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annotate rnaseq/cutadapt/test-data/axt_to_fasta.dat @ 11:a712b378e090

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cutadapt added
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 16:33:42 +0100
parents
children
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11
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1 >hg17.chrX_3022175_3023241
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
2 tcttcatgtgacttgcttgtgccttttaggacctgctcaagcctgatcacatatgtacaacttccagttgataatggattgttgctgtgcacaagctactttttagcttcattggttagataatactcagctcatgagatgcaggtcagattacatggcaatttggtagctcattgtcaaatgtttagtttctactgagacctaatatcaggccaagaactgtcactcaaatagagaatcgctatctgcaaaaatcatttgtccaaagtacctagggtttc----atctgtaatacatgtgtaggggcctgctaaatgctccaagcagcatccccatctgccactgtcacctc---atgtgcc--------------------------tagtcatagaaaaacatgcacagcagcctggacctgttaaagaaacttctcctatttctgtacccacacaaagctagcttctcttcaagtcacttggtatatggTATGCTTACCTTAATCTGTTGTGTGAGCCATTTATTAttattttcccattttctgactgtataatttggatattatacttataagttggcagaTATATG---------CATCAGAACATGGAATATGTTGGAAGAATCAAAAGGAGAGTTAGAAGGGGGCAATAGGAAGATGAACATAAACAGGGTACGTACAGA---------------AAATTTTTCAAAGAATAAATAAAACCATTAAAAAAACAAACAAATATACAATGACCATAAAATATTGCTATACTAAATTATAAAA------CAGAAATATTTATATGTACAAAGAAACAAATTCCAAGCCAGAAATTCAACAGGGAATATACAGCATAATAAGATATATATCAATTAGAAAAA-TATCAAATTAAAATTATAAGCTAGAAAGTATTAAAGGGAAAAAATGGATGAATTTAATAGCTTA-------TGCTTAAGAATAATTGGCAAATCAGAAGCCTTGTAAGAAACAATAGAAATAAAGTTT-AAGAGGAATAGAAGAGAAAAATAATAATGCTGAAGGCAGAGGTCAGCATAACAGGAGTGTGAATTGGAATCTCAGACTCACAGGGAAGGTAGAAAGAAGCAGAAGATATTTAAACAAataaa
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
3 >panTro1.chrX_132722807_132723933
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
4 tcttcatgtgacttgcttgtgccttttaggacctgctcaggcctgatgacacacatataacttccagttgataatgcattactgctgtgcacaagctatcttttggcttcattggctagataatactcagctcattaggtgcagttcagatcacatggtaatttggtggctaattgtcaaatgtttattttctactgagccccaatatcagtccaagaactgtcactcaaatagaggattgttgtctgcaaaa-tcatttgtccaaagtccttcgtgtttctttcctctgtaatttatacataggggccttctaaatgctc-aagcagcatccctatctgccactgtcaccaccacaagtgccctccagtctgctggatcataaaatcctagtcatagaacaacatgcacagcagcctggacctgttgaagaactttctccaattcctgtactcacacgaagctagccactccctaagtcacttggtatatgCTATGCATATCTTAATCTGTGGTGTGAACTACCTATTATT----TCCCCGTTTCAGACTGTATAATTGTGATAATATATTTAGAAGTTAGtatatatataatatatatatatCAGAATATGGGATATGCTGAAAGAATCACAAGGAGAGTTAGAAGGAGGCAATAGGAAGATGAACATAAACAGtatatatatatatatacatgtatatataATTTTTTCAAAGAATAAATAAAAATATTGTAAAAG-AAACAAACACACAATG-TCATAAAATATTGCTCTACTATATTATGAAATAGCAACAGCAATATTTGTATGTACAAAGAAATAAATTCCAAGCCAGAAACTCAGCAGAGAATTTACAACATAA---GGCATTTATCAATTGGAAAAAATACTAAATTAAAATTATAAGATAGGAAGTATTCAAAAGAAGCA-TGGATAAATTTAATAGCTCACTAAGAATGCTTAAGAATAATTGGCAAATAAGAGGACCTGCAAGAAATAATAGAAATAAAGTTTTAAGAGGAATAGAAGATAAAAATAAAAATGCCTTAGGCAGAGGTTAGCATAACATGAGTGTGAATTGGAATCTCAGAGTCACAGGAAAAGTAGAAAGAAGCAGAAGATATTTAAAGGAATGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
5
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
6 >hg17.chrX_3025131_3025662
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
7 ggagaaagggaatgggggatga-gagtgggactgggaggagaggagggaggagaggctgtaatcaggatgtaaagtgaataagcaaataaGTTAAGGAAAACAACAACAAAAAGAAACTGGATTAATTTCAATTTATTCAAGAACATTGGTTATTTCCATTAAGTACTGTAGTATTATGTATATGAATATAAAAATCCTTTCATCAAAGCAAGGAAGAGAGCACAAAGCTGCCCTTAAGTCATTGAAGACCTGGAGCACCTATGGGCCTCCCAAGAGGTTCTCACAAAACCTACAACCTCCATCCCAAGAGCCTGTGTCTGACAGAGCTGGTATGAGAAAAGGAGACAATTCTTCCC-----CAGG------------TTTTAGCCAGACTTTGAGTACACAATGGGATAGTGAGGAGCC----------------------CAGTGAAAGCAA------------TTAGTGATTTGGCCTGTGACCCTCTAGCACAATGTTTTGCAGGTCCAGTTGGACATGACATGTTTTCATTGGAAAGGCACATTTATAGTACCTAATGACAGCCCATGTCAA-GTGGCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
8 >panTro1.chrX_132731309_132731841
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
9 ggaggaggaggaggaggaataacaagaagaagaagaagaagaagaagaagaagaag--------aagaagaagaagaagaagaagaagaag--aagaagaagaagaagaagaagaaACAGGATTGATTCAAATTTATTCAGGAATACTAGTTATTTCGAATAAGCCCTATAGAATTATGTACATGAATCAAAAAATCCTTTCATCAAAGCTAGAAAGAGAGCACAAAACTGACCATAAGTCATTGAATACCTGGAG-----------------------------------------CTCCATCCCAAGAGCCTATGTCTGGCAGAGCTGGTGTGAGAAAAAGAGGCAATCCTTCCCTGCTGCAGGAATAATCAAGCATGTTGGCTGGACCTTGAGTACACATCAGGATAGTGAGGGGCCTGGCAAAAAGCACAGACTATGGCACTGAAAGAAATTAATAAGGGACTTAGTGATTTGGCTTATGACCCTCCAGCACAATGTTTTGCAGGTCCAGTTGGAGATGACATG-TTTCATTGGCAAGCCACGATTATGGGACTTAATGACAGCCCCTGTCAAGGTGGTG
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
10
