 36 + 46944323 gccgcggccgccccgctggggggcgggggcggcggc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1046 s fr1.chrUn 314817391 1 - 349519338 G-----------------------------------
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1047
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1048 a score=627.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1049 s hg17.chr21 33321874 1 + 46944323 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1050 s panTro1.chr22 33287746 1 + 47338174 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1051 s mm5.chr16 91661458 1 + 98801893 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1052 s rn3.chr11 31245127 1 + 87800381 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1053 s canFam1.chr1 91989297 1 - 124897793 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1054 s galGal2.chr3 53623346 1 + 108638738 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1055 s fr1.chrUn 314817392 1 - 349519338 T
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1056
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1057 a score=101521.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1058 s hg17.chr21 33321875 67 + 46944323 GTGGGGC----GAGCGGGGGCTTCCAGCACTGGGG---------C---GGCATGCCCTGCCCCTGCAGCATGTGCCAGGTGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1059 s panTro1.chr22 33287747 67 + 47338174 GTGGGGC----GAGCGGGGGCTTCCAGCACTGGGG---------C---GGCATGCCCTGCCCCTGCAGCATGTGCCAGGTGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1060 s mm5.chr16 91661459 67 + 98801893 GCGGTGG----CAGCGGTGGCTTCCAGCACTGGGG---------C---GGCATGCCGTGCCCCTGCAGCATGTGCCAGGTGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1061 s rn3.chr11 31245128 67 + 87800381 GCGGTGG----CAGCGGTGGCTTCCAGCACTGGGG---------T---GGCATGCCGTGCCCCTGCAGCATGTGCCAGGTGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1062 s canFam1.chr1 91989298 63 - 124897793 GCTGG--------GCAGCGGCTTCCAGCACTGGGC---------C---GGGCTGCCCTGCCCCTGCACCATCTGCCAGATGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1063 s galGal2.chr3 53623347 63 + 108638738 GCTCG--------GCGGAGGCTTCCAGCACTGGGC---------C---GGCTTGCCGTGCCCCTGCACCATCTGCCAGGTGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1064 s fr1.chrUn 314817393 80 - 349519338 GCGGGGCCCCTGGGAAGCAGTTTCCAGCACTGGGGTGTGGGCACC---GGGATGCCTTGTCCGTGCAGCATGTGCCAAGTTCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1065 s danRer1.chrNA 310476467 74 - 390413307 GCTGGGCCTCTGGGCGCGGGTTTCCAGCACTGGGG---------TGCGGGGATCCCTTGTCCGTGTAGCATGTGCCAGGTGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1066
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1067 a score=77095.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1068 s hg17.chr21 33321942 70 + 46944323 GCCGCCGCACCACCACGTGTCGGCTATGGGCGCCGGCAGCCTGCCGCGCCTCACCTCCGACGC------------CAAG-TGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1069 s panTro1.chr22 33287814 70 + 47338174 GCCGCCGCACCACCACGTGTCGGCCATGGGCGCCGGCAGCCTGCCGCGCCTCACCTCCGACGC------------CAAG-TGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1070 s mm5.chr16 91661526 70 + 98801893 GCCGCCGCACCACCACGTGTCGGCTATGGGCGCCGGCACCTTGCCGCGCCTCACCTCCGACGC------------CAAG-TGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1071 s rn3.chr11 31245195 70 + 87800381 GCCGCCACACCACCACGTGTCGGCTATGGGCGCCGGCACCTTGCCGCGCCTCACCTCCGACGC------------CAAG-TGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1072 s canFam1.chr31 30691121 70 + 41215879 GCCGCCGCACCCCCACGTGCCGGCCATGGGCGGGGGCAGCCTGCCGCGCCTTGCCTCCGACGC------------CAAG-TGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1073 s galGal2.chr3 53623413 76 + 108638738 CCCGCCGCACCTC------TCTGCCCTCTCCGCCTCCGGCATGGGCCGGATCTCGGCGGACACCAAGGACCTGCTCAAG-TGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1074 s fr1.chrUn 314817473 65 - 349519338 CCCTCCACACGTC------CCGGCCATCAGTACCGTTACCATGTCAAGGCTGTCCAGCGACTC------------CAAGTTGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1075 s danRer1.chrNA 310476541 64 - 390413307 TCCGTCTCACGTT------CCCGGTATGAGCGCCGTCAGCATGCCACGGCTGACCAGTGACTC------------AAAA-TAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1076
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1077 a score=113636.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1078 s hg17.chr21 33744994 2 + 46944323 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1079 s panTro1.chr22 33720891 2 + 47338174 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1080 s mm5.chr16 92040468 2 + 98801893 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1081 s rn3.chr11 31574511 2 + 87800381 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1082 s canFam1.chr31 31078278 2 + 41215879 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1083
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1084 a score=61167.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1085 s hg17.chr21 33744996 44 + 46944323 AGGTCCATAGCTCTTCGGTTCTTCCAAATTTGTAGATCAGAGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1086 s panTro1.chr22 33720893 44 + 47338174 AGGTCCATAGCTCTTCGGTTCTTCCAAATTTGTAGATCAGAGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1087 s mm5.chr16 92040470 44 + 98801893 AGGCCCAGAGCTCTTCAGTTCTTCCAAATTTGTAGATCAGAGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1088 s rn3.chr11 31574513 44 + 87800381 AGGCCCAGAGCTCTTCAGTTCTTCCGAATTTGTAGATCAGAGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1089 s canFam1.chr31 31078280 44 + 41215879 AGGTCCAAAGCTCTTCAGTTCTTCCAAATTTGTAGATCAGAGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1090 s fr1.chrUn 305707709 44 + 349519338 AGCCCCATAAATCTTCAGTGCGTCCGAACTTGTAGATCAGGGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1091
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1092 a score=71764.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1093 s hg17.chr22 30120223 42 + 49554710 ATGAGCAGCACCTTAGCTAAGATCGCGGAGATAGAAGCAGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1094 s panTro1.chr23 30222612 42 + 50034486 ATGAGCAGCACCTTAGCTAAGATCGCGGAGATAGAAGCAGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1095 s mm5.chr11 118487759 42 - 121648857 ATGAGCGGGACCTTAGCGAAGATCGCGGAGATCGAAGCCGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1096 s rn3.chr14 28338530 42 - 112220682 ATGAGTGGGACCTTAGCGAAGATCGCGGAGATCGAAGCCGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1097 s canFam1.chr26 27465575 42 + 41009621 ATGAGCAGCACCTTAGCGAAGATCGCGGAGATCGAAGCCGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1098 s galGal2.chr15 3499721 42 - 12438626 ATGAGTGGGACTCTGGCGAAGATCGCGGAGATCGAGGCTGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1099 s fr1.chrUn 242087985 39 - 349519338 ATGAGT---ATTCTTGCTAAAATAGCAGAGATTGAAAATGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1100
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1101 a score=249684.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1102 s hg17.chr22 30160419 187 + 49554710 TCACTGTCGGTATTCCAATTCATCTACACTGATAACTTTGGCG---GGCATGGAGGGCAGGGGTTGCTGTAGCACATCTGAGCCAAACCATTTGGCAAGGCCCACAGGGGAGCT------GCTCCTCTGGCTGGGGCGATGCTCCAGCTGGGA--GTGCATGTGGGGCAGGCCTGACCGGCTGGGCACGTTCTGAGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1103 s panTro1.chr23_random 7588856 187 - 16744317 TCACTGTCGGTATTCCAATTCATCTACACTGATAACTTTGGCG---GGCATGGAGGGCAGGGGTTGCTGTAGCACATCTGAGCCAAACCATTTGGCAAGGCCCACAGGGGAGCT------GCTCCTCTGGCTGGGGCGATGCTCCAGCTGGGA--GTGCATGTGGGGCAGGCCTGACCGGCTGGGCACGTTCTGAGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1104 s mm5.chr11 118509980 187 - 121648857 TCACTGTCTATATTCCAGTTCATCTACACTGATGACTTTGGTG---GGCATGGAGGGCAGAGGCTGCTGTAGCACATCTGAGCCAAACCATTTGGCAAGGCCCACAGGGGAGCT------GCTCCTTTGGCTGGTACGATGCTCCAGCTGGGA--GTGCATGTGGGGCATGCCCGACCGGCTGGGTACATTCTGAGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1105 s rn3.chr14 28360090 187 - 112220682 TCACTGTCTATATTCCAGTTCATCTACACTGATGACTTTGGTG---GGCATGGAGGGCAGAGGCTGCTGTAGCACATCTGAGCCAAACCACTTGGCAAGACCCACGGGGGAGCT------GCTCCTTTGGCTGGTGCGATGCTCCAGCTGGGA--GTGCATATGGGGCAGGCCTGACCGGCTGGGTACATTCGGAGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1106 s canFam1.chr26 27493563 187 + 41009621 TCATTGACGGTACTCCAATTCATCTACACTGATGACTTTGGCA---GGCATGGAGGGCAGGGGTTGCTGTAGCACATCTGAGCCAAACCACTTAGCGAGGCCTACTGGGGAGCT------GCTCCTCTGGCTGGGGCGATGTTCCAGCTGGGA--GTGCACGTGGGGCAGGCCTGACCTGGTGGGCACATTCTGAGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1107 s galGal2.chr15 3506922 187 - 12438626 TCACTGCCGATATTCCAGTTCATCTACACTGATGACTTTGGAT---GGCATGGAAGGGAGAGGCTGCTGCAAGACATCTGAACCAAACCACTTTGCAAGGCCAATGGGAGAGCC------ACTTCTCTGGCTGGGACGATGGTCGAGCTGCGC--GTGCCCATGAGATAATCCAGTCCGAGACGGCACATTCTGAGGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1108 s danRer1.chrNA 320160139 177 + 390413307 TCACTGGCGGAACTCGAGCTCATCAACACTGATCACTTTAGTGGAAGGCATGGAAGGGAGAGGCTGCTGCAGCATGTCTGAACCAAACCACTTGGCCAGGCCCAGAGGGGGACTTGCACCTCTCCGCTGGTTTGTCCGATG--------GGGACCGTGGCTCTGGGAC-------------TGGGGGCCTCCTGAGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1109
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1110 a score=49183.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1111 s hg17.chr22 30160606 55 + 49554710 GTTGTCTGAACGCTGACAGCTGCTGCATGGGAACCAGAGCCTGGAGGATGCAGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1112 s panTro1.chr23_random 7589043 55 - 16744317 GTTGTCTGAACGCTGACAGCTGCTGCATGGGAACCAGAGCCTGGAGGATGCAGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1113 s mm5.chr11 118510167 52 - 121648857 ---GTCTGAACGCTGATAGCTGCTGCCTGGGAACTAGAGCCTGGAGGATGCAGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1114 s rn3.chr14 28360277 52 - 112220682 ---GTCTGAACGTTGATAGCTGCTGCCTGGGAACTAGAGCCTGGAGGATGCAGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1115 s canFam1.chr26 27493750 55 + 41009621 GTTGTCTGAACGCTGACAGCTGCTGCCGGGGAACCAGAGCCTGGAGGATGAAGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1116 s galGal2.chr15 3507109 55 - 12438626 GTTGTTTGCACACCAGCAGGTGATCCCTGTGCTCCAGTGCCTGTGGAATGTAAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1117
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1118 a score=2821.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1119 s hg17.chr22 30665273 6 + 49554710 ATGGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1120 s panTro1.chr23 30832251 6 + 50034486 ATGGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1121 s mm5.chr5 31452558 6 + 149219885 ATGGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1122 s rn3.chr14 28756724 6 - 112220682 ATGGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1123 s galGal2.chr15 3672628 6 - 12438626 ATGGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1124 s fr1.chrUn 333993217 6 - 349519338 ATGGTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1125 s danRer1.chr10 6576471 6 - 25436222 ATGGCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1126
