Mercurial > repos > jjohnson > arriba

annotate test-data/genome.gtf @ 4:77021ad5037d draft

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"planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
author jjohnson
date Sat, 09 Oct 2021 15:41:49 +0000
parents
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77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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1 #!genome-build GRCh38.p12
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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2 #!genome-version GRCh38
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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3 #!genome-date 2013-12
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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4 #!genome-build-accession NCBI:GCA_000001405.27
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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5 #!genebuild-last-updated 2018-01
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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6 9 ensembl_havana gene 1 59388 . + . gene_id "ENSG00000107164"; gene_version "15"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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7 9 havana transcript 1 3122 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000467100"; transcript_version "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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8 9 havana exon 1 800 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000467100"; transcript_version "1"; exon_number "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001817525"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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9 9 havana exon 1695 3122 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000467100"; transcript_version "1"; exon_number "2"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001916817"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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10 9 ensembl_havana transcript 642 59388 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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11 9 ensembl_havana exon 642 800 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00001809698"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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12 9 ensembl_havana CDS 717 800 . + 0 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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13 9 ensembl_havana start_codon 717 719 . + 0 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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14 9 ensembl_havana exon 16519 16624 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "2"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003666938"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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15 9 ensembl_havana CDS 16519 16624 . + 0 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "2"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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16 9 ensembl_havana exon 30990 31023 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "3"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003653985"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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17 9 ensembl_havana CDS 30990 31023 . + 2 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "3"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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18 9 ensembl_havana exon 33492 33541 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "4"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003524972"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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19 9 ensembl_havana CDS 33492 33541 . + 1 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "4"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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20 9 ensembl_havana exon 33992 34063 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "5"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00001142545"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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21 9 ensembl_havana CDS 33992 34063 . + 2 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "5"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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22 9 ensembl_havana exon 35324 35381 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "6"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00001325924"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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23 9 ensembl_havana CDS 35324 35381 . + 2 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "6"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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24 9 ensembl_havana exon 37391 37553 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "7"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00001142533"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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25 9 ensembl_havana CDS 37391 37553 . + 1 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "7"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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26 9 ensembl_havana exon 38833 38931 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "8"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00000868110"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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27 9 ensembl_havana CDS 38833 38931 . + 0 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "8"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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28 9 ensembl_havana exon 41390 41494 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "9"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00000868111"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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29 9 ensembl_havana CDS 41390 41494 . + 0 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "9"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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30 9 ensembl_havana exon 43744 43846 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "10"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003599527"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
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31 9 ensembl_havana CDS 43744 43846 . + 0 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "10"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
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32 9 ensembl_havana exon 44647 44747 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "11"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003510910"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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33 9 ensembl_havana CDS 44647 44747 . + 2 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "11"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
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34 9 ensembl_havana exon 47400 47541 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "12"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003656711"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
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35 9 ensembl_havana CDS 47400 47541 . + 0 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "12"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
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36 9 ensembl_havana exon 51664 51824 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "13"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003664435"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
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parents:
diff changeset
37 9 ensembl_havana CDS 51664 51824 . + 2 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "13"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
38 9 ensembl_havana exon 52593 52666 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "14"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003543965"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
39 9 ensembl_havana CDS 52593 52666 . + 0 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "14"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
40 9 ensembl_havana exon 52978 53058 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "15"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003589683"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
41 9 ensembl_havana CDS 52978 53058 . + 1 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "15"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
42 9 ensembl_havana exon 53238 53314 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "16"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003277251"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
43 9 ensembl_havana CDS 53238 53314 . + 1 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "16"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
44 9 ensembl_havana exon 55703 55774 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "17"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00000984581"; exon_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
45 9 ensembl_havana CDS 55703 55774 . + 2 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "17"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
46 9 ensembl_havana exon 57035 57162 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "18"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00003474044"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
47 9 ensembl_havana CDS 57035 57162 . + 2 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "18"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
48 9 ensembl_havana exon 58050 59388 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "19"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; exon_id "ENSE00001142682"; exon_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