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
11 >hg17.chrX_3030007_3030565
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
12 CATTGTTTTTGACAAATCAGTTTCCTTTAGACTACACCTTCAAGCCACTTAAGGTTGCATTTACAACAAAAATTTATAATCTAAATATCAACAGTAATGGCAATATTTATCTTGATAATCTCAGATCACAGTGTCTCCTGCTTTAACTA-TTTCTAATGTTCATTTATCCATTTGTTCACTGCTATGTGATCCAAACCCTGATGATCTCCTAGTGCCAGAGACTGCACAGATCT--AAAACAGATAGTGATAAATACAACAGAATATCTTGGGAATGGACTCAGAAGTATGCCATGTGATGTTACCTTAAAGTCAGAATAACTTGCATTTTATAGCTGGAATAAACTTCAAATTCCTATTCCTTTTTTTGATCTCATGTTTTTCATTTT--TTTCTTTTTATTTCCCTCCTTTCATTCACATGTTTATCTAAG-AGACTTAAATTCTTTCAGCTTTAGACAATAACTACTTTTAGAATCTGCAAAGTAGTTACAAGAAAACAGTTGCCCAAGATTCAGAATCTTTTTAAAAAACTGGAGCTTGTCCAGATACA-TATGTAGCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
13 >panTro1.chrX_132731841_132732393
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
14 CATTCTTTTTGACAATTCATTTTCTTACACACTACCCCTTCAAACCACCTATGAAA------ACAATAAAAATTTATCATCTAAATATCAACAGTAATGGCAGCATTTGTCTTGATATTCTCAGATCACAGTGTCTCTGGCTTTAACTAGTTTCTAAATTTCTTCTATCCATTTGTTCACTGCTATCTGATCCAAACCCAGATGACATCCTAGTGCGAGAGCCTGCATGGATCTCTGAAACAGACAGAGGTAAGTACAACAGAATATCTCAGGAATAGACTCAGAAGTATGCCATGTGACGCTGCCTTAAAGTCAGAATAATTTGCA--TTACAGCTGGAATGAACTTTAAACTGCTGCACC-TTTTTTGACCTCatttttttaattttaaattttGTTTATCTCCCCCCATTCATTCATGTGCTTACCTGAGAAGACTTAAGTTATTTAAGCCTTGGATAATAACTGATTTTACAAACTATAAAGTAGTTACAAGAGAACAATTGTCCAAGATTGAGA----TTTAAAAAAGAAAAAACTGGAGGAGGTAGATTATGTGGCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
15
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
16 >hg17.chrX_3030575_3032510
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
17 ttgtttgagacagtgtttctctgtgtagccacatctgttgtggaactcaatttgcaaatcaggctggcctcaaactcacagagatctacctgcctctgcctcttgagtgctagtattaaaggcatatgcaaccactgcctggctaaaataatatttttaaaataaCATGGTTACATGCCAAATTGACAAGGGGTGGATA------AGCCTATACtgatagataatttcacagaatctagaaacaccctggggaaaaatgtttgcacatgcctggg----gccagggagat--gttaatttctttggttatcgaaggagggagacctaatctaattgcctaa-tgaatgaaaagaagtaagtgaagtacctgagctcatctcctgttggttcctaaatgcaaaagcaatgagaccagctagcctcctgtttcttccatttctttcgccaatatcttctctgctatgatggattgtctttcttaaattgattgccaaaatcatctcttattttcttaaattgtttcttgttggttattttgacacatctatgagaaaaggaactaatataGAATGGACATGGTGGTGACTTGGAAAAGTTATGGAGTTACATATGA-TGACCGTGGTCTGACCAGGAAGAGACAGGGACAGATAGTCCAGGTGTCTAAGCACAAAAAAGTAAATAGATATGTCTCAGATAACTGAGAGCCCTATGTGGTTAACAAGCAATTGGGGCATACCAGGGCTTACAAATAAATGCTCTATATGATCCATGTTTCACCTTCTACTTTCCTTCATTGTTACATCCTACCCCATCACATAAAGAAAATATcacacacacacacacacacacatacacacagacagacagatagactgacacacacaaacacacacacacacacagagagagagagagagagagagagagagagagagagagagagagagagagagagTCAAACAGCATTTAATTCCTGTGTAGCAACAAGGACATCTTGCATGCAGTTCAGTCTGGTTAAGGAATGGGAGAAGCAAAATGAGGCTTTAGTCAATGATAGAGGAAGGAAGGGATTTAGATGGGTCTTGAGGCTTTGAAGATGAAGTATTAACCAGGTTGCTTGAAAGATCGCTGTGTCTTCCCTTTTGATGACCCCAAGCACAGAGTACATCACCGTTGTCTTCATATTCTTTTTCACTTTCTGAGGAGCTTTCACCAAAAGCACGTTGCTTTTCATAAACAAAACAACATTTGGATGAGCGACGGCCCAAGTGTTCATTGTCAATAGTGTCACTAGAACACCCAACCTTATTGCCTGACTTCCCCTTCTCTAACTTGTTGGACATATTGCTACTTTTTGGCTTATCACCCAGAACAACTGTGGGATCTGAGATGGATCTTCAGTCAGCTTAG------------------CAGAACTGGAAGCCTGGCAGAGGAGAGAAATCAATGTATCCAAAGAGTCTGAGGAAATAGGAATTTGAAATCAAGTCAGAGTCACAATTAAAATTTAATGTTGCAATTATTTTTATCTTAGAATTC----------GTACACAACTTACTCTTGTTTCTCAGTTGTTGTATGTTCAAATTCATATTTTGAGATCACAGAAAATAATTTGGTTATAAGGGAAATGGTAGAAAGAAAATTTGGGTCTGACTATTTCATTTTCCTCCTGTCAAATGAAAAGGCAAATGCTACCTCTAAATACATATCTTTGTGAAAATAAGATTAGAGAAAGCACCACATGGATTTTAACTTCTGATTTTACTTGAGTAATAACAACAGATACACATGA-TCATTATTTATTTCTGCC-ATATAAGTGATTCTCTGAGTAAGTCTATGGCCTCCTATGTGAACTGATGAGGGTTTGAAGATATGGCTAGAAAAGAACTCAAGTGCCAGGATATAATGGGAATCCAAATTTCATACTAGAATCCTTCAAGAATTATTAATTTA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
18 >panTro1.chrX_132743486_132745311
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
19 ttgtttgagacaggatttctctgtgtagtcgcatctgttctggaactcattctgtagaccaggttggcctcgaactcacagagatctggctgcctctgcctcccaagtgctaagattaaaggcttgtgccatcattgcctggctAAAATAATATTTTTAAAACAACATGTTTACATGTCAAGTTGACAAGAGGTGGACTtgtgatagcctatacttatagctaattttacagcatctagaaacaccctgaggacaaatgtttgggtgtgcaggggcagggcgagggagtgcagttaatagctttggttagcaaaggtgggagacctagtttaactgcctgactgaatgaaaataagcaagtgcggtatcagagctcatctcctgttgcttcctaaatgcagaagcattgggaccagctagcctcctatttcttccatttctgttgccc-catcttccctgctatgatggaataacttccttaaactgattgccaaaatcatctcttatttccttaaattgtttcttgtcagttattttgacacatctatgagaaaaggaactaatataGA-----CATGGTGGTGACTTGGAGAAATTATGGAGTTTGATGTGAGTGAACATGTGTTGACCAGATGGAGATAGATACACATAGTCCAGGTATCTAAAAATTTAAAAA-AAATGTGTATG-----GAGAACTGAGATCCCTATGTGATTAACAAGCAACTGTGGCATACCAGAACTTACAAATATATACTTTATATGATCCATGTTTCACCCTCTGCCTTCCTTCATTGTTACATTCCTCCCCATCACACAAAGAAGACACATCTcacacacacacacacacacacacaca----------------------cacacacacacacacacacaca-------------------------------------------------AGAATCAAACAGCATTTAATTCCTGTGTAGCAACATGGACATATTGCATACAGTTCAGTCTGGTTTAGGGATGGGAGAAACAAAGTGAGACTTTAGTCAGTGATGGAGAAAGGAAGGGATTCAGATGGATCTTGAGTCTTTGAAGATGAAGTACTAGCAAAGTTGCTTGAAAGATCATTTCTTTTTCCATTTTGATGAC-------ACAGAGTTCATCCCAATTGTCTTCATCTTCTTTTTCGCTTTCTAAGGAGCTCTCACCAAAGGCACATGGCTTCTCAGAAACACAACAACATTTGGATGAGAGACGGCCCAAGTCTTTGTTGTCAGTAGCGTCATTTGACCACCCAACCTG---GCCTGACTTTGCCTTCTATAATGGGTTGGACATATTGCAATTTTTAAGCTCAGGCTCCAGCACAACTGTGGGCTCTGAGAT--ATCTTCAGTCATCTTAGATGTTGAATCTTCCATAGCAGACCTGGAAGCTTGGCAGAGGAGAGAAATTCACGTATCCAAAGAGTCCAAGGAAATAGGAAATTGAACCCAAGTCAGGGTCACAATTAGAATTTAATGGTGCAATTGTTTTTGTCCTGGAGTTCTTACCCTGAGGTATCCAACACACTCTTGTTTCTCAGTCTTTGTTTGTTCAAAGCCCAATCTTGAGATCAAAGAAAATA-TTTGATTATGAGGAAAATGGCAGAAAGAAAATCTGGGCCTATCTACTTCAATCCCCTCCTGTCAGATGAAAAGGCAAAT-------------ACATGACTTTGTGAAAATTATCTTAGAGAAAGCACCACATGAATCTTAACTTCTGATTTTATTTGAGTAATAACAACCAACACACACAAATCAATATTCATTTCTATCTATATAAGTGAAACTCAGAGTAAGTCTATGGACTAATGTGTTAACTGAT---------------------------------------------CAAAAGGAATCCGAATTTCATACTAGAATCCTTCAAGAATTATTAATTTA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
20
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
21 >hg17.chrX_3032510_3033698
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
22 TTGTACAAAGAATGTAATTTACTGTGTATCTAAATTTTAATGACATACCAATATGACGGCAGGAAATGGATAGTTTAGAGACTTTGGAGGTTAGTTATTAATATAGATGAGTAAATAAGCATGAACCAATGTCAGTAGTGGTGATAAACAGAACGAAGACAATTGTAGATAATTTGGTCACTGAAA-GGGAAAATTACTTGTTATTAAGGGTGGACATAAATTAGAATGGGGGCAACATCAGACCTGATACAGAGGAGGACAAGACCAGGCCAGAAAAGTTAGCAAACTAATAACCATTGAAAATCAGAATCCTTGGGTTTTAAGTGGCCCACTTTATAACATACCCATTTAATTA---GAATCTCCAACAGGTCTTTCTGGTCTTATCTAGATATTTTGTCAGCAGAC-ATCCTTAGGAGACCAGTTTTGCTGTGGCTTTGTTGTGCTTGCTTCCATGACAACTAAAGACACAAATAGAATGTATTGTTTCTATCCCCCAAGAGACCTGCCTTTGAGTAGTCAACCTACTGATTGACTAGCAAAATAGTTTACCTTATACATTCTTGTGTCATGAGGGACTAGACCTTTACAAAATAAATAAATTGAATTTAAAAACCC---------------------------------------CACAACCTTAAGTCATTTTAATTCCTGTCAGTGCTTGGCAAGGCCTGAGAATTTCATCTACATTATGGAT-CTGTTAAAGCTCTGGTCCTCAAATTTAGGTGTCAGAACTTCTTGAGAAAATTTTCATCAGTGTATACTTATTGAATAAAGCAATGGGTTTCATAAGGCTGCCTTGTTTAAA------TATATCACTTACTTTGACTATATTCACTTTCCATTACTCTCTTCTATCTC----CCACAAGTGTCCTTTTCCATGTTTAATACA--TTTTTTAAAATAACATGTCCTCAGTTCCAACCCAGAAAGTCTAAAATCCAAACCTGCTATAAATCTTTTAATGTTTTACATTCTAAAAGTATGACTGAAAAGTGGTTTGGAAACATTTTTTGGGTCAACATGTTGTTGGCCAAACAAAATATATCAGCAGCCAAAGTCTAGCTCATGATCCCAAAGCATACAATACCAGTAGACTTTAAGTTTTTATTTAATTCTTTTAAAATGTATGTGGGTGACATCTTTGGTAAAATTTTAAATGATATCTGTATAGGTAACTTTAGAATAACACaaataaaaatattt
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
23 >panTro1.chrX_132745427_132746659
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
24 TTATACAAAGAATGCAATTTGCTGTGTATCTTAATTTTAATGAAGTAGCAATGTGAAGACAGTAAATGGATTGTT-AGAGATTTTGGAGTTTAGT----AATGTAGATGAGTAATTAAACATTAACTAGCATCAGTAGTAGTGACAAGCAGAAGGAAGACAACGGTCAGTAACTTGGTCATTGAAACGGTAAAATTACTTGTTATTAAAGGTGGGCATGAATTAGAATGGGGGCAACACCAGATCTGATA---AGGAGGACAAGACAAGGCCAGAAAAATTAGCAAACTAAAAACCATTGAAAATCAGAATCCCAGGGTTTTAAATGGCCCACTTTATAACATACCCATTTAATTATTAGAATCTCCAACAGGTCGTTCTGATCTTATCTAGGTACTCTGTCAGCAGACTACCCTAAGGAGATCAGTTTTGCTGCTGCTTAGTCGTGCCTGTTTCCATGACAACTAAAGACACAAATAGAACGTAC-ATTTCTATCTCCCAAAAGACCTGACTTTGAGTCATCAACCTACTGATTGACTTGCAAAGTAGTTTACTTTATACAAGCTTGTTTCATGAGGGACAAGATCATTATGAAATAAATAAATTTAATT-AAacacacacacacacacacacacacacacacacacacacacacacacacaGCCTTAAGTCATTTCAATTCCTGCCAGTGCTTGGCAAAGCCTGAGAATTCCATTTACATTATGGATTCTGTTAAAGCTCTAGTCCTCAAATTTATGTGTCAGAACTT---AAGAAATTTTTTATCAGTGTATACTTATTGAACAAAGTAATGGGTTTCATGATGCTGTTTTGTTAAAAAAATCATATACCATATATTTTGTCTATATTCACTTTCCATTACTTTCCTCTATCTCTCTCCCACAAATGCCCTTTTCCATGTTTAGTAAACTTTTTTTAAGATTACATGTCCTCAGTTTCAACCCAGAGAGTCTAATCTCCAAACACACCATAAATCTTTTAAATTTTCACATTCTGAATGTATGACAGAAAAGTGTTTTGGAAACATTGTATGGGTCAACATTTTGTTGGCCAAACAAAATATATCAGCAGCCAAAGTCTAGCCCATGATACAAAAGTGTGCAATCCCCGTAGATTTTAGGTTTTTATTTAATTCTTTGAAAATGCATGTGGGCGTCATCTTTGTTAAAATTTTAAACTATGTCTATTTAGGTGACTATAGAATGACACaattaaaaatattt
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
25
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
26 >hg17.chrX_3033698_3034238
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