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1127 a score=177812.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1128 s hg17.chr22 30665279 81 + 49554710 GACCGGGAGCAGCTGCTGCAGCGGGCGCGGCTGGCCGAGCAGGCGGAGCGCTACGACGACATGGCCTCCGCTATGAAGGCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1129 s panTro1.chr23 30832257 81 + 50034486 GACCGGGAGCAGCTGCTGCAGCGGGCGCGGCTGGCCGAGCAAGCGGAGCGCTACGACGACATGGCCTCCGCCATGAAGGCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1130 s mm5.chr5 31452564 81 + 149219885 GATCGAGAGCAGCTGCTGCAGCGGGCGCGACTGGCGGAGCAGGCGGAGCGCTACGACGATATGGCCTCCGCCATGAAGGCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1131 s rn3.chr14 28756730 81 - 112220682 GACCGAGAGCAGCTGCTGCAGCGGGCGCGACTGGCGGAGCAGGCGGAGCGCTACGACGACATGGCCTCCGCCATGAAGGCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1132 s canFam1.chr26 27923330 81 + 41009621 GACCGAGAGCAGCTGCTGCAGCGGGCGCGGCTGGCCGAGCAGGCGGAGCGCTACGACGACATGGCCTCCGCCATGAAGGCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1133 s galGal2.chr15 3672634 81 - 12438626 GACCGAGAGCAGCTGCTGCAGCGAGCCCGCCTGGCCGAGCAGGCGGAGAGATACGACGACATGGCCTCGGCCATGAAGTCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1134 s fr1.chrUn 333993223 81 - 349519338 GACCGCGAGCAGCTGGTGCAGAAAGCCAGGCTGGCTGAACAGGCTGAGAGATATGATGATATGGCCGCTGCAATGAAATCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1135 s danRer1.chr10 6576477 81 - 25436222 GACCGGGAACAACTGATCCAAAGAGCCCGTCTGGCGGAGCAGGCGGAGCGCTATGATGATATGGCCTCCGCGATGAAGCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1136
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1137 a score=239048.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1138 s hg17.chr22 30939054 212 + 49554710 TC-AGGCATAGTAGCCGTGAATAAAGACCACCACAGCCAGGAGGAGGATGGCGTTGATGTTCACTATTGTCCTCCACGAGGGCCTCTCAGACGTGTCTGTGAGCTTCTTGCTCAAGGCTTCCTCCTCCTCCTTGGTTAGCTTGGGTC---CCTTCTG---------CAAACCGCAGAA-CAAGTCATAAGCTTTCTTGAGGCATCCACGTGATTTCTCAGGATAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1139 s panTro1.chr23 31094394 212 + 50034486 TC-AGGCATAGTAGCCGTGAATAAAGACCGTCACAGCCAGGAGGAGGATGGCGTTGATGTTCACTATTGTCCTCCACAAGGGCCTCTCAGACGTGTCTGTGAGCTTCTTGCTCAAGGCTTCCTCCTCCTCCTTGGTTAGCTTGGGTC---CCTTCTG---------CAAACCGCAGAA-CAAGTCATAAGCTTTCTTGAGGCATCCACGTGATTTCTCAGGATAAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1140 s mm5.chr10 54573933 203 - 130633972 TC-AGGCAAAATAGCCATAGAAAAACGCTGCTACAGCCAAGAGGAGGATGACATTGACGTTCATGACCGTCCGCCAGAAGGGCTTCTCTGTTGTGTCTG------------TCAGAGCTTCCTCCTCTACTTTAGTCAACTTGAATTCAGCTCTTTG---------CAAACCACAGAA-TAGGTCACACGTCTTCTTGAGACATCCACGAGGTTTCTCAGTTTGGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1141 s rn3.chr20 12876263 215 + 55296979 TC-AGGCAAAATAGCCATAGAAAAAAGCCGCCACGGCCAAGAGGACAATGACATTGACGTTCACGACCGTCCGCCAGAAGGGCTTCTCGGATGTGTCTGTCAGCTTCTTCTTCAGGGCTTCTTCCTCCTCTTTAGTCAGCTTGGGTTCCGCTCTTTG---------CAAACCACAGCA-TAGGTCATAAGTCTTCTTGAGACATCCACGAGGTTTCTCCGTTTGGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1142 s canFam1.chr26 28103537 215 + 41009621 TC-AGGCAAAATAGCCATGGGCAAAGACAGCCACTGCTAGGAGTAGAATGGCATTGACATTCACTATAGTCCTCCATAAAGGCTTCTCAGATGTGTCTGTCAGCTTCTTTTTCTGGGCTTCTTCCTCTTCTTTGCTCAGTTTGGGACCTGTCTTCTG---------CAAACCACAAAA-TATGTCATAAGCCTTCCTGAGGCATCCACGGGGTTTCTCAGGATTAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1143 s galGal2.chr15 8705700 216 + 12438626 CCTATGCAAAAAAGGCATGGCAAAATACAGCCACAGTCAGTAGGATGATGCCGTTGATATTCACAACATTCCTCCAAAGTGGCACTTCTGATGTGTCAGTCAGTTTCTTCTTCAGCGCTTCCTCTTCCTCCTTGCTCAGTTTGGGTC---CTTTTTG---TTGGTCTAAGCCACAGAA-CCAGTTGTAAGCTTTCTTTAGGCATCC---TGGGTCTTCACTTTCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1144 s fr1.chrUn 241992320 217 - 349519338 TT-ACGCGAAAAAGCCGTGGCAGAAGAAAGCGACAGCCAGGAGGATGAGGGCGTTGACGTTGACCACGTTCCTCCACAGCGGCTTCTCCGAGGTGTCCGTGAGCTTCCGCTTCATCTCGGCTTCTTCTTCCGGGGTCAGTTTGA------CCGTTTGGTTCTGTTCCAGCCCGCAGAAGCACATCAC-CGCCTTCTTGC-ACAGACCCGGTTGTTCTTGGGGTTCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1145 s danRer1.chrUn 30145435 215 + 367113659 TT-AACCGAAGAAACCGTGGAAAAAGACGCAGACGGTGAGGAGGATAACGGCGTTAGCGTTGACCACATTTCTCCATAGAGGTTTCTCAGTGGTGTCGGTGAGCTTCATCTTCAGCTCAGCCTCCTGTTCTTTAGTCAGTTTGGGAGCATTGCCTTG------ATCGAAGCCGCAGAA-CCAGTTGTAGGCCTTCTTACAACAGCC---TGGCTCCTCACGCATCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1146
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1147 a score=593066.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1148 s hg17.chr5 131424298 81 + 180857866 ATGAGCCGCCTGCCCGTCCTGCTCCTGCTCCAACTCCTGGTCCGCCCCGGACTCCAAGCTCCCA----TGACCCAGACAACGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1149 s panTro1.chr4 137757118 81 + 188378868 ATGAGCCGCCTGCCCGTCCTGCTCCTGCTCCAACTCCTGGTCCGCCCCGGACTCCAAGCTCCCA----TGACCCAGACAACGTCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1150 s mm5.chr11 67741889 85 - 121648857 ACCAGCATCCACACCATGCTGCTCCTGCTCCTGATGCTCTTCCACCTGGGACTCCAAGCTTCAATCAGTGGCCGGGATACCCACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1151 s rn3.chr10 71032732 73 - 110733352 ACCAGCATCCTCTGCATGCTGCTTCCGCTCCTGATGCTCTTCCACCAGGGACTCC-AGTTTTCA-----------GGCAGTGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1152 s canFam1.chr11 21697475 75 + 75769841 ATGAGCAGCTTCCCCATCCTGCACCTTCTCTTGCTCCTG------CTTGGATGCCAAGTCCCAC----AGGCACAGGGGAGGCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1153
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1154 a score=7416.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1155 s hg17.chr5 131424379 81 + 180857866 TTGAAGACAAGCTGGGTTA---ACTGCTCTAACATGATCGATGAAATTATAACACACTTAAAGCAGCCACCTTTGCCTTTGCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1156 s panTro1.chr4 137757199 81 + 188378868 TTGAAGACAAGCTGGGTTA---ACTGCTCTAACATGATCGATGAAATTATAACACACTTAAAGCAGCCACCTTTGCCTTTGCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1157 s mm5.chr11 67741976 57 - 121648857 TTAACCAGAACGTTGAATT---GCAGCTCT---ATTGTCAAGGAGATTATAG------GGAAGCTCCCA---------------
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1158 s canFam1.chr11 21697550 84 + 75769841 TTTTCGACAGACCTGCCTAAGCAATACTTCACAATGATCAATGAAATTATGGAGATGTTAAACAAGTCACCCTCGCCTTCAGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1159
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1160 a score=137534.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1161 s hg17.chr5 131556601 71 + 180857866 TCAGTCAACTTCTGTTGATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATGGAACCACTTATTGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1162 s panTro1.chr4 137889227 71 + 188378868 TCAGTCAACTTCTGTTGATCCACAAGGTCTCAAGAACTCCTGTCCTCGTTCATGGAACCACTTATTGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1163 s mm5.chr11 67877858 71 - 121648857 TCAATCAACTTCCGTTGTTCCACAAGGTCTTAAGAACTCCTGTCCTCGCTCATGGAACCACTTGTTGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1164 s rn3.chr10 71169107 71 - 110733352 TCAATCGACTTCCGTTGTCCCACAAGGCCTCAAGAACTCCTGTCCTCGCTCATGGAACCACTTATTGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1165 s canFam1.chr11 21882340 71 + 75769841 TCAGTCAACTTCTGTTGATCCACATGGCCTCAAGAATTCCTGTCCTCGTTCATGGAACCACTTATTGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1166 s galGal2.chr13 15754170 71 + 17279963 TCAGTCAACCTCTGTTCTCCCACAGGGTCTTAAGAATTCGTTTCCTCTTTCATGAAACCATTTGTTTGAAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1167 s fr1.chrUn 144469271 71 + 349519338 TCAATCCACTTCTGTCAAACCGCAGGGTCTCCTGAATTCTTGACCTCGCTCATGAATCCACTTGTTCGACA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1168 s danRer1.chr17 23182922 71 - 35757233 TCATTCCACCTCAGATAATGCACAGGGCCGTCTGAATTCTTGACCTCGTTCATGTATCCATTTGTTCGATA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1169
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1170 a score=153108.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1171 s hg17.chr5 131621326 93 + 180857866 ATGCCCCATTCCGTGACCCTGCGCGGGCCTTCGCCCTGGGGCTTCCGCCTGGTGGGCGGCCGGGACTTCAGCGCGCCCCTCACCATCTCACGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1172 s panTro1.chr4 137954377 93 + 188378868 ATGCCCCATTCCGGGACCCTGCGCGGGCCTTCGCCCTGGGGCTTCCGCCCGGAGGGCGGCCGGGACTTCAGCGCGCCCCTCACCATCTCACGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1173 s mm5.chr11 67940186 93 - 121648857 ATGACCCACTCGGTGACCCTGCGCGGCCCTTCACCCTGGGGCTTCCGCCTGGTGGGCGGCCGGGACTTCAGTGCTCCCCTCACCATCTCGCGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1174 s rn3.chr10 71238657 93 - 110733352 ATGACCCACTCGGTGACCCTGCGCGGCCCTTCACCCTGGGGCTTCCGCCTGGTGGGCGGCCGTGACTTCAGTGCCCCCCTCACCATCTCGCGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1175 s canFam1.chr11 21937834 93 + 75769841 ATGCCGCACTCCGTGACCCTACGCGGCCCGTCGCCCTGGGGCTTCCGCCTGGTAGGCGGCCGGGACTTCAGCGCACCCCTCACCATCTCGCGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1176 s fr1.chrUn 144492794 93 + 349519338 ATGTCGCAGACCGTTACACTAAAGGGACCCTCTCCTTGGGGGTTCCGGCTGGTGGGAGGACGCGATTTCAGCACCCCGTTAACCATCTCCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1177 s danRer1.chrUn 204956892 93 + 367113659 ATGTCTCACACTGTGACTCTCAGCGGTCCCTCGCCCTGGGGTTTTCGGCTGGTGGGTGGACGAGACTTCAGCACACCGCTCACCATTTCCAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1178
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1179 a score=705535.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1180 s hg17.chr5 131847541 125 + 180857866 CTACGGTGCACAGGGAATGGCCTGGATGGAG---GGCAACCGGACTGGGGT---CAGCAGGCTGTCCAGCCA---GGTGGCATCCATGTTCTTCAGATCTGTGAAGACACGCTGTAGACTCAGCCCAATATCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1181 s panTro1.chr4 138180513 125 + 188378868 CTACGGTGCACAGGGAATGGCCTGGATGGAG---GGCAACCGGACTGGGGT---CAGCAGGCTGTCCAGCCA---GGTGGCATCCATGTTCTTCAGATCTGTGAAGACACGCTGTAGACTCAGCCCAATATCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1182 s mm5.chr11 68232672 134 - 121648857 CTATGGTGCACAAGGAATGGCCTGAATAGAGGGCGGCAGCCTCACAGAGTTGCCCAGCAGGCTGTCCATCCACATGATGGAGTCCATATTCTTCATCTCCGTGAAGACATGTTGTATGCCTATCCCAATGTCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1183 s rn3.chr10 71497371 131 - 110733352 TTATGGTGCACAAGGAATAGCCTGAATGGAG---GGCGGCCTGGTAGAGTTGCCCAGCAGGGTGTCCATCCACATGACGGGGTCCATATTCTTCATCTCTGTGAAGACACGCTGTATGCCTATCTCGATGTCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1184 s canFam1.chr11 22141585 113 + 75769841 CTATGGTGCACAAGGAATGGCCTGGATGGAG---GGCAGTCTGACTGGAGT---CAACAGGCTGTCCAGCCA---GCTGGTGTCCATGTTCTTCAGATCTGAAGAGA------------TCAGCCCAACATACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1185
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1186 a score=0.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1187 s hg17.chr6 108299600 2 + 170975699 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1188