49 9 ensembl_havana CDS 58050 58055 . + 0 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "19"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; protein_id "ENSP00000318177"; protein_version "9"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
50 9 ensembl_havana stop_codon 58056 58058 . + 0 gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; exon_number "19"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
51 9 ensembl_havana five_prime_utr 642 716 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
52 9 ensembl_havana three_prime_utr 58059 59388 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000319725"; transcript_version "9"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS43893"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
53 9 havana transcript 2131 34058 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000465949"; transcript_version "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-202"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
54 9 havana exon 2131 2549 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000465949"; transcript_version "1"; exon_number "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-202"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001857425"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
55 9 havana exon 16519 16624 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000465949"; transcript_version "1"; exon_number "2"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-202"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003623125"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
56 9 havana exon 30990 31023 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000465949"; transcript_version "1"; exon_number "3"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-202"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003580334"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
57 9 havana exon 33492 33541 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000465949"; transcript_version "1"; exon_number "4"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-202"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003476260"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
58 9 havana exon 33992 34058 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000465949"; transcript_version "1"; exon_number "5"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-202"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001876169"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
59 9 havana transcript 41450 53058 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000487406"; transcript_version "2"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
60 9 havana exon 41450 41494 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000487406"; transcript_version "2"; exon_number "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001923777"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
61 9 havana exon 43744 43846 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000487406"; transcript_version "2"; exon_number "2"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003609749"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
62 9 havana exon 44647 44747 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000487406"; transcript_version "2"; exon_number "3"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003591608"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
63 9 havana exon 47400 47541 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000487406"; transcript_version "2"; exon_number "4"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003563348"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
64 9 havana exon 51664 51824 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000487406"; transcript_version "2"; exon_number "5"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003566283"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
65 9 havana exon 52197 52329 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000487406"; transcript_version "2"; exon_number "6"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001838515"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
66 9 havana exon 52593 52666 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000487406"; transcript_version "2"; exon_number "7"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003628321"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
67 9 havana exon 52978 53058 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000487406"; transcript_version "2"; exon_number "8"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003692918"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
68 9 havana transcript 55657 58087 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000472006"; transcript_version "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
69 9 havana exon 55657 55774 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000472006"; transcript_version "1"; exon_number "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001945141"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
70 9 havana exon 57035 57162 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000472006"; transcript_version "1"; exon_number "2"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003466669"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
71 9 havana exon 58050 58087 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000472006"; transcript_version "1"; exon_number "3"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001841778"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
72 9 havana transcript 56900 58269 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000492199"; transcript_version "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
73 9 havana exon 56900 57162 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000492199"; transcript_version "1"; exon_number "1"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001846551"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
74 9 havana exon 58050 58269 . + . gene_id "ENSG00000107164"; gene_version "15"; transcript_id "ENST00000492199"; transcript_version "1"; exon_number "2"; gene_name "FUBP3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FUBP3-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001857751"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
75 9 mirbase gene 47333 47399 . + . gene_id "ENSG00000277713"; gene_version "1"; gene_name "MIR6856"; gene_source "mirbase"; gene_biotype "miRNA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
76 9 mirbase transcript 47333 47399 . + . gene_id "ENSG00000277713"; gene_version "1"; transcript_id "ENST00000613330"; transcript_version "1"; gene_name "MIR6856"; gene_source "mirbase"; gene_biotype "miRNA"; transcript_name "MIR6856-201"; transcript_source "mirbase"; transcript_biotype "miRNA"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
77 9 mirbase exon 47333 47399 . + . gene_id "ENSG00000277713"; gene_version "1"; transcript_id "ENST00000613330"; transcript_version "1"; exon_number "1"; gene_name "MIR6856"; gene_source "mirbase"; gene_biotype "miRNA"; transcript_name "MIR6856-201"; transcript_source "mirbase"; transcript_biotype "miRNA"; exon_id "ENSE00003718221"; exon_version "1"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
78 9 havana gene 72835 73419 . + . gene_id "ENSG00000232172"; gene_version "1"; gene_name "AL359092.2"; gene_source "havana"; gene_biotype "processed_pseudogene";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
79 9 havana transcript 72835 73419 . + . gene_id "ENSG00000232172"; gene_version "1"; transcript_id "ENST00000423330"; transcript_version "1"; gene_name "AL359092.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; transcript_name "AL359092.2-201"; transcript_source "havana"; transcript_biotype "processed_pseudogene"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
80 9 havana exon 72835 73419 . + . gene_id "ENSG00000232172"; gene_version "1"; transcript_id "ENST00000423330"; transcript_version "1"; exon_number "1"; gene_name "AL359092.2"; gene_source "havana"; gene_biotype "processed_pseudogene"; transcript_name "AL359092.2-201"; transcript_source "havana"; transcript_biotype "processed_pseudogene"; exon_id "ENSE00001754197"; exon_version "1"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
81 9 ensembl_havana gene 85630 104017 . + . gene_id "ENSG00000130711"; gene_version "3"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
82 9 ensembl_havana transcript 85630 104017 . + . gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
83 9 ensembl_havana exon 85630 85912 . + . gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "1"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; exon_id "ENSE00000868121"; exon_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
84 9 ensembl_havana CDS 85690 85912 . + 0 gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "1"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; protein_id "ENSP00000253008"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
85 9 ensembl_havana start_codon 85690 85692 . + 0 gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "1"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
86 9 ensembl_havana exon 87644 87834 . + . gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "2"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; exon_id "ENSE00000868122"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
87 9 ensembl_havana CDS 87644 87834 . + 2 gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "2"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; protein_id "ENSP00000253008"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
88 9 ensembl_havana exon 89194 89349 . + . gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "3"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; exon_id "ENSE00000868123"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
89 9 ensembl_havana CDS 89194 89349 . + 0 gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "3"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; protein_id "ENSP00000253008"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
90 9 ensembl_havana exon 99565 99676 . + . gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "4"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; exon_id "ENSE00000868124"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
