--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/rnaseq/cutadapt/test-data/extract_genomic_dna_out1.fasta	Sat Feb 21 16:33:42 2015 +0100
@@ -0,0 +1,456 @@
+>hg17_chr1_147962192_147962580_-
+ACTTGATCCTGCTCCCTCGGTGTCTGCATTGACTCCTCATGCTGGGACTG
+GACCCGTCAACCCCCCTGCTCGCTGCTCACGTACCTTCATCACTTTTAGT
+GATGATGCAACTTTCGAGGAATGGTTCCCCCAAGGGCGGCCCCCAAAAGT
+CCCTGTTCGTGAGGTCTGTCCAGTGACCCATCGTCCAGCCCTATACCGGG
+ACCCTGTTACAGACATACCCTATGCCACTGCTCGAGCCTTCAAGATCATT
+CGTGAGGCTTACAAGAAGTACATTACTGCCCATGGACTGCCGCCCACTGC
+CTCAGCCCTGGGCCCCGGCCCGCCACCTCCTGAGCCCCTCCCTGGCTCTG
+GGCCCCGAGCCTTGCGCCAGAAAATTGTCATTAAATGA
+>hg17_chr1_147984545_147984630_+
+ATGGCGTCGGCCTCCTCCGGGCCGTCGTCTTCGGTCGGTTTTTCATCCTT
+TGATCCCGCGGTCCCTTCCTGTACCTTGTCCTCAG
+>hg17_chr1_148078400_148078582_-
+GTTCTCAGCTTCCTTGCTTCCATGGCTCCAGCACCATTCGAAACCTCAAA
+GAGAGGTTCCACATGAGCATGACTGAGGAGCAGCTGCAGCTGCTGGTGGA
+GCAGATGGTGGATGGCAGTATGCGGTCTATCACCACCAAACTCTATGACG
+GCTTCCAGTACCTCACCAACGGCATCATGTGA
+>hg17_chr1_148185136_148185276_+
+ATGGAAGCGTTTTTGGGGTCGCGGTCCGGACTTTGGGCGGGGGGTCCGGC
+CCCAGGACAGTTTTACCGCATTCCGTCCACTCCCGATTCCTTCATGGATC
+CGGCGTCTGCACTTTACAGAGGTCCAATCACGCGGACCCA
+>hg17_chr10_55251623_55253124_-
+TCTTTTCCTTCTCTACCATTTTCAACAAAGCAGGGGAAATAACTCAGTCT
+CAGAAGACAGGAAACATCAACAAGTTGTGATGCCCTTTTCTTCCAATACT
+ATTGAGGCTCACAAGTCAGCTCATGTAGACGGATCACTTAAGAGCAACAA
+ACTGAAGTCTGCAAGAAAATTCACATTTCTATCTGATGAGGATGACTTAA
+GTGCCCATAATCCCCTTTATAAGGAAAACATAAGTCAAGTATCAACAAAT
+TCAGACATTTCACAGAGAACAGATTTTGTAGACCCATTTTCACCCAAAAT
+ACAAGCCAAGAGTAAGTCTCTGAGGGGCCCAAGAGAAAAGATTCAGAGGC
+TGTGGAGTCAGTCAGTCAGCTTACCCAGGAGGCTGATGAGGAAAGTTCCA
+AATAGACCAGAGATCATAGATCTGCAGCAGTGGCAAGGCACCAGGCAGAA
+AGCTGAAAATGAAAACACTGGAATCTGTACAAACAAAAGAGGTAGCAGCA
+ATCCATTGCTTACAACTGAAGAGGCAAATTTGACAGAGAAAGAGGAAATA
+AGGCAAGGTGAAACACTGATGATAGAAGGAACAGAACAGTTGAAATCTCT
+CTCTTCAGACTCTTCATTTTGCTTTCCCAGGCCTCACTTCTCATTCTCCA
+CTTTGCCAACTGTTTCAAGAACTGTGGAACTCAAATCAGAACCTAATGTC
+ATCAGTTCTCCTGCTGAGTGTTCCTTGGAACTTTCTCCTTCAAGGCCTTG
+TGTTTTACATTCTTCACTCTCTAGGAGAGAGACACCTATTTGTATGTTAC
+CTATTGAAACCGAAAGAAATATTTTTGAAAATTTTGCCCATCCACCAAAC
+ATCTCTCCTTCTGCCTGtccccttccccctcctcctcctatttctcctcc
+ttctcctcctcctgctcctgctcctcttgctcctcctcctgacatttctc
+ctttttctcttttttgtcctcctccctctcctccttctatccctcttcct
+cttcctcctcctACATTTTTTCCACTTTCCGTTTCAACGTCTGGTCCCCC
+AACAccacctcttctacctccatttccaactcctcttcctccaccacctc
+cttctattccttgccctccacctccttcAGCTTCATTTCTGTCCACAGAG
+TGTGTCTGTATAACAGGTGTTAAATGCACGACCAACTTGATGCCTGCCGA
+GAAAATTAAGTCCTCTATGACACAGCTATCAACAACGACAGTGTGTAAAA
+CAGACCCTCAGAGAGAACCAAAAGGCATCCTCAGACACGTTAAAAACTTA
+GCAGAACTTGAAAAATCAGTAGCTAACATGTACAGTCAAATAGAAAAAAA
+CTATCTACGCACAAATGTTTCAGAACTTCAAACTATGTGCCCTTCAGAAG