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1189 a score=2325.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1190 s hg17.chr6 108299600 2 + 170975699 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1191 s panTro1.chr5 110600637 2 + 175429504 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1192 s mm5.chr10 87897895 2 - 130633972 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1193 s rn3.chr20 8534936 2 - 55296979 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1194 s canFam1.chr12 67925618 2 + 75455811 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1195 s galGal2.chr3 42632727 2 - 108638738 TT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1196 s fr1.chrUn 159061419 2 + 349519338 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1197
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1198 a score=237362.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1199 s hg17.chr6 108299602 142 + 170975699 AGTCATCATCTTCTTCTTCCTCCTCTTCTTCCTCAAAGCTATCTTCAAAGCCCTCACTGTCCTCCTGGTCTTCATCCCCCTCTATTGC------TGTATCCCACTGTGGGTGATTTTCTGGCACAGGCTTAGCCTCATGAACTTCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1200 s panTro1.chr5 110600639 142 + 175429504 AGTCATCATCATCTTCTTCCTCCTCTTCTTCCTCAAAGCTATCTTCAAAGCCCTCACTGTCCTCCTGGTCTTCATCCCCCTCTATTGC------TGTATCCCACTGTGGGTGATTTTCTGGCACAGGCTTAGCCTCATGAACTTCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1201 s mm5.chr10 87897897 142 - 130633972 AGTCTCCACCTTCCTCTTCCTCCTCCTCTTCCTCAAAGCTGTCTTCAAATCCTTCACTGTCTTCCTGGTCTTCGTCACCTTCTATCGC------TGTGTCCCACTGTGGGTGGTTTTCTGGCACAGGCTTGGCCTCATGAACTTCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1202 s rn3.chr20 8534938 142 - 55296979 AGTCACCACCCTCCTCTTCCTCCTCCTCTTCCTCAAAGCTGTCTTCAAATCCTTCACTGTCTTCCTGGTCTTCGTCACCTTCTATTGC------TGTGTCCCACTGTGGGTGGTTTTCTGGCACGGGCTTGGCCTCATGAACTTCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1203 s canFam1.chr12 67925620 142 + 75455811 AGTCATCATCTTCCTCCTCTTCTTCCTCCTCCTCAAAGCTATCTTCAAAGCCTTCGCTGTCCTCCTGGTCTTCATCCCCCTCTATTGC------TGTATCCCACTGTGGGTGATTTTCTGGTACAGGCTTAGCCTCATGAACTTCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1204 s galGal2.chr3 42632729 142 - 108638738 AATCATCATCTTCCTCCTCTTCCTCTTCTTCCTCAAAACTGTCTTCAAAGCCCTCGCTGTCTTCCTGGTCCTCATCACCTTCTATTGC------TGTATCCCACTGAGGATGATTTTCTGGCACTGGTTTTGCTTCATGAACTTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1205 s fr1.chrUn 159061421 136 + 349519338 AGTCATTGTCCTCGTCGTCGTCTTC------------ACTCTCCTCGATGCCGTCGCTGTCCTCCTGCTCCTCGTCCTCCTCCTCCGTGTCGGGGATGTCCCACTGAGGGTGATTGTCCAGCATAGCCTTGGCTTCGTGGACCTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1206 s danRer1.chr8 26343964 145 - 36410523 AATGATTTTAGTCGTTGTCTTCTTCGTCTTCCTCAGA---CTCCTCAATGCCGTCACTGTCCTCCTGGTCATCCTCCTCTTCCTCAGTTTCTGGGATGTCCCACTGCGGGTGGTTATCCATCATGGCCTTCGCCTCATGAACCTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1207
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1208 a score=78207.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1209 s hg17.chr6 108594662 25 + 170975699 ATGAGCAAGCCAGCCGGATCAACAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1210 s panTro1.chr5 110895281 25 + 175429504 ATGAGCAAGCCAGCCGGATCAACAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1211 s mm5.chr10 88143690 25 - 130633972 ATGAGCAAGCCCGCCGGATCAACAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1212 s rn3.chr20 8761429 25 - 55296979 ATGAGCAAGCCCGCCGGATCAACAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1213 s canFam1.chr12 68179741 25 + 75455811 ATGAGCAAGCCGGCCGGATCAACAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1214 s fr1.chrUn 210130082 25 + 349519338 ATGAGCAAAGCCGCCGGCTCAACAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1215 s danRer1.chr20 17232749 25 + 31913010 ATGAGCAAGCCTGCTGGTTCAACAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1216
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1217 a score=89508.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1218 s hg17.chr6 108640045 50 + 170975699 TCAGGCATGTCTTATTTTAGATGGAGTATAGCTTTTATCTATTATTTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1219 s panTro1.chr5 110940096 50 + 175429504 TCAGGCATGTCTTATTTTAGATGGAGTATAGCTTTTATCTATTATTTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1220 s mm5.chr10 88191839 50 - 130633972 TCAGGCATGTCTTATTTTAGATGGAGTATAGCTTTTATCTATAATTTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1221 s rn3.chr20 52647276 50 - 55296979 TCAGGCATGTCTTAGTTTAGATGGAGTATAGCTTTTATCTATGATTTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1222 s canFam1.chr12 68222804 50 + 75455811 TCAGGCATGTCTTATTTTAGATGGTGTATAGCTTTTATCTATAATTTCGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1223 s galGal2.chr3 42753356 50 - 108638738 TCAAGTATGTCTTATTTTGGATGGTGTGTAGTTTTTGTCTATTACTTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1224 s fr1.chrUn 210136674 50 + 349519338 TCAGGCTTGTCTGATCTTAGAGGGGGTGTAGTTCTTGTCCAAGACCTTGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1225 s danRer1.chr20 17245947 50 + 31913010 TTAGGCTTGTCTAATTTTGGAAGGGGTGTAGTTTTTATCCACAGACTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1226
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1227 a score=92653.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1228 s hg17.chr6 108640095 56 + 170975699 CTTGTAAAAACATGTGAAGACAACG-TTCGTTCTGTGCCAGAGGATGACCAGCGACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1229 s panTro1.chr5 110940146 56 + 175429504 CTTGTAAAAACATGTGAAGACAACG-TTCGTTCTGTGCCAGAGGATGACCAGCGACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1230 s mm5.chr10 88191889 56 - 130633972 CCTGTAAAAACATGTGAAGACAACG-TTCATTCTGGGCCAGAGGATGACCAGCGACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1231 s canFam1.chr12 68222854 57 + 75455811 CCTGTAAAAACATGTGAAGACAACGTTTCATTCTGTGCCAGAGGATGACCAGCAACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1232 s galGal2.chr3 42753406 56 - 108638738 CTTGTAAGAACATATGAAGACAGCG-CTCATTCTGTGCCAGTGGGTGGCCTGCAACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1233 s fr1.chrUn 210136724 56 + 349519338 CCTGTAGAAACATGTGCAGGCATCG-CTCGTTCTGGGCGAGAGGATGACCGGCCACT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1234 s danRer1.chr20 17245997 56 + 31913010 CCTGTAGGAACATGTGCAGGCAGCG-CTCATTTTGGGCCAATGGATGACCAGCAACT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1235
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1236 a score=53058.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1237 s hg17.chr6 108722976 139 + 170975699 ATGGCGGCCTCCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAGAGCCCGCTGAGAGGGAGATGTGTTGGGTGCGGGGCCTGGGCCGCCGCTCTCGCTCCTCTGGCCACCGCCCCTGGGAAGCCCTTTTGGAAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1238 s panTro1.chr5 111023287 139 + 175429504 ATGGCGGCCTCCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAGAGCCCGCTGAGAGGGAGATGTGTTGGGTGCGGGGCCTGGGCCGCCGCTCTCGCTCCTCTGGCCACCGCCCCTGGGAAGCCCTTTTGGAAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1239 s mm5.chr10 88248538 139 - 130633972 ATGGCGGCCTCCTGGTCGCCCTTGGTTACTCTGCGCTCCGCCGCGCGCAGCCGGCTGACTGGGAGAGGTGTTGGGTGCGGGGCGCGGGTCGTCGCAATCCCTCCTCCGGCCCCTGGCCCTGGGAAACCCCTGTGGAAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1240 s galGal2.chr3 42777490 100 - 108638738 ATGGCGGCGCCCGTGTCGCCCTTGGTTACT------------GCGTGGTGCCTGCTGCGGGCA--------TCGGCGCGGCGTGTTGTCCGTC--------------TGCTGCCGGCACGGG-----CCCTGCCGAGAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1241
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1242 a score=607969.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1243 s hg17.chr7 113660517 168 + 158628139 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTCTA---AGCAGCCAATTAGATGCTGGCAGCAGAGATGGAAGATCAAG---TGGTGACACCAGCTCTGAAGTAAGCACAGTAGAACTGCTGCATCTGCAACAACAGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1244 s panTro1.chr6 115716623 168 + 161576975 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTCTA---AGCAGCCAATTAGATGCTGGCAGCAGAGATGGAAGATCAAG---TGGTGACACCAGCTCTGAAGTAAGCACAGTAGAACTGCTGCATCTGCAACAACAGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1245 s mm5.chr6 14955268 168 + 149721531 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTTTA---AGCAGCCAATTAGATGCTGGCAGCAGGGATGGGAGATCAAG---TGGTGACACCAGCTCTGAAGTAAGCACAGTGGAGCTGCTGCATCTGCAACAACAGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1246 s rn3.chr4 40844510 168 + 187371129 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTCTA---AGCAGCCAATTAGATGCTGGCAGCAGGGATGGGAGATCAAG---TGGTGACACTAGCTCAGAAGTAAGCACAGTGGAGCTGCTGCATCTGCAACAACAGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1247 s canFam1.chr14 56181068 168 + 63549963 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTCTA---AGCAGCCAATTAGATGCTGGCAGCAGAGATGGAAGATCAAG---TGGTGACACCAGCTCGGAAGTAAGCACAGTAGAACTGCTGCATCTGCAACAACAGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1248 s galGal2.chr1 165171657 168 - 188239860 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCAAAATGGAATGAGCACTCTA---AGCAGCCAATTAGATGCTGGCAGCAGAGATGGAAGATCAAG---TGGTGACACGAGCACTGAAGTAAGCACAGTGGAACTCCTGCATCTGCAACAACAGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1249 s fr1.chrUn 206218864 174 + 349519338 ATGATGCAGGAGTCGGCCACAGAGACAATAAGCAACAGTTCAATGAGTCAAAATGGAATGAGCACCCTAAGCAGCAGCCAATTAGAGGCTGGCAGTAGAGATGGGAGATCAAGCGCTGGTGACACGAGCAGCGAAGTAAGCACAGTCGAGCTGCTGCATCTGCAACAACAGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1250 s danRer1.chrUn 132907084 167 + 367113659 ATGATGCAGGAGTCGGCCAATGAGACAATAAGCAACAGTTCAATGAGTCAAAATGGAATGAGCAGCCTA---AGCAGCCAATTAGATGCTGGCAGTAGAGATGGAAGATCAAG---TGGGGAGACGAGCAGTGAAGTAAGCGCAGTCGAGCTGCTGCATCTGC-ACAACAGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1251
