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view rnaseq/cutadapt/test-data/gene_bed_maf_to_fasta_out.fasta @ 11:a712b378e090

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cutadapt added
author jjkoehorst <jasperkoehorst@gmail.com>
date Sat, 21 Feb 2015 16:33:42 +0100
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>hg17.BC028629
ATGATAATCACACAAACAAGTCACTGTTACATGACCAGCCTTGGGATTCTTTTCCTGATTAATATTCTCCCTGGAACCACTGGTCAAGGGGAATCAAGACGACAAGAACCCGGGGACTTTGTGAAGCAGGACATTGGCGGGCTGTCTCCTAAGCATGCCCCAGATATTCCTGATGACAGCACTGACAACATCACTATCTTCACCAGAATCTTGGATCGTCTTCTGGACGGCTATGACAACCGGCTGCGACCTGGGCTTGGAGATGCAGTGACTGAAGTGAAGACTGACATCTACGTGACCAGTTTTGGCCCTGTGTCAGACACTGACATGGAGTACACTATTGATGTATTTTTTCGGCAGACATGGCATGATGAAAGACTGAAATTTGATGGCCCCATGAAGATCCTTCCACTGAACAATCTCCTGGCTAGTAAGATCTGGACACCGGACACCTTCTTCCACAATGGCAAGAAATCAGTGGCTCATAACATGACCACGCCCAACAAGCTGCTCAGATTGGTGGACAACGGAACCCTCCTCTATACAATGAGGTTAACAATTCATGCTGAGTGTCCCATGCATTTGGAAGATTTTCCCATGGATGTGCATGCCTGCCCACTGAAGTTTGGAAGCTATGCCTATACAACAGCTGAAGTGGTTTATTCTTGGACTCTCGGAAAGAACAAATCCGTGGAAGTGGCACAGGATGGTTCTCGCTTGAACCAGTATGACCTTTTGGGCCATGTTGTTGGGACAGAGATAATCCGGTCTAGTACAGGAGAATATGTCGTCATGACAACCCACTTCCATCTCAAGCGAAAAATTGGCTACTTTGTGATCCAGACCTACTTGCCATGTATCATGACTGTCATTCTGTCACAAGTGTCGTTCTGGCTCAACAGAGAGTCTGTTCCTGCCCGTACAGTCTTTGGTGTCACCACTGTGCTTACCATGACCACCTTGAGTATCAGTGCCAGAAATTCCTTACCTAAAGTGGCATATGCGACGGCCATGGACTGGTTCATAGCCGTCTGTTATGCCTTTGTATTTTCTGCACTGATTGAATTTGCCACTGTCAACTATTTCACCAAGCGGAGTTGGGCTTGGGAAGGCAAGAAGGTGCCAGAGGCCCTGGAGATGAAGAAGAAAACACCAGCAGCCCCAGCAAAGAAAACCAGCACTACCTTCAACATCGTGGGGACCACCTATCCCATCAACCTGGCCAAGGACACTGAATTTTCCACCATCTCCAAGGGCGCTGCTCCCAGTGCCTCCTCAACCCCAACAATCATTGCTTCACCCAAGGCCACCTACGTGCAGGACAGCCCGACTGAGACCAAGACCTACAACAGTGTCAGCAAGGTTGACAAAATTTCCCGCATCATCTTTCCTGTGCTCTTTGCCATATTCAATCTGGTCTATTGGGCCACATATGTCAACCGGGAGTCAGCTATCAAGGGCATGATCCGCAAACAGTAG
>canFam1.BC028629
ATGATAGTCACACAAATGAGTCACTTCTACACAATCATCCTTGGGCTTCTTTTCCTGATTAATATTTTTCCTGGAACAACTGGCCAAGGGGAATCAAGACGACAAGAACCTGGGGATTTTGTGAAGCAGGATATTGGCGGACTCTCTCCTAAGCATGCCCCAGATATTCCTGATGACAGCACTGACAACATCACTATATTCACCAGAATCTTAGATCGTCTTCTGGATGGCTATGACAACCGACTACGACCTGGGCTTGGAGATGCGGTGACTGAAGTGAAGACTGATATCTATGTGACCAGTTTTGGCCCCGTGTCAGACACTGACATGGAGTACACCATTGATGTATTTTTTCGACAGACATGGCATGATGAAAGACTAAAATTTGATGGACCCATGAAGATTCTTCCACTGAACAATCTCCTGGCTAGTAAGATCTGGACCCCTGACACCTTCTTTCATAATGGCAAGAAATCAGTAGCCCATAACATGACCACACCTAACAAGCTGCTCAGACTGGTGGACAATGGAACCCTCCTCTACACAATGAGGTTAACAATTCATGCTGAGTGCCCCATGCATTTGGAAGATTTTCCTATGGATGTACATGCCTGCCCACTGAAGTTTGGAAGCTATGCCTATACAACAGCTGAAGTGGTTTATTCCTGGACTCTTGGGAAGAACAAATCTGTGGAAGTAGCGCAGGACGGCTCCCGCCTGAATCAGTATGACCTGCTGGGCCATGTTGTTGGGACAGAGATAATCCGGTCTAGTACAGGAGAATATGTCGTCATGACAACCCACTTTCATCTCAAACGAAAAATTGGCTACTTTGTGATCCAGACTTACTTGCCATGTATCATGACTGTCATTCTGTCACAAGTGTCTTTCTGGCTCAACAGAGAATCTGTCCCTGCCCGCACGGTCTTTGGTGTCACCACTGTTCTCACCATGACCACTTTGAGTATCAGTGCCAGAAACTCCTTACCTAAAGTGGCATACGCGACGGCCATGGATTGGTTCATAGCCGTCTGTTATGCCTTTGTATTTTCTGCGCTGATTGAATTTGCCACTGTTAACTACTTCACCAAGCGGAGTTGGGCTTGGGAAGGCAAGAAGGTGCCGGAGGCCCTGGAGATGAAGAAGAAAACACCAGCAGCCCCAACAAAGAAAACCAGCACCACCTTCAACATCGTGGGAACCACCTATCCCATCAATCTGGCCAAGGACACTGAGTTCTCTACCATCTCCAAGGGCGCTGCTCCCAGTGCCTCCTCAACCCCAACAATTATTGCTTCACCCAAGACCACCTACGTGCAGGACATCCCGACTGAGACCAAGACCTACAACAGTGTCAGCAAGGTTGACAAAATTTCCCGCATCATCTTTCCTGTGCTTTTTGCCATTTTTAATCTGGTCTACTGGGCCACCTATGTCAACCGGGAGTCAGCTATCAAGGGCATGATCCGCAAACACTAG
>mm5.BC028629
ATGATAATCACACAAATGTGGCACTTTTATGTGACCAGAGTTGTACTTCTTCTCCTGATTAGTATTCTCCCTGGAACCACTAGCCAAGGGGAATCAAGACGACAAGAACCTGGGGACTTTGTGAAACAAGATATTGGAGGACTCTCTCCCAAGCATGCCCCAGATATTCCTGACGATAGTACAGATAATATCACTATCTTCACTAGAATCTTGGATCGGCTTTTGGATGGCTATGATAACCGGCTTCGACCTGGACTTGGAGATGCAGTGACTGAAGTGAAGACAGACATCTATGTGACCAGTTTTGGCCCTGTGTCAGACACTGATATGGAATATACTATTGATGTATTTTTTAGACAGACATGGCATGATGAAAGACTGAAATTTGATGGACCAATGAAGATCCTTCCACTGAACAATCTTCTGGCTAGTAAGATATGGACTCCTGATACCTTCTTCCACAATGGTAAAAAATCAGTGGCTCACAATATGACCACACCCAACAAGCTGCTCAGACTGGTAGATAATGGGACCCTCCTCTATACAATGAGGTTAACAATACACGCTGAATGCCCCATGCATTTGGAAGATTTCCCCATGGATGTGCATGCCTGCCCACTGAAGTTTGGAAGCTATGCCTATACCAAAGCTGAAGTAATTTATTCTTGGACTCTTGGGAAGAACAAATCTGTGGAAGTAGCACAGGATGGCTCACGCCTGAATCAGTATGACTTGCTTGGCCATGTTGTTGGGACAGAGATAATCCGGTCTAGTACAGGAGAATATGTCGTCATGACAACCCACTTTCATCTGAAGAGAAAAATTGGCTACTTTGTCATCCAGACCTACTTGCCATGTATCATGACTGTCATTCTGTCACAAGTGTCTTTCTGGCTTAATAGAGAATCTGTCCCTGCCCGCACAGTCTTTGGTGTCACCACTGTTCTCACCATGACCACCTTGAGTATCAGTGCCAGAAACTCTTTACCTAAAGTGGCATACGCGACGGCCATGGACTGGTTCATAGCCGTCTGTTATGCCTTTGTATTTTCTGCACTGATTGAATTTGCTACTGTCAACTACTTCACCAAGCGGAGTTGGGCTTGGGAAGGCAAGAAGGTACCAGAGGCCCTGGAGATGAAGAAGAAAACACCAGCAGCTCCAACAAAGAAAA---ACACCACCTTCAACATAGTGGGTACCACCTATCCTATCAATCTGGCCAAGGATACTGAGTTCTCCACCATCTCCAAGGCTGCTGCTCCCAGTGCTTCTTCAACTCCAACAGCGATTGCTTCACCCAAGGCTACTTATGTGCAAGACAGTCCTGCTGAGACCAAGACCTACAACAGTGTCAGCAAGGTTGACAAAATTTCCCGCATCATCTTCCCTGTGCTCTTTGCCATATTCAATCTTGTCTATTGGGCTACATATGTGAACCGGGAATCAGCTATCAAGGGCATGATCCGCAAACAGTAG
>panTro1.BC028629
