Mercurial > repos > jjkoehorst > sapp

annotate rnaseq/cutadapt/test-data/codingSnps_inputGenes1.bed @ 11:a712b378e090

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cutadapt added
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 16:33:42 +0100
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
11
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
1 chr1 67051161 67163158 ENST00000371026 0 - 67052400 67163102 0 17 1290,157,227,99,122,158,152,87,203,195,156,140,157,113,185,175,226, 0,9470,13929,14921,20694,21100,22735,24819,27578,34593,49256,58479,61890,78263,80338,92310,111771,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
2 chr1 67075869 67163055 ENST00000371023 0 - 67075923 67162979 0 10 198,203,195,156,140,157,113,185,175,123, 0,2870,9885,24548,33771,37182,53555,55630,67602,87063,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
3 chr1 1843259 1849228 ENST00000378596 0 - 1843585 1847183 0 10 428,135,161,133,155,130,156,120,56,1278, 0,628,1024,1406,1814,2430,3822,4267,4496,4691,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
4 chr1 1874611 1925136 ENST00000270720 0 - 1876876 1912255 0 18 2538,165,90,67,119,174,156,199,158,103,111,174,105,99,144,85,86,137, 0,3307,5807,6651,10436,11575,13058,15322,17346,18667,19624,20712,32073,33624,35199,35576,37577,50388,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
5 chr1 1838889 1840572 ENST00000310991 0 - 1839180 1840564 0 5 572,179,42,44,92, 0,662,1302,1454,1591,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
6 chr1 1838888 1840096 ENST00000378602 0 - 1839180 1839855 0 2 573,545, 0,663,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
7 chr1 1672537 1699769 ENST00000344463 0 - 1674202 1686705 0 14 1822,83,158,100,155,103,86,155,204,143,169,84,219,182, 0,2328,2812,3045,3305,4135,5019,5264,5868,7862,8495,10713,13989,27050,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
8 chr1 1836125 1838593 ENST00000307786 0 + 1836579 1838492 0 6 481,51,175,145,101,148, 0,858,1614,1925,2147,2320,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
9 chr1 1672530 1701368 ENST00000378625 0 - 1674202 1686705 0 14 1829,83,158,100,155,103,86,155,204,143,169,84,219,165, 0,2335,2819,3052,3312,4142,5026,5271,5875,7869,8502,10720,13996,28673,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
10 chr1 1672537 1699769 ENST00000341426 0 - 1674202 1686705 0 12 1822,83,158,100,155,103,86,106,130,84,219,182, 0,2328,2812,3045,3305,4135,5019,5264,5942,10713,13989,27050,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
11 chr1 1540746 1555847 ENST00000378710 0 + 1540873 1555773 0 19 130,107,311,172,107,195,143,105,163,134,149,157,161,127,234,179,182,66,313, 0,1004,7885,8270,9291,9487,9782,11146,11333,11570,11792,12169,12515,12769,12985,13629,13881,14135,14788,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
12 chr1 1672530 1700089 ENST00000341991 0 - 1674202 1686705 0 12 1829,83,158,100,155,103,86,106,130,84,219,45, 0,2335,2819,3052,3312,4142,5026,5271,5949,10720,13996,27514,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
13 chr1 1540746 1555847 ENST00000355826 0 + 1540873 1555773 0 20 130,107,311,172,107,195,143,108,105,163,134,149,157,161,127,234,179,182,66,313, 0,1004,7885,8270,9291,9487,9782,10042,11146,11333,11570,11792,12169,12515,12769,12985,13629,13881,14135,14788,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
14 chr1 1836125 1838593 ENST00000378604 0 + 1836579 1838492 0 5 481,175,145,101,148, 0,1614,1925,2147,2320,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
15 chr1 1540746 1555847 ENST00000357882 0 + 1540873 1555773 0 19 130,107,311,172,107,143,108,105,163,134,149,157,161,127,234,179,182,66,313, 0,1004,7885,8270,9291,9782,10042,11146,11333,11570,11792,12169,12515,12769,12985,13629,13881,14135,14788,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
16 chr1 1540746 1555847 ENST00000357882 0 + 1540873 1555773 0 19 130,107,311,172,107,143,108,105,163,134,149,157,161,127,234,179,182,66,313, 0,1004,7885,8270,9291,9782,10042,11146,11333,11570,11792,12169,12515,12769,12985,13629,13881,14135,14788,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
17 chr1 67075991 67163158 ENST00000395250 0 - 67075991 67113089 0 11 27,45,203,195,156,140,157,113,185,175,226, 0,31,2748,9763,24426,33649,37060,53433,55508,67480,86941,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
18 chr1 201326404 201403155 ENST00000309502 0 + 201364592 201401651 0 6 81,18,100,155,398,2144, 0,1039,37175,37624,38131,74607,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
19 chr1 8335052 8508585 ENST00000377464 0 - 8337733 8508430 0 17 2715,181,147,721,223,1379,114,162,200,93,163,81,99,100,125,49,181, 0,3013,3694,5790,7358,7706,9357,10277,11650,12340,13406,70321,113519,142657,144999,156220,173352,
a712b378e090 cutadapt added
jjkoehorst <jasperkoehorst@gmail.com>
parents:
diff changeset
20 chr1 8335054 8800286 ENST00000400908 0 - 8337733 8638943 0 23 2713,181,147,721,223,1379,114,162,200,93,163,81,99,100,125,49,105,97,106,126,71,469,481, 0,3011,3692,5788,7356,7704,9355,10275,11648,12338,13404,70319,113517,142655,144997,156218,188805,204066,205009,262152,271901,303564,464751,