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1252 a score=398171.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1253 s hg17.chr7 116512159 230 + 158628139 TCATGTAGCGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCCTGACAGCGCACGGCGCAGCACCAGTGGAACTTACACCCACACTTGGTCATCCGGGTGACATGGGAGGTGTCGTAGCCTCTCCCACAGCACATGACTTCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1254 s panTro1.chr6 118798885 230 + 161576975 TCATGTAGGGGTTGTCCAGTCAGCGTTCTTGGGGGCCTTGCATGTGTGCACATCCAGAGCTTCCAGGCAGTCCTGACAGCGCACGGCGCAGCACCAGTGGAACTTACACCCACACTTGGTCATCCGGGTGACATGGGAGGTGTCGTAGCCTCTCCCACAGCACATGACTTCACAGCTGTCCATGCCCCGGGAAGTCAGGTTGCACACACGGCCTGCTGTACCCAGGGAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1255 s mm5.chr6 17732295 230 + 149721531 TCATGTAGGCGTCGCCCAGTCGGCACTCTTGGGGGCCTTGCATGTGTGCACGTCCAGGGCCTCCAGGCAGTCCTGACAGCGCACGGCACAGCACCAGTGGAATTTACACTCACACTTGGTCATCCGGGTGACGTGGGATGTGTCATAGCCTCTCCCACAACACATAACTTCGCAGCTGTCCATGCCTCGGGAAGTCAAGTTGCACACACGGCCCGCTGTACCCAGGGAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1256 s rn3.chr4 43819674 230 + 187371129 TCATGTAGGAGTTGTCCAGTCGGCACTCTTGGGGGCCTTGCATGTGTGCACGTCCAGGGCTTCCAGGCAGTCCTGACAGCGCACGGCACAGCACCAGTGGAATTTACACTCACACTTGGTCATCCGGGTGACATGGGATGTGTCATAGCCTCTCCCACAACACATAACTTCGCAGCTGTCCATGCCTCGGGAAGTCAAGTTGCACACACGGCCTGCTGTACCCAGGGAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1257 s canFam1.chr14 58698446 230 + 63549963 TCATGTGGGAGCCGCCCAGTCGGCGCTCGTGGGGGCCTTGCACGTGTGCACGTCTAGGGCCTCCAGGCAGTCCTGACAGCGCACGGCGCAGCACCAGTGGAACTTACACTCGCACTTGGTCATCCGCGTGACGCGGGACGTGTCGTAGCCTCTCCCGCAGCACATGACCTCGCAGCTGTCCATGCCGCGGGAAGTCAGGTTGCACACGCGGCCCGCCGTCCCCGGGGAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1258 s galGal2.chr1 166556534 230 - 188239860 TCATGTCCGGGAGGCCCAGCCCGCAGCCTTGGGCGCCTTGCACGTGTGGATGTCCACCTCCTCCAGGCAGTCCTGGCAGCGCACCGCGCAGCACCAGTGGAACTTGCACTCGCATTTGGTCATCCTGCTGACGCGCAACGTGTCGTAGCCACGGCCGCAGCACATCACCTCACAGCTGTCCATGCCGCGGGACGTCTGGTTGCACACCCGGCCGGCCGTCCCCGGAGAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1259 s fr1.chrUn 117668262 224 - 349519338 --CCGCGGGGGGGGGCCAGGTCACGTC----AGGCCCTTGCAGGTGTGCACGTCCACCTGCTGGTGGCAGTCTCGGCAGAGCACGGCGCAGCACCAGTGGAACTTGCACTCGCACTTGGTGGTGCGGCCGACCCGGGACGTGTCGTAGCCCCGGCCGCAGCACATCACCTCGCAGCCGTCGGTGCCGGGGGACGTCCTGTTGCAGAGGCGCCCGCCGGTCCCCAGCGACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1260 s danRer1.chrUn 193800262 230 - 367113659 TCAAGTCAAATCGAGCCAGTCGGGTTTCTTGTGTAGTTTACAAGTGTGGACGTCCACCGTTTCCTCGCAGTCTCTGCACTCCACAGCGCAGCACCATTTAAACTTGCACTCGCATTTGGTCATGCGGTTTACACGGGTGGTGTCGTACCCGCGGCCGCAGCACATGATCTCACAGCCGTCCATGCCTCTGGAGGACTTGTTGCACACCCGTCCTGACGTACCCAGAGAAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1261
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1262 a score=266204.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1263 s hg17.chr7 116714099 53 + 158628139 ATGCAGAGGTCGCCTCTGGAAAAGGCCAGCGTTGTCTCCAAACTTTTTTTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1264 s panTro1.chr6 119004369 53 + 161576975 ATGCAGAGGTCGCCTCTGGAAAAGGCCAGCGTTGTCTCCAAACTTTTTTTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1265 s mm5.chr6 17978854 53 + 149721531 ATGCAGAAGTCGCCTTTGGAGAAAGCCAGCTTTATCTCCAAACTCTTCTTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1266 s rn3.chr4 44072448 53 + 187371129 ATGCAGAAGTCGCCTCTGGAGAAAGCCAGCTTTATCTCCAAACTCTTCTTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1267 s canFam1.chr14 58860070 53 + 63549963 ATGCAGAGGTCGCCCCTGGAAAAGGCCAGCGTCCTCTCCAAACTTTTCTTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1268
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1269 a score=435383.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1270 s hg17.chr7 116945541 246 + 158628139 CTATTTGTTAGGTTTTTCTAGGTGTTCATTTTT---GTGTAAGTTCCAATTCAC---TTCTTTTGAGTTGTTGTTGATTTCTATTTGCCTTGTATTA---CTGCTGCTGCTGCTTCTTTTGGTGTTCTGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATTCAGTAGTTTGATGGCTGCTGAGAGGACTGACC---TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1271 s panTro1.chr6 119229725 246 + 161576975 CTATTTGTTAGGTTTTTCTAGGTGTTCATTTTT---GTGTAAGTTCCAATTCTC---TTCTTTTGAGTTGTTGTTGATTTCTATTTGCCTTGTATTA---CTGCTGCTGCTGCTTCTTTTGGTGTTCTGGGAACACTGGGTGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTGAAACACCCAACTCAGTCTTTGATTTACTGTTGCTGCATTCAGTAGTTTGATGGCTGCTGAGAGGACTGACC---TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1272 s mm5.chr6 18175809 246 + 149721531 CTATTTGTTTGGTTTTTCTACTTGTTCGTGTTT---GTCTAAGGTCCAATTCTC---TTCTTTGGAGTTGTTGTTGATTTCTAGTTGCCTTGTATTG---CTGCTGCTGCTGTTTCTTTTGGTGTTCTGGGAACACTGAGCGACTTTGCTTCTAGGAACAGGAAGAAAAGATTTAACGCTTGAGACACCCATCTCAGTCTTTGATTTACTGTTGCTGCATTCGGCAGTTTGACGGCTGCTGGGAGGACTGGCT---TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1273 s rn3.chr4 44334350 249 + 187371129 CTATTTGTTACGTTTTTCTACGTGTTCGTGTTT---GTCTACGTTCCAATTCTC---TTCTTTGGAGTTGTTATTGATTTCTAGTTGCCTTGTATTACTGCTGCTGCTGCTGCTTCTTTTGGTGTTCTGGGAACACTGGGCGACTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTTGAGACACCCAACTCAGTCTTGGATTTACTGTTGCTGCATTCGGTAGTTTGATGGCTGCTGAGAGGACTGGCT---TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1274 s canFam1.chr14 59084680 249 + 63549963 CTGTTGGTTTGGTTTTGCGACTTGTTCGTTTTTTTGGTGGAAGTTTCAAATCTC---TTCTTTTGAGTTGTTGTTGATTTCGGTTTGCCTTGTATTA---CTGCTGCTGCTGCTTCTTTTGGTGTTCGGGGAACACTGGGTGGCTTTACTTCTAGGAACAGGAAGAAAAGATTTAACTCTCGAAACACCCAACTCCGTCTTGGATTGCCTGTTGCTGCATTCGGCCGCTTGGTGGCTGCTGAGAGGACTGGGC---TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1275 s galGal2.chr1 166718518 245 - 188239860 TTATT-GTAAAATTTTTCTGTTTGTTCTTTTTTTT-GTGCAAATTCCAAATCTCTCTTTTTTTTGTGTCGTTATCTGCCTCTATTTGCCTTGTATTA---CTGCTGCTGCT--TTTTTTTAGTACTCTGAGAAGGCTGGGTGACTTTACTTCTCGGTACAGGAAGAAAAGATTTAACTCTTGAACCACCCAGCTCTGTCTTTGAT------TTGCTGCTTTCTACAGTTCGACTGCTGCTGAGAGGACGGATTCCATC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1276
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1277 a score=404599.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1278 s hg17.chr8 118881131 186 + 146274826 TC---------AAAGTCGCTCAATGTCTCGGTATTTCTTCCTCAAAATAGAGACCTGGTCTTTAAAGAGGACGGGGTCGAGCCTCATCTGAGAGTGGATCAGCGGCATGTAGCCAAACCAGCTGGCAAACGTATTCATGCAGCTCTGTCGCTGGGCAAAGTGGTCAGGGTCAGCCCAACGGGAAGCCCGAGAAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1279 s panTro1.chr7 121606752 186 + 149542033 TC---------AAAGTCGCTCAATGTCTCGGTATTTCTTCCTCAAAATAGAGACCTGGTCTTTAAAGAGGACGGGGTCGAGCCTCATCTGAGAGTGGATCAGCGGCATGTAGCCAAACCAGCTGGCAAACGTATTCATGCAGCTCTGTCGCTGGGCAAAGTGGTCAGGGTCAGCCCAACGGGAAGCCCGAGAAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1280 s mm5.chr15 53109074 186 + 104138553 TC---------AAAGTCGTTCAATGTCTCTGTATTTCTTCCTCAGAATTGAGACTTGGTCTTTAAAGAGGACCGGGTCCAGCCTCATCTGAGAATGGATCAGCGGCATGTAGCCAAACCAGCTGGCAAATGTATTCATGCAGCTCTGTCGCTGGGCAAAGTGGTCAGGGTCGGCCCAGCGGGATGCTCGGGAAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1281 s rn3.chr7 89414686 186 + 143082968 TC---------AAAGTCGTTCAATGTCTCTGTATTTCTTCCTCAGGATTGAGACTTGGTCTTTAAAGAGGACCGGGTCGAGCCTCATCTGAGAGTGGATCAGCGGCATGTAGCCAAACCAGCTGGCAAACGTATTCATGCAGCTCTGTCGCTGGGCAAAGTGGTCAGGGTCAGCCCAGCGAGATGCTCGGGAAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1282 s canFam1.chr13 20213465 186 + 66159989 TC---------AAAGTCGCTCAATGTCTCGGTATTTCTTCCTCAGAATAGAGACCTGGTCTTTAAAGAGGACAGGGTCGAGCCTCATCTGCGAGTGGATCAGCGGCATGTAGCCAAACCAGCTGGCAAACGTATTCATGCAGCTCTGTCGCTGGGCAAAGTGGTCAGGGTCAGCCCAGCGGGAAGCCCGAGAAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1283 s galGal2.chr2 14208956 186 - 147590765 TC---------AGAGTCGTTCAATGTCTCGGTATTTCTTCCTCAGGATGGAGACCTGGTCTTTAAAGAGGACAGGGTCGAGCCTCATCTGAGAGTGGATCAGCGGCATATAGCCAAACCAGCTGGCAAAAGTGTTCATGCAGCTCTGCCGTTGGGCGAAGTGGTCGGGGTCGGCCCAGCGTGAGGCCCGGGATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1284 s fr1.chrUn 293823575 195 - 349519338 TCTGGATGGTTATAGCCTCTCTATGTCCCTGTACTTCTTCCTCAGTATGGACACCTGGTCTTTGAAAAGGACCGGGTCCAGCCTCATCTGTGAGTGGACCAGGGGCATGCTGCCAAACCAGCTGGCAAACTTGTTCATGCAGGTCTGACGCTGGGCAAAGTGGTCCGGGTCGGCCCAGCGAGACGCTCGGGAGCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1285 s danRer1.chrNA 25951001 186 + 390413307 TC---------AGAGTCGCTCGATGTCTCTGTACTTCTTGCGCAGTATTGATACCTGGTCCCTGAACAGAACAGGATCCAGTCTCATTTGCGAATGGACCAGGGGCATTGTGCCAAACCAGCTGGCAAATTTGTTCATGCACGTCTGCCTCTGGGCAAAATGGTCAGGGTCGGCCCAACGTGATGCACGGGACGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1286
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1287 a score=116382.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1288 s hg17.chr9 128764156 33 + 138429268 ATGGCCTGCCTGAGCCCCTCGCAGCTCCAGAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1289 s panTro1.chr11 113605485 33 + 123086034 ATGGCCTGCCTGAGCCCCTCGCAGCTCCAGAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1290 s mm5.chr2 30226931 33 + 181686250 ATGGCCTGCCTGAGTCCCTCACAACTCAAGAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1291 s rn3.chr3 9310853 33 + 170969371 ATGGCCTGCCTGAGTCCCTCACAACTCAAGAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1292 s canFam1.chr9 6350671 33 - 53642819 ATGGCCTGCCTGAGCCCCTCGCAGCTCCAGAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1293
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1294 a score=-3882.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1295 s hg17.chr9 128787519 1 + 138429268 C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1296 s mm5.chr2 30244450 0 + 181686250 -
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1297 s rn3.chr3 9330108 0 + 170969371 -
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1298 s canFam1.chr9 6365310 0 - 53642819 -
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1299 s fr1.chrUn 290357729 0 - 349519338 -
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1300
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1301 a score=2555.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1302 s hg17.chr9 128787520 5 + 138429268 TAGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1303 s mm5.chr2 30244450 5 + 181686250 TAGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1304 s rn3.chr3 9330108 5 + 170969371 TAGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1305 s canFam1.chr9 6365310 5 - 53642819 TATGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1306 s galGal2.chr17 5207254 5 - 10632206 TAAAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1307 s fr1.chrUn 290357729 5 - 349519338 CAAAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1308
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1309 a score=71382.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1310 s hg17.chr9 128787525 62 + 138429268 CATCAGCAATATCAGGAGGTAGAGAGGCAGAAGGAGATTGTCTATCTGTGTAGTGTATGCTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1311 s mm5.chr2 30244455 62 + 181686250 CATCAGCAATATCAGTAGGTAGAGAGGCAACAGGAGATTGTCTATCTGAGTAGTGTACGCTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1312 s rn3.chr3 9330113 62 + 170969371 CATCAGCAAAATCAGTAGGTAGAGGGGCAACAGGAGATTGTCTATCTGAGTTGTGTATGCTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1313 s canFam1.chr9 6365315 62 - 53642819 CATCAGCAATATCAGGAGGTAGAGAGGCAACAGGAGATTGTCTATCTGTGTCGTGTATGCTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1314 s galGal2.chr17 5207259 62 - 10632206 CATAAACATGATCTGGAGGTAGAGAGGTAACAGCAAATTATCAATTTGGGTTGTGTAAGCTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1315 s fr1.chrUn 290357734 62 - 349519338 CAACAGCAGGATAAAGAGGTAAAGTGGGAGGAGGAGGTTGTCTATTTGGAAGGTGTAAGCTT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1316 s danRer1.chr21 12648417 62 - 13488766 CAGCAGGAGGATGTAGAGATACAGAGGAAGCAGAAGGTTGTCAATCTGCGACGTATAGGCCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1317