+TAACAAATATGGAAATCACATCTGAACAAAACAAGGGGAGTTTGAACAAT
+ATTGTCGAGGGAACTGAAAAACAATCTCACAGTCAATCTACTTCACTGTA
+A
+>hg17_chr11_116124407_116124501_-
+ATCCAATGGATTTGAACAGAAGCGCTTTGCCAGGCTTGCCAGCAAGAAGG
+CAGTGGAGGAACTTGCCTACAAATGGAGTGTTGAGGATATGTAA
+>hg17_chr11_116206508_116206563_+
+ATGCAGCCCCGGGTACTCCTTGTTGTTGCCCTCCTGGCGCTCCTGGCCTC
+TGCCC
+>hg17_chr11_116211733_116212337_-
+CCTAAAGCTCCTTGACAACTGGGACAGCGTGACCTCCACCTTCAGCAAGC
+TGCGCGAACAGCTCGGCCCTGTGACCCAGGAGTTCTGGGATAACCTGGAA
+AAGGAGACAGAGGGCCTGAGGCAGGAGATGAGCAAGGATCTGGAGGAGGT
+GAAGGCCAAGGTGCAGCCCTACCTGGACGACTTCCAGAAGAAGTGGCAGG
+AGGAGATGGAGCTCTACCGCCAGAAGGTGGAGCCGCTGCGCGCAGAGCTC
+CAAGAGGGCGCGCGCCAGAAGCTGCACGAGCTGCAAGAGAAGCTGAGCCC
+ACTGGGCGAGGAGATGCGCGACCGCGCGCGCGCCCATGTGGACGCGCTGC
+GCACGCATCTGGCCCCCTACAGCGACGAGCTGCGCCAGCGCTTGGCCGCG
+CGCCTTGAGGCTCTCAAGGAGAACGGCGGCGCCAGACTGGCCGAGTACCA
+CGCCAAGGCCACCGAGCATCTGAGCACGCTCAGCGAGAAGGCCAAGCCCG
+CGCTCGAGGACCTCCGCCAAGGCCTGCTGCCCGTGCTGGAGAGCTTCAAG
+GTCAGCTTCCTGAGCGCTCTCGAGGAGTACACTAAGAAGCTCAACACCCA
+GTGA
+>hg17_chr11_1812377_1812407_+
+ATGCTCCACCTGCATGGCTGGCAAACCATG
+>hg17_chr12_38440094_38440321_-
+GAGCTTTCTTCCTCTATGCTGGATTTGCTGCTGTGGGACTCCTTTTCATC
+TATGGCTGTCTTCCTGAGACCAAAGGCAAAAAATTAGAGGAAATTGAATC
+ACTCTTTGACAACAGGCTATGTACATGTGGCACTTCAGATTCTGATGAAG
+GGAGATATATTGAATATATTCGGGTAAAGGGAAGTAACTATCATCTTTCT
+GACAATGATGCTTCTGATGTGGAATAA
+>hg17_chr13_112381694_112381953_+
+ATGAACTCACCAGAGGCGAGGCTCTGCGTTGCTCAATGCAGAGACTCTTA
+CCCAGGGTGTCAGCCTCTGAAAGATACACGTGCCTGGGCCTCTTCCCTGA
+AGATGGACCCGGCAGGTCTGGAGGGAGGCCCCCGTGATGAATCCCGTGAT
+GAGCCGCCGATCCGAGCTCAGGCTGCGTCATGGGACCAGCCACAAGGTTG
+CCTGACCTATAAAGGTCGCAGGAGTGCCTCAGGGACACAGAAGCAGTTAC
+AGCTGCCAG
+>hg17_chr14_98710240_98712285_-
+GTAAAGATGAGCCTTCCAGCTACATTTGCACAACATGCAAGCAGCCCTTC
+AACAGCGCGTGGTTCCTGCTGCAGCACGCGCAGAACACGCACGGCTTCCG
+CATCTACCTGGAGCCCGGGCCGGCCAGCAGCTCGCTCACGCCGCGGCTCA
+CCATCCCGCCGCCGCTCGGGCCGGAGGCCGTGGCGCAGTCCCCGCTCATG
+AATTTCCTGGGCGACAGCAACCCCTTCAACCTGCTGCGCATGACGGGCCC
+CATCCTGCGGGACCACCCGGGCTTCGGCGAGGGCCGCCTGCCGGGCACGC
+CGCCTCTCTTCAGTCCCCCGCCGCGCCACCACCTGGACCCGCACCGCCTC
+AGTGCCGAGGAGATGGGGCTCGTCGCCCAGCACCCCAGTGCCTTCGACCG
+AGTCATGCGCCTGAACCCCATGGCCATCGACTCGCCCGCCATGGACTTCT
+CGCGGCGGCTCCGCGAGCTGGCGGGCAACAGCTCCACGCCGCCGCCCGTG
+TCCCCGGGCCGCGGCAACCCTATGCACCGGCTCCTGAACCCCTTCCAGCC
+CAGCCCCAAGTCCCCGTTCCTGAGCACGCCGCCGCTGCCGCCCATGCCCC
+CTGGCGGCACGCCGCCCCCGCAGCCGCCAGCCAAGAGCAAGTCGTGCGAG
+TTCTGCGGCAAGACCTTCAAGTTCCAGAGCAATCTCATCGTGCACCGGCG
+CAGTCACACGGGCGAGAAGCCCTACAAGTGCCAGCTGTGCGACCACGCGT
+GCTCGCAGGCCAGCAAGCTCAAGCGCCACATGAAGACGCACATGCACAAG
+GCCGGCTCGCTGGCCGGCCGCTCCGACGACGGGCTCTCGGCCGCCAGCTC
+CCCCGAGCCCGGCACCAGCGAGCTGGCGGGCGAGGGCCTCAAGGCGGCCG
+ACGGTGACTTCCGCCACCACGAGAGCGACCCGTCGCTGGGCCACGAGCCg