27 aaaaataaCAGGTCCCCAATGACAACATTTTACGTTGTCACGAGTTTATTAAATCTCAATTATGGACATTGGCAAAGAATTATTAATTAAACAAGAAGCCTGCTTGAGAGCAAAGCACCTTTTTACTTGTATTCATCA--GGGTTTTT---TTTTTCTTTTTGTTATATAGTTCAGT---------TCATGTTTTGGTTCGTGCAGACATCATTGCAGTTAGCACCTAGAAATATTCCAACCTCTCAAACTATCTCTTCCTACCCACATTATTAAAAATCttcttgatccctggcaataatgatttgtgctccatctgtataaattcattatctatataatgtattgtaaaggaattatagacattttgaaattggatttttttcactctctgtaatgcccctgaaacttattcaattattgtttcttctttattattgctgactagtgttgcatttatgaattaacaaagttgttgaagatatttaggttgttttcatttttgaaactatcatgaataaagttatagtcaatactcatacaagacttgtcaga
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
28 >panTro1.chrX_132747053_132747589
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
29 AAAAATGGCAGTTCTTCAATGAGAACAGTTTATATCATCACAAGTTTATTGAAGCTCAATTATGGACATTAGCataatattattaattaaattaCAAGCCTGCTTAAGAGCAAAGCACCTTTTTACTTGTACTTATCACTGGGCTTTTTCGTTGTTGTTGTTGTTATATAGCTCTGTTCAATTGTATCATGTTTTGGTTCAGGCAGACATCATTGCAGTCAACACATAGATAG-----------TCAAACTATCTCTTACTACCCACATTATTAAAAATCttcttgatccctggcaataacaatttgtactcc-tctgtata----cgttatctagacaatgctatgtaaagaaattacagacattttgaaattggatttttttcactcagtgtaatactcctggaatttattcaactgttgtttcttctttgttattgctgactaatgttgcatttatgaattatcagagttgtt-aagatatttaggttgtattca-ttttgaagctatcatgaataaagttgtagtgaacacttatacaacatttgtcaga
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
30
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
31 >hg17.chrX_3035180_3035230
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
32 gtgcataagttttcctacttctagaataaatgcctaaAGGATATGGCAAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
33 >panTro1.chrX_132747589_132747639
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
34 gagcatacattttcctacttctagagtgaatgcGTGAAGGATGTGACAAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
35
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
36 >hg17.chrX_3035230_3035841
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
37 ACTTGtttgttttgtttattagatattttctttagttacatttcaaatgttattccctttccaagtttcctctccaaaaacactctattccttctccctttcccctgctcaagaa------------cccacccactcccacttc-ctagaactgtctgtcccctgtaccggggcttagaacaac-acaggaccaagggcctcttttcccatcgatgaccaactaggtcatcctctgctgcatatgcatgagtaggccc---------tctctgtattttctttgattggttgtttagtcccagggagcttaggggtgg-tggttcattcatattgttgttcctcctaggggaatgcaaatcctttcagcttcttgggaaatttctttagctccttcaatggggatcctgtgctccttctaatggatgactgtgagcatccacttctgtattagtcaggcactggcagagcctctcaggagacagctatatcaggctcctgtcagcaagctcttgttggcatccacaatagtgtctagttttggtgtttgttttggggatggatccccaggtagggcagtctctggatgatcattccttcagtccctgcttcacactttgtctctgtaactgctt
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
38 >panTro1.chr9_84391631_84392261
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
39 ATTATTTttctttctttattcattattttatttatttacattttaaatgttgcccctcttcctggtcccccctcaaagagttctttaccccttct-ccttccccttgcttctgagagagtgatccccaccacccactcctacttcacccccactagcattccccttccctgggacatcaagtttctactggattaagtgcatcctttcctactgagattagaaaaagcagccctctgctacatatgtactgg--ggcccacagactagcccatgtttgctctttggttggtgggttagcctctgggagctccgggaggtccagttagttgctactgttgttcttcctatggggttgcaatccccgtcagctccttcagtccatcccctaactcttccataggagtctctgacctcagtccgaaggctggctgtaaataactgcatctgtctcagtcatctgctggtagagcctctcagaggacagcaatgctaggcttctgtctgcaagcacaacatggcattaataatagtgtc-aggtttggtacctctgcatgggatgaatctcaagttgcgctggtctctgtatggcctttctttcagtctctgccttatg-tttgtccctgcatttcctt
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
40
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
41 >hg17.chrX_3036435_3036947
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
42 tagaaatacctaaacgtctataggaattcactgACAGAAAGGAAAGGTGATGCTCAAAGTCTCAGGGCAGTGCTACAATGCATAGGCAAGCAATACCATTTAAATGGAGAGATTTAAAAAAAATCATTTCTTCACCCATAAACCAGAACCAATTATTCAATATGGTCAAGTACCATGTTTTATTAGAGTTATTTCTGAATTAGATCATTGAACAGGATTCTAACCTAAATAACAAATTT-TATCTAAAACATTTTCTAGACTAAAAAGCATGCTTTGAGCCCTCCTTAAATAAAAAGGCCCATAGTGTATGAAACTAATCAACCATAGATCCTATATTTACTCCACCAATCCTCAGGACAGTTTATACTCTTtgtcctagttgggattttatttatgtgaacagacatcatgaccatggcaagtattataaaggacaacatttaattggggccggcttacaggttcagaggttcaggccattatcatTG----TATTAGTCAGTGTTCTCTGGAGCC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
43 >panTro1.chrX_132751811_132752320
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
44 TAAAAATGCCTAAATTTCTATAGGGATTCACTAACAGCAAGGAAAGGGGATGCTCAAAGGCTCAAAGCAGTGCTATGATGCATAGGCAAGCAATATCATTTAAATAGA-----TTTTAAAAAATCATTTCTTCAACCATAAACCAGAACCAATTATATAATATAGCCAAGAAAGATGGTTTA---GAATTATTTCTGAATTAGATCATTGAATTGGATTCTAACCTAGATAACAAAAAAATAGCTAAAACTCTTTCTAAACAAAAAAGCAAGCTGTGAGCCCTCCTTAATTAAAAAGGGTCATAGTGTATGAAACTGATCAACCAGAGACCCTGTATTAACTCCACCAATCCTCAGAACAGTTTATGGTCCTTCtcttagttatagttttattgctatgaatagacatcatgaccatggcaagtcttataaagcacaacatttaattggtgaaggcttatgggttcagaggtccagtccattatcatTGTATTtattagtcagggttctctaaagtc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