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1318 a score=2211540.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1319 s hg17.chr9 128787587 1515 + 138429268 CCAGGAGGGACA---CAGTGCTGATGGACCCCAAA--ATCCAAGCATAACTGTAGTTTAGGTCCACTCCACTGTCAAAGATTAAGATCAGAGCTACAGAAATGATCTGCGCAAATATAGATGTCATGGTCCCCTCAAAAGTCTTTTTGGTTCCAGGCCAGCGGATCTCCCCCATGGTGCTACCGAAGATGGAGGCCACAGTATCACCCACACCCACAGCCAGGACACCGGCATAGGGGACGAGGGCCCTGGCTCCTCCCAGGCTACCCTTCTGTGTGCAGGGTCTGGGGATCAGCCAGATGGGAAGAGACATGCCCAGGAGCAGGTAGATGTGTGTCAGAATGAGTGGTCCACTGTCTCGTTCATCCAGAAAAAGGGACAGGAAGCTCCGTAGAGTGTGACCCAAAGGCTTGATGCGGAAGTAGCGCACATACTCCAGGAAGATGAAGACCGCCAGGCATACAGTGGCGGCTACATAGAGCAGTGGCCGGTCAAAGATGATACCTGGGATGTAGGTGGCTACCACAATGAGGTGGAAATACTTTCGGGCGATGGTGGGGGCCTGGTGCTTCTTGGACTCGGAAGATGACCGCTTGGCATTCTGGTACAGCACCACCAGGCAGGCCAAGGTGGCCAGCAGAGACCAATAGGCTAGGAGGTAGATGCGGGTGTCTGTCTGGAAGAGAAACTGAAGAAGCCAGAGCAGGGGATTCCTGCGGATGAGCCGGTGCAGCCAGGGTAGGACCACACCAAGGCTCAGCACACAGGTCATGAGGTGGAAGAAGATGGAGGAGGCCCAGGTGCCTGAGTCCATGAAGACAAACAGAGTGCTGAAGAAAATGCCCATGAGTACCATCCCTACTACCACCACCAGCAGGAAGAAGTCCACTGGGTC---CCCCTGACTTTCCACCAGTGTCAGAGAGCGCTTGATGAGCTGGTTGAGGACAAAGCTAATGCCACCCAATACCAGCAGTGCCTCACCAGGGGTGAAGCAGCGGGGCAGCAGGTACAGCAGGATCATGTTGAGATAAACGAAGATCAGAAGGACTTCCAGGACTTCGATCACCTCCCCCACGCTCAACGAGTGCTTCATGATATAAATGATAACACCTCCAGCCAAGCCCAAGATGACACAAGTGTTGGTTGGCACTGGGCGAGTGATGCCGAGCGCCAACACTGATGAGAAGAGGGCCACTGCCATGCCAGTGGCTGCCACCACAATGCCAAAACGCTCAAAGAACGGGTTCCCAGCAGTCTGGCACCGCTCCTTCATGACTAGTCCAAGCAAAGGCATGACCATGGAGGCGGGCAATAGGCCACTGTTTGCGGACATTCGGAACTGGAAGACGGCGCTTCCCTGCTGTAGCAGCCGGTCCCACTTGTATTGGACGTAGAAGGCCTGCACTGCGAGGGCCACGGCGCACCACGAGTATCGGTCCCATACGGTTGCGTGGATGCTCAGCACCACTGCAAACACTACTGCCGCCTCTGCCAGCACCGATCCACTCAGCGGAGCCCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1320 s panTro1.chr11_random 46298820 1517 - 53199993 CCAGGAGGGGCATGCC--TGCAGATGGACTCTAGAGGATCCAAGCATAACTGTAGTTTAGGTCCACTCCACTGTCAAAGATTAAGATCAGAGCTACAGAAATGATCTGCGCAAATATAGATGTCATGGTCCCCTCAAAAGTCTTTTTGGTTCCAGGCCAGCGGATCTCCCCCATGGTGCTACCGAAGATGGAGGCCACAGTATCACCCACACCCACAGCCAGGACACCGGCATAGGGGACGAGGGCCCTGGCTCCTCCCAGGCTACCCTTCTGTGTGCAGGGTCTGGGGATCAGCCAGATGGGAAGAGACATGCCCAGGAGCAGGTAGATGTGTGTCAGAATGAGTGGTCCACTGTCTCGTTCATCCAGAAAAAGGGACAGGAAGCTCCGTAGAGTGTGACCCAAGGGCTTGATGCGGAAGTAGCGCACATACTCCAGGAAGATGAAGACCGCCAGGCATACAGTGGCGGCTACATAGAGCAGTGGCCGGTCAAAGATGATACCTGGGATGTAGGTGGCTACCACAATGAGGTGGAAATACTTTCGGGCGATGGTGGGGGCCTGGTGCTTCTTGGACTCGGAAGATGACCGCTTGGCATTCTGGTACAGCACCACCAGGCAGGCCAAGGTGGCCAGCAGAGACCAATAGGCTAGGAGGTAGATGCGGGTGTCTGTCTGGAAGAGAAACTGAAGAAGCCAGAGCAGGGGATTCCTGCGGATGAGCCGGTGCAGCCAGGGTAGGACCACACCAAGGCTCAGCACACAGGTCATGAGGTGGAAGAAGATGGAGGAGGCCCAGGTGCCTGAGTCCATGAAGACGAACAGAGTGCTGAAGAAGATGCCCATGAGTACCATCCCTACTACCACCACCAGCAGGAAGAAGTCCACTGGGTC---CCCCTGACTTTCCACCAGTGTCAGAGAGCGCTTGATGAGCTGGTTGAGGACAAAGCTAATGCCACCCAATACCAGCAGTGCCTCGCCAGGGGTGAAGCAACGGGGCAGCAGGTACAGCAGGATCATGTTGAGATAAACGAAGATCAGAATGCCTTCCAGGACTTCGATCACCTCCCCCACGCTC-CCTAGAGCTTCATGATATAAATGATAACACCTCCAGCCAAGCCCAAGATGACACAAGTGTTGGTTGGCACTGGGCGAGTGATGCCGAGCGCCAACACTGATGAGAAGAGGGCCACTGCCATGCCAGTGGCTGCCACCACAATGCCAAAACGCTCAAAGAACGGGTTCCCAGCAGTCTGGCACCGCTCCTTCATGACTAGTCCAAGCAAAGGCATGACCATGGAGGCGGGCAATAGGCCACTGTTTGCGGACATTCGGAACTGGAAGACGGCGCTTCCCTGCTGTAGCAGCCGGTCCCACTTGTATTGGACGTAGAAGGCCTGCACTGCGAGGGCCACGGCGCACCACGAGTATCGGTCCCATACGGTTGCGTGGATGCTCAGCACCACTGCAAACACTACTGCCGCCTCTGCCAGCACCGATCCACTCAGCGGAGCCCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1321 s mm5.chr2 30244517 1509 + 181686250 CCAGAAGGGATA---CAGTGCTGATGGACCCCAAA--ATCCAGGCATAACTGTAGTTCAGGTCTACTCCACTGTCAAAGATTAAGATTAGAGCTACAGAGATGATTTGTGCAAATATAGATGTCATAGTCCCCTCGAAGGTTTTCTTAGTTCCAGGCCAGCGGATCTCTCCCATGGTGCTGCCAAATATGGAGGCCACAGTATCACCCACACCCACAGCCAAGACCCCAGCATAGGGGACCAGGGCTCTTGCTCCTTCCAGGCTGTCCTTCTGTGTACAGGGTCTGGGGATCAGCCAAATAGGAAGAGACATGCCCAGAAGCAGGTAGATGTGTGTTAGGATAAGGGGTCCACTGTCTCGTTCATCCAGGAAGAGGGACAGAAGGCTTCGCAGAGTGTGACCCAAGGGCTTTATTCGGAAATAGCGCACATACTCCAGGAAGATGAAGACTGCCAGGCACACAGTGGCGGCCACATACAGCAGTGGCCGGTCAAAGATGATGCCCGGGATATAAGTGGCTACCACAATGAAGTGGAAATACTTTCTTGTAATGGTAGGCGCCCTGTGCTTCTTGGACTCAGAAGACGACCGCTTAGCATTCTGGTACAGCACCACCAGGCAGGCCACAGAGGCCAGCAAAGACCAATAGGCAAGGAGGTAGATGCGAGTTTCAGTGTAGAAGAGGAACTGAAGAAGCCAAAGCAGGGGGTTCCTACGAATGAGCCAGTGCAGCCAGGGCAGAACCACACCAAGGCCCAGCACACAGGTCATGAGGTGGAAGAAGATGGAAGAGGCCCAGGTGCCTGAATCCATGAAGACAAAGAGGGTGCTGAAAAAGACACCCATGAGCACCATCCCTACCACCACCACCAACAGGAAGAAGTCCACTGGGTC---CCCCTGGCTTTCA------GTCAGAGAGCGCTTGATGAGTTGGTTAAGGACGAAGCTAATGCCACCCAATACCAGCAGTGCCTCCCCAGGAGTGAAGCATCGGGGCAGCAGGTACAGCAGGATCATGTTGAGATAAACAAATATTAGCAGGACTTCCAGGACCTCGATCACCTCGCCTACACTGAGCGAGTGCCTCATAATATAAATGATAACGCCTCCAGCCAAACCAGAGATGGCACAAGTATTGGTGGGCACCGGGCGAGTAATGCCCAGTGCCAACACGGAGGAGAAGAGGGCCACTGCCATGCCAGTAGCTGCAACCACAATGCCGAAGCGCTCGAAGTATGGGTTCCCTGCAGTCTGGCAGCGCTCCTTCATGACTAGCCCAAGCAAAGGCATGACCATGGAGGCCGGCAGTAAGCCGCTGTTCGCGGACATCCGGAACTGGAAAACGGCATTGCCCTGCTGGAGCAGCCGGTCCCACTTGTACTGGACGTAGAAGGCCTGCACCGCGAGGGCCACCGCGCACCAGGAGTATCGGTCCCACACTGCAGCGTGGATGCTCAACACCACGGCGAACACCACTGCAGCCTCCGCCAGCACCGACCCGCTCAGCGCAGCCCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1322 s rn3.chr3 9330175 1509 + 170969371 CCAGAAGCGACA---CAGTGCTGATGGACCCCAAA--ATCCAAGCATAGCTGTAGTTCAGGTCTACTCCACTGTCAAAGATTAGGATCAGAGCCACAGAGATGATTTGTGCAAATATAGATGTCATAGTTCCCTCGAATGTTTTCTTAGTTCCAGGCCAGCGGATCTCCCCCATGGTGCTGCCAAATATGGAGGCCACAGTATCGCCCACACCCACAGCCAGGACCCCAGCATAGGGGACCAGGGCTCTTGCTCCTCCGAGGCTGCCCTTCTGTGCACAGGGTCTGGGGATCAGCCAAATGGGAAGAGACATGCCCAGAAGCAGGTAGATGTGCGTCAGGATGAGGGGCCCGCTGTCCCGTTCATCCAGGAAGAGGGACAGAAGGCTGCGCAGAGTGTGACCCAGGGGCTTGATTCTGAAATAGCGCACATACTCCAGGAAGATGAAGACGGCCAGACACACGGTGGCGGCCACATACAGCAGTGGCCGGTCAAAGATGATACCGGGGATGTAAGTGGCCACCACAATGAAGTGGAAATACTTTCTGGTAATGGTAGGAGCCTTGTGCTTCTTGGACTCAGAAGATGACCGCTTGGCATTCTGGTACAGCACCACCAGGCAGGCCATGGTGGCCAGCAAGGACCAATAGGCTAGGAGGTAGATGCGAGTTTCTGTGTAGAAGAGGAACTGAAGAAGCCAGAGCAGGGGGTTCCTACGAATGAGCCAGTGCAGCCAGGGCAGAACCACACCAAGGCCCAGCACACAGGTCATGAGGTGGAAGAAGATAGAAGAGGCCCAGGTGCCCGAATCCATGAAGACAAAGAGGGTGCTGAAAAAGACACCCATGAGCACCATCCCCACCACCACCACCAACAGGAAGAAGTCCACTGGGTC---CCCCTGGCTTTCA------GTCAGAGAGCGCTTGATGAGCTGGTTGAGGACGAAGCTAATGCCACCCAATACCAGCAGTGCCTCCCCAGGAGTGAAGCAGCGGGGCAGCAGGTACAGCAGGATCATGTTGAGATAAACGAATATTAGCAGGACTTCCAGGACCTCGATCACCTCGCCCACACTGAGCGAGTGCTTCATAATATAAATGATAATACCTCCGGCCAAACCCGAGATGGCACAAGTATTGGTGGGCACCGGGCGAGTAATGCCCAGTGCCAACACCGAGGAGAAGAGGGCCACTGCCATGCCAGTGGCTGCAACCACAATGCCGAAGCGCTCGAAGTATGGGTTCCCTGCAGTCAGGCAGCGCTCCTTCATGACCAGCCCAAGCAAAGGCATGACCATGGAGGCCGGTAGTAAGCCACTGTTCGCGGACATTCGGAACTGGAAAACAGCATTCCCCTGCTGGAGCAGCCGGTCCCACTTGTACTGGACGTAGAAGGCCTGCACTGCTAAGGCCACGGCGCACCAGGAGTATCGGTCCCACACTGCAGCGTGGATGCTCAGCACCACTGCGAACACCACTGCAGCCTCCGCCAGCACTGACCCGCTCAGCGCAAACCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1323 s canFam1.chr9 6365377 1515 - 53642819 CTAGGAGGGACA---CGATGCTGATAGAGCCCAAA--ATCCAAACATAACTGTAGTTTAGGTCCACTCCACTATCAAAGATTAAGATCAGAGCTACAGAAATGATCTGGGCAAATATAGAGGTCATGGTCCCCTCAAAGGTCTTTTTGGTTCCAGGCCAGTGGATTTCCCCCATTGTGCTGCCAAAAATGGAGGCCACAGTGTCCCCCACACCCACAGACAGGACTCCTGCATAAGGGACTAGGGCTCTTGCTCCCCCCAAGTTGCCCTTCTGTGTGCAGGGCCTGGGAACCAGCCAAATTGGAAGAGACATGCCCAAGAGCAGGTAGATATGTGTCAGGATGAGTGGTCCACTGTCTCGTTCATCTAAGAAAAGGGACAGGAGGCTCCTCAGAGTGTGGCCCAGGGGCTTGATGCGGAAATAGCGCACATATTCTAGGAAGATAAAGACTGTTAGGCATATGGTGGCAGCTACATAGAGCAGTGTCCGGTCAAGGATGATACCGGGGATGTAGGTGGCCACCACAATGAAGTGGAAATACTTTCGGGCAATGGTGGGGGCCTGGTGCTTCTTAGACTCAGAAGATGACCGCTTGGCATTCTGGTAAAGCACCACCAGGCAGGCTAAGGTGGCCAGCAGAGACCAGTAGACCAGGAGGTAGATGCGGGTCTCTTTCTGGAAGAGGAATTGAAGAAGCCAGAGCAGGGGGTTCTTGCGGATAAGCCGGTGCAGCCAGGGAAGGACCACGCCAAGGCCCAGCACACAAGTCATAAGGTGGAAGAAGATGGAGGAAGCCCAGGTACCTGAGTCCATGAAGACAAAGAGTGTGCTGAAGAAGACGCCCATAAGCACCATCCCTACTACCACCACCAGCAGGAAGAAATCCACTGGGTC---GCCCTGGCTCTCCACCACAGTCAGAGAACGCTTGATGAGCTGGTTGAGCATGAAGCTGATGCCACCTAATACAAGCAGTGCCTCCCCAGGGGTAAAGCAGCGGGGCAGCAGGTACAGCAGGATCATGTTGAGGTAGACGAAGATCAGCAGGACCTCCAGGACCTCGATCACCTCGCCCACACTCAGTGAGTGCTTCATGATATAAATGATGACACCTCCAGCCAAGCCTGAGATGACACAAGTGTTGGTGGGCACTGGGCGAGTGATGCCCAGTGCCAGTACCGACGAGAAGAGGGCCACTGCCATCCCAGTGGCTGCCACCACAATTCCAAAGCGCTCAAAATATGGGTTCCCCATGGACTGGCAGCGCTCCTTCATGACCAGTCCGAACAAAGGCATGACCATTGATGCGGGCAGCAGGCCACTGTTTGCGGACATGCGGAACTGGAAGACAGCGCTTCCCTGCTGCAGCAGCCGGTCCCACTTGTACTGGACGTAGAAGGCCTGCACTGCGAGAGCCACGGCGCACCACGAGTATCGGTCCCACACGGCTGCGTGGATGCTCAGCACCACTGCGAACACTACTGCTGCCTCCGCCAGCACTGACCCACTCAGCGGAGCCCCGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1324 s galGal2.chr17 5207321 1512 - 10632206 CCAAAAGAGAAA---CTAAGCTCACAGACACCAGA--ATCCAGGCATAGCTGGAGTTCAGGTTCACGCTGCTGTCAAAGATCAGAATAAGAGCCACAGCAATGATCTGAGCAAAAATTGCTGTCATTGTCCCTTCAAAGGTCTTCTTTGTGCCCGGCCATTTGATTTCCCCCATGGTACTGCCAAAAACAGAGGCCATGGTGTCTCCTACCCCTACTGCAAGCACCCCAGCATAGGGCACCAGTGCTCCTGCCCCAGACAAGGCACCTTTAGGGGCACAGGATCTGGGGAACAACCACACTGGGAGGGACATGCCAAGAAGAAGATAAATGTGAGTCAAGATTAGAGGCCCACTGTCTCTTTCATCCAAGAAGAGAGACAGCAAATAGCGAAGAGTTTGGCCAAACGGTTTGATCCTGAAGTACCGAATGTACTCTAAGAATATGAACACTGCCAGACACAGGACTGCAGCAACATGGAGAAGCTGGCGGTCATAAATTAGTCCAGGAACATAAGTTGCTACAACAATGAAATGGAAATACTTCCTGGTTATGGTTGAGGCCTGGTGTTTTTTAGATTCG---GACGATCTCTTGGCATTCTGGTAGAAAACTATGCCACACGCTGAAGCAGCCAATAAAGTCCAATATATGAGAAGGTAAACCCTCGTCTGTGTCTGAAACAGAAACTGGAGCAGCCAAAACAAAGGGTTCCTCCGGATCAGTCGGTAAAGCCAAGGCATGATGACCCCTAAGCCTAGCACTGCTGTCATCATGTGGAAAAACATGGAGGAGATCCACGTACCCGAATCCATGAAAATGAAGAGAACAGTGAAAAAAAGCCCAAGGATAACAACTCCAATAACTGCCACCAGAAGGAAGAAGTCTATGGGTTC---ACCTCTGCCCTCGATTACATTCAGTGAGCGTTTAATGAGCTGATTGAGAACAAAACTTATACCTCCGAGAACTAGCAATGCTTCTCCAGGAGTAAAACACCGAGGCAGCAGGTAGAGCAAGATCATACTGAGGTAGACAAAAATTAGCAGCACTTCTAGGACCTCTATCACTTCTGAAACAGTCAAAGAGTGCTTCATGGTATAGATAATTATACTGCCAGCAACACCACTGAGTATGCAGGTGTTGGTGGGCACAGGTTTTGTGATGCCAACAGCAATTACAGACAAAAATAGAGCAACCAACATGCCAGTGGAAGCTACAACTATGCCAAAGCGTTCAAAGTACACGATACCAGCAGCCTTGCACCTCTCCTTCATTGCTATCCCCAGCAAGGGGATGACCATGCTGGCAGGCAGGAGCCCACTGTTCGCTGTGGTGCGGAACTGGAACACAGCCCCCCCCTGCTGCAGCAGGCGGTCCCATTTAAACTGGACATAGAAAGCCTGGATGGCAAGAGCTACAGCACACCAGGAGTAGCGGTCCCACACCACTGCATGCACGCACAGAACGATGCTGAAGACGATCAGGGATTCCACCAGCACTGGTTTGTTTAACATGGTTCCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1325 s fr1.chrUn 290357796 1512 - 349519338 CTAGCATTGCCA---CCAGAGTGATAGAACCAACA--ATCCAGGAGTAGCTGGAGTTCAGATTGATGCCAGTATCAAAGATTAGAAAGATGGCCACAGCAATAATCTGTGCAAACACAGATGTTGCAGTCCCCTCAATGGTTTTCTTAGTACCGGGCCAACGAATCTCTCCCATGGTGCTGCCAAACACAGATGCCACAGTATCTCCTACCCCGACAGCCAGGACACCTGCATATGGTATCAGCCCACCGGCACCAGGAAGTATTCCTTTTGGGGCACATGGTCCAGGGAACAGCCATATGGGAAGAGACATGCCCAAAAGGAGGTAAATGTGGGTCAGGATAAGAGGCCCAGAGTCCCGCTCATCCAGGAACAATGTAAGAACCTGTCTGAGCACCTGACCCAGTGGCCTGATCCGAAAGTAGCGCACGTACTCCAGGAACAAAAAGACTGCCAAGCAGCCAACAGAGGCCACATGGAGCAGGTGCCGGTCGTATATGAGACCTGGAACATAGGTGGCCACCACAATTAGATGGAAGTACTTCCGGACTACAGTCGAGGCTTGGTGTTTCTTGGACCCA---GACTGACGTTGATAGTTCTGGTGTAACACAACACAGGTGGCCAGGACCACCAGAAACACCCAGTATGCCAGCAGAGAGAGCCTTCTGTCAGTGAATGTGACAAAGTCCAGTAGCCACATGATGGGATGCCTGCCGATGAACAGGGATAGCCATGGCAACAGAATTCCCAGACTGAGAACGGCTGTCATGATGTGGAAAAAAACAGATGACACCCAGGTCTCTGATTCCATGAAGCAAAACAGCAGAGCAAAGAACACGCCCAGCAACAACGAGCCTACTACCACGACCGGCAGGAAATAATTTATTGGATC---GCCTTTGACCTCTGTCAAGTTCAGTGAGCGCTTGATAAGCTGGTTGACAATGAAACTGATTCCACCGATGATGAGAAGGGCTTCTCCGGGTGTGAAGCAGCGAGGCAGCAGGAAAAGCACGATCAGGCTGAGATAGACGAAGATCAACAACACCTCTAAGACTTCGATGACCTCAGACACCGTTAACGTCTGTTTCGTCATGTACAGAATTGCACTGGCGGCCATGCCTGCAATCACACAAGTGTTGGTGGGTACAGGTCTTGTAATGCCTAAGGCGATCAGGGAGAGGAACAGTGCCAGCATCATGCCGGTGATGGTGATGACCATGGAGAAGCGCTCGAGGTAAACGTTCCCTGATTCAGAGCACCTTAGTCTCAGCACCAAGCCCAGCAAAGGCATCACCATGGAGGCTGGGACGATGCCACTGTTTGCTGCTGGACGGAACTGGAACACGGCACCCCCCGACTTGAGCAAACGATCCCATTTGTGCTGAACGTAGAAAGCCTGGATGAAGAGTGCAATGCTGCACCAGGAATGCTGGTTCCACAGCACCATGTGGACCCACCCCACAATGGCAAAAACTATAGCGGACTCTACAAAGACTGGATTAATCTCCATTGCCACTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1326 