Mercurial > repos > jjkoehorst > sapp

comparison rnaseq/cutadapt/test-data/master2snp_output.txt @ 11:a712b378e090

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cutadapt added
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 16:33:42 +0100
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10:3378d12591ea 11:a712b378e090
1 #{"column_names":["chr","pos","A","B","Q","1A","1B","1G","1Q"],
2 #"individuals":[["na",6]],
3 #"dbkey":"hg19","pos":2,"rPos":2,"ref":1,"scaffold":1,"species":"hg19"}
4 chr1 41980 A G -1 0 1 0 76
5 chr1 51672 T C -1 0 1 0 53
6 chr1 52237 T G -1 0 7 0 63
7 chr1 53205 G C -1 30 7 1 93
8 chr1 54042 C T -1 10 3 1 66
9 chr1 54585 T C -1 19 9 1 94
10 chr1 55163 C A -1 0 9 0 76
11 chr1 55301 C T -1 19 15 1 87
12 chr1 55321 C T -1 12 12 1 95
13 chr1 55325 T C -1 11 12 1 95
14 chr1 55925 T C -1 0 12 0 66
15 chr1 57951 A C -1 0 2 0 72
16 chr1 58210 A G -1 0 11 0 98
17 chr1 59050 A G -1 21 6 1 66
18 chr1 59343 C T -1 23 25 1 57
19 chr1 59497 T C -1 15 12 1 74
20 chr1 60828 C T -1 11 1 1 60
21 chr1 61441 A G -1 0 8 0 23
22 chr1 68305 C T -1 20 27 1 44
23 chr1 68315 T C -1 20 27 1 44
24 chr1 69452 G A -1 37 6 1 61
25 chr1 69510 A G -1 0 3 0 123
26 chr1 69551 G C -1 27 4 1 98
27 chr1 69568 T C -1 29 3 1 98
28 chr1 77461 G A -1 0 4 0 26
29 chr1 82733 T C -1 17 18 1 42
30 chr1 233472 C G -1 42 21 1 118