+gaggaggaggacgaggaggaggaggaggaggaggaggagCTGCTACTGGA
+GAACGAGAGCCGGCCCGAGTCGAGCTTCAGCATGGACTCGGAGCTGAGCC
+GCAACCGCGAGAACGGCGGTGGTGGGGTgcccggggtcccgggcgcgggg
+ggcggcgcggccAAGGCGCTGGCTGACGAGAAGGCGCTGGTGCTGGGCAA
+GGTCATGGAGAACGTGGGCCTAGGCGCACTGCCGCAGTACGGCGAGCTCC
+TGGCCGACAAGCAGAAGCGCGGCGCCTTCCTGAAGCGTGCggcgggcggc
+ggggacgcgggcgacgacgacgacgcgggcggctgcggggacgcgggcgc
+gggcggcgcggtcaacgggcgcgggggcggCTTCGCGCCAGGCACCGAGC
+CCTTCCCCGGGCTCTTCCCGCGCAAGCCCGCGCCGCTGCCCAGCCCCGGG
+CTCAACAGCGCCGCCAAGCGCATCAAGGTGGAGAAGGACCTGGAGCTGCC
+GCCCGCCGCGCTCATCCCGTCCGAGAACGTGTACTCGCAGTGGCTGGTGG
+GCTACGCGGCGTCGCGGCACTTCATGAAGGACCCCTTCCTGGGCTTCACG
+GACGCACGACAGTCGCCCTTCGCCACGTCGTCCGAGCACTCGTCCGAGAA
+CGGCAGCCTGCGCTTCTCCACGCCGCCCGGGGACCTGCTGGACGGCGGCC
+TCTCGGGCCGCAGCGGCACGGCCAGCGGAGGCAGCACCCCGCACCTgggc
+ggcccgggccccgggcggcccAGCTCCAAGGAGGGCCGCCGCAGCGACAC
+GTGCGAGTACTGCGGCAAGGTGTTCAAGAACTGCAGCAACTTGACGGTGC
+ACCGGCGGAGCCACACCGGCGAGCGGCCTTACAAGTGCGAGCTGTGCAAC
+TACGCGTGCGCGCAGAGCAGCAAGCTCACGCGCCACATGAAGACGCACGG
+GCAGATCGGCAAGGAGGTGTACCGCTGCGACATCTGCCAGATGCCCTTCA
+GCGTCTACAGCACCCTGGAGAAACACATGAAAAAGTGGCACGGCGAGCAC
+TTGCTGACTAACGACGTCAAAATCGAGCAGGCCGAGAGGAGCTAA
+>hg17_chr15_41486872_41487060_-
+ATATTGCTTTAGGGGTATTTGATGTGGTGGTGACGGACCCCTCATGCCCA
+GCCTCGGTGCTGAAGTGTGCTGAAGCATTGCAGCTGCCTGTGGTGTCACA
+AGAGTGGGTGATCCAGTGCCTCATTGTTGGGGAGAGAATTGGATTCAAGC
+AGCATCCAAAATATAAACACGATTATGTTTCTCACTAA
+>hg17_chr15_41673708_41673857_+
+ATGGCTGGTCCCTTCTCCCGTCTGCTGTCCGCCCGCCCGGGACTCAGGCT
+CCTGGCTTTGGCCGGAGCGGGGTCTCTAGCCGCTGGGTTTCTGCTCCGAC
+CGGAACCTGTACGAGCTGCCAGTGAACGACGGAGGCTGTATCCCCCGAG
+>hg17_chr15_41679161_41679250_-
+GTCGAAGTACAGCCTGGGGCCTCCAGGACTGGTCACGACCTTCCTGGTCC
+CTGGTATTGACTATCAGCTTCCTTGGCCACCTGCTATGA
+>hg17_chr15_41826029_41826196_+
+ATGCGCCTCCGCCGCCTAGCGCTGTTCCCGGGTGTGGCGCTGCTTCTTGC
+CGCGGCCCGCCTCGCCGCTGCCTCCGACGTGCTAGAACTCACGGACGACA
+ACTTCGAGAGTCGCATCTCCGACACGGGCTCTGCGGGCCTCATGCTCGTC
+GAGTTCTTCGCCCCCTG
+>hg17_chr16_142908_143003_+
+ATGTCTCTGACCAAGACTGAGAGGACCATCATTGTGTCCATGTGGGCCAA
+GATCTCCACGCAGGCCGACACCATCGGCACCGAGACTCTGGAGAG
+>hg17_chr16_179963_180135_-
+GTCACGCTCCCGGGATCGGCGTCGGAGGCGGTCAAGATCTACCTCCCGAG
+AGCGACGGAAATTGTCCCGGTCCCGGTCCCGAGATAGACATCGGCGCCAC
+CGCAGCCGTTCCCGGAGCCACAGCCGGGGACATCGTCGGGCTTCCCGGGA
+CCGAAGTGCGAAATACAAGTAA
+>hg17_chr16_244413_244681_+
+ATGTTGGACCACAAGGACTTAGAGGCCGAAATCCACCCCTTGAAAAATGA
+AGAAAGAAAATCGCAGGAAAATCTGGGAAATCCATCAAAAAATGAGGATA
+ACGTGAAAAGCGCGCCTCCACAGTCCCGGCTCTCCCGGTGCCGAGCGGCG
+GCGTTTTTTCTTTCATTGTTTCTCTGCCTTTTTGTGGTGTTCGTCGTCTC
+ATTCGTCATCCCGTGTCCAGACCGGCCGGCGTCACAGCGAATGTGGAGGA
+TAGACTACAGTGCCGCTG
+>hg17_chr16_259268_259383_-
+CGTGTTCCCGTTTACGTGGAGGCCACGGCACTCGAGCCCCAGCCCTGCAC
+TCCTTCCCACCCCTGTGGAGCCCACAGCGGCTTGTGGCCCTGGGGGTGGA
+GATGGGGTGGCCTAG
+>hg17_chr18_23786114_23786321_-
+GGCCTTAAAGCGGCTGACAATGACCCCACAGCTCCACCATATGACTCCCT
+GTTAGTGTTTGACTATGAAGGCAGTGGCTCCACTGCTGGGTCCTTGAGCT
+CCCTTAATTCCTCAAGTAGTGGTGGTGAGCAGGACTATGATTACCTGAAC
+GACTGGGGGCCACGGTTCAAGAAACTTGCTGACATGTATGGTGGAGGTGA
+TGACTGA
+>hg17_chr18_59406881_59407046_+
+ATGGATTCACTTGGCGCCGTCAGCACTCGACTTGGGTTTGATCTTTTCAA
+AGAGCTGAAGAAAACAAATGATGGCAACATCTTCTTTTCCCCTGTGGGCA
+TCTTGACTGCAATTGGCATGGTCCTCCTGGGGACCCGAGGAGCCACCGCT
+TCCCAGTTGGAGGAG
+>hg17_chr18_59455932_59456337_-
+CTTGAAGAGAAACTCACTGCTGAGAAATTGATGGAATGGACAAGTTTGCA
+GAATATGAGAGAGACATGTGTCGATTTACACTTACCTCGGTTCAAAATGG
+AAGAGAGCTATGACCTCAAGGACACGTTGAGAACCATGGGAATGGTGAAT
+ATCTTCAATGGGGATGCAGACCTCTCAGGCATGACCTGGAGCCACGGTCT
+CTCAGTATCTAAAGTCCTACACAAGGCCTTTGTGGAGGTCACTGAGGAGG
+GAGTGGAAGCTGCAGCTGCCACCGCTGTAGTAGTAGTCGAATTATCATCT
+CCTTCAACTAATGAAGAGTTCTGTTGTAATCACCCTTTCCTATTCTTCAT
+AAGGCAAAATAAGACCAACAGCATCCTCTTCTATGGCAGATTCTCATCCC
+CATAG
+>hg17_chr18_59600586_59600754_+
+ATGGCCTCCCTTGCTGCAGCAAATGCAGAGTTTTGCTTCAACCTGTTCAG
+AGAGATGGATGACAATCAAGGAAATGGAAATGTGTTCTTTTCCTCTCTGA
+GCCTCTTCGCTGCCCTGGCCCTGGTCCGCTTGGGCGCTCAAGATGACTCC
+CTCTCTCAGATTGATAAG
+>hg17_chr19_59068595_59069564_+
+ATGCCAGTGACGGTAACCCGCACCACCATCACAACCACCACGACGTCATC
+TTCGGGCCTGGGGTCCCCCATGATCGTGGGGTCCCCTCGGGCCCTGACAC
+AGCCCCTGGGTCTCCTTCGCCTGCTGCAGCTGGTGTCTACCTGCGTGGCC
+TTCTCGCTGGTGGCTAGCGTGGGCGCCTGGACGGGGTCCATGGGCAACTG
+GTCCATGTTCACCTGGTGCTTCTGCTTCTCCGTGACCCTGATCATCCTCA
+TCGTGGAGCTGTGCGGGCTCCAGGCCCGCTTCCCCCTGTCTTGGCGCAAC
+TTCCCCATCACCTTCGCCTGCTATGCGGCCCTCTTCTGCCTCTCGGCCTC
+CATCATCTACCCCACCACCTATGTCCAGTTCCTGTCCCACGGCCGTTCGC
+GGGACCACGCCATCGCCGCCACCTTCTTCTCCTGCATCGCGTGTGTGGCT
+TACGCCACCGAAGTGGCCTGGACCCGGGCCCGGCCCGGCGAGATCACTGG
+CTATATGGCCACCGTACCCGGGCTGCTGAAGGTGCTGGAGACCTTCGTTG
+CCTGCATCATCTTCGCGTTCATCAGCGACCCCAACCTGTACCAGCACCAG
+CCGGCCCTGGAGTGGTGCGTGGCGGTGTACGCCATCTGCTTCATCCTAGC
+GGCCATCGCCATCCTGCTGAACCTGGGGGAGTGCACCAACGTGCTACCCA
+TCCCCTTCCCCAGCTTCCTGTCGGGGCTGGCCTTGCTGTCTGTCCTCCTC
+TATGCCACCGCCCTTGTTCTCTGGCCCCTCTACCAGTTCGATGAGAAGTA
+TGGCGGCCAGCCTCGGCGCTCGAGAGATGTAAGCTGCAGCCGCAGCCATG
+CCTACTACGTGTGTGCCTGGGACCGCCGACTGGCTGTGGCCATCCTGACG
+GCCATCAACCTACTGGCGTATGTGGCTGACCTGGTGCACTCTGCCCACCT
+GGTTTTTGTCAAGGTCTAA
+>hg17_chr19_59236026_59236146_-
+ACGGCAGACCCCCAAGGAGTGACCTATGCTGAGCTAAGCACCAGCGCCCT
+GTCTGAGGCAGCTTCAGACACCACCCAGGAGCCCCCAGGATCTCATGAAT
+ATGCGGCACTGAAAGTGTAG
+>hg17_chr19_59297998_59298008_+
+ATGGCTGCGA
+>hg17_chr19_59302168_59302288_-
+ATTAAGGTTGAGGAAGACTTTGGCTTTGAAGCAGATGAGGCCCTGGATTC
+CAGTTGGGTTTCTCGGGGTCCAGACAAACTGCTGCCCTACCCGACCCTGG
+CCAGCCCAGCCTCTGACTGA
+>hg17_chr2_118288583_118288668_+
+ATGTCACACCTGCCGATGAAACTCCTGCGTAAGAAGATCGAGAAGCGGAA
