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comparison rnaseq/cutadapt/test-data/extract_genomic_dna_out1.fasta @ 11:a712b378e090

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cutadapt added
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 16:33:42 +0100
parents
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comparison
equal deleted inserted replaced
10:3378d12591ea 11:a712b378e090
1 >hg17_chr1_147962192_147962580_-
2 ACTTGATCCTGCTCCCTCGGTGTCTGCATTGACTCCTCATGCTGGGACTG
3 GACCCGTCAACCCCCCTGCTCGCTGCTCACGTACCTTCATCACTTTTAGT
4 GATGATGCAACTTTCGAGGAATGGTTCCCCCAAGGGCGGCCCCCAAAAGT
5 CCCTGTTCGTGAGGTCTGTCCAGTGACCCATCGTCCAGCCCTATACCGGG
6 ACCCTGTTACAGACATACCCTATGCCACTGCTCGAGCCTTCAAGATCATT
7 CGTGAGGCTTACAAGAAGTACATTACTGCCCATGGACTGCCGCCCACTGC
8 CTCAGCCCTGGGCCCCGGCCCGCCACCTCCTGAGCCCCTCCCTGGCTCTG
9 GGCCCCGAGCCTTGCGCCAGAAAATTGTCATTAAATGA
10 >hg17_chr1_147984545_147984630_+
11 ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTT
12 TGATCCCGCGGTCCCTTCCTGTACCTTGTCCTCAG
13 >hg17_chr1_148078400_148078582_-
14 GTTCTCAGCTTCCTTGCTTCCATGGCTCCAGCACCATTCGAAACCTCAAA
15 GAGAGGTTCCACATGAGCATGACTGAGGAGCAGCTGCAGCTGCTGGTGGA
16 GCAGATGGTGGATGGCAGTATGCGGTCTATCACCACCAAACTCTATGACG
17 GCTTCCAGTACCTCACCAACGGCATCATGTGA
18 >hg17_chr1_148185136_148185276_+
19 ATGGAAGCGTTTTTGGGGTCGCGGTCCGGACTTTGGGCGGGGGGTCCGGC
20 CCCAGGACAGTTTTACCGCATTCCGTCCACTCCCGATTCCTTCATGGATC
21 CGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCA
22 >hg17_chr10_55251623_55253124_-
23 TCTTTTCCTTCTCTACCATTTTCAACAAAGCAGGGGAAATAACTCAGTCT
24 CAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCAATACT
25 ATTGAGGCTCACAAGTCAGCTCATGTAGACGGATCACTTAAGAGCAACAA
26 ACTGAAGTCTGCAAGAAAATTCACATTTCTATCTGATGAGGATGACTTAA
27 GTGCCCATAATCCCCTTTATAAGGAAAACATAAGTCAAGTATCAACAAAT
28 TCAGACATTTCACAGAGAACAGATTTTGTAGACCCATTTTCACCCAAAAT
29 ACAAGCCAAGAGTAAGTCTCTGAGGGGCCCAAGAGAAAAGATTCAGAGGC
30 TGTGGAGTCAGTCAGTCAGCTTACCCAGGAGGCTGATGAGGAAAGTTCCA
31 AATAGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAA
32 AGCTGAAAATGAAAACACTGGAATCTGTACAAACAAAAGAGGTAGCAGCA
33 ATCCATTGCTTACAACTGAAGAGGCAAATTTGACAGAGAAAGAGGAAATA
34 AGGCAAGGTGAAACACTGATGATAGAAGGAACAGAACAGTTGAAATCTCT
35 CTCTTCAGACTCTTCATTTTGCTTTCCCAGGCCTCACTTCTCATTCTCCA
36 CTTTGCCAACTGTTTCAAGAACTGTGGAACTCAAATCAGAACCTAATGTC
37 ATCAGTTCTCCTGCTGAGTGTTCCTTGGAACTTTCTCCTTCAAGGCCTTG
38 TGTTTTACATTCTTCACTCTCTAGGAGAGAGACACCTATTTGTATGTTAC
39 CTATTGAAACCGAAAGAAATATTTTTGAAAATTTTGCCCATCCACCAAAC
40 ATCTCTCCTTCTGCCTGtccccttccccctcctcctcctatttctcctcc
41 ttctcctcctcctgctcctgctcctcttgctcctcctcctgacatttctc
42 ctttttctcttttttgtcctcctccctctcctccttctatccctcttcct
43 cttcctcctcctACATTTTTTCCACTTTCCGTTTCAACGTCTGGTCCCCC
44 AACAccacctcttctacctccatttccaactcctcttcctccaccacctc
45 cttctattccttgccctccacctccttcAGCTTCATTTCTGTCCACAGAG
46 TGTGTCTGTATAACAGGTGTTAAATGCACGACCAACTTGATGCCTGCCGA
47 GAAAATTAAGTCCTCTATGACACAGCTATCAACAACGACAGTGTGTAAAA
48 CAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACACGTTAAAAACTTA
49 GCAGAACTTGAAAAATCAGTAGCTAACATGTACAGTCAAATAGAAAAAAA
50 CTATCTACGCACAAATGTTTCAGAACTTCAAACTATGTGCCCTTCAGAAG
51 TAACAAATATGGAAATCACATCTGAACAAAACAAGGGGAGTTTGAACAAT
52 ATTGTCGAGGGAACTGAAAAACAATCTCACAGTCAATCTACTTCACTGTA
53 A
54 >hg17_chr11_116124407_116124501_-
55 ATCCAATGGATTTGAACAGAAGCGCTTTGCCAGGCTTGCCAGCAAGAAGG
56 CAGTGGAGGAACTTGCCTACAAATGGAGTGTTGAGGATATGTAA
57 >hg17_chr11_116206508_116206563_+
58 ATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTC
59 TGCCC
60 >hg17_chr11_116211733_116212337_-
61 CCTAAAGCTCCTTGACAACTGGGACAGCGTGACCTCCACCTTCAGCAAGC
62 TGCGCGAACAGCTCGGCCCTGTGACCCAGGAGTTCTGGGATAACCTGGAA
63 AAGGAGACAGAGGGCCTGAGGCAGGAGATGAGCAAGGATCTGGAGGAGGT
64 GAAGGCCAAGGTGCAGCCCTACCTGGACGACTTCCAGAAGAAGTGGCAGG
65 AGGAGATGGAGCTCTACCGCCAGAAGGTGGAGCCGCTGCGCGCAGAGCTC
66 CAAGAGGGCGCGCGCCAGAAGCTGCACGAGCTGCAAGAGAAGCTGAGCCC
67 ACTGGGCGAGGAGATGCGCGACCGCGCGCGCGCCCATGTGGACGCGCTGC
68 GCACGCATCTGGCCCCCTACAGCGACGAGCTGCGCCAGCGCTTGGCCGCG
69 CGCCTTGAGGCTCTCAAGGAGAACGGCGGCGCCAGACTGGCCGAGTACCA
70 CGCCAAGGCCACCGAGCATCTGAGCACGCTCAGCGAGAAGGCCAAGCCCG
71 CGCTCGAGGACCTCCGCCAAGGCCTGCTGCCCGTGCTGGAGAGCTTCAAG
72 GTCAGCTTCCTGAGCGCTCTCGAGGAGTACACTAAGAAGCTCAACACCCA
73 GTGA
74 >hg17_chr11_1812377_1812407_+
75 ATGCTCCACCTGCATGGCTGGCAAACCATG
76 >hg17_chr12_38440094_38440321_-
77 GAGCTTTCTTCCTCTATGCTGGATTTGCTGCTGTGGGACTCCTTTTCATC
78 TATGGCTGTCTTCCTGAGACCAAAGGCAAAAAATTAGAGGAAATTGAATC
79 ACTCTTTGACAACAGGCTATGTACATGTGGCACTTCAGATTCTGATGAAG
80 GGAGATATATTGAATATATTCGGGTAAAGGGAAGTAACTATCATCTTTCT
81 GACAATGATGCTTCTGATGTGGAATAA
82 >hg17_chr13_112381694_112381953_+
83 ATGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTA
84 CCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGA
85 AGATGGACCCGGCAGGTCTGGAGGGAGGCCCCCGTGATGAATCCCGTGAT
86 GAGCCGCCGATCCGAGCTCAGGCTGCGTCATGGGACCAGCCACAAGGTTG
87 CCTGACCTATAAAGGTCGCAGGAGTGCCTCAGGGACACAGAAGCAGTTAC
88 AGCTGCCAG
89 >hg17_chr14_98710240_98712285_-
90 GTAAAGATGAGCCTTCCAGCTACATTTGCACAACATGCAAGCAGCCCTTC
91 AACAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCACGGCTTCCG
92 CATCTACCTGGAGCCCGGGCCGGCCAGCAGCTCGCTCACGCCGCGGCTCA
93 CCATCCCGCCGCCGCTCGGGCCGGAGGCCGTGGCGCAGTCCCCGCTCATG
94 AATTTCCTGGGCGACAGCAACCCCTTCAACCTGCTGCGCATGACGGGCCC
95 CATCCTGCGGGACCACCCGGGCTTCGGCGAGGGCCGCCTGCCGGGCACGC
96 CGCCTCTCTTCAGTCCCCCGCCGCGCCACCACCTGGACCCGCACCGCCTC
97 AGTGCCGAGGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTCGACCG
98 AGTCATGCGCCTGAACCCCATGGCCATCGACTCGCCCGCCATGGACTTCT
99 CGCGGCGGCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGCCGCCCGTG
100 TCCCCGGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCCCTTCCAGCC
101 CAGCCCCAAGTCCCCGTTCCTGAGCACGCCGCCGCTGCCGCCCATGCCCC
102 CTGGCGGCACGCCGCCCCCGCAGCCGCCAGCCAAGAGCAAGTCGTGCGAG
103 TTCTGCGGCAAGACCTTCAAGTTCCAGAGCAATCTCATCGTGCACCGGCG
104 CAGTCACACGGGCGAGAAGCCCTACAAGTGCCAGCTGTGCGACCACGCGT
105 GCTCGCAGGCCAGCAAGCTCAAGCGCCACATGAAGACGCACATGCACAAG
106 GCCGGCTCGCTGGCCGGCCGCTCCGACGACGGGCTCTCGGCCGCCAGCTC