45
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
46 >hg17.chrX_3040801_3041403
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
47 ttttggttaaatggtctggg-ctgtgtattccttgcatctttttgggtgtatttacacttcttttcatgcagaatttttctttctagtttcttgtgtagtactgaattgctggatagatattacttaaatataataatatttgttttttaaatcaggaaatggtcttatttctccactgattataattgatagttt-gctaggtgttgtggtcctggctggcatt---ttttggtctttcataatg----tgtagaccatttgcccaggccctttgagctttcaaagtctccattaaaatcaggtt------ttattataatgggcctgactttatatataacttggtctttttcccttgcagatttcatatcatttctttgttctgtacatttaagtgttttcattattatgtgtcataggaaagggtgtgtgtgaacttttctagtcctgtctggggtgtgttctatatgcctcttgctccttgatatttcactcttgcactatctatgtctaggatattttgtt--------------aaaatattttctgtgcctttgacctgagctttgtctcctttttgtaaacttatcagtcataaattttggtctgtacatagtgtcccagat
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
48 >panTro1.chr5_51053186_51053738
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
49 ttttagtaaactgttcagggattacttgtttcttgtgtcctcttgggtagagctaa--------ccagaatgaagttgtccttctagtgtcttctgtagagctgattc--------------atttaaat-tccttacatttgttttt---attatgaaatgttttcctttctccctcagttaagattgctggttttgctggccatggtagtccgggctggcattatgtcattgttgttcataacaaacttgtaaaatgtctgcc-aggccctctg-gcttttaaaatctcgattgcaagtccattggaaagctctgctaatgaccctgtctttatatgtgacttcatttttaccc-----------------atatccttgttctgtacatgtacgtgcc---------------------aaggagagttt-----cttttctggtcctgtctgtctggtgtcctgtatacctcatgtacttcgata----ggaattgctttctttagatttgggatattttattctatgattttgttaaaggtattttctatggcttttacctgagtttcttctccttcctttatatcaattattcacaggttt-ggtct---cttcttgtcccagat
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
50
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
51 >hg17.chrX_3042536_3043219
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
52 TCCAGATAGTCTGATGTTTTGTGTCTAGATTTTTTCCATTTACTTATTTATtttatttacttattcactttatatcccaatcacagctgcccctactcacagtctcttcctcacaatctttccctcaccccctccccttgtcctctaagaagggggaccccctgggttccaacccacactgTTGTTCCTAGATCtttaagatctaatatttccaatgtcagagatatccattccttccacgttgttccccagaccttaaatt----ctttcacttcattaaatcagttgattaggcttttctctgaggtctttgtttgacttcctgagtttttatt-ttcaagtcttatttcagtttgggtta-atttagtcattctacttctttgtcatattgtattttcatag-ttgaattgtttacatttcctcagtcaactatttttgtcttcagagttctcagtgaaacatttatt-catatcct-tttaaggtccttgaacatatgcataattgctattttgaagtccttaccacatacttcaatctaaattattctttcttagggaatattatagtaaggggttgtttctggtggaggcatattgtcatcactgtttatgtttgttgttttttgtttttttttttgtttttttgttttttgcttttttgCATTGGGATCTAAATATCTAGATTCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
53 >panTro1.chr5_51053738_51054217
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
54 tcc------ttgaatggtttttgcctagagttt--------------------------------aaatttatatt--------------------taacaagctctt--------------------------------------------------------------------------------tggatgattga---------------------------tccatttcttctactttgtcttcaggacctgatattttctcttccacttcattcaat-agttgacgaggctttcttctgagcctgttgtgtgacttcctgctttttttcaattcaggttttacttcaggttgacttgtctttagccagtctatccctttgttaacttctattttcttatcttgaattgtattcattatttcattcatttgtttatgttttcttgatcttcattcaggcatttttttcacagcttctttaaggtc-------atattcataattgctattttgaagtccttgtcttgtgcttcag-ctaagctgatctctc--agggactatgataataggtgctggtttccagaggagacgtagtgtctttgttgtttatgtttgtg-------------------------------------tttttGACATAGGATCCCAGTGTGGATATTGA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
55
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
56 >hg17.chrX_3043247_3043585
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
57 TGTATCTATTTTTGCCTTTTGGGTAGGCATTTAGTTCTTTGGTTGCTATTACTCCTATCTGACAAGTTGTCAACCATCAGAATGATACTTGGTTCTCATTCTTTGAATCACTCGGGATTTTAATATTCGGATTCCAACTTGTACTGGATAGGATTTTCTGGTTGCAACTCTGTGTTCAAACCATAAGCTGTCCCAGATCAATTCAGTGGGTTGTATAGGTAATAGGCTAGCAGTTGAGGAGTGGAGACTGACTCTGGACGTCTTCTAGGTAGGGTTTAGGATCTGGCTCTTAGGGTCAGG---CAAGGCAGAATTATTGTACATTAGTGGCAGTTAGTGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
58 >panTro1.chrX_132759267_132759608
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
59 TATAACTATTTTTGCCTTTTGGGTAGGCATTTGGTTCTTGGGTTGCTATTACTCTTACCTGACAAGTTGTGAACCATCAGAATGATACTTGGTTCTCAGTCTTTGAGTCACCCTGGATCTTAATATTCCAATTCTAACTTGTATTGGATCTAATTTTCTGATTGCAACTCTGGGTCCACACCATAAACTGTCCCAGATCAATGTAGTGGGTGGTTTAGGTGATAGGCTAGCAATTGGAGAATAGCAACTGACTCTGGAGGTCTATTAGCTAGGATATGATATCTGACTCCTGGGAAGAGGGGCAGAAGCAGAATTAGTGTACATTAGTGGTAGTTAGTGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
60
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
61 >hg17.chrX_3044071_3044955