91 9 ensembl_havana CDS 99565 99676 . + 0 gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "4"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; protein_id "ENSP00000253008"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
92 9 ensembl_havana exon 102284 104017 . + . gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "5"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; exon_id "ENSE00001052791"; exon_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
93 9 ensembl_havana CDS 102284 102702 . + 2 gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "5"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; protein_id "ENSP00000253008"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
94 9 ensembl_havana stop_codon 102703 102705 . + 0 gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; exon_number "5"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
95 9 ensembl_havana five_prime_utr 85630 85689 . + . gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
96 9 ensembl_havana three_prime_utr 102706 104017 . + . gene_id "ENSG00000130711"; gene_version "3"; transcript_id "ENST00000253008"; transcript_version "2"; gene_name "PRDM12"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "PRDM12-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6934"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
97 9 ensembl_havana gene 114757 125930 . + . gene_id "ENSG00000130713"; gene_version "15"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
98 9 havana transcript 114757 124810 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000491115"; transcript_version "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-209"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
99 9 havana exon 114757 114949 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000491115"; transcript_version "6"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-209"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003656500"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
100 9 havana exon 116528 116629 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000491115"; transcript_version "6"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-209"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003598722"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
101 9 havana exon 120365 120430 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000491115"; transcript_version "6"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-209"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003594597"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
102 9 havana exon 123179 123346 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000491115"; transcript_version "6"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-209"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003546197"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
103 9 havana exon 124089 124217 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000491115"; transcript_version "6"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-209"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003514250"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
104 9 havana exon 124730 124810 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000491115"; transcript_version "6"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-209"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003287549"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
105 9 ensembl_havana transcript 114757 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
106 9 ensembl_havana exon 114757 114949 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; exon_id "ENSE00003482471"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
107 9 ensembl_havana CDS 114828 114949 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; protein_id "ENSP00000361433"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
108 9 ensembl_havana start_codon 114828 114830 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
109 9 ensembl_havana exon 116528 116629 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; exon_id "ENSE00003472459"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
110 9 ensembl_havana CDS 116528 116629 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; protein_id "ENSP00000361433"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
111 9 ensembl_havana exon 118618 118663 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; exon_id "ENSE00003655953"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
112 9 ensembl_havana CDS 118618 118663 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; protein_id "ENSP00000361433"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
113 9 ensembl_havana exon 119198 119287 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; exon_id "ENSE00003520620"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
114 9 ensembl_havana CDS 119198 119287 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; protein_id "ENSP00000361433"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
115 9 ensembl_havana exon 120365 120430 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; exon_id "ENSE00003458912"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
116 9 ensembl_havana CDS 120365 120430 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; protein_id "ENSP00000361433"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
117 9 ensembl_havana exon 121903 121971 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; exon_id "ENSE00003489687"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
118 9 ensembl_havana CDS 121903 121971 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; protein_id "ENSP00000361433"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
119 9 ensembl_havana exon 123170 123346 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; exon_id "ENSE00003690464"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
120 9 ensembl_havana CDS 123170 123346 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; protein_id "ENSP00000361433"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
121 9 ensembl_havana exon 124089 124217 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; exon_id "ENSE00003788968"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
122 9 ensembl_havana CDS 124089 124217 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; protein_id "ENSP00000361433"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
123 9 ensembl_havana exon 124730 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "9"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; exon_id "ENSE00003603139"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
124 9 ensembl_havana CDS 124730 124807 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "9"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; protein_id "ENSP00000361433"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
125 9 ensembl_havana stop_codon 124808 124810 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; exon_number "9"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
126 9 ensembl_havana five_prime_utr 114757 114827 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
127 9 ensembl_havana three_prime_utr 124811 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372358"; transcript_version "9"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-204"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6935"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
128 9 ensembl transcript 114796 125930 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
129 9 ensembl exon 114796 114949 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; exon_id "ENSE00002212082"; exon_version "2"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
130 9 ensembl CDS 114828 114949 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; protein_id "ENSP00000444917"; protein_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
131 9 ensembl start_codon 114828 114830 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
132 9 ensembl exon 116528 116629 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; exon_id "ENSE00003472459"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
133 9 ensembl CDS 116528 116629 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; protein_id "ENSP00000444917"; protein_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
134 9 ensembl exon 118618 118663 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; exon_id "ENSE00003655953"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
135 9 ensembl CDS 118618 118663 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; protein_id "ENSP00000444917"; protein_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
136 9 ensembl exon 119198 119287 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; exon_id "ENSE00003520620"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
137 9 ensembl CDS 119198 119287 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; protein_id "ENSP00000444917"; protein_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
138 9 ensembl exon 120365 120430 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; exon_id "ENSE00003458912"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
139 9 ensembl CDS 120365 120430 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; protein_id "ENSP00000444917"; protein_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
140 9 ensembl exon 123179 123346 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; exon_id "ENSE00003494225"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
141 9 ensembl CDS 123179 123346 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; protein_id "ENSP00000444917"; protein_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
142 9 ensembl exon 124089 124217 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; exon_id "ENSE00003788968"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
143 9 ensembl CDS 124089 124217 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; protein_id "ENSP00000444917"; protein_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
144 9 ensembl exon 124730 125930 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; exon_id "ENSE00002280160"; exon_version "2"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