107 CCCCGAGCCCGGCACCAGCGAGCTGGCGGGCGAGGGCCTCAAGGCGGCCG
108 ACGGTGACTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCACGAGCCg
109 gaggaggaggacgaggaggaggaggaggaggaggaggagCTGCTACTGGA
110 GAACGAGAGCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCC
111 GCAACCGCGAGAACGGCGGTGGTGGGGTgcccggggtcccgggcgcgggg
112 ggcggcgcggccAAGGCGCTGGCTGACGAGAAGGCGCTGGTGCTGGGCAA
113 GGTCATGGAGAACGTGGGCCTAGGCGCACTGCCGCAGTACGGCGAGCTCC
114 TGGCCGACAAGCAGAAGCGCGGCGCCTTCCTGAAGCGTGCggcgggcggc
115 ggggacgcgggcgacgacgacgacgcgggcggctgcggggacgcgggcgc
116 gggcggcgcggtcaacgggcgcgggggcggCTTCGCGCCAGGCACCGAGC
117 CCTTCCCCGGGCTCTTCCCGCGCAAGCCCGCGCCGCTGCCCAGCCCCGGG
118 CTCAACAGCGCCGCCAAGCGCATCAAGGTGGAGAAGGACCTGGAGCTGCC
119 GCCCGCCGCGCTCATCCCGTCCGAGAACGTGTACTCGCAGTGGCTGGTGG
120 GCTACGCGGCGTCGCGGCACTTCATGAAGGACCCCTTCCTGGGCTTCACG
121 GACGCACGACAGTCGCCCTTCGCCACGTCGTCCGAGCACTCGTCCGAGAA
122 CGGCAGCCTGCGCTTCTCCACGCCGCCCGGGGACCTGCTGGACGGCGGCC
123 TCTCGGGCCGCAGCGGCACGGCCAGCGGAGGCAGCACCCCGCACCTgggc
124 ggcccgggccccgggcggcccAGCTCCAAGGAGGGCCGCCGCAGCGACAC
125 GTGCGAGTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACTTGACGGTGC
126 ACCGGCGGAGCCACACCGGCGAGCGGCCTTACAAGTGCGAGCTGTGCAAC
127 TACGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACATGAAGACGCACGG
128 GCAGATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCTTCA
129 GCGTCTACAGCACCCTGGAGAAACACATGAAAAAGTGGCACGGCGAGCAC
130 TTGCTGACTAACGACGTCAAAATCGAGCAGGCCGAGAGGAGCTAA
131 >hg17_chr15_41486872_41487060_-
132 ATATTGCTTTAGGGGTATTTGATGTGGTGGTGACGGACCCCTCATGCCCA
133 GCCTCGGTGCTGAAGTGTGCTGAAGCATTGCAGCTGCCTGTGGTGTCACA
134 AGAGTGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGC
135 AGCATCCAAAATATAAACACGATTATGTTTCTCACTAA
136 >hg17_chr15_41673708_41673857_+
137 ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCT
138 CCTGGCTTTGGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGAC
139 CGGAACCTGTACGAGCTGCCAGTGAACGACGGAGGCTGTATCCCCCGAG
140 >hg17_chr15_41679161_41679250_-
141 GTCGAAGTACAGCCTGGGGCCTCCAGGACTGGTCACGACCTTCCTGGTCC
142 CTGGTATTGACTATCAGCTTCCTTGGCCACCTGCTATGA
143 >hg17_chr15_41826029_41826196_+
144 ATGCGCCTCCGCCGCCTAGCGCTGTTCCCGGGTGTGGCGCTGCTTCTTGC
145 CGCGGCCCGCCTCGCCGCTGCCTCCGACGTGCTAGAACTCACGGACGACA
146 ACTTCGAGAGTCGCATCTCCGACACGGGCTCTGCGGGCCTCATGCTCGTC
147 GAGTTCTTCGCCCCCTG
148 >hg17_chr16_142908_143003_+
149 ATGTCTCTGACCAAGACTGAGAGGACCATCATTGTGTCCATGTGGGCCAA
150 GATCTCCACGCAGGCCGACACCATCGGCACCGAGACTCTGGAGAG
151 >hg17_chr16_179963_180135_-
152 GTCACGCTCCCGGGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAG
153 AGCGACGGAAATTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCAC
154 CGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGA
155 CCGAAGTGCGAAATACAAGTAA
156 >hg17_chr16_244413_244681_+
157 ATGTTGGACCACAAGGACTTAGAGGCCGAAATCCACCCCTTGAAAAATGA
158 AGAAAGAAAATCGCAGGAAAATCTGGGAAATCCATCAAAAAATGAGGATA
159 ACGTGAAAAGCGCGCCTCCACAGTCCCGGCTCTCCCGGTGCCGAGCGGCG
160 GCGTTTTTTCTTTCATTGTTTCTCTGCCTTTTTGTGGTGTTCGTCGTCTC
161 ATTCGTCATCCCGTGTCCAGACCGGCCGGCGTCACAGCGAATGTGGAGGA