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
62 GTGATGAATCCCAAGGGAATGGATATGGGCTTCAAGGAGGGGTTGAGGTGGGCAGGCACGGAGTAGG----TTTAAGGGGAATTTAAAGAGACTAGAATCAAGAAGATGAAGTAAGGCACAACCAGCCTGTCAACATTCATTGTCCTATGCATATCTGTCTGTAAGACCTAGGATTTGAAGACTTTAAAGAATGAAGCAGAACACAATCTAATACTGTAGACAACTTTATTTCAGTTTCAGTGTTTTTATTCAAAAATTTAATAAAGTAAGCAATGATTCAAGGAAGGTTGTTTGAGTTCAGAAAAAC----ATAAAAGCCAGCAAGCACATGCTAAATATTAACCGAGCAGCTCTTTCAGAGAACTTTCTTAAGACAGACCAATTTAAACACAAATGCCTAGCACCTATTATA---GACTATATCTGAGAAAGCTTGAAAGCAAGGCAGAAGGCCATAACCAGATTCAGGGTACACTGAAAAAAACACTCAGCCTATCCTTCCACCAGACTGGGCTCTGTAGTTGTCTTCCAGCATTTAACATGAATGAATAAACATGCCTTATGAATTGAATGTAAATACTTGACACAGGAGTCATGAAATCACATCCAAGAAAAATACAGGGAACAAAATCCACCTAA-GGAGTGGGAGGAACAGCTTCTTCTTTTTCCTCTGGAACCTCTCTAGCTTCTCTCACAGTTCCCCAAGGCATTCCCT--ATCATGTACCTCAACAGTAGCAGCCTACGTATGTCTCAGCCATATTGGCCATGGATCAATAGAAGAGAATGGAGAGCACAAAGTAATGGAGATGGGCTGGGAGGAATGGCTTAGGTGAGTGCTAGAGCAAAATCTAGGAAGACTCTGGACCTAAGCCACATGTGACATTCCACCCCCA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
63 >panTro1.chrX_132759935_132760824
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
64 GTGATGAATCCCAAGGGAATGGATATGGACTTCAAGGAGGGGTTGAGGTGGGCAGACACGGGGGGGGGGGATCTAAGGGGAATTTAGAGAGACGAGAATCAAAAAGAGAAAATAAGGCACAGGCAGCCTGTCAACTTTTGTTTTCCTATGCAGATCTGTCTATAAGACCTGGGATTTGAAGACATTAAAGGATAAGGCAGAATACAGTCTAATGCTGTAGACAACTTTATTTCAGTTTCAGTGCTTTTATACACAACTGTAA-AACGAAAGCAATGATCCAAGCAAGATTGTTTGAATTCAGAAAAGCATAAATAAAAGCCAGCAAGCACATGTTAAATATCAACAGAACAACTCTTTCCAAAAAC--TCTTAGGACAGACCAATTTAAACACAATTGCCTGGCACCTATTATACACTACTACATCTAGGAAAGTCTGAAAG-AAGGCCAAAGGCCATAACCATTTTCAGGGTACTCTGAAG-----ACTCTGTATATCCTTCTACCAGACTGGGCTCTGTAGCTATCTTCCAACATCTAACATGAATGAATAAACATGCCTTAGAAATTGAATGCAAATACTTGACACAGGAGGCATGAAATCATATCCAAGAAAAATCCAGGGAGCAAAATCTGCTTAATGGGGTGGGAGGAACAGCCTCTGTCTTTGTCCCTGGAACCTCTCTAGCTTCTTCCACAGTTCCCCAAGGCATTCTATTGACCATGTTCCTTGACAGCAGCAGCCTACCTGTGTGTCAGCCATATTGGCCATGGATCAGTAGAAGAGAATGAAGAGCACAAAGGAATGAACATGGGCTGGGAGGAATGTCTGAGGAGGATGATGAAGGAAAAACTAGAGGAACCCTGGGTGTACTCCACATGTGACAGTAAGTGCCAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
65
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
66 >hg17.chrX_3044955_3044983
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
67 TGACATACTTCCTCCATCTAGGCCACAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
68 >panTro1.chrX_132767879_132767907
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
69 tgacacacttcctccctcaaggccacac
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
70
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
71 >hg17.chrX_3045355_3046390
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
72 CTActccaacaaggccatatctcataaccctaccaaagattctactccctgatgactaagctttcaaatatatgagcctgtgagggacattcttatttaaaccactacaGCTAGAAAAAT-TACAAATGTTTTTATTTGCATTTCCCTGATGGATACAGATTGTTTTAAtaatttcctttttgctcctgtgataaaacactgaccaaaagcagcttggatgaggaaagggtt-----gtttagtttacagattgcagccta--------------------------------------------------------------------------------------------tctttgaggtaagctaaggcaaaaactaaagTTAATTTTT---AAAATATAGTAATTTCATGTAATGATTCATTGATTCAACAAAT----------TACTGGCTATGTTATAGGTcagtagttatcaacctttctaacactgcaactccttttgctataatgacctcaaccataaaattacttttgttgctacttcaaaactgtaattt-gtttctattatgaattataatgtaaatatatgatatgcagggtatctgatatatgaccgtcaaaagagttataacccacaagttgagaagcacAGTTCTCGATGCTTTTTAAGGTACTAGGATGTAACTGAATGAGACACAATGTTGTTGTGCTCAAGATGATTTTTTCTTTGAGTAAAACTGACA--AATGAGCTGGCACTATAgagatggttcagccagtaaagtagttacaggacaatgtaataacgtgagactgagtccccagcatccaaagaaaagtctgggcattgcaacttgcatctgtagtcacagtactggggaggtggagacatgagaaccactagagttttctgaacaaatttgtgaactcgagattcattgatagattctatctggaaaTTGAAGGAAACACCTTAATGACTTCAGGCC---------ATGTGCTTGTATACTCATGTGCTATACACATTTAAATacacgcacacatacatacacacacacacacatacacacacgcac-----------CACATTCTATTAAAAATAATTCACATGATGTCCTACAGTGAAAAATGGAGCAACAGGATCATGGGTTTAAAAAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
73 >panTro1.chrX_132767907_132769035
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