145 9 ensembl CDS 124730 124807 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; protein_id "ENSP00000444917"; protein_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
146 9 ensembl stop_codon 124808 124810 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
147 9 ensembl five_prime_utr 114796 114827 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
148 9 ensembl three_prime_utr 124811 125930 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000546165"; transcript_version "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-211"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65160"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
149 9 havana transcript 114811 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000430138"; transcript_version "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
150 9 havana exon 114811 114949 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000430138"; transcript_version "6"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001844967"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
151 9 havana exon 116528 116642 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000430138"; transcript_version "6"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001898023"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
152 9 havana exon 118618 119287 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000430138"; transcript_version "6"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001872545"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
153 9 havana exon 120365 120430 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000430138"; transcript_version "6"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003594597"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
154 9 havana exon 121903 121971 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000430138"; transcript_version "6"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003623793"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
155 9 havana exon 123170 123346 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000430138"; transcript_version "6"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003502341"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
156 9 havana exon 124089 124217 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000430138"; transcript_version "6"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003514250"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
157 9 havana exon 124730 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000430138"; transcript_version "6"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003684236"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
158 9 havana transcript 114816 120827 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000490641"; transcript_version "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-208"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
159 9 havana exon 114816 114949 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000490641"; transcript_version "5"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-208"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003517683"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
160 9 havana exon 116528 116629 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000490641"; transcript_version "5"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-208"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003598722"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
161 9 havana exon 120365 120827 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000490641"; transcript_version "5"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-208"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001859738"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
162 9 havana transcript 114816 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
163 9 havana exon 114816 114949 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003679934"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
164 9 havana CDS 114828 114949 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361427"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
165 9 havana start_codon 114828 114830 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
166 9 havana exon 116528 116629 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003472459"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
167 9 havana CDS 116528 116629 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361427"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
168 9 havana exon 118618 118663 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003655953"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
169 9 havana CDS 118618 118663 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361427"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
170 9 havana exon 119198 119287 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003520620"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
171 9 havana CDS 119198 119287 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361427"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
172 9 havana exon 120365 120430 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003458912"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
173 9 havana CDS 120365 120430 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361427"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
174 9 havana exon 121903 121971 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003489687"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
175 9 havana CDS 121903 121971 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361427"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
176 9 havana exon 123194 123346 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001457596"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
177 9 havana CDS 123194 123346 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361427"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
178 9 havana exon 124089 124217 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003788968"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
179 9 havana CDS 124089 124217 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361427"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
180 9 havana exon 124730 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "9"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003603139"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
181 9 havana CDS 124730 124807 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "9"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361427"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
182 9 havana stop_codon 124808 124810 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; exon_number "9"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
183 9 havana five_prime_utr 114816 114827 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
184 9 havana three_prime_utr 124811 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372352"; transcript_version "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
185 9 ensembl_havana transcript 114822 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
186 9 ensembl_havana exon 114822 114949 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; exon_id "ENSE00001868104"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
187 9 ensembl_havana CDS 114828 114949 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; protein_id "ENSP00000361426"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
188 9 ensembl_havana start_codon 114828 114830 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
189 9 ensembl_havana exon 116528 116629 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; exon_id "ENSE00003472459"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
190 9 ensembl_havana CDS 116528 116629 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; protein_id "ENSP00000361426"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
191 9 ensembl_havana exon 118618 118663 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; exon_id "ENSE00003655953"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
192 9 ensembl_havana CDS 118618 118663 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; protein_id "ENSP00000361426"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
193 9 ensembl_havana exon 120365 120430 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; exon_id "ENSE00003458912"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
194 9 ensembl_havana CDS 120365 120430 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; protein_id "ENSP00000361426"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
195 9 ensembl_havana exon 121903 121971 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; exon_id "ENSE00003489687"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
196 9 ensembl_havana CDS 121903 121971 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; protein_id "ENSP00000361426"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
197 9 ensembl_havana exon 123170 123346 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; exon_id "ENSE00003690464"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
198 9 ensembl_havana CDS 123170 123346 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; protein_id "ENSP00000361426"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
199 9 ensembl_havana exon 124089 124217 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; exon_id "ENSE00003788968"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
200 9 ensembl_havana CDS 124089 124217 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; protein_id "ENSP00000361426"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
201 9 ensembl_havana exon 124730 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; exon_id "ENSE00003603139"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
202 9 ensembl_havana CDS 124730 124807 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; protein_id "ENSP00000361426"; protein_version "3"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
203 9 ensembl_havana stop_codon 124808 124810 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; exon_number "8"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
204 9 ensembl_havana five_prime_utr 114822 114827 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