+CCTCAAATTGCGGCAGCGGAACCTAAAGTTTCAGG
+>hg17_chr2_118394148_118394202_-
+GAGGGCCGCAAGAACGAGATGCTGCTGTCCAAGGTGAAAGCGAAGGCCTC
+CTGA
+>hg17_chr2_220190202_220190242_+
+ATGCTCAAAGCGGTGATCCTGATTGGAGGCCCTCAAAAGG
+>hg17_chr2_220229609_220230869_-
+TGGGAGATCCAGAATACCAGCCATCTGGCCGTTGATGGGGACCAGGCAGC
+TGCTTGGCCCGTGGGTATTCCAGCACCATCCCGCCCGGCCTCCCGCTTTG
+AGGTGCTGCGCTGGGACTACTTCACGGAGCAGCACGCTTTCTCCTGCGCC
+GATGGCTCACCCCGCTGCCCACTGCGTGGGGCTGACCGGGCTGATGTGGC
+CGATGTTCTGGGGACAGCTCTAGAGGAGCTGAACCGCCGCTACCACCCGG
+CCTTGCGGCTCCAGAAGCAGCAGCTGGTGAATGGCTACCGACGCTTTGAT
+CCGGCCCGGGGTATGGAATACACGCTGGACTTGCAGCTGGAGGCACTGAC
+CCCCCAGGGAGGCCGCCGGCCCCTCACTCGCCGAGTGCAGCTGCTCCGGC
+CGCTGAGCCGCGTGGAGATCTTGCCTGTGCCCTATGTCACTGAGGCCTCA
+CGTCTCACTGTGCTGCTGCCTCTAGCTGCGGCTGAGCGTGACCTGGCCCC
+TGGCTTCTTGGAGGCCTTTGCCACTGCAGCACTGGAGCCTGGTGATGCTG
+CGGCAGCCCTGACCCTGCTGCTACTGTATGAGCCGCGCCAGGCCCAGCGC
+GTGGCCCATGCAGATGTCTTCGCACCTGTCAAGGCCCACGTGGCAGAGCT
+GGAGCGGCGTTTCCCCGGTGCCCGGGTGCCATGGCTCAGTGTGCAGACAG
+CCGCACCCTCACCACTGCGCCTCATGGATCTACTCTCCAAGAAGCACCCG
+CTGGACACACTGTTCCTGCTGGCCGGGCCAGACACGGTGCTCACGCCTGA
+CTTCCTGAACCGCTGCCGCATGCATGCCATCTCCGGCTGGCAGGCCTTCT
+TTCCCATGCATTTCCAAGCCTTCCACCCAGCTGTGGCCCCACCACAAGGG
+CCTGGGCCCCCAGAGCTGGGCCGTGACACTGGCCGCTTTGATCGCCAGGC
+AGCCAGCGAGGCCTGCTTCTACAACTCCGACTATGTGGCAGCCCGTGGGC
+GCCTGGCGGCAGCCTCAGAACAAGAAGAGGAGCTGCTGGAGAGCCTGGAT
+GTGTACGAGCTGTTCCTCCACTTCTCCAGTCTGCATGTGCTGCGGGCGGT
+GGAGCCGGCGCTGCTGCAGCGCTACCGGGCCCAGACGTGCAGCGCGAGGC
+TCAGTGAGGACCTGTACCACCGCTGCCTCCAGAGCGTGCTTGAGGGCCTC
+GGCTCCCGAACCCAGCTGGCCATGCTACTCTTTGAACAGGAGCAGGGCAA
+CAGCACCTGA
+>hg17_chr20_33330413_33330423_-
+CCTCACCTGA
+>hg17_chr20_33513606_33513792_+
+ATGGAGACAAGAAGCCCTGGGTTGAACAACATGAAGCCCCAGTCACTGCA
+GCTGGTACTGGAAGAGCAGGTGCTGGCACTACAGCAGCAGATGGCAGAGA
+ATCAGGCAGCCTCCTGGCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCAG
+AGACAAGCAACCCTTGTGAGGAAGCTGCAGGCCAAG
+>hg17_chr20_33579500_33579527_-
+ATTTTGGAAGATGGTCTGGTTCCCTAG
+>hg17_chr20_33593260_33593348_+
+ATGGAGGCGCTGGGGAAGCTGAAGCAGTTCGATGCCTACCCCAAGACTTT
+GGAGGACTTCCGGGTCAAGACCTGCGGGGGCGCCACCG
+>hg17_chr21_32707032_32707192_+
+ATGCTTCTGCCGGGACGCGCACGCCAACCGCCGACGCCCCAGCCCGTGCA
+GCATCCCGGCCTCCGCCGGCAGGTAGAGCCGCCGGGGCAGCTCCTGCGCC
+TCTTCTACTGCACTGTCCTGGTCTGCTCCAAAGAGATCTCAGCGCTCACC
+GACTTCTCTG
+>hg17_chr21_32869641_32870022_-
+ATGGAGCGCCCTCTCATCTGGCACCTTCCTGGCCTCTTTCCCAGGCCCCA
+GTTCTGTCCATGCAGCTGTGGGTGCTTCCTGCATTGCGGGTCTCACGGGG
+AGGAGACGAGAGTGCCCCTGGTTGAGTCAGGAAAGAATTCTATCTTCACG
+TCGCTGCCAGCAAATGACCACAGCAGCTTCACGACCTCTGCAGGAACCTA
+TCTTGGTAAAGAAACGGGGCCTATGTGGTGGCCGAGCCTCAGGTGTGGCC
+GAGCTTCAGGTGTGGCCCTTATGCACAGCACAGCCCAAGCCTGTGGGCAC
+CACTCGCCCTGGGCTGCCTGGCACCTGGACTCCTTCCCATCCTTGGCCGA