s danRer1.chr21 12648479 1515 - 13488766 CCAACATGGCCA---CCATAGAGATGGATCCCACC--ACCCACGAGTAGCTGGCGTTCAGGTTAATACTGCTGTCGGCGATGAGGAAAACCACCACAGCGATAATCTGAGCGAACACAGAGGACGCCGTGCCCTCAAATGTCTTCTTAGTCCCAGGCCAGCGGATTTCACCCACGTTGCTGCCGAAAACGGATGCCACTGTGTCCCCGACCCCTACAGCAAGGACTCCAGCATAGGGTACTAGCCCACTAGCGCCCCCTAGGCCTCCTTTTGGGGTGCACATCCCAGGTGTCAACCACAGTGGAAGAGAAACGCCAAGAAGAAGATAAATATGAGTGAGAATAAGTGGTCCTGAATCTCTCTCATCAAGGAATAAGGTGAGAAGACGTCGAAGCGGAGCCCCGAATGGTCGAATGCGAAAATAGCGGACATATTCGAGAAACAAAAATGCAGAGAGGCAAACAACCGCAGACAAATGCAGCAAAGGACGATCCAGAGCGAGTCCGGGAGCGAAGGTTAAAACGGTGAGCAGGTGGAAATACTTCCGCACTGTCGTTGATGCTTGATGCTTCTTGCTGCCTGCAGAT---CGATGACTATTTTGATGCATCACAACGGCAACTGCTAGAAGCGCCAAAGCGGCCCAAAACCCAATGAGCCAAAGTCGAGTGTTTGATTCAGTGATGAAATGCATCAACCAAGTGATTGGATGGTGCTGCGTGAGTAGAGATAGCCAAGGAACCAATAACCCCAATCCCAAAACCGCAGTCATGGTATGGAAGAAGAGCGACGCTGACCAGGTTTCAGATTCCATGAATATAAAAAGCACGGCGAAGAATATTCCCAACAGCACTAACCCTAAAACAGCTACCGGGAGGAAATACGGAAGCGGGTCTGAGTTTGCATTTCCAGACGAAGCCAGAGAGCGCTTAATTAGCTGGTTGATGATAAAACTAATCCCGCCAAGGATCAGAAGGGCTTCGCCGGGGGTGAAGCAACGTGGAAGGAGGTACAGCAGGATTAAACTTAGATACACAAAAATCAGAAGCACCTCCAAGACTTCGATGACCTCAGACACTGTTAGTGTTTGCTTCACGGTGTACAGAATAGCACTACTAGCAATTCCGGCGATAACACAAGTGTTTGTTGGCACCGGCCGCGTGATTCCCAATGCGATGAGCGAGAGGAATAGAGCCAACATCATTCCGATTACTGTGATGACCATTGCGAATCGCTCCATGTAGACGTTTCCCACAGCGAGGCAGCGGCCTCGTAGGGTGAGTCCCAGTAGTGGCAGCACCATACTGGCTGGCAGGACGCCGCTGTTGGCTGAAGGACGAAACTGGAAGACGGCGGCACCAGAGCGAATCAGACGATCCCATTTGTGCTGCACATAAAAAGCCTGGACGGCCAATGCCATGCAGCACCAGGACAGCTGATTCCACACGGCCATGTGTACGGAAACCACCATGGCGAACACCACCGCAGATTCAACCAGCACTGGATCCATCTGCATGACTGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1327
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1328 a score=491.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1329 s hg17.chr9 128789102 2 + 138429268 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1330 s panTro1.chr11_random 46300337 2 - 53199993 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1331 s mm5.chr2 30246026 2 + 181686250 AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1332 s rn3.chr3 9331684 2 + 170969371 AC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1333 s canFam1.chr9 6366892 2 - 53642819 GG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1334 s galGal2.chr17 5208833 2 - 10632206 TC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1335 s fr1.chrUn 290359308 2 - 349519338 GC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1336
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1337 a score=-383.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1338 s hg17.chr9 128789104 1 + 138429268 C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1339 s panTro1.chr11_random 46300339 1 - 53199993 C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1340 s mm5.chr2 30246028 1 + 181686250 T
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1341 s rn3.chr3 9331686 1 + 170969371 T
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1342 s canFam1.chr9 6366894 1 - 53642819 A
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1343 s galGal2.chr17 5208835 1 - 10632206 C
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1344
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1345 a score=46199.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1346 s hg17.chr9 128789105 31 + 138429268 CCGGGGCCGGAGATGGGCACTCTCGGGTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1347 s panTro1.chr11_random 46300340 31 - 53199993 CCGGGGCCGGAGATGGGCACTCTCGGGTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1348 s mm5.chr2 30246029 25 + 181686250 CCTGG------GGAGGGCACTGTCGGGTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1349 s rn3.chr3 9331687 31 + 170969371 CCGGGGCTTGGGGAGGGCACTGTCGGGTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1350 s canFam1.chr9 6366895 25 - 53642819 CCGGG------GGAGCGTGCTCTCGGGTCAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1351
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1352 a score=145262.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1353 s hg17.chr9 128882427 96 + 138429268 ATGGCGTTCCGGAGGGCCGAGGGCACGTCTATGATCCAGGCCCTGGCCATGACGGTGGCCGAGATCCCCGTGTTCCTGTACACGACGTTTGGGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1354 s panTro1.chr11_random 46393737 96 - 53199993 ATGGCGTTCCGGAGGGCTGAGGGCACGTCTATGATCCAGGCCCTGGCCATGACGGTGGCCGAGATCCCCGTGTTCCTGTACACGACGTTTGGGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1355 s mm5.chr2 30327714 96 + 181686250 ATGGCATTCCGGAGGACTGAGGGTATGTCCATGATCCAGGCTCTGGCCATGACTGTGGCTGAGATTCCAGTGTTCCTGTACACAACTTTTGGTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1356 s rn3.chr3 9412966 96 + 170969371 ATGGCATTCCGTAGGACTGAGGGTATGTCCATGATCCAGGCTCTGGCCATGACTGTGGCTGAGATACCAGTGTTCCTGTACACGACTTTTGGTCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1357 s canFam1.chr9 6452102 96 - 53642819 ATGGCATTCCGGAGGACTGAGGGCATGTCCATGATCCAGGCACTGGCCATGACGGTGGCCGAGATCCCTGTGTTCCTGTATACAACGTTTGGGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1358 s fr1.chrUn 120365676 96 + 349519338 ATGTCACTCAGACAAGCGGAAGGGATGTCCATTGCCCAGGCTTTGGCAATGACGGTAGCAGAGATCCCAGTGTTCCTTTATTCCACGTTTGGACAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1359 s danRer1.chrNA 88880074 96 + 390413307 ATGTCATTCAGAAGTGCAGAGGGCGTGTCCATCATGCAGGCCTTGGCCATGACTGTGGCTGAGATACCTGTGTTTCTCTATTCCACCTTTGGGCAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1360
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1361 a score=359580.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1362 s hg17.chr9 128937229 216 + 138429268 TCAGAGCTTGGCCCGG---GGGTGGCTCTGCAGCAGGGCACGCATGTCCAGGAGCGCCTTCTCCAGGTAATGCGCCAGGCGGGCGGCGTTGGTCTCCGCGCAGCTGTTGTAGGCCGACAGGGAGAAGTTGATGTGGGCCTCCATGGGGTTATAGCAGACACCGTAGCCGTCGGGGACCACGGGCCCGAAGAACATGACACAGTCTGTCTTGGCAGGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1363 s panTro1.chr11 113780157 216 + 123086034 TCAGAGCTTGGCCCGG---GGGTGGCTCTGCAGCAGGGCACGCATGTCCAGGAGCGCCTTCTCCAGGTAATGCGCCAGGCGGGCGGCGTTGGTCTCTGCGCAGCTGTTGTAGGCCGACAGGGAGAAGTTGATGTGGGCCTCCATGGGGTTATAGCAGACACCGTAGCCGTCGGGGACCACGGGCCCGAAGAACATGACACAGTCTGTCTTGGCAGGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1364 s mm5.chr2 30362600 216 + 181686250 TCAGAGCTTGGCCCTG---GGGTGGTTCTGGAGTAGGGTGCGCATGTCCAGCAGAGCTTTCTCCAAGTAGTGAGCCATGCGGGCAGCGTTGGTCTCAGCACAGCTGTTGTAGGCTGACACGGAGAAGTTGATATGGGCCTCCATGGGGTTGTAGCAGATGCCATAACCATCTGGGACCACAGGTCCGAAGAACATGACACAGTCTGTCTTGGCAGGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1365 s rn3.chr3 9448511 216 + 170969371 TCAGAGCTTGGCCCTG---GGGTGGTTCTGGAGTAAGGTGCGCATGTCCAGCAGAGCTTTCTCCAAGTAGTGAGCCATGCGGGCAGCGTTGGTCTCAGCACAGCTGTTGTAGGCTGACACGGAAAAGTTGATATGGGCCTCCATGGGATTGTAGCAGATGCCGTAACCGTCTGGGACCACAGGTCCGAAGGACATGACACAGTCTGTCTTGGCAGGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1366 s canFam1.chr9 6500360 216 - 53642819 TCACAGCTTGGCCCGA---GGGTGACTCTGCAGCAGAGCGCGCATGTCCAGGAGTGCCTTCTCCAGGTAGTGCGCCAGGCGGGCTGCATTGGTCTCGGCACAGCTGTTGTAGGCTGACACAGAGAAGTTGATGTGCGTCTCCATGGGGTTGTAGCACACGCCATAGCCGTCTGGGACCACGGGCCCAAAGAACATGACGCAATCTGTCTTGGCAGGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1367 s galGal2.chr17 5301443 216 - 10632206 TTACAGTTTGGATTTG---GGGGTAGATTGGAGCAAGCTTCTCATGTCTAGCAGTGCTTTCTCAAGATAATGTGCCATGCGAGCTGCATTTGTGTCAGCACAGCTGTTGAATGCTGAAATGGCAAAGTTGATGTGTTCATCCATAGGGTTGTAACAGATTCCATAGCCATCTGGAACCACGGGACCAAAACACATCACACAGTCTGTCTTTGCTGGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1368 s fr1.chrUn 47430687 219 + 349519338 TCACTGCTGGGCCGTGGCTGCGGCATCTTCCAGGAGAGCTCTCATGTCCAACAGGGCGCCCTCTACAGCCTGGGCGAAGCGAGCGGCGTTGGTCTCCTCACAGCTGTTGAAGGCCGTGATGGCCACGTTGATGTGCTCCTCCATGGGATTGTAACACACGCCGTAACCGTCTGGCACCATCGGACCAAAGCACATCACGCAGTCTGTCTTCGAGCCGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1369 s danRer1.chr8 1065541 216 - 36410523 TTAAAGCTTGGCTCTG---GGTGTCTGCTCCAGCAGGGTCCTCATGTCCAGCAGAGCGTCCTCCAGACCCTGAGCCAGACGGACAGCATTTGTGTCCTGGCAGCTGTTGAACGCAGATACTGCAAAGTTAATGTGGGTATCCATGGGATTGTAGCATACGCCATAACCATCAGGCACCACCGGCCCAAAGCACATCACACAGTCAGTTTTAGCTGGCAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1370
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1371 a score=134850.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1372 s hg17.chrX 122745047 138 + 154824264 ATGACTTTTAACAGTTTTGAAGGATCTAAAAC----TTGTGTACCTGCAGACATCAATAAGGAAGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACTTTTGCTAATTTTCCAAGTGGTAGTCCTGTTTCAGCATCAACA-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1373 s panTro1.chrX 126858618 138 + 160174553 ATGACTTTTAACAGTTTTGAAGGATCTAAAAC----TTGTGTACCTGCAGACATCAATAAGGAAGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACTTTTGCTAATTTTCCAAGTGGTAGTCCTGTTTCAGCATCAACA-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1374 s mm5.chrX 34442683 138 + 160634946 ATGACTTTTAACAGTTTTGAAGGAACTAGAAC----TTTTGTACTTGCAGACACCAATAAGGATGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACATTTGCTAACTTCCCAAGTAGTAGTCCTGTTTCAGCATCAACA-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1375 s rn3.chrX 157748736 138 - 160775580 ATGACTTTTAACAGTTTTGAAGGATCTAGAAC----TGTTGTACCTGCAGACACCAATAAGGATGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACATTTGCTAACTTCCCAAGCAGCAGTCCTGTTTCAGCATCAACA-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1376 s canFam1.chrX 98422419 138 + 126913094 ATGACTTTTAACAGTTTTGAAGGAGCTAAAAC----TTGTGTACCTGCAGGCATCAATAAGGATGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACTTTTGCTAATTTTCCAAGTAGCAGTCCTGTTTCAGCATCAACG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1377 s galGal2.chr4 75226910 138 - 90634903 ATGACGTGTAATGGCCCAGATAGCTCTGAATC----TGGTGCCACTCCAGCCACTGACGGTGACCAGGAGTGGACACAGGAACACTACCGACTAGGAACCTTTGTGGAGTTTCCCCATGATTGTCCAGTTTCAGCATCAGCG-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1378 s danRer1.chr14 14605069 142 - 34612130 TTTAGTTACTACAAATATGGCACACTCAACTCATAATGGCGAATTGGAATCTGACAATGTGGCAGCTGATTGGTCAGTCATGAAGAATCGGGTGAACTCTTTTCAACGTTTTCCATATTCTGAAGACATTTCAGCA-CAGCGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1379