205 9 ensembl_havana three_prime_utr 124811 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372351"; transcript_version "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS65161"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
206 9 havana transcript 114823 123329 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
207 9 havana exon 114823 114949 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001632780"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
208 9 havana CDS 114828 114949 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361425"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
209 9 havana start_codon 114828 114830 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
210 9 havana exon 116528 116629 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003472459"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
211 9 havana CDS 116528 116629 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361425"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
212 9 havana exon 118618 118663 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003655953"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
213 9 havana CDS 118618 118663 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361425"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
214 9 havana exon 119198 119287 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003520620"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
215 9 havana CDS 119198 119287 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361425"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
216 9 havana exon 120365 120430 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003458912"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
217 9 havana CDS 120365 120430 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361425"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
218 9 havana exon 121903 121971 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003489687"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
219 9 havana CDS 121903 121971 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361425"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
220 9 havana exon 123224 123329 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001621696"; exon_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
221 9 havana CDS 123224 123329 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361425"; protein_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
222 9 havana five_prime_utr 114823 114827 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000372350"; transcript_version "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
223 9 havana transcript 114842 120717 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000463488"; transcript_version "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
224 9 havana exon 114842 114949 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000463488"; transcript_version "1"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003503714"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
225 9 havana exon 116528 116629 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000463488"; transcript_version "1"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003598722"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
226 9 havana exon 118618 118663 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000463488"; transcript_version "1"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003624327"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
227 9 havana exon 119198 119287 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000463488"; transcript_version "1"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003559038"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
228 9 havana exon 120365 120717 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000463488"; transcript_version "1"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001890209"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
229 9 havana transcript 114842 124217 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
230 9 havana exon 114842 114949 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003682005"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
231 9 havana CDS 114842 114949 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000418463"; protein_version "2"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
232 9 havana exon 116528 116629 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003472459"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
233 9 havana CDS 116528 116629 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000418463"; protein_version "2"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
234 9 havana exon 118618 118663 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003655953"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
235 9 havana CDS 118618 118663 . + 1 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000418463"; protein_version "2"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
236 9 havana exon 119198 119287 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003520620"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
237 9 havana CDS 119198 119287 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "4"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000418463"; protein_version "2"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
238 9 havana exon 120365 120430 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003458912"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
239 9 havana CDS 120365 120430 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "5"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000418463"; protein_version "2"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
240 9 havana exon 123179 123346 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003494225"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
241 9 havana CDS 123179 123346 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "6"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000418463"; protein_version "2"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
242 9 havana exon 124089 124217 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003788968"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
243 9 havana CDS 124089 124217 . + 0 gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000495699"; transcript_version "2"; exon_number "7"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-210"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000418463"; protein_version "2"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
244 9 havana transcript 121878 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000467138"; transcript_version "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
245 9 havana exon 121878 123346 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000467138"; transcript_version "1"; exon_number "1"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001890717"; exon_version "1"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
246 9 havana exon 124089 124217 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000467138"; transcript_version "1"; exon_number "2"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003514250"; exon_version "1"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
247 9 havana exon 124730 125897 . + . gene_id "ENSG00000130713"; gene_version "15"; transcript_id "ENST00000467138"; transcript_version "1"; exon_number "3"; gene_name "EXOSC2"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "EXOSC2-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003684236"; exon_version "1"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
248 9 ensembl_havana gene 134982 308711 . + . gene_id "ENSG00000097007"; gene_version "17"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
249 9 ensembl_havana transcript 134982 306719 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
250 9 ensembl_havana exon 134982 135491 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "1"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00001457586"; exon_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
251 9 ensembl_havana CDS 135356 135491 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "1"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
252 9 ensembl_havana start_codon 135356 135358 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "1"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
253 9 ensembl_havana exon 275100 275273 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "2"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00000984287"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
254 9 ensembl_havana CDS 275100 275273 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "2"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
255 9 ensembl_havana exon 275837 276132 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "3"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00002690665"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
256 9 ensembl_havana CDS 275837 276132 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "3"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
257 9 ensembl_havana exon 283799 284071 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "4"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00002065214"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
258 9 ensembl_havana CDS 283799 284071 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "4"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
259 9 ensembl_havana exon 293165 293249 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "5"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00001726283"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
260 9 ensembl_havana CDS 293165 293249 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "5"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
261 9 ensembl_havana exon 293896 294073 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "6"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00001700841"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
262 9 ensembl_havana CDS 293896 294073 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "6"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