ATGATAATCACACAAACGAGTCACTGTTACATGACCAGCCTTGGGATTCTTTTCCTGATTAATATTCTCCCTGGAACCACTGGTCAAGGGGAATCAAGACGACAAGAACCTGGGGACTTTGTGAAGCAGGACATTGGCGGGCTGTCTCCTAAGCATGCCCCAGATATTCCTGATGACAGCACTGACAACATCACTATCTTCACCAGAATCTTGGATCGTCTTCTGGACGGCTATGACAACCGGCTGCGACCTGGGCTTGGAG--------------------------------------------------------------------GAGTACACTATTGATGTATTTTTTCGGCAGACATGGCATGATGAAAGACTGAAATTTGATGGCCCCATGAAGATCCTTCCACTGAACAATCTCCTGGCTAGTAAGATCTGGACACCTGACACCTTCTTCCACAATGGCAAGAAATCGGTGGCTCATAACATGACCACGCCCAACAAGCTGCTCAGATTGGTGGACAACGGAACCCTCCTCTATACAATGAGGTTAACAATTCATGCTGAGTGTCCCATGCATTTGGAAGATTTTCCCATGGATGTGCATGCCTGCCCACTGAAGTTTGGAAGCTATGCCTATACAACAGCTGAAGTGGTTTATTCTTGGACTCTCGGAAAGAACAAATCCGTGGAAGTGGCACAGGATGGTTCTCGCTTGAACCAGTATGACCTTTTGGGCCATGTTGTTGGGACAGAGATAATCCGGTCTAGTACAGGAGAATATGTCGTCATGACAACCCACTTCCATCTCAAGCGAAAAATTGGCTACTTTGTGATCCAGACCTACTTGCCATGTATCATGACTGTCATTCTGTCACAAGTGTCGTTCTGGCTCAACAGAGAGTCTGTTCCTGCCCGTACAGTCTTTGGTGTCACCACTGTGCTTACCATGACCACCTTGAGTATCAGTGCCAGAAATTCCTTACCTAAAGTGGCATATGCGACGGCCATGGACTGGTTCATAGCCGTCTGTTATGCCTTTGTATTTTCTGCACTGATTGAATTTGCCACTGTCAACTATTTCACCAAGCGGAGTTGGGCTTGGGAAGGCAAGAAGGTGCCAGAGGCCCTGGAGATGAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>rn3.BC028629
ATGATAACCACACAAATGTGGCACTTCTATGTGACCAGAGTTGGACTTCTTCTTCTGATTAGTATTCTACCTGGAACCACTGGCCAAGGGGAGTCAAGACGACAAGAACCTGGGGACTTTGTGAAGCAAGATATTGGAGGCCTCTCTCCCAAGCATGCCCCAGATATTCCTGACGATAGTACAGATAACATCACTATCTTCACTAGAATCTTGGATCGGCTTCTGGATGGCTATGACAACCGACTGCGACCTGGGCTTGGAGATGCAGTGACTGAAGTGAAGACAGATATCTATGTGACCAGTTTTGGCCCTGTGTCAGACACTGATATGGAATATACTATTGATGTGTTTTTTAGACAGACATGGCATGATGAAAGACTGAAATTTGATGGACCAATGAAGATCCTTCCACTGAATAATCTTCTGGCTAGTAAGATATGGACTCCAGATACCTTCTTCCACAACGGTAAAAAATCAGTGGCTCACAATATGACCACACCCAACAAGCTGCTCAGACTGGTAGACAATGGGACCCTCCTCTATACAATGAGGTTAACAATACATGCTGAATGCCCTATGCATTTAGAAGATTTCCCCATGGATGTGCATGCCTGTCCACTGAAGTTTGGAAGCTATGCCTATACCAAAGCTGAAGTAATTTATTCTTGGACTCTTGGGAAGAACAAATCTGTGGAAGTAGCTCAGGATGGCTCACGCCTGAATCAGTATGACTTGCTTGGTCATGTTGTTGGGACAGAGATAATCCGGTCTAGTACAGGAGAATATGTCGTCATGACAACCCACTTTCATCTGAAGAGAAAAATTGGCTACTTTGTCATCCAGACCTACTTGCCATGTATCATGACTGTCATTCTGTCACAAGTTTCTTTCTGGCTTAATAGAGAATCTGTCCCTGCTCGCACAGTCTTTGGTGTCACCACTGTTCTCACCATGACCACCTTGAGTATCAGTGCCAGAAACTCTTTACCTAAAGTGGCATACGCGACGGCCATGGACTGGTTCATAGCCGTCTGTTATGCCTTTGTATTTTCTGCACTGATTGAATTTGCTACTGTCAACTACTTCACCAAGCGAAGTTGGGCTTGGGAAGGCAAGAAGGTACCAGAGGCCCTGGAGATGAAG----------------------------------------------------------CCAACTACGCCCCGAATCTTTCCAAAGATCCTGTCCTCTCTACCATTTCCAAAAGTGCAACT---------------ACTCCAGAACCAA-------ACAAGAAGCCAG--------AGAACAAGCCAGCCGAAGCCAAGACTTTCAACAGTGTCAGCAAAATCGACAGAATGTCTAGAATAGTGTTCCCGGTTCTGTTTGGTACTTTTAATTTAGTTTACTGGGCTACGTATTTAAACCGGGAGCCTG-TATTAGGGG-------------------