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1380 a score=158991.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1381 s hg17.chrX 122745185 115 + 154824264 CTGGCACGAGCAGGGTTTCTTTATACTGGTGAAGGAGATACCGTGCGGTGCTTTAGTTGTCATGCAGCTGTAGATAGATGGCAATATGGAGACTCAGCAGTTGGAAGACACAGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1382 s panTro1.chrX 126858756 115 + 160174553 CTGGCACGAGCAGGGTTTCTTTATACTGGTGAAGGAGATACCGTGCGGTGCTTTAGTTGTCATGCAGCTGTAGATAGATGGCAATATGGAGACTCAGCAGTTGGAAGACACAGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1383 s mm5.chrX 34442821 115 + 160634946 TTGGCGCGAGCTGGGTTTCTTTATACCGGTGAAGGAGACACCGTGCAATGTTTCAGTTGTCATGCGGCAATAGATAGATGGCAGTATGGAGACTCAGCTGTTGGAAGACACAGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1384 s rn3.chrX 157748874 115 - 160775580 TTGGCGCGAGCGGGGTTTCTCTACACTGGTGAAGGAGACACCGTGCAGTGTTTCAGTTGTCACGCGGCAGTAGATAGATGGCAGTATGGAGACTCAGCTGTTGGAAGACACAGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1385 s canFam1.chrX 98422557 115 + 126913094 TTAGCACGAGCTGGTTTTCTGTATACTGGTGAAGGAGATACTGTGCGGTGCTTTAGTTGTCATGCATCAATAGATAGATGGCAATATGGAGACTCAGCAGTTGGAAGACACAGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1386 s galGal2.chr4 75227048 115 - 90634903 CTAGCTCGAGCTGGCTTTGTTTATACTGGAGAAGGTGATAAAGTCAAGTGCTTCAGTTGCCATGTAACTGTTGAAGGATGGGAGCCTGGGGATTCTGCAATTGACAGACACAAAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1387 s fr1.chrUn 143073633 115 - 349519338 CTGGCCCGGGCCGGCTGGTTCTACACGGGGGTGGGCGACCGCGTGCAGTGTTTCAAGTGCAACGTGACAGCCGAGGGCTGGCAGGCTGGAGACTGTCCCACCGAAAAACACAGGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1388 s danRer1.chr14 14605211 115 - 34612130 CTGGCCCGAGCGGGCTTTTACTTCACAGGCGAGGGGGACAGGGTGCAATGTTTCAGCTGCAGTGCCACTGTGCAGAACTGGAACAGAGGTGACACCCCATTGGAGAGACATCAAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1389
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1390 a score=509291.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1391 s hg17.chrX 122745300 448 + 154824264 AAGTATCCCCAAATTGCAGATTTATCAACGGCT---TTTATCTTGAAAATAGTGCCACGCAGTCTACAAATTCTGGTATCCAGAATGGTCAGTACAAAGTTGAAAACTATCTGGGAAGCAGAGAT---------CATTTTGCCTTAGACAGGCCATCTGAGACACATGCAGACTATCTTTTGAGAACTGGGCAGGTTGTAGATATATCAGACACCATATACCCGAGGAACCCTGCCATGTATAGTGAAGAAGCTAGATTAAAGTCCTTTCAGAACTGGCCAGACTATGCTCACCTAACCCCAAGAGAGTTAGCAAGTGCTGGACTCTACTACACAGGTATTGGTGACCAAGTGCAGTGCTTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCTTGTGATCGTGCCTGGTCAGAACACAGGCGACACTTTCCTAATTGCTTCTTTGTTTTGGGCCGGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1392 s panTro1.chrX 126858871 448 + 160174553 AAGTATCCCCAAATTGCAGATTTATCAACGGCT---TTTATCTAGAAAATAGTGCCACGCAGTCTACAAATTCTGGTATCCAGAATGGTCAGTACAAAGTTGAAAACTATCTGGGAAGCAGAAAT---------CATTTTGCCTTAGACAGGCCATCTGAGACACATGCAGACTATCTTTTGAGAACTGGGCAGGTTGTAGATATATCAGACACCATATACCCGAGGAACCCTGCCATGTATAGTGAAGAAGCTAGATTAAAGTCCTTTCAGAACTGGCCAGACTATGCTCACCTAACCCCAAGAGAGTTAGCAAGTGCTGGACTCTACTACACAGGTATTGGTGACCAAGTGCAGTGCTTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCTTGTGATCGTGCCTGGTCAGAACACAGGCGACACTTTCCTAATTGCTTCTTTGTTTTGGGCCGGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1393 s mm5.chrX 34442936 448 + 160634946 GAATATCCCCAAATTGCAGATTTATCAATGGTT---TTTATTTTGAAAATGGTGCTGCACAGTCTACAAATCCTGGTATCCAAAATGGCCAGTACAAATCTGAAAACTGTGTGGGAAATAGAAAT---------CCTTTTGCCCCTGACAGGCCACCTGAGACTCATGCTGATTATCTCTTGAGAACTGGACAGGTTGTAGATATTTCAGACACCATATACCCGAGGAACCCTGCCATGTGTAGTGAAGAAGCCAGATTGAAGTCATTTCAGAACTGGCCGGACTATGCTCATTTAACCCCCAGAGAGTTAGCTAGTGCTGGCCTCTACTACACAGGGGCTGATGATCAAGTGCAATGCTTTTGTTGTGGGGGAAAACTGAAAAATTGGGAACCCTGTGATCGTGCCTGGTCAGAACACAGGAGACACTTTCCCAATTGCTTTTTTGTTTTGGGCCGGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1394 s rn3.chrX 157748989 448 - 160775580 GAATATCCCCAAATTGCAGATTTATCAATGGTT---TTTATTTTGAAAACGGTGCCACACAGTCTACATCTCCTGGCATCCAAAATGGCCAGTACAAATCTGAAAACTGTGTGGGAAACAGAAAT---------CATTTTGCTCTTGACAGGCCGTCGGAGACTCATGCAGATTATCTCCTGAGAACTGGACAGGTTGTAGATATTTCAGATACCATATACCCGAGGAACCCGGCCATGTGTAGTGAAGAAGCCAGACTGAAGACGTTTCAGAACTGGCCAGACTATGCCCATTTAAGCCCCAGAGAGTTAGCTAGTGCTGGACTCTACTACACGGGGATTGATGATCAAGTGCAATGCTTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCCTGTGACCGTGCCTGGTCAGAGCACAGGAGACACTTTCCCAACTGCTTCTTCGTTTTGGGCCGGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1395 s canFam1.chrX 98422672 448 + 126913094 AAGTATCCCCAAATTGCAGATTTATCAATGGCT---TTTATTTTGAAAACACTGCTGCACAACCTACAAATCCAGGTATCCAAAATGGTCAATATAATGCAGAAAACTATCTGAGAAACAGAGAT---------CATTTTGTTTTAGACAGACCATCTGAGACTCATGCAGATTATCTTTTGAGAACTGGACAGGTCGTAGATATATCAGACACCACATACCCGGAGAACCCTGCCATGTATAGTGAAGAAGCTAGATTAAACTCATTTCAGAACTGGCCAGACTATGTCCACTTGACCCCAAGAGAGTTAGCTAGTGCTGGATTCTACTACACAGGTATTGACGATCAAGTGCAGTGCTTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCGTGTGATAATGCATGGTCAGAACACAGGCGACACTTTCCTAATTGCTTCTTTGTTCTGGGCCGGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1396 s galGal2.chr4 75227163 442 - 90634903 ACCTTTCCCCAGATTGCAGATTTATTACTGGGTCTGCTTTTTTGGAAAATAACG------------TACATCCTCTTGTGCAGAGCCACCAGCATAGAACTGAAAAT------GGCTCCAGCAATTTGGCCCTCCCCTCTGCTCTGGAGGACTTGTCTGATGTGGAGGCAGATTACCTGTTGAGAACCAGGCAGGTTGTGGACATGTCCGATACTTTGTATCCTAAAAACCCTGCTATGTGCAGTGAAGAAGCCAGGCTGAAGTCCTTTCACAATTGGCCCCCCTATGGCCTATTGACGCCAAAGGAATTAGCTAGTGCAGGACTCTACTATACAGGTGTTGGTGATCAAGTTGCATGTTTCTGTTGCGGTGGAAAACTGAAAAACTGGGAACCTGGTGATCGAGCTTGGTCTGAGCACAAGAGGCATTTTCCCAAATGCTTTTTTGTCCTGGGTCGGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1397 s fr1.chrUn 74286897 397 + 349519338 AGGTTTCTCCATTTTGCAAATTTCTCAGTTGTA---TTTATC---GAACCAGTTCCAATC------CGATTCCTGGCA-CCTCACTGACGA--ACGGCTCTGCCTACAATG-AAGAAGCAGAAGA---------TAT--------------------------------GGAATATCGTCTGAGAACAGGACAGGTGGTCGAT------GAGTCCATTTATCCAGTGGTCCCTCATATGAGGAGTGAAGAAAGCCGGCTTCACACCTTTTCTACGTGGCCCTTGACTGCACCAGTGAGCCCGTGCGATCTGGCCCAAGCTGGCCTTTACTACTTAGGGCAGTGTGACCAGGTTCAGTGTTTCTGCTGTGGTGGCACACTGGCTGACTGGGAAATCGGGGATTCCGCCTGGGCAGAACACAGCAAACATTTCCCTTTCTGCTTTTTCATCCTGGGGCACGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1398 s danRer1.chr14 14605326 382 - 34612130 TGGCATCTCCGGACTGCAGGTTCCTCAGCTGTG---CTCATGGTATGAGAAACT------------CTAATTCG---ATCCAGAGTCCTGATTACGATG-------------AAGAGGCCGAGAA---------TAG--------------------------------AGAGTTCCTCCTCCGCACGGGAGAGGTGGTGGAC------GAGTCCATGTATCCTGTTGTACCGCACATGAAGAGTGAAGAAGCGCGACTGAGTACTTTCAACAACTGGCCAGCAGACTCTCCAGTTCGGCCTGAAGACCTGGCAGAAGCAGGGATGTATTACATTGGGATAGACGACAATGTGCAGTGCTTCTGTTGCGGAGGGGGTCTGAGTGGATGGGAGCAAGGCGACGATCCTTGGAGTGAACATGCGAAGTACTACTCAAACTGCTTCTTCTTCTTGGGCCACAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1399
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1400 a score=18792.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1401 s hg17.chrX 122745748 22 + 154824264 TCTT---AATATTCGAAGTGAATCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1402 s panTro1.chrX 126859319 22 + 160174553 TCTT---AATATTCGAAGTGAATCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1403 s mm5.chrX 34443384 22 + 160634946 CGTT---AATGTTCGAAGTGAATCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1404 s rn3.chrX 157749437 22 - 160775580 TGTT---AATGTTCGAAGTGAGTCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1405 s canFam1.chrX 98423120 22 + 126913094 TGTT---AATATTCGAAGTGAATCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1406 s galGal2.chr4 75227605 25 - 90634903 CGTTGGAAATGTTTCAACTGATTCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1407 s fr1.chrUn 74287294 16 + 349519338 TGTTGGCAATAT---------ACCT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1408
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1409 a score=0.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1410 s hg17.chrX 122745748 27 + 154824264 TCTTAATATTCGAAGTGAATCTGATGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1411
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1412 a score=-3673.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1413 s hg17.chrX 122745770 5 + 154824264 GATGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1414 s panTro1.chrX 126859341 5 + 160174553 GATGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1415 s mm5.chrX 34443406 2 + 160634946 GG---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1416 s rn3.chrX 157749459 2 - 160775580 GG---
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1417 s canFam1.chrX 98423142 5 + 126913094 GATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1418 s galGal2.chr4 75227630 5 - 90634903 ATCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1419
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1420 a score=43762.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1421 s hg17.chrX 122745775 54 + 154824264 TGTGAGTTCTGATAGGAATTTCCCAAATTCAACAAAT--CTTCCAAGAA-----ATCCATC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1422 s panTro1.chrX 126859346 54 + 160174553 TGTGAGTTCTGATAGGAATTTCCCAAATTCAACAAAT--CTTCCAAGAA-----ATCCATC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1423 s mm5.chrX 34443408 54 + 160634946 TGTGAGTTCTGATAGGAATTTCCCAAATTCAACAAAC--TCTCCAAGAA-----ATCCAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1424 s rn3.chrX 157749461 54 - 160775580 TGTGAGTTCAGATAGGAATTTCCCAAATTCAACAAAT--TCTCCAAGAA-----ATCCAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1425 s canFam1.chrX 98423147 54 + 126913094 TGCGAGTACTGATAGGAACGTCCCAAATTCAACAAGT--ATTCCAGAAA-----ATCCAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1426 s galGal2.chr4 75227635 54 - 90634903 TGCTGAGCTTGGGAGAAGCTGTCTAAA--CAACGAACAGCATCCAAGGA-----ATCCATC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1427 s danRer1.chr14 14605708 50 - 34612130 TGTGGGC---------AACGTCCCCCTGACAACACCT--AGGCCAAGGGCTAATGTCCACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1428
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1429 a score=105732.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1430 s hg17.chrX 122745829 95 + 154824264 CATGGCAGATTATGAAGCACGGATCTTTACTTTTG-GGACATGGATATACTCAGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1431 s panTro1.chrX 126859400 95 + 160174553 CATGGCAGATTATGAAGCACGGATCTTTACTTTTG-GGACATGGATATACTCAGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1432 s mm5.chrX 34443462 95 + 160634946 CATGGCAGAATATGAAGCACGGATCGTTACTTTTG-GAACATGGACATCCTCAGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1433 s rn3.chrX 157749515 95 - 160775580 CATGGCAGAATATGACGCACGGATCGTTACTTTTG-GAACATGGCTATACTCAGTTAACAAGGAGCAGCTTGCAAGAGCTGGATTTTATGCTTTAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1434 s canFam1.chrX 98423201 95 + 126913094 CATGGCAGATTATGAAGCACGGATCGTTACTTTTC-GGATGTGGATGTGTTCAATTAACAAGGAGCAACTTGCAAGAGCTGGATTTTATTCTTTAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1435 s galGal2.chr4 75227689 95 - 90634903 CATGGCAGAATATGAGAGGCGGATACAAACATTTT-TAGCTTGGATATACCCTGTTAACAAGGAACATCTTGCTGAAGCAGGGTTCTACAGCACAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1436 s fr1.chrUn 74287369 95 + 349519338 CATGGGGACATTTGAGGAAAGGCTGAGGAGTTTTGCTGGTGTCAAC-CACCCTCTAAACATAGAGAGGCTTGCGAGAGCTGGCTTCTACAGCAATG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1437 s danRer1.chr14 14605759 95 - 34612130 TACAGACACTTTTGAGGGGCGTCTTGATAGCTTCA-AAGGCAGACAGCATCCCATTGACCCTGAGAGATTGGCCAGAGCTGGTTTCTACAGCACAG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1438