+GGTCTGCGTGGCCCTTCAGGGCCGAATCTGA
+>hg17_chr21_33321040_33322012_+
+ATGGACTCGGACGCCAGCCTGGTGTCCAGCCGCCCGTCGTCGCCAGAGCC
+CGATGACCTTTTTCTGCCGGCCCGGAGTAAGGGCAGCAGCGGCAGCGCCT
+TCACTGGGGGCACCGTGTCCTCGTCCACCCCGAGTGACTGCCCGCCGGAG
+CTGAGCGCCGAGCTGCGCGGCGCTATGGGCTCTGCGGGCGCGCATCCTGG
+GGACAAGCTAGGAGGCAGTGGCTTCAAGTCATCCTCGTCCAGCACCTCGT
+CGTCTACGTCGTCGGCGGCTGCGTCGTCCACCAAGAAGGACAAGAAGCAA
+ATGACAGAGCCGGAGCTGCAGCAGCTGCGTCTCAAGATCAACAGCCGCGA
+GCGCAAGCGCATGCACGACCTCAACATCGCCATGGATGGCCTCCGCGAGG
+TCATGCCGTACGCACACGGCCCTTCGGTGCGCAAGCTTTCCAAGATCGCC
+ACGCTGCTGCTGGCGCGCAACTACATCCTCATGCTCACCAACTCGCTGGA
+GGAGATGAAGCGACTGGTGAGCGAGATCTACGGGGGCCACCACGCTGGCT
+TCCACCCGTCGGCCTGCGGCGGCCTGGCGCACTCCGCGCCCCTGCCCGCC
+GCCACCGCGCACCCGGCAGCAGCAGCGCACGCCGCACATCACCCCGCGGT
+GCACCACCCCATCctgccgcccgccgccgcagcggctgctgccgccgctg
+cagccgcggctgTGTCCAGCGCCTCTCTGCCCGGATCCGGGCTGCCGTCG
+GTCGGCTCCATCCGTCCACCGCACGGCCTACTCAAGTCTCCGTCTGCTgc
+cgcggccgccccgctggggggcgggggcggcggcAGTGGGGCGAGCGGGG
+GCTTCCAGCACTGGGGCGGCATGCCCTGCCCCTGCAGCATGTGCCAGGTG
+CCGCCGCCGCACCACCACGTGTCGGCTATGGGCGCCGGCAGCCTGCCGCG
+CCTCACCTCCGACGCCAAGTGA
+>hg17_chr21_33744994_33745040_-
+CACTCTGATCTACAAATTTGGAAGAACCGAAGAGCTATGGACCTGA
+>hg17_chr22_30120223_30120265_+
+ATGAGCAGCACCTTAGCTAAGATCGCGGAGATAGAAGCAGAG
+>hg17_chr22_30160419_30160661_-
+TTCTGCATCCTCCAGGCTCTGGTTCCCATGCAGCAGCTGTCAGCGTTCAG
+ACAACCCCTCAGAACGTGCCCAGCCGGTCAGGCCTGCCCCACATGCACTC
+CCAGCTGGAGCATCGCCCCAGCCAGAGGAGCAGCTCCCCTGTGGGCCTTG
+CCAAATGGTTTGGCTCAGATGTGCTACAGCAACCCCTGCCCTCCATGCCC
+GCCAAAGTTATCAGTGTAGATGAATTGGAATACCGACAGTGA
+>hg17_chr22_30665273_30665360_+
+ATGGGGGACCGGGAGCAGCTGCTGCAGCGGGCGCGGCTGGCCGAGCAGGC
+GGAGCGCTACGACGACATGGCCTCCGCTATGAAGGCG
+>hg17_chr22_30939054_30939266_-
+ATTATCCTGAGAAATCACGTGGATGCCTCAAGAAAGCTTATGACTTGTTC
+TGCGGTTTGCAGAAGGGACCCAAGCTAACCAAGGAGGAGGAGGAAGCCTT
+GAGCAAGAAGCTCACAGACACGTCTGAGAGGCCCTCGTGGAGGACAATAG
+TGAACATCAACGCCATCCTCCTCCTGGCTGTGGTGGTCTTTATTCACGGC
+TACTATGCCTGA
+>hg17_chr5_131424298_131424460_+
+ATGAGCCGCCTGCCCGTCCTGCTCCTGCTCCAACTCCTGGTCCGCCCCGG
+ACTCCAAGCTCCCATGACCCAGACAACGCCCTTGAAGACAAGCTGGGTTA
+ACTGCTCTAACATGATCGATGAAATTATAACACACTTAAAGCAGCCACCT
+TTGCCTTTGCTG
+>hg17_chr5_131556601_131556672_-
+TCTCCAATAAGTGGTTCCATGAACGAGGACAGGAGTTCTTGAGACCTTGT
+GGATCAACAGAAGTTGACTGA
+>hg17_chr5_131621326_131621419_+
+ATGCCCCATTCCGTGACCCTGCGCGGGCCTTCGCCCTGGGGCTTCCGCCT
+GGTGGGCGGCCGGGACTTCAGCGCGCCCCTCACCATCTCACGG
+>hg17_chr5_131847541_131847666_-
+GGGATATTGGGCTGAGTCTACAGCGTGTCTTCACAGATCTGAAGAACATG
+GATGCCACCTGGCTGGACAGCCTGCTGACCCCAGTCCGGTTGCCCTCCAT
+CCAGGCCATTCCCTGTGCACCGTAG
+>hg17_chr6_108299600_108299744_-
+TTGGAAGTTCATGAGGCTAAGCCTGTGCCAGAAAATCACCCACAGTGGGA
+TACAGCAATAGAGGGGGATGAAGACCAGGAGGACAGTGAGGGCTTTGAAG