263 9 ensembl_havana exon 295904 296088 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "7"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00001758713"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
264 9 ensembl_havana CDS 295904 296088 . + 1 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "7"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
265 9 ensembl_havana exon 299451 299603 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "8"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00001741732"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
266 9 ensembl_havana CDS 299451 299603 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "8"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
267 9 ensembl_havana exon 301104 301193 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "9"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00001715343"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
268 9 ensembl_havana CDS 301104 301193 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "9"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
269 9 ensembl_havana exon 301536 301700 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "10"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00001781962"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
270 9 ensembl_havana CDS 301536 301700 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "10"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
271 9 ensembl_havana exon 305005 306719 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "11"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; exon_id "ENSE00001938256"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
272 9 ensembl_havana CDS 305005 306716 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "11"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; protein_id "ENSP00000361423"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
273 9 ensembl_havana stop_codon 306717 306719 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; exon_number "11"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
274 9 ensembl_havana five_prime_utr 134982 135355 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000372348"; transcript_version "6"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35165"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
275 9 havana transcript 135016 275158 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000393293"; transcript_version "4"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
276 9 havana exon 135016 135491 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000393293"; transcript_version "4"; exon_number "1"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001514748"; exon_version "4"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
277 9 havana CDS 135356 135491 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000393293"; transcript_version "4"; exon_number "1"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000376971"; protein_version "4"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
278 9 havana start_codon 135356 135358 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000393293"; transcript_version "4"; exon_number "1"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
279 9 havana exon 275103 275158 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000393293"; transcript_version "4"; exon_number "2"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001751015"; exon_version "2"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
280 9 havana CDS 275103 275158 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000393293"; transcript_version "4"; exon_number "2"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000376971"; protein_version "4"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
281 9 havana five_prime_utr 135016 135355 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000393293"; transcript_version "4"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
282 9 ensembl_havana transcript 256102 308711 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
283 9 ensembl_havana exon 256102 256561 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "1"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00001955789"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
284 9 ensembl_havana CDS 256483 256561 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "1"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
285 9 ensembl_havana start_codon 256483 256485 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "1"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
286 9 ensembl_havana exon 275100 275273 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "2"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00000984287"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
287 9 ensembl_havana CDS 275100 275273 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "2"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
288 9 ensembl_havana exon 275837 276132 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "3"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00002690665"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
289 9 ensembl_havana CDS 275837 276132 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "3"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
290 9 ensembl_havana exon 283799 284071 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "4"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00002065214"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
291 9 ensembl_havana CDS 283799 284071 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "4"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
292 9 ensembl_havana exon 293165 293249 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "5"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00001726283"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
293 9 ensembl_havana CDS 293165 293249 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "5"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
294 9 ensembl_havana exon 293896 294073 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "6"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00001700841"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
295 9 ensembl_havana CDS 293896 294073 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "6"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
296 9 ensembl_havana exon 295904 296088 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "7"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00001758713"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
297 9 ensembl_havana CDS 295904 296088 . + 1 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "7"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
298 9 ensembl_havana exon 299451 299603 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "8"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00001741732"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
299 9 ensembl_havana CDS 299451 299603 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "8"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
300 9 ensembl_havana exon 301104 301193 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "9"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00001715343"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
301 9 ensembl_havana CDS 301104 301193 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "9"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
302 9 ensembl_havana exon 301536 301700 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "10"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00001781962"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
303 9 ensembl_havana CDS 301536 301700 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "10"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
304 9 ensembl_havana exon 305005 308711 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "11"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; exon_id "ENSE00001457584"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
305 9 ensembl_havana CDS 305005 306716 . + 2 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "11"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; protein_id "ENSP00000323315"; protein_version "5"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
306 9 ensembl_havana stop_codon 306717 306719 . + 0 gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; exon_number "11"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
307 9 ensembl_havana five_prime_utr 256102 256482 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
308 9 ensembl_havana three_prime_utr 306720 308711 . + . gene_id "ENSG00000097007"; gene_version "17"; transcript_id "ENST00000318560"; transcript_version "5"; gene_name "ABL1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "ABL1-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS35166"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
309 9 havana gene 145822 146086 . - . gene_id "ENSG00000224797"; gene_version "1"; gene_name "AL359092.1"; gene_source "havana"; gene_biotype "processed_pseudogene";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
310 9 havana transcript 145822 146086 . - . gene_id "ENSG00000224797"; gene_version "1"; transcript_id "ENST00000417156"; transcript_version "1"; gene_name "AL359092.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; transcript_name "AL359092.1-201"; transcript_source "havana"; transcript_biotype "processed_pseudogene"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
311 9 havana exon 145822 146086 . - . gene_id "ENSG00000224797"; gene_version "1"; transcript_id "ENST00000417156"; transcript_version "1"; exon_number "1"; gene_name "AL359092.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; transcript_name "AL359092.1-201"; transcript_source "havana"; transcript_biotype "processed_pseudogene"; exon_id "ENSE00001716475"; exon_version "1"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
312 9 ensembl_havana gene 313738 317848 . - . gene_id "ENSG00000188710"; gene_version "2"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
313 9 havana transcript 313738 317848 . - . gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000623824"; transcript_version "1"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