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1439 a score=-8579.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1440 s hg17.chrX 152648964 14 + 154824264 CTATTCTAGGGCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1441 s panTro1.chrX 157964696 14 + 160174553 CTATTCTAGGGCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1442 s mm5.chrX 65413418 14 + 160634946 CTATTCTAGGGCTA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1443 s rn3.chrX 159861438 14 + 160775580 CTATTCTAGGGCTA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1444 s canFam1.chrX 124765428 14 + 126913094 CTACTCTAGGGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1445 s galGal2.chr26 3679526 14 - 4255270 CTACGCTAATGAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1446 s fr1.chrUn 230132755 14 - 349519338 TTAGACGAATGAGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1447 s danRer1.chr10 12185566 12 + 25436222 -TGGGCGGAGGCA-
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1448
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1449 a score=283274.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1450 s hg17.chrX 152648978 218 + 154824264 CGGCAGGGTTGATGGGGGAAGTGGCCCCTGAGCTGT-CATTGCCCCCTGCCGCCTCCTTCTCCTTCTTGCCACTGTACTGGCCAATGAACGAACCATCCTCGTTGAACTGAACATCCA---CGCTGCCCCCATAATCGGCCAGGCTGTCGTCACTGCCCAGGGGCTTGATGTCCCCGTTGAGCGATGGCTGGCT-GCTGCCAAAGGCCTTCTCCTCGTTGTCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1451 s panTro1.chrX 157964710 218 + 160174553 CGGCAGGGTTGATGGGGGAGGTGGCCCCTGAGCTGT-CATTGCCCCCTGCCGCCTCCTTCTCCTTCTTGCCACTGTACTGGCCAATGAACGAACCATCCTCGTTGAACTGAACATCCA---CGCTGCCCCCATAATCGGCCAGGCTGTCGTCACTGCCCAGGGGCTTGATGTCCCCGTTGAGCGATGGCTGGCT-GCTGCCAAAGGCCTTCTCCTCGTTGTCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1452 s mm5.chrX 65413432 218 + 160634946 CTGCAGGATTGATAGGAGAGGTAGCCCCTGAACTGT-CATTGCCTCCTGCTGCCTCCTTCTCTTTCTTGCCACTGTACTGGCCGATGAAAGAGCCATCCTCATTGAACTGGACGTCCA---CACTGCCCCCATAATCAGCCAGGCTGTCATCACTGCCTAGGGGTTTGATGTCTCCGTTGAGAGATGGCTGGCT-GCTGCCAAAGGCCTTCTCTTCATTGTCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1453 s rn3.chrX 159861452 218 + 160775580 CTGCAGGATTGATAGGAGAGGTAGCCCCTGAGCTGT-CATTGCCTCCCGCTGCCTCCTTCTCTTTTTTGCCACTGTATTGGCCGATGAAAGAGCCATCCTCATTGAACTGGACATCCA---CACTGCCCCCATAATCAGCCAGACTGTCATCACTGCCTAGGGGTTTGATGTCTCCATTGAGAGATGGCTGGCT-GCTGCCGAAGGCCTTCTCTTCATTGTCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1454 s canFam1.chrX 124765442 218 + 126913094 CGGCAGGGTTGATGGGGGAGGCGGCCCCTGAGCTGT-CGTTGCCGCCTGCTGCCTCCTTCTCCTTCTTGCCGCTGTACTGGCCGATGAAGGAGCCGTCCTCGTTGAACTGCACGTCCA---CGCTGCCCCCGTAGTCGGCCAGGCTGTCGTCACTGCCCAGGGGCTTGATGTCCCCATTGAGGGACGGCTGGCT-GCTGCCAAAGGCCTTCTCCTCGTTGTCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1455 s galGal2.chr26 3679540 218 - 4255270 AGATAGCATTGACTGGGGACGTGGCTTCTGAGCTCT-CGTTGCCTTCCGTTTCCTCCTTGTCCTTTTTCACTGTGTACTGGCCAATGAAGGAGCCGTCCTCGTTGAACTGCCCTTCCC---CACCCTCTCCGTAGTCCACCAAGCTGTCGTCACTCTCCTGTTGCTTTATCGTGCCATCCAGGGAGGTCTGACT-GTTGGGCAGTGGTTTGTTGTCTTCATCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1456 s fr1.chrUn 329627114 209 - 349519338 CGGCAGGGTTGAGGGGGGAGTTGTCCGGTACGCCGTGGAACGGCTCCGGCC-------CCTCGCTGTGGCGGCTGAACTGGCTGGCCAGGGACTCGTCCATGTTGAGCTCCGTGGTTACGGCGCTGCTGCCGTTGAAGTCCAGGTTGTCCTCGCTGCACA---GCTTGCTGTCCTCGCCCAGCGAAGGCTGGCTGGCTGT----GCGCTTCTCTTCGAGGTCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1457 s danRer1.chr10 12185578 200 + 25436222 TGTTGGGGTTGACCGGCGACACGGCGCCAGAGCTGT-CGTGCCCGCGTG---------GATCCCTTCGACCGCTGTACTGCCCGATGAAGGAGCCGTCCTCATTGAACTGGATGTCCA---CGCTGTCCCCGTAATCCGCCAGACTGTCGTTGCTGCT---GCGCTTGCTCTCGCACCC---CGACGGCTGGCT-GATGG---AGCACTTCTCCATATCACTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1458
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1459 a score=102002.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1460 s hg17.chrX 152691446 25 + 154824264 ATGCTCATGGCGTCCACCACTTCCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1461 s mm5.chrX 65450627 25 + 160634946 ATGATCCTGGTGTCTACCACGTCTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1462 s rn3.chrX 159897295 25 + 160775580 ATGCTCCTGGTGTCTACCGTGTCCG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1463 s canFam1.chrX 124808548 25 + 126913094 ATGCTCCTGGCATCCACCACCTCGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1464
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1465 a score=45779.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1466 s hg17.chrX 152694029 80 + 154824264 TCAGTGTG---GCTTGGGGGTCGTGTCTAGGCCCTGGGGGTGGGAAGCTGAGGGTGAGGCTGGGGCCCCAGGGCCCCGGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1467 s panTro1.chrX 158011192 80 + 160174553 TCAGTGTG---GCTTGGGGGTCGTGTCTAGGCCCTGGGGGTGGGAAGCTGAGGGTGAGGCTGGGGCCCCAGGGCCCCGGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1468 s mm5.chrX 65453119 80 + 160634946 TCAGACTG---GCTTGCGAGTTGAATCTGGACCCTGGGGATGGGAGGTTGAGGGGGAAATTGGAGCCCCAGGTCCCCGGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1469 s rn3.chrX 159899770 80 + 160775580 TCAGACTG---GCTTGCGAGTTGAATCTGGACCCTGGGGATGGGAAACTGAGGGGGAAACTGGAGCCCCAGGTCCCCGGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1470 s canFam1.chrX 124811065 77 + 126913094 TCAGT------GCTTAAGTGGAGAGTCCAGGCCCTGGGGATGGGACGCCGAGGGGGACGCCGGGGCCCCGGAGCCGCGGGAGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1471 s galGal2.chr26 3294210 66 - 4255270 TCAGGGCG---GCT--------------GCGCCATGGAACTGAAATGCACACCGTGCCCTGGCACCCCCATCACCCCTGGGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1472 s danRer1.chrNA 128898465 70 + 390413307 CCAGACTGCAAGCACAGGGAGAGTGTCTGGCCCCCAGGGC-----AGCT--------CGCTGGGGCCAGAGAGCCTCTGGTGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1473
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1474 a score=18883.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1475 s hg17.chrX 152694109 35 + 154824264 AGCCTTTGTTCCTGCCCAGGCGGCTGCTGGGCGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1476 s panTro1.chrX 158011272 35 + 160174553 AGCCTTTGTTCCTGCCCAGGCGGCTGCTGGGCGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1477 s mm5.chrX 65453199 35 + 160634946 AGACTTTGTTTTTGCTGATGCTGCTGCAGGCCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1478 s rn3.chrX 159899850 35 + 160775580 AGACTTTGTTTTTGCTGAAGCTGCTGCAGGCCAGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1479 s canFam1.chrX 124811142 35 + 126913094 AGCCTTTGCTCCTACCCAGGCGGCCGGAGGCCGGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1480 s galGal2.chr26 3294276 30 - 4255270 CATC----CCCCTGTCAGCACTGCT-CGGGGCGGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1481
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1482 a score=7409.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1483 s hg17.chrX 152694144 26 + 154824264 GCCTTTGGGCTTCGGGGCCCAGGACT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1484 s panTro1.chrX 158011307 26 + 160174553 GCCTTTGGGCTTCGGGGCCCAGGACT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1485 s mm5.chrX 65453234 20 + 160634946 GGCGTCAGAGTT------CCTAGACT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1486 s rn3.chrX 159899885 26 + 160775580 GGCTTCAGGTTTCGAGTTCCTAGACT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1487 s canFam1.chrX 124811177 26 + 126913094 GGCTTCAGGCTGCAgggcccggggcc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1488 s galGal2.chrUn 50576950 22 + 165033910 -GTTCTGAG---CGAGGAACAGCACC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1489
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1490 a score=24632.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1491 s hg17.chrX 152694170 31 + 154824264 GGGAGAGGTGGTAGATGCTGGCCCAAGGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1492 s panTro1.chrX 158011333 31 + 160174553 GGGAGAGGTGGTAGATGCTGGCCCAAGGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1493 s mm5.chrX 65453254 31 + 160634946 CGGGGAGGCTGTAGATGCTAACCCATGGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1494 s rn3.chrX 159899911 31 + 160775580 GGGGGAGGCTGTAGATGCTAGCCCATGGCCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1495 s canFam1.chrX 124811203 31 + 126913094 gggggagccggtggacgcgggccccgcgccc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1496 s galGal2.chrUn 50576972 31 + 165033910 GGGAGAGGCGGCAGCGGCTGCCCCCGAGCTC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1497 s fr1.chrUn 329777075 24 - 349519338 GGACGAGGAGGTGGAGGAAGGATC-------
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1498
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1499 a score=47489.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1500 s hg17.chrX 152694201 49 + 154824264 TGGCGGACAGAGGTCTTTCCCAAGAGCTCCTTAAACACAGAGTCCATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1501 s panTro1.chrX 158011364 49 + 160174553 TGGCGGACAGAGGTCTTTCCCAAGAGCTCCTTAAACACAGAGTCCATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1502 s mm5.chrX 65453285 49 + 160634946 TGGCGGACAGCAGTCTTTCCCAAGAGCTCCTTAAACACAGAATTCATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1503 s rn3.chrX 159899942 49 + 160775580 TGGCGGACAGCAGCCTTTCCCAAGAGCTCCTTAAACACAGAATCCATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1504 s canFam1.chrX 124811234 49 + 126913094 tggcgggcggAGGTCTTTCCCAGGAGCTCCTTAAACACGGAATCCATGG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1505 s fr1.chrUn 329777109 37 - 349519338 TGGCGTGTG------------AGGAGCTCCTTAAAAACAGAGTCCATGT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1506
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1507 a score=175616.0
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1508 s hg17.chrX 152694250 13 + 154824264 TCTGTGCCACAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1509 s panTro1.chrX 158011413 13 + 160174553 TCTGTGCCACAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1510 s mm5.chrX 65453334 13 + 160634946 TCTGTGCCACAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1511 s rn3.chrX 159899991 13 + 160775580 TCTGCGCCACAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1512 s canFam1.chrX 124811283 13 + 126913094 TCTGTGCCACAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1513