162 TAGACTACAGTGCCGCTG
163 >hg17_chr16_259268_259383_-
164 CGTGTTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCCAGCCCTGCAC
165 TCCTTCCCACCCCTGTGGAGCCCACAGCGGCTTGTGGCCCTGGGGGTGGA
166 GATGGGGTGGCCTAG
167 >hg17_chr18_23786114_23786321_-
168 GGCCTTAAAGCGGCTGACAATGACCCCACAGCTCCACCATATGACTCCCT
169 GTTAGTGTTTGACTATGAAGGCAGTGGCTCCACTGCTGGGTCCTTGAGCT
170 CCCTTAATTCCTCAAGTAGTGGTGGTGAGCAGGACTATGATTACCTGAAC
171 GACTGGGGGCCACGGTTCAAGAAACTTGCTGACATGTATGGTGGAGGTGA
172 TGACTGA
173 >hg17_chr18_59406881_59407046_+
174 ATGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGTTTGATCTTTTCAA
175 AGAGCTGAAGAAAACAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCA
176 TCTTGACTGCAATTGGCATGGTCCTCCTGGGGACCCGAGGAGCCACCGCT
177 TCCCAGTTGGAGGAG
178 >hg17_chr18_59455932_59456337_-
179 CTTGAAGAGAAACTCACTGCTGAGAAATTGATGGAATGGACAAGTTTGCA
180 GAATATGAGAGAGACATGTGTCGATTTACACTTACCTCGGTTCAAAATGG
181 AAGAGAGCTATGACCTCAAGGACACGTTGAGAACCATGGGAATGGTGAAT
182 ATCTTCAATGGGGATGCAGACCTCTCAGGCATGACCTGGAGCCACGGTCT
183 CTCAGTATCTAAAGTCCTACACAAGGCCTTTGTGGAGGTCACTGAGGAGG
184 GAGTGGAAGCTGCAGCTGCCACCGCTGTAGTAGTAGTCGAATTATCATCT
185 CCTTCAACTAATGAAGAGTTCTGTTGTAATCACCCTTTCCTATTCTTCAT
186 AAGGCAAAATAAGACCAACAGCATCCTCTTCTATGGCAGATTCTCATCCC
187 CATAG
188 >hg17_chr18_59600586_59600754_+
189 ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAACCTGTTCAG
190 AGAGATGGATGACAATCAAGGAAATGGAAATGTGTTCTTTTCCTCTCTGA
191 GCCTCTTCGCTGCCCTGGCCCTGGTCCGCTTGGGCGCTCAAGATGACTCC
192 CTCTCTCAGATTGATAAG
193 >hg17_chr19_59068595_59069564_+
194 ATGCCAGTGACGGTAACCCGCACCACCATCACAACCACCACGACGTCATC
195 TTCGGGCCTGGGGTCCCCCATGATCGTGGGGTCCCCTCGGGCCCTGACAC
196 AGCCCCTGGGTCTCCTTCGCCTGCTGCAGCTGGTGTCTACCTGCGTGGCC
197 TTCTCGCTGGTGGCTAGCGTGGGCGCCTGGACGGGGTCCATGGGCAACTG
198 GTCCATGTTCACCTGGTGCTTCTGCTTCTCCGTGACCCTGATCATCCTCA
199 TCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTCTTGGCGCAAC
200 TTCCCCATCACCTTCGCCTGCTATGCGGCCCTCTTCTGCCTCTCGGCCTC
201 CATCATCTACCCCACCACCTATGTCCAGTTCCTGTCCCACGGCCGTTCGC
202 GGGACCACGCCATCGCCGCCACCTTCTTCTCCTGCATCGCGTGTGTGGCT
203 TACGCCACCGAAGTGGCCTGGACCCGGGCCCGGCCCGGCGAGATCACTGG
204 CTATATGGCCACCGTACCCGGGCTGCTGAAGGTGCTGGAGACCTTCGTTG
205 CCTGCATCATCTTCGCGTTCATCAGCGACCCCAACCTGTACCAGCACCAG
206 CCGGCCCTGGAGTGGTGCGTGGCGGTGTACGCCATCTGCTTCATCCTAGC
207 GGCCATCGCCATCCTGCTGAACCTGGGGGAGTGCACCAACGTGCTACCCA
208 TCCCCTTCCCCAGCTTCCTGTCGGGGCTGGCCTTGCTGTCTGTCCTCCTC
209 TATGCCACCGCCCTTGTTCTCTGGCCCCTCTACCAGTTCGATGAGAAGTA
210 TGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGCTGCAGCCGCAGCCATG
211 CCTACTACGTGTGTGCCTGGGACCGCCGACTGGCTGTGGCCATCCTGACG
212 GCCATCAACCTACTGGCGTATGTGGCTGACCTGGTGCACTCTGCCCACCT
213 GGTTTTTGTCAAGGTCTAA
214 >hg17_chr19_59236026_59236146_-
215 ACGGCAGACCCCCAAGGAGTGACCTATGCTGAGCTAAGCACCAGCGCCCT
216 GTCTGAGGCAGCTTCAGACACCACCCAGGAGCCCCCAGGATCTCATGAAT
217 ATGCGGCACTGAAAGTGTAG
218 >hg17_chr19_59297998_59298008_+
219 ATGGCTGCGA
220 >hg17_chr19_59302168_59302288_-