+ATAGCTTTGAGGAAGAAGAGGAGGAAGAAGAAGATGATGACTAA
+>hg17_chr6_108594662_108594687_+
+ATGAGCAAGCCAGCCGGATCAACAA
+>hg17_chr6_108640045_108640151_-
+GGTCGCTGGTCATCCTCTGGCACAGAACGAACGTTGTCTTCACATGTTTT
+TACAAGATGAAATAATAGATAAAAGCTATACTCCATCTAAAATAAGACAT
+GCCTGA
+>hg17_chr6_108722976_108723115_+
+ATGGCGGCCTCCTGGTCGCTCTTGGTTACCCTGCGCCCCTTAGCACAGAG
+CCCGCTGAGAGGGAGATGTGTTGGGTGCGGGGCCTGGGCCGCCGCTCTCG
+CTCCTCTGGCCACCGCCCCTGGGAAGCCCTTTTGGAAAG
+>hg17_chr7_113660517_113660685_+
+ATGATGCAGGAATCTGCGACAGAGACAATAAGCAACAGTTCAATGAATCA
+AAATGGAATGAGCACTCTAAGCAGCCAATTAGATGCTGGCAGCAGAGATG
+GAAGATCAAGTGGTGACACCAGCTCTGAAGTAAGCACAGTAGAACTGCTG
+CATCTGCAACAACAGCAG
+>hg17_chr7_116512159_116512389_-
+GCTCCCTGGGTACAGCAGGCCGTGTGTGCAACCTGACTTCCCGGGGCATG
+GACAGCTGTGAAGTCATGTGCTGTGGGAGAGGCTACGACACCTCCCATGT
+CACCCGGATGACCAAGTGTGGGTGTAAGTTCCACTGGTGCTGCGCCGTGC
+GCTGTCAGGACTGCCTGGAAGCTCTGGATGTGCACACATGCAAGGCCCCC
+AAGAACGCTGACTGGACAACCGCTACATGA
+>hg17_chr7_116714099_116714152_+
+ATGCAGAGGTCGCCTCTGGAAAAGGCCAGCGTTGTCTCCAAACTTTTTTT
+CAG
+>hg17_chr7_116945541_116945787_-
+GAGGTCAGTCCTCTCAGCAGCCATCAAACTACTGAATGCAGCAACAGTAA
+ATCAAAGACTGAGTTGGGTGTTTCAAGAGTTAAATCTTTTCTTCCTGTTC
+CTAGAAGTAAAGTCACCCAGTGTTCCCAGAACACCAAAAGAAGCAGCAGC
+AGCAGTAATACAAGGCAAATAGAAATCAACAACAACTCAAAAGAAGTGAA
+TTGGAACTTACACAAAAATGAACACCTAGAAAAACCTAACAAATAG
+>hg17_chr8_118881131_118881317_-
+ACTTCTCGGGCTTCCCGTTGGGCTGACCCTGACCACTTTGCCCAGCGACA
+GAGCTGCATGAATACGTTTGCCAGCTGGTTTGGCTACATGCCGCTGATCC
+ACTCTCAGATGAGGCTCGACCCCGTCCTCTTTAAAGACCAGGTCTCTATT
+TTGAGGAAGAAATACCGAGACATTGAGCGACTTTGA
+>hg17_chr9_128764156_128764189_+
+ATGGCCTGCCTGAGCCCCTCGCAGCTCCAGAAG
+>hg17_chr9_128787519_128789136_-
+ATGACCCGAGAGTGCCCATCTCCGGCCCCGGGGCCTGGGGCTCCGCTGAG
+TGGATCGGTGCTGGCAGAGGCGGCAGTAGTGTTTGCAGTGGTGCTGAGCA
+TCCACGCAACCGTATGGGACCGATACTCGTGGTGCGCCGTGGCCCTCGCA
+GTGCAGGCCTTCTACGTCCAATACAAGTGGGACCGGCTGCTACAGCAGGG
+AAGCGCCGTCTTCCAGTTCCGAATGTCCGCAAACAGTGGCCTATTGCCCG
+CCTCCATGGTCATGCCTTTGCTTGGACTAGTCATGAAGGAGCGGTGCCAG
+ACTGCTGGGAACCCGTTCTTTGAGCGTTTTGGCATTGTGGTGGCAGCCAC
+TGGCATGGCAGTGGCCCTCTTCTCATCAGTGTTGGCGCTCGGCATCACTC
+GCCCAGTGCCAACCAACACTTGTGTCATCTTGGGCTTGGCTGGAGGTGTT
+ATCATTTATATCATGAAGCACTCGTTGAGCGTGGGGGAGGTGATCGAAGT
+CCTGGAAGTCCTTCTGATCTTCGTTTATCTCAACATGATCCTGCTGTACC
+TGCTGCCCCGCTGCTTCACCCCTGGTGAGGCACTGCTGGTATTGGGTGGC
+ATTAGCTTTGTCCTCAACCAGCTCATCAAGCGCTCTCTGACACTGGTGGA
+AAGTCAGGGGGACCCAGTGGACTTCTTCCTGCTGGTGGTGGTAGTAGGGA
+TGGTACTCATGGGCATTTTCTTCAGCACTCTGTTTGTCTTCATGGACTCA
+GGCACCTGGGCCTCCTCCATCTTCTTCCACCTCATGACCTGTGTGCTGAG
+CCTTGGTGTGGTCCTACCCTGGCTGCACCGGCTCATCCGCAGGAATCCCC
+TGCTCTGGCTTCTTCAGTTTCTCTTCCAGACAGACACCCGCATCTACCTC
+CTAGCCTATTGGTCTCTGCTGGCCACCTTGGCCTGCCTGGTGGTGCTGTA