314 9 havana exon 317613 317848 . - . gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000623824"; transcript_version "1"; exon_number "1"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; exon_id "ENSE00003758115"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
315 9 havana exon 316733 317017 . - . gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000623824"; transcript_version "1"; exon_number "2"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; exon_id "ENSE00003757521"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
316 9 havana exon 313738 314874 . - . gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000623824"; transcript_version "1"; exon_number "3"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; exon_id "ENSE00003758863"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
317 9 havana CDS 314467 314874 . - 0 gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000623824"; transcript_version "1"; exon_number "3"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; protein_id "ENSP00000485512"; protein_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
318 9 havana start_codon 314872 314874 . - 0 gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000623824"; transcript_version "1"; exon_number "3"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
319 9 havana stop_codon 314464 314466 . - 0 gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000623824"; transcript_version "1"; exon_number "3"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
320 9 havana five_prime_utr 317613 317848 . - . gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000623824"; transcript_version "1"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
321 9 havana five_prime_utr 316733 317017 . - . gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000623824"; transcript_version "1"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
322 9 havana three_prime_utr 313738 314463 . - . gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000623824"; transcript_version "1"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
323 9 ensembl transcript 314464 314874 . - . gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000343079"; transcript_version "1"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
324 9 ensembl exon 314464 314874 . - . gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000343079"; transcript_version "1"; exon_number "1"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; exon_id "ENSE00001365427"; exon_version "1"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
325 9 ensembl CDS 314467 314874 . - 0 gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000343079"; transcript_version "1"; exon_number "1"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; protein_id "ENSP00000345487"; protein_version "1"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
326 9 ensembl start_codon 314872 314874 . - 0 gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000343079"; transcript_version "1"; exon_number "1"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
327 9 ensembl stop_codon 314464 314466 . - 0 gene_id "ENSG00000188710"; gene_version "2"; transcript_id "ENST00000343079"; transcript_version "1"; exon_number "1"; gene_name "QRFP"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "QRFP-201"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6936"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
328 9 ensembl_havana gene 323474 360322 . - . gene_id "ENSG00000130720"; gene_version "12"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
329 9 ensembl transcript 323474 360104 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
330 9 ensembl exon 360039 360104 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001729600"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
331 9 ensembl exon 359572 359684 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00003661732"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
332 9 ensembl CDS 359572 359643 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000414501"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
333 9 ensembl start_codon 359641 359643 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
334 9 ensembl exon 350603 351082 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00003515123"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
335 9 ensembl CDS 350603 351082 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000414501"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
336 9 ensembl exon 345273 345432 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "4"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001613459"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
337 9 ensembl CDS 345273 345432 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "4"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000414501"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
338 9 ensembl exon 344780 344916 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001636266"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
339 9 ensembl CDS 344780 344916 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000414501"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
340 9 ensembl exon 332828 332924 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001767299"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
341 9 ensembl CDS 332828 332924 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000414501"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
342 9 ensembl exon 326270 326449 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "7"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001772617"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
343 9 ensembl CDS 326270 326449 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "7"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000414501"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
344 9 ensembl exon 323474 325359 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "8"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001781913"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
345 9 ensembl CDS 325103 325359 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "8"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000414501"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
346 9 ensembl stop_codon 325100 325102 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; exon_number "8"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
347 9 ensembl five_prime_utr 360039 360104 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
348 9 ensembl five_prime_utr 359644 359684 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
349 9 ensembl three_prime_utr 323474 325099 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000448616"; transcript_version "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-204"; transcript_source "ensembl"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
350 9 havana transcript 323476 351015 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
351 9 havana exon 350603 351015 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001755634"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
352 9 havana CDS 350603 351015 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000395319"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
353 9 havana exon 345273 345432 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001613459"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
354 9 havana CDS 345273 345432 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000395319"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
355 9 havana exon 344780 344916 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001636266"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
356 9 havana CDS 344780 344916 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000395319"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
357 9 havana exon 332828 332924 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "4"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001767299"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
358 9 havana CDS 332828 332924 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "4"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000395319"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
359 9 havana exon 323476 325108 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001771952"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
360 9 havana CDS 324987 325108 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000395319"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
361 9 havana stop_codon 324984 324986 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
362 9 havana three_prime_utr 323476 324983 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000444139"; transcript_version "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
363 9 ensembl_havana transcript 323476 359886 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
364 9 ensembl_havana exon 359572 359886 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001920779"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
365 9 ensembl_havana CDS 359572 359643 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000361413"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
366 9 ensembl_havana start_codon 359641 359643 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
367 9 ensembl_havana exon 350603 351082 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00003515123"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
368 9 ensembl_havana CDS 350603 351082 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000361413"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
369 9 ensembl_havana exon 345273 345432 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001613459"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
370 9 ensembl_havana CDS 345273 345432 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000361413"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
371 9 ensembl_havana exon 344780 344916 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "4"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001636266"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
372 9 ensembl_havana CDS 344780 344916 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "4"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000361413"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