221 ATTAAGGTTGAGGAAGACTTTGGCTTTGAAGCAGATGAGGCCCTGGATTC
222 CAGTTGGGTTTCTCGGGGTCCAGACAAACTGCTGCCCTACCCGACCCTGG
223 CCAGCCCAGCCTCTGACTGA
224 >hg17_chr2_118288583_118288668_+
225 ATGTCACACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGGAA
226 CCTCAAATTGCGGCAGCGGAACCTAAAGTTTCAGG
227 >hg17_chr2_118394148_118394202_-
228 GAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTC
229 CTGA
230 >hg17_chr2_220190202_220190242_+
231 ATGCTCAAAGCGGTGATCCTGATTGGAGGCCCTCAAAAGG
232 >hg17_chr2_220229609_220230869_-
233 TGGGAGATCCAGAATACCAGCCATCTGGCCGTTGATGGGGACCAGGCAGC
234 TGCTTGGCCCGTGGGTATTCCAGCACCATCCCGCCCGGCCTCCCGCTTTG
235 AGGTGCTGCGCTGGGACTACTTCACGGAGCAGCACGCTTTCTCCTGCGCC
236 GATGGCTCACCCCGCTGCCCACTGCGTGGGGCTGACCGGGCTGATGTGGC
237 CGATGTTCTGGGGACAGCTCTAGAGGAGCTGAACCGCCGCTACCACCCGG
238 CCTTGCGGCTCCAGAAGCAGCAGCTGGTGAATGGCTACCGACGCTTTGAT
239 CCGGCCCGGGGTATGGAATACACGCTGGACTTGCAGCTGGAGGCACTGAC
240 CCCCCAGGGAGGCCGCCGGCCCCTCACTCGCCGAGTGCAGCTGCTCCGGC
241 CGCTGAGCCGCGTGGAGATCTTGCCTGTGCCCTATGTCACTGAGGCCTCA
242 CGTCTCACTGTGCTGCTGCCTCTAGCTGCGGCTGAGCGTGACCTGGCCCC
243 TGGCTTCTTGGAGGCCTTTGCCACTGCAGCACTGGAGCCTGGTGATGCTG
244 CGGCAGCCCTGACCCTGCTGCTACTGTATGAGCCGCGCCAGGCCCAGCGC
245 GTGGCCCATGCAGATGTCTTCGCACCTGTCAAGGCCCACGTGGCAGAGCT
246 GGAGCGGCGTTTCCCCGGTGCCCGGGTGCCATGGCTCAGTGTGCAGACAG
247 CCGCACCCTCACCACTGCGCCTCATGGATCTACTCTCCAAGAAGCACCCG
248 CTGGACACACTGTTCCTGCTGGCCGGGCCAGACACGGTGCTCACGCCTGA
249 CTTCCTGAACCGCTGCCGCATGCATGCCATCTCCGGCTGGCAGGCCTTCT
250 TTCCCATGCATTTCCAAGCCTTCCACCCAGCTGTGGCCCCACCACAAGGG
251 CCTGGGCCCCCAGAGCTGGGCCGTGACACTGGCCGCTTTGATCGCCAGGC
252 AGCCAGCGAGGCCTGCTTCTACAACTCCGACTATGTGGCAGCCCGTGGGC
253 GCCTGGCGGCAGCCTCAGAACAAGAAGAGGAGCTGCTGGAGAGCCTGGAT
254 GTGTACGAGCTGTTCCTCCACTTCTCCAGTCTGCATGTGCTGCGGGCGGT
255 GGAGCCGGCGCTGCTGCAGCGCTACCGGGCCCAGACGTGCAGCGCGAGGC
256 TCAGTGAGGACCTGTACCACCGCTGCCTCCAGAGCGTGCTTGAGGGCCTC
257 GGCTCCCGAACCCAGCTGGCCATGCTACTCTTTGAACAGGAGCAGGGCAA
258 CAGCACCTGA
259 >hg17_chr20_33330413_33330423_-
260 CCTCACCTGA
261 >hg17_chr20_33513606_33513792_+
262 ATGGAGACAAGAAGCCCTGGGTTGAACAACATGAAGCCCCAGTCACTGCA
263 GCTGGTACTGGAAGAGCAGGTGCTGGCACTACAGCAGCAGATGGCAGAGA
264 ATCAGGCAGCCTCCTGGCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCAG
265 AGACAAGCAACCCTTGTGAGGAAGCTGCAGGCCAAG
266 >hg17_chr20_33579500_33579527_-
267 ATTTTGGAAGATGGTCTGGTTCCCTAG
268 >hg17_chr20_33593260_33593348_+
269 ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCCAAGACTTT
270 GGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACCG
271 >hg17_chr21_32707032_32707192_+
272 ATGCTTCTGCCGGGACGCGCACGCCAACCGCCGACGCCCCAGCCCGTGCA
273 GCATCCCGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCC
274 TCTTCTACTGCACTGTCCTGGTCTGCTCCAAAGAGATCTCAGCGCTCACC
275 GACTTCTCTG
276 >hg17_chr21_32869641_32870022_-
277 ATGGAGCGCCCTCTCATCTGGCACCTTCCTGGCCTCTTTCCCAGGCCCCA
278 GTTCTGTCCATGCAGCTGTGGGTGCTTCCTGCATTGCGGGTCTCACGGGG
279 AGGAGACGAGAGTGCCCCTGGTTGAGTCAGGAAAGAATTCTATCTTCACG
280 TCGCTGCCAGCAAATGACCACAGCAGCTTCACGACCTCTGCAGGAACCTA