+CCAGAATGCCAAGCGGTCATCTTCCGAGTCCAAGAAGCACCAGGCCCCCA
+CCATCGCCCGAAAGTATTTCCACCTCATTGTGGTAGCCACCTACATCCCA
+GGTATCATCTTTGACCGGCCACTGCTCTATGTAGCCGCCACTGTATGCCT
+GGCGGTCTTCATCTTCCTGGAGTATGTGCGCTACTTCCGCATCAAGCCTT
+TGGGTCACACTCTACGGAGCTTCCTGTCCCTTTTTCTGGATGAACGAGAC
+AGTGGACCACTCATTCTGACACACATCTACCTGCTCCTGGGCATGTCTCT
+TCCCATCTGGCTGATCCCCAGACCCTGCACACAGAAGGGTAGCCTGGGAG
+GAGCCAGGGCCCTCGTCCCCTATGCCGGTGTCCTGGCTGTGGGTGTGGGT
+GATACTGTGGCCTCCATCTTCGGTAGCACCATGGGGGAGATCCGCTGGCC
+TGGAACCAAAAAGACTTTTGAGGGGACCATGACATCTATATTTGCGCAGA
+TCATTTCTGTAGCTCTGATCTTAATCTTTGACAGTGGAGTGGACCTAAAC
+TACAGTTATGCTTGGATTTTGGGGTCCATCAGCACTGTGTCCCTCCTGGA
+AGCATACACTACACAGATAGACAATCTCCTTCTGCCTCTCTACCTCCTGA
+TATTGCTGATGGCCTAG
+>hg17_chr9_128882427_128882523_+
+ATGGCGTTCCGGAGGGCCGAGGGCACGTCTATGATCCAGGCCCTGGCCAT
+GACGGTGGCCGAGATCCCCGTGTTCCTGTACACGACGTTTGGGCAG
+>hg17_chr9_128937229_128937445_-
+GTCCCTGCCAAGACAGACTGTGTCATGTTCTTCGGGCCCGTGGTCCCCGA
+CGGCTACGGTGTCTGCTATAACCCCATGGAGGCCCACATCAACTTCTCCC
+TGTCGGCCTACAACAGCTGCGCGGAGACCAACGCCGCCCGCCTGGCGCAT
+TACCTGGAGAAGGCGCTCCTGGACATGCGTGCCCTGCTGCAGAGCCACCC
+CCGGGCCAAGCTCTGA
+>hg17_chrX_122745047_122745924_+
+ATGACTTTTAACAGTTTTGAAGGATCTAAAACTTGTGTACCTGCAGACAT
+CAATAAGGAAGAAGAATTTGTAGAAGAGTTTAATAGATTAAAAACTTTTG
+CTAATTTTCCAAGTGGTAGTCCTGTTTCAGCATCAACACTGGCACGAGCA
+GGGTTTCTTTATACTGGTGAAGGAGATACCGTGCGGTGCTTTAGTTGTCA
+TGCAGCTGTAGATAGATGGCAATATGGAGACTCAGCAGTTGGAAGACACA
+GGAAAGTATCCCCAAATTGCAGATTTATCAACGGCTTTTATCTTGAAAAT
+AGTGCCACGCAGTCTACAAATTCTGGTATCCAGAATGGTCAGTACAAAGT
+TGAAAACTATCTGGGAAGCAGAGATCATTTTGCCTTAGACAGGCCATCTG
+AGACACATGCAGACTATCTTTTGAGAACTGGGCAGGTTGTAGATATATCA
+GACACCATATACCCGAGGAACCCTGCCATGTATAGTGAAGAAGCTAGATT
+AAAGTCCTTTCAGAACTGGCCAGACTATGCTCACCTAACCCCAAGAGAGT
+TAGCAAGTGCTGGACTCTACTACACAGGTATTGGTGACCAAGTGCAGTGC
+TTTTGTTGTGGTGGAAAACTGAAAAATTGGGAACCTTGTGATCGTGCCTG
+GTCAGAACACAGGCGACACTTTCCTAATTGCTTCTTTGTTTTGGGCCGGA
+ATCTTAATATTCGAAGTGAATCTGATGCTGTGAGTTCTGATAGGAATTTC
+CCAAATTCAACAAATCTTCCAAGAAATCCATCCATGGCAGATTATGAAGC
+ACGGATCTTTACTTTTGGGACATGGATATACTCAGTTAACAAGGAGCAGC
+TTGCAAGAGCTGGATTTTATGCTTTAG
+>hg17_chrX_152648964_152649196_-
+TGACAACGAGGAGAAGGCCTTTGGCAGCAGCCAGCCATCGCTCAACGGGG
+ACATCAAGCCCCTGGGCAGTGACGACAGCCTGGCCGATTATGGGGGCAGC
+GTGGATGTTCAGTTCAACGAGGATGGTTCGTTCATTGGCCAGTACAGTGG
+CAAGAAGGAGAAGGAGGCGGCAGGGGGCAATGACAGCTCAGGGGCCACTT
+CCCCCATCAACCCTGCCGTGGCCCTAGAATAG
+>hg17_chrX_152691446_152691471_+
+ATGCTCATGGCGTCCACCACTTCCG
+>hg17_chrX_152694029_152694263_-
+GCTGTGGCACAGAACATGGACTCTGTGTTTAAGGAGCTCTTGGGAAAGAC
+CTCTGTCCGCCAGGGCCTTGGGCCAGCATCTACCACCTCTCCCAGTCCTG
+GGCCCCGAAGCCCAAAGGCCCCGCCCAGCAGCCGCCTGGGCAGGAACAAA
+GGCTTCTCCCGGGGCCCTGGGGCCCCAGCCTCACCCTCAGCTTCCCACCC
+CCAGGGCCTAGACACGACCCCCAAGCCACACTGA