Mercurial > repos > jjkoehorst > sapp
diff rnaseq/cutadapt/test-data/master2snp_output.txt @ 11:a712b378e090
cutadapt added
author | jjkoehorst <jasperkoehorst@gmail.com> |
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date | Sat, 21 Feb 2015 16:33:42 +0100 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/rnaseq/cutadapt/test-data/master2snp_output.txt Sat Feb 21 16:33:42 2015 +0100 @@ -0,0 +1,30 @@ +#{"column_names":["chr","pos","A","B","Q","1A","1B","1G","1Q"], +#"individuals":[["na",6]], +#"dbkey":"hg19","pos":2,"rPos":2,"ref":1,"scaffold":1,"species":"hg19"} +chr1 41980 A G -1 0 1 0 76 +chr1 51672 T C -1 0 1 0 53 +chr1 52237 T G -1 0 7 0 63 +chr1 53205 G C -1 30 7 1 93 +chr1 54042 C T -1 10 3 1 66 +chr1 54585 T C -1 19 9 1 94 +chr1 55163 C A -1 0 9 0 76 +chr1 55301 C T -1 19 15 1 87 +chr1 55321 C T -1 12 12 1 95 +chr1 55325 T C -1 11 12 1 95 +chr1 55925 T C -1 0 12 0 66 +chr1 57951 A C -1 0 2 0 72 +chr1 58210 A G -1 0 11 0 98 +chr1 59050 A G -1 21 6 1 66 +chr1 59343 C T -1 23 25 1 57 +chr1 59497 T C -1 15 12 1 74 +chr1 60828 C T -1 11 1 1 60 +chr1 61441 A G -1 0 8 0 23 +chr1 68305 C T -1 20 27 1 44 +chr1 68315 T C -1 20 27 1 44 +chr1 69452 G A -1 37 6 1 61 +chr1 69510 A G -1 0 3 0 123 +chr1 69551 G C -1 27 4 1 98 +chr1 69568 T C -1 29 3 1 98 +chr1 77461 G A -1 0 4 0 26 +chr1 82733 T C -1 17 18 1 42 +chr1 233472 C G -1 42 21 1 118