281 TCTTGGTAAAGAAACGGGGCCTATGTGGTGGCCGAGCCTCAGGTGTGGCC
282 GAGCTTCAGGTGTGGCCCTTATGCACAGCACAGCCCAAGCCTGTGGGCAC
283 CACTCGCCCTGGGCTGCCTGGCACCTGGACTCCTTCCCATCCTTGGCCGA
284 GGTCTGCGTGGCCCTTCAGGGCCGAATCTGA
285 >hg17_chr21_33321040_33322012_+
286 ATGGACTCGGACGCCAGCCTGGTGTCCAGCCGCCCGTCGTCGCCAGAGCC
287 CGATGACCTTTTTCTGCCGGCCCGGAGTAAGGGCAGCAGCGGCAGCGCCT
288 TCACTGGGGGCACCGTGTCCTCGTCCACCCCGAGTGACTGCCCGCCGGAG
289 CTGAGCGCCGAGCTGCGCGGCGCTATGGGCTCTGCGGGCGCGCATCCTGG
290 GGACAAGCTAGGAGGCAGTGGCTTCAAGTCATCCTCGTCCAGCACCTCGT
291 CGTCTACGTCGTCGGCGGCTGCGTCGTCCACCAAGAAGGACAAGAAGCAA
292 ATGACAGAGCCGGAGCTGCAGCAGCTGCGTCTCAAGATCAACAGCCGCGA
293 GCGCAAGCGCATGCACGACCTCAACATCGCCATGGATGGCCTCCGCGAGG
294 TCATGCCGTACGCACACGGCCCTTCGGTGCGCAAGCTTTCCAAGATCGCC
295 ACGCTGCTGCTGGCGCGCAACTACATCCTCATGCTCACCAACTCGCTGGA
296 GGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGGCCACCACGCTGGCT
297 TCCACCCGTCGGCCTGCGGCGGCCTGGCGCACTCCGCGCCCCTGCCCGCC
298 GCCACCGCGCACCCGGCAGCAGCAGCGCACGCCGCACATCACCCCGCGGT
299 GCACCACCCCATCctgccgcccgccgccgcagcggctgctgccgccgctg
300 cagccgcggctgTGTCCAGCGCCTCTCTGCCCGGATCCGGGCTGCCGTCG
301 GTCGGCTCCATCCGTCCACCGCACGGCCTACTCAAGTCTCCGTCTGCTgc
302 cgcggccgccccgctggggggcgggggcggcggcAGTGGGGCGAGCGGGG
303 GCTTCCAGCACTGGGGCGGCATGCCCTGCCCCTGCAGCATGTGCCAGGTG
304 CCGCCGCCGCACCACCACGTGTCGGCTATGGGCGCCGGCAGCCTGCCGCG
305 CCTCACCTCCGACGCCAAGTGA
306 >hg17_chr21_33744994_33745040_-
307 CACTCTGATCTACAAATTTGGAAGAACCGAAGAGCTATGGACCTGA
308 >hg17_chr22_30120223_30120265_+
309 ATGAGCAGCACCTTAGCTAAGATCGCGGAGATAGAAGCAGAG
310 >hg17_chr22_30160419_30160661_-
311 TTCTGCATCCTCCAGGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTTCAG
312 ACAACCCCTCAGAACGTGCCCAGCCGGTCAGGCCTGCCCCACATGCACTC
313 CCAGCTGGAGCATCGCCCCAGCCAGAGGAGCAGCTCCCCTGTGGGCCTTG
314 CCAAATGGTTTGGCTCAGATGTGCTACAGCAACCCCTGCCCTCCATGCCC
315 GCCAAAGTTATCAGTGTAGATGAATTGGAATACCGACAGTGA
316 >hg17_chr22_30665273_30665360_+
317 ATGGGGGACCGGGAGCAGCTGCTGCAGCGGGCGCGGCTGGCCGAGCAGGC
318 GGAGCGCTACGACGACATGGCCTCCGCTATGAAGGCG
319 >hg17_chr22_30939054_30939266_-
320 ATTATCCTGAGAAATCACGTGGATGCCTCAAGAAAGCTTATGACTTGTTC
321 TGCGGTTTGCAGAAGGGACCCAAGCTAACCAAGGAGGAGGAGGAAGCCTT
322 GAGCAAGAAGCTCACAGACACGTCTGAGAGGCCCTCGTGGAGGACAATAG
323 TGAACATCAACGCCATCCTCCTCCTGGCTGTGGTGGTCTTTATTCACGGC
324 TACTATGCCTGA
325 >hg17_chr5_131424298_131424460_+
326 ATGAGCCGCCTGCCCGTCCTGCTCCTGCTCCAACTCCTGGTCCGCCCCGG
327 ACTCCAAGCTCCCATGACCCAGACAACGCCCTTGAAGACAAGCTGGGTTA
328 ACTGCTCTAACATGATCGATGAAATTATAACACACTTAAAGCAGCCACCT
329 TTGCCTTTGCTG
330 >hg17_chr5_131556601_131556672_-
331 TCTCCAATAAGTGGTTCCATGAACGAGGACAGGAGTTCTTGAGACCTTGT
332 GGATCAACAGAAGTTGACTGA
333 >hg17_chr5_131621326_131621419_+
334 ATGCCCCATTCCGTGACCCTGCGCGGGCCTTCGCCCTGGGGCTTCCGCCT
335 GGTGGGCGGCCGGGACTTCAGCGCGCCCCTCACCATCTCACGG
336 >hg17_chr5_131847541_131847666_-
337 GGGATATTGGGCTGAGTCTACAGCGTGTCTTCACAGATCTGAAGAACATG
338 GATGCCACCTGGCTGGACAGCCTGCTGACCCCAGTCCGGTTGCCCTCCAT
339 CCAGGCCATTCCCTGTGCACCGTAG
340 >hg17_chr6_108299600_108299744_-