74 ctactccagcaagtcc-----tcataatcctatcaaagattctactccctggtgactatgcatttaaatatatgagtccatgagggacattcttatttaaaccaccccaGCTAGAAAAAAACATAAATATTTTTATTTGCATTTCTCTGATGGATGCAGATtgttttaataatttcctttctgctcctgtgaaaaaacactgaccaaaagcagcttggatgaagaaagtatttttttatttagtttacagattaaagcctatctttttttggggggggggactgaacccagggccttgcgcttcctaggcaagcgctctaccactgagctaaatccccaacccctaaagcctatctttgagataagccaaggcaaaaactcaagTTATTCTTTTTGAAAATACAGTAATTTCACATCATCattcattgattcaacacatatttatggaatattggctatgATATAGATcagtggttcttaaccttcctaatgctacaaccctttatgctgtggtaaccacaaccataaaattacttttgtttctacttcataactgtaattttgttactgttatgaattataatataaatatgtgatatgcaggatatctgatgtatgacccctgaaagagttatgacccacaggttgagaaGTAGTGCTCTAGATCCTTTTCAAGAGACTAAGATGTAACTGAATGGGACACAGTGTTGT---ATTCAAGATGATAATTTTTTGGAGTAAAACTGAAAGTAATAAACTgg-actaaagagatagctcagacagtaaagtgcttgcag-------------------------tctccagcatccacagaaaagactgggcattgcaacttgcacctgtagtcacaggactggggatgtgaagacaggaggaccactggagtgtgctgagcaaattggtgagctctagattcattgagcgatcctatctcaaaactgaaggagacaccctaatgacttctggcctctacaaccatgcacttgtatacacaTGTGCTACACACATTTAAATtctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctntAATAAAAA-AATTCA-ATAATATCCTACAGTAAAAAA-----AAACCCATTCATGGGTTTAAAAAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
75
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
76 >hg17.chrX_3046547_3047589
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
77 CTTTGAGCAAGTGATGTTTAAGTCAAGACAGGAAAGACATCAACTTGGAAAGGTTGTGAAAAGCATTATAAGTAAGAAATACTTTTACTGCAAAAGTTTTCAAATTCAAAACAAACTTGTTACCTTTGAGAATGTACAGGCAACATTAGTGTGGCTGTCATAAACACTCAAAAAAAAAAAGTAATAACCCAGAGCAGTACTTTA--------------------------------------------AACCTTGCATAGTGGTACATAATTAAAATCCTAGCTCTGGAGAGACTAGGGCAGGAGGGTCATGACTACATAATGGTACACTCTCAAAAAGAAGAAAAACAACCCTCAAAGTAAGAAGCTCTTATAATATG-TTCCCAATTGTTTCTTTGTGAAAATGTAATGCCATTAACATGTTCTGTATCATTTTAGTACATTGTATCTGTATATGTGTTT---GttaatttataaaatattaaattttatCTATGACTAAAAATGAGTGAAAACTGAAAGTTAAAAATTAAAGAGTTGTCATCCAACAAGTATACCTGACATACAGCtttactgcaaattatttatctatgtaaattataacagaaaattgtatgtataaattatcaatttataaaagtatacaatagaaaattagcaatttattattatataaattgtttaaaattcattatttgatattttaatacataaatgaaatatatttagggagaaatttaacttcctagatattatttaagtaagtataacatttaaattttgcttaatgtaagaaaatgcattgctagatactcatataatgtcaatacattttctattcatcacttataaatagtgacaagttataaagcttct-------------gCTTGGTTAAAAGGTAAAAAGCATAAGGCACAAATACATTAAAGATAATGCATGAGACAAGGTGAGGGCAGCCAGTAGACAAACATAAGCTACTTGTTAATGCATGACTTCATGAATGATCACTGAATTGTAAATACTCCAGATGGTATGAAGAGCTCATCAGAGATGACCACTCAGACACCGTGTATCGCTAATTAAATGTGTTTAGTCTAGC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
78 >panTro1.chrX_132769038_132770071
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
79 TTTTGAACAAGTGATGTTTAATTCAAGACAGGAAAGACATCAACTTTGAAAAGTTATGAAAAGCTCT----GTAAGAAATAATTTTAGTGCAAAAGCTTTCAAACCCAAAACAAACTTGTTACCTTGAAGAATGCACAGAGACCATTAGTATGGCTGTCATACATACTCAAAAGAAAGAA--AATCTCCCAGAGCAGCACTTTACTACTTTTCATCATTGTGTTTTCCCGACTAAAAATACATTTTTTAAACTGGCATAGTGGTACACAATTGAAATCCTAGCTCCTGAGACTCTAGGGCAGGAGGGTCATGGCTACATAATGGTACACTCTCAAAAAGAAAGAA---AACTCTTAAAGTAAGAAGCTTCTAAAATATGTTTTCCAATTGTTTCTTCACGAAAATTTAATATCA-----GTGTTCTGTATCTTTTTAATACA-TGTATCTGCATATGTGTTTATAGTTAATTTATAAAATAGTAAACTTTATCTAGAACTAAGAATGAGTAAAATTTGTAAGTTAAAAATCAAAAAGTTGTTATCTAACAAGTACACTTGACATATGGTATTACTGAAAATTATT----TATGTACATTATAAC--AAAATTATATGTACAAATTATCAATTTATAAAATTATACAATAGAAA----------------------------------------TTTTGGTAACTTCATACATAAACGAAATGTACATAGGGAGACAATTAACTTCCTAGATA----TTTAGTAAATATAACATCTGAATTTTGCTTAATGTAAGAAAATACATTTctagatacacatataatatcaatatatt-----ttcatcacttataaacagtgacaagttataaagctacttaataagatgtaaactacatctaattttaaaaagcataagacacaaggatactaaagataatacatgagacgaggtgagggcagccagtagacatacacgggctacttGTTAATGAATGAATTCATGAATGATCTCTGAATTGTAAATTCTTCTGAtggtatggggagctcatcagagatgagcactcagacacagtgtatagccaataaaaagtctttattctagc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
80
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
81 >hg17.chrX_3047589_3047634
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
82 CTGTTAGGG-----ACCTGGGTATAGCCCCAAGTGTTCAGAATGTGAGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
83 >panTro1.chrX_14222367_14222417
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
84 CTGGAAGGAACTACACCCAAGTACAGCCTTGAGTGTCCAGAACATAGGAT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
85
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
86 >hg17.chrX_3047634_3047719
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
87 TAGTTAAACCTGGATTGGTCTCAGCAAGACTATAAGATAAAGGAACCTTACACCTTAACACTGTTTTGCCCAGTTACAAAGGTac
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
88 >panTro1.chrX_14222570_14222648
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
89 TAGTTTAACCTGCAGTGGCCTCAGCAAGAATACAAGATGGAGGA-------ATTTCTGCATTGCCTTGCCTGCTGACAAAGGGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
90
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
91 >hg17.chrX_3049057_3049300
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
92 ctcctgtaccatgcctgcctggatgctgccatgctcctgcctagatgatagtagactgaacttctgaacctctaagccagcccaaattaaatgttgtccttataaaagatgccttggtcatagtgt----tctcatcagtaaaaccctaa----GACAGAAGTTGGTACCAGATACGGGGGTTATTTGTTTCTTGAGGAATCATGAACTCTGAATACTGTG--------CCCAGGGGCATTCTGAAGATCTCATTAGAA
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
93 >panTro1.chrX_132770072_132770321
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
94 ctcctgcaccatgcctgcctggatactcccatactcccaacttgatgataatggactgaacctttgaacctgtaagccagccccaattaaatgttgtccttataagagttgccttggtcatggtgtctgttcacagcagtaaaatcctaactaagacaGGAC----------ATATGGGTTTTATCTGCTTCTTGGGGAATCATGAACTCTGAACATTGTGCTAATATACCTAGGGCCAttctgaagatcatattagaa
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
95
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
96 >hg17.chrX_3049300_3049850
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
97 GGTTTTGTTAGATATTCTTTCAGATTAAAACATTCCATCCTAGAAGGAGGAAGAGGGTTTATAAAACTCAAGGACTATCACAATTTAA--GACTAATGAAACTCTGGGAA-TTCACAAAAGTCACATGGCCATCCCCAATGTTCTACAAGTAGTGAACAATTGCAGGCAGGAGTG-AGGGGTTTCCTTCAGTGGGGATTCCTGAAAGTTGGTCAGAGAGCTCTAGGGACGTAGTTTTCATTAATCATTATCAACACTGAGTAAGGCTTTCTGGTAATGGAGCTGACATTGAAtcatctgtgttcctttcagtgacctcaataaactcattggttcactaagctaaaatcaggtgCAATGATGTTGGCTTTGTTTCACTC--------------------------------------------AACGTCCTACTTGGAGTAAACATATACTTGTTCATATATTTTCAGGAAAATTTACACAACAGAAGGTAGAAACTTCTAAACAAAAGAATATTTCTCTTTGTTAGTTTAGTCTACTCACTCTATATGGAAAATAAGGATGGAAAAGAACACCACCACCCCCTACAttaatttgggc
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
98 >panTro1.chr15_879491_880081
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
99 GTTTTTCTTAGGTGTTCCTTCAGATTAAAATATTCCATG-TGGAAGGAGGAAAAAGGTTTATAAATCTCAAGGACTATCTCAATTTAAAAGACTCATGAAACTCTGAAAACTTAACAAAAATCACATAGCCTCCCCCAATATTACATAAGTAGTGAACAATTGTGGGCAGGAGTGAAGGGGTTTCCTTCAGTGTGGGTTTTtgcaagttgggcagagagttctagggaatcaattttcataaatcagcatcagcattggggcaagctttctgttaatggagctgatg-tgagtcatccgtgttcctttcaatgacctcaacaaactcattggttctccaagctaaaatcaggtgctatggtgtagtctttgtttcactctgattaattaattaattaattaattaattaatcaagtaattgttaatgtcctacttg--gtaaacatacgtttatctaactattttcaggaaaattcacacaacaGAAGGTCGAAACTTCTAAACAAAAGAGTATTTCTCTTTGTTAGTTGAGTCTA--CACTCGATAGGGAAA--AATGAAGGAAAAGAAATCCCCCATTAAGTAAACTCACTTAGAC
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
100
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
101 >hg17.chrX_3054999_3055956
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
102 CATCTGTCTAAGATGt---aattatatattttattaataa---ttatattaGCCTAGTTGTTAAACAAG----TTAAGTGTTTCTAATgtgatcctatttaaatataataag-------------cttaactgcataaatgccaaaaatatctccttctctcactcaaggtaaaggcaaaattcacctgtagagtttgtaacctgcagagctttgagctttctgactccactatgacttctagaaaatcacct--cacagttctctgcctccctccatcagttccagccatgcctctatcccagctgcttctcctcatgcatgcaaggtcttctctgacaactgagcctcagcaactgtcatcactttagctggaatgcatatttctcTTGACTGCTGCTGGAGGCCACAGTCTACCTGCATGT-----------------------------------------TTTCATTCCACACCCAAAGGTTCCTTGATAACTTTCCTGGCTATTCTGACTCTCTGAAAAGAATGCTCACCCTGGAATTTCATTTCCTTGAAGCTAGGCCTTGTCATGCTCCCTCTTATCACTTACCAATATGAAAATATTTCATACTGACTTAATAGCTACATGGCTATATGGCTCAtttcccagactaggatgagaactccatgaggataagatctgttcatttgctgcctctggtccttgcagtgtccaaaacactgcactgCAGAGACCACTCACAGTGTTTATGGGACATAGGTAAAACAAATGAACTGAGTGATAATCCATGGGATTGAGCATGTAAAATTACACAGGCATGCCTGGGTCTAGCCATATAGCTACCTACTAATGCACTTCCCACCAGGATCTAGGCTTGCAGGGCACGGTGAAATAGGGCAACTGGAGGCATGGCCAAGAGAAATCTTTCCAAGGTTGAAAT------GACTTTTCCATATACCAGGGTGATTTTATCCTTTTTTTAGAATGTGAGGCCTATTCCAAAGCCATTACATGATATGAACt
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
103 >panTro1.chrX_27929766_27930764
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
104 CACCTACTTACAATGTGGAATTTATATATTTGATTTTCATGCTCCAAATT--CCAAGATTTTTGAGAAGATTTTCAGGAGTTGCTGcagtgtgcctgttaaaatatgacaaaaactatgagatgcttcaactttaaaagcactaa---catgtccccctctcactcaaggtaaaagcaaaattcctctgtagaagttttaacctgcagggctttgggctctctgacacccctgtgacttctgagaaatcacttttcacaattttctaccacccttcatcatatccagccatgccttcatcccagctgcttctcctcatgcatgccaggtcttctctggc---------ccagcaattgtcatcacataagctggaatgcacattccccTTGACTGCTGTTGGAtctctctctctctctctctctctctctctctctctctctctctctctctctctctctcCTTGTTCCATTCTAAACCTAGAGCTTCCTTGATACCTTTCCTGACCATTGTAACTCTCTGAAAAGAATGCTGGCCCTGAAATTTCATTTTCTTGAACCTAGACTTGGT-GTGTCCCCTCTTATCACTTACCAATATGAAAATGCTTCAGATAGGCTTATTAGCTACAGGAATATATTGCTCATTTCCCACACTAGGAGGAGAACTCCAAAGGGATACGATCTGTCCATTTGCTGCCTCTGCTGACTGCAGTATATAGAACACTGCATGGC----------CAGAGTGTTTATGTGACAAAGGTAAAACAAATCAATTGGGTGAGAATCTGTGGAATCAAGCATGTAAAGTGAGACAAGTATCCCTGGGTCTAGCCATAATGCTATA----AATGCACTTCCTAACAGGGTATGAGCTTGAAGGGCAGGGTAAAGCAGGGCAACTGGAGGCATGCTCAACAGAAACCTTTCCAAGGTTGAAATGTGATGGCCTCTTCCTTACACCATGGTGCTTGTATCC--TTGTTGGAATGTGGGTCCTGTTCAAATGCCTTTACATGATATGAACT
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
105