341 TTGGAAGTTCATGAGGCTAAGCCTGTGCCAGAAAATCACCCACAGTGGGA
342 TACAGCAATAGAGGGGGATGAAGACCAGGAGGACAGTGAGGGCTTTGAAG
343 ATAGCTTTGAGGAAGAAGAGGAGGAAGAAGAAGATGATGACTAA
344 >hg17_chr6_108594662_108594687_+
345 ATGAGCAAGCCAGCCGGATCAACAA
346 >hg17_chr6_108640045_108640151_-
347 GGTCGCTGGTCATCCTCTGGCACAGAACGAACGTTGTCTTCACATGTTTT
348 TACAAGATGAAATAATAGATAAAAGCTATACTCCATCTAAAATAAGACAT
349 GCCTGA
350 >hg17_chr6_108722976_108723115_+
351 ATGGCGGCCTCCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAGAG
352 CCCGCTGAGAGGGAGATGTGTTGGGTGCGGGGCCTGGGCCGCCGCTCTCG
353 CTCCTCTGGCCACCGCCCCTGGGAAGCCCTTTTGGAAAG
354 >hg17_chr7_113660517_113660685_+
355 ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCA
356 AAATGGAATGAGCACTCTAAGCAGCCAATTAGATGCTGGCAGCAGAGATG
357 GAAGATCAAGTGGTGACACCAGCTCTGAAGTAAGCACAGTAGAACTGCTG
358 CATCTGCAACAACAGCAG
359 >hg17_chr7_116512159_116512389_-
360 GCTCCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATG
361 GACAGCTGTGAAGTCATGTGCTGTGGGAGAGGCTACGACACCTCCCATGT
362 CACCCGGATGACCAAGTGTGGGTGTAAGTTCCACTGGTGCTGCGCCGTGC
363 GCTGTCAGGACTGCCTGGAAGCTCTGGATGTGCACACATGCAAGGCCCCC
364 AAGAACGCTGACTGGACAACCGCTACATGA
365 >hg17_chr7_116714099_116714152_+
366 ATGCAGAGGTCGCCTCTGGAAAAGGCCAGCGTTGTCTCCAAACTTTTTTT
367 CAG
368 >hg17_chr7_116945541_116945787_-
369 GAGGTCAGTCCTCTCAGCAGCCATCAAACTACTGAATGCAGCAACAGTAA
370 ATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCCTGTTC
371 CTAGAAGTAAAGTCACCCAGTGTTCCCAGAACACCAAAAGAAGCAGCAGC
372 AGCAGTAATACAAGGCAAATAGAAATCAACAACAACTCAAAAGAAGTGAA
373 TTGGAACTTACACAAAAATGAACACCTAGAAAAACCTAACAAATAG
374 >hg17_chr8_118881131_118881317_-
375 ACTTCTCGGGCTTCCCGTTGGGCTGACCCTGACCACTTTGCCCAGCGACA
376 GAGCTGCATGAATACGTTTGCCAGCTGGTTTGGCTACATGCCGCTGATCC
377 ACTCTCAGATGAGGCTCGACCCCGTCCTCTTTAAAGACCAGGTCTCTATT
378 TTGAGGAAGAAATACCGAGACATTGAGCGACTTTGA
379 >hg17_chr9_128764156_128764189_+
380 ATGGCCTGCCTGAGCCCCTCGCAGCTCCAGAAG
381 >hg17_chr9_128787519_128789136_-
382 ATGACCCGAGAGTGCCCATCTCCGGCCCCGGGGCCTGGGGCTCCGCTGAG
383 TGGATCGGTGCTGGCAGAGGCGGCAGTAGTGTTTGCAGTGGTGCTGAGCA
384 TCCACGCAACCGTATGGGACCGATACTCGTGGTGCGCCGTGGCCCTCGCA
385 GTGCAGGCCTTCTACGTCCAATACAAGTGGGACCGGCTGCTACAGCAGGG
386 AAGCGCCGTCTTCCAGTTCCGAATGTCCGCAAACAGTGGCCTATTGCCCG
387 CCTCCATGGTCATGCCTTTGCTTGGACTAGTCATGAAGGAGCGGTGCCAG
388 ACTGCTGGGAACCCGTTCTTTGAGCGTTTTGGCATTGTGGTGGCAGCCAC
389 TGGCATGGCAGTGGCCCTCTTCTCATCAGTGTTGGCGCTCGGCATCACTC
390 GCCCAGTGCCAACCAACACTTGTGTCATCTTGGGCTTGGCTGGAGGTGTT
391 ATCATTTATATCATGAAGCACTCGTTGAGCGTGGGGGAGGTGATCGAAGT
392 CCTGGAAGTCCTTCTGATCTTCGTTTATCTCAACATGATCCTGCTGTACC
393 TGCTGCCCCGCTGCTTCACCCCTGGTGAGGCACTGCTGGTATTGGGTGGC
394 ATTAGCTTTGTCCTCAACCAGCTCATCAAGCGCTCTCTGACACTGGTGGA
395 AAGTCAGGGGGACCCAGTGGACTTCTTCCTGCTGGTGGTGGTAGTAGGGA
396 TGGTACTCATGGGCATTTTCTTCAGCACTCTGTTTGTCTTCATGGACTCA
397 GGCACCTGGGCCTCCTCCATCTTCTTCCACCTCATGACCTGTGTGCTGAG
398 CCTTGGTGTGGTCCTACCCTGGCTGCACCGGCTCATCCGCAGGAATCCCC
399 TGCTCTGGCTTCTTCAGTTTCTCTTCCAGACAGACACCCGCATCTACCTC
400 CTAGCCTATTGGTCTCTGCTGGCCACCTTGGCCTGCCTGGTGGTGCTGTA
401 CCAGAATGCCAAGCGGTCATCTTCCGAGTCCAAGAAGCACCAGGCCCCCA
402 CCATCGCCCGAAAGTATTTCCACCTCATTGTGGTAGCCACCTACATCCCA
403 GGTATCATCTTTGACCGGCCACTGCTCTATGTAGCCGCCACTGTATGCCT
404 GGCGGTCTTCATCTTCCTGGAGTATGTGCGCTACTTCCGCATCAAGCCTT
405 TGGGTCACACTCTACGGAGCTTCCTGTCCCTTTTTCTGGATGAACGAGAC
406 AGTGGACCACTCATTCTGACACACATCTACCTGCTCCTGGGCATGTCTCT
407 TCCCATCTGGCTGATCCCCAGACCCTGCACACAGAAGGGTAGCCTGGGAG
408 GAGCCAGGGCCCTCGTCCCCTATGCCGGTGTCCTGGCTGTGGGTGTGGGT
409 GATACTGTGGCCTCCATCTTCGGTAGCACCATGGGGGAGATCCGCTGGCC
410 TGGAACCAAAAAGACTTTTGAGGGGACCATGACATCTATATTTGCGCAGA
411 TCATTTCTGTAGCTCTGATCTTAATCTTTGACAGTGGAGTGGACCTAAAC
412 TACAGTTATGCTTGGATTTTGGGGTCCATCAGCACTGTGTCCCTCCTGGA
413 AGCATACACTACACAGATAGACAATCTCCTTCTGCCTCTCTACCTCCTGA
414 TATTGCTGATGGCCTAG
415 >hg17_chr9_128882427_128882523_+
416 ATGGCGTTCCGGAGGGCCGAGGGCACGTCTATGATCCAGGCCCTGGCCAT
417 GACGGTGGCCGAGATCCCCGTGTTCCTGTACACGACGTTTGGGCAG
418 >hg17_chr9_128937229_128937445_-
419 GTCCCTGCCAAGACAGACTGTGTCATGTTCTTCGGGCCCGTGGTCCCCGA
420 CGGCTACGGTGTCTGCTATAACCCCATGGAGGCCCACATCAACTTCTCCC
421 TGTCGGCCTACAACAGCTGCGCGGAGACCAACGCCGCCCGCCTGGCGCAT
422 TACCTGGAGAAGGCGCTCCTGGACATGCGTGCCCTGCTGCAGAGCCACCC
423 CCGGGCCAAGCTCTGA
424 >hg17_chrX_122745047_122745924_+
425 ATGACTTTTAACAGTTTTGAAGGATCTAAAACTTGTGTACCTGCAGACAT
426 CAATAAGGAAGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACTTTTG
427 CTAATTTTCCAAGTGGTAGTCCTGTTTCAGCATCAACACTGGCACGAGCA
428 GGGTTTCTTTATACTGGTGAAGGAGATACCGTGCGGTGCTTTAGTTGTCA
429 TGCAGCTGTAGATAGATGGCAATATGGAGACTCAGCAGTTGGAAGACACA
430 GGAAAGTATCCCCAAATTGCAGATTTATCAACGGCTTTTATCTTGAAAAT
431 AGTGCCACGCAGTCTACAAATTCTGGTATCCAGAATGGTCAGTACAAAGT
432 TGAAAACTATCTGGGAAGCAGAGATCATTTTGCCTTAGACAGGCCATCTG
433 AGACACATGCAGACTATCTTTTGAGAACTGGGCAGGTTGTAGATATATCA
434 GACACCATATACCCGAGGAACCCTGCCATGTATAGTGAAGAAGCTAGATT
435 AAAGTCCTTTCAGAACTGGCCAGACTATGCTCACCTAACCCCAAGAGAGT
436 TAGCAAGTGCTGGACTCTACTACACAGGTATTGGTGACCAAGTGCAGTGC
437 TTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCTTGTGATCGTGCCTG
438 GTCAGAACACAGGCGACACTTTCCTAATTGCTTCTTTGTTTTGGGCCGGA
439 ATCTTAATATTCGAAGTGAATCTGATGCTGTGAGTTCTGATAGGAATTTC
440 CCAAATTCAACAAATCTTCCAAGAAATCCATCCATGGCAGATTATGAAGC
441 ACGGATCTTTACTTTTGGGACATGGATATACTCAGTTAACAAGGAGCAGC
442 TTGCAAGAGCTGGATTTTATGCTTTAG
443 >hg17_chrX_152648964_152649196_-
444 TGACAACGAGGAGAAGGCCTTTGGCAGCAGCCAGCCATCGCTCAACGGGG
445 ACATCAAGCCCCTGGGCAGTGACGACAGCCTGGCCGATTATGGGGGCAGC
446 GTGGATGTTCAGTTCAACGAGGATGGTTCGTTCATTGGCCAGTACAGTGG
447 CAAGAAGGAGAAGGAGGCGGCAGGGGGCAATGACAGCTCAGGGGCCACTT
448 CCCCCATCAACCCTGCCGTGGCCCTAGAATAG
449 >hg17_chrX_152691446_152691471_+
450 ATGCTCATGGCGTCCACCACTTCCG
451 >hg17_chrX_152694029_152694263_-
452 GCTGTGGCACAGAACATGGACTCTGTGTTTAAGGAGCTCTTGGGAAAGAC
453 CTCTGTCCGCCAGGGCCTTGGGCCAGCATCTACCACCTCTCCCAGTCCTG
454 GGCCCCGAAGCCCAAAGGCCCCGCCCAGCAGCCGCCTGGGCAGGAACAAA
455 GGCTTCTCCCGGGGCCCTGGGGCCCCAGCCTCACCCTCAGCTTCCCACCC
456 CCAGGGCCTAGACACGACCCCCAAGCCACACTGA