373 9 ensembl_havana exon 332828 332924 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001767299"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
374 9 ensembl_havana CDS 332828 332924 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000361413"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
375 9 ensembl_havana exon 326270 326449 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001772617"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
376 9 ensembl_havana CDS 326270 326449 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000361413"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
377 9 ensembl_havana exon 323476 325359 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "7"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; exon_id "ENSE00001457570"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
378 9 ensembl_havana CDS 325103 325359 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "7"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; protein_id "ENSP00000361413"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
379 9 ensembl_havana stop_codon 325100 325102 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; exon_number "7"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
380 9 ensembl_havana five_prime_utr 359644 359886 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
381 9 ensembl_havana three_prime_utr 323476 325099 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372338"; transcript_version "8"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6937"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
382 9 havana transcript 324712 357412 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
383 9 havana exon 357247 357412 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001457565"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
384 9 havana exon 350603 351082 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003489119"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
385 9 havana CDS 350603 350680 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361412"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
386 9 havana start_codon 350678 350680 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
387 9 havana exon 345273 345432 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001613459"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
388 9 havana CDS 345273 345432 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361412"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
389 9 havana exon 344780 344916 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "4"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001636266"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
390 9 havana CDS 344780 344916 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "4"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361412"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
391 9 havana exon 332828 332924 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001767299"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
392 9 havana CDS 332828 332924 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361412"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
393 9 havana exon 326270 326449 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001772617"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
394 9 havana CDS 326270 326449 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361412"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
395 9 havana exon 324712 325359 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "7"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003393665"; exon_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
396 9 havana CDS 325103 325359 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "7"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000361412"; protein_version "1"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
397 9 havana stop_codon 325100 325102 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; exon_number "7"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
398 9 havana five_prime_utr 357247 357412 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
399 9 havana five_prime_utr 350681 351082 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
400 9 havana three_prime_utr 324712 325099 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000372337"; transcript_version "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
401 9 havana transcript 332907 360176 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
402 9 havana exon 360039 360176 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001697788"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
403 9 havana exon 359572 359684 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003661732"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
404 9 havana CDS 359572 359643 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000393894"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
405 9 havana start_codon 359641 359643 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
406 9 havana exon 350603 351082 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003515123"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
407 9 havana CDS 350603 351082 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000393894"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
408 9 havana exon 345273 345432 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "4"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001613459"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
409 9 havana CDS 345273 345432 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "4"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000393894"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
410 9 havana exon 344780 344916 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001636266"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
411 9 havana CDS 344780 344916 . - 2 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000393894"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
412 9 havana exon 332907 332924 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001607252"; exon_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
413 9 havana CDS 332907 332924 . - 0 gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; exon_number "6"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000393894"; protein_version "1"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
414 9 havana five_prime_utr 360039 360176 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
415 9 havana five_prime_utr 359644 359684 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000451466"; transcript_version "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-205"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "mRNA_end_NF"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
416 9 havana transcript 359053 360175 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000486250"; transcript_version "5"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
417 9 havana exon 360039 360175 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000486250"; transcript_version "5"; exon_number "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001845870"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
418 9 havana exon 359572 359684 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000486250"; transcript_version "5"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003604993"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
419 9 havana exon 359053 359251 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000486250"; transcript_version "5"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001892732"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
420 9 havana transcript 359053 360322 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000463475"; transcript_version "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
421 9 havana exon 360250 360322 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000463475"; transcript_version "1"; exon_number "1"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001865961"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
422 9 havana exon 359572 359684 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000463475"; transcript_version "1"; exon_number "2"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003604993"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
423 9 havana exon 359053 359251 . - . gene_id "ENSG00000130720"; gene_version "12"; transcript_id "ENST00000463475"; transcript_version "1"; exon_number "3"; gene_name "FIBCD1"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "FIBCD1-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001892732"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
424 9 havana gene 354887 366556 . + . gene_id "ENSG00000236658"; gene_version "1"; gene_name "AL161733.1"; gene_source "havana"; gene_biotype "antisense";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
425 9 havana transcript 354887 366556 . + . gene_id "ENSG00000236658"; gene_version "1"; transcript_id "ENST00000421067"; transcript_version "1"; gene_name "AL161733.1"; gene_source "havana"; gene_biotype "antisense"; transcript_name "AL161733.1-201"; transcript_source "havana"; transcript_biotype "antisense"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
426 9 havana exon 354887 354957 . + . gene_id "ENSG00000236658"; gene_version "1"; transcript_id "ENST00000421067"; transcript_version "1"; exon_number "1"; gene_name "AL161733.1"; gene_source "havana"; gene_biotype "antisense"; transcript_name "AL161733.1-201"; transcript_source "havana"; transcript_biotype "antisense"; exon_id "ENSE00001713406"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
427 9 havana exon 365316 365408 . + . gene_id "ENSG00000236658"; gene_version "1"; transcript_id "ENST00000421067"; transcript_version "1"; exon_number "2"; gene_name "AL161733.1"; gene_source "havana"; gene_biotype "antisense"; transcript_name "AL161733.1-201"; transcript_source "havana"; transcript_biotype "antisense"; exon_id "ENSE00001611044"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
428 9 havana exon 366259 366556 . + . gene_id "ENSG00000236658"; gene_version "1"; transcript_id "ENST00000421067"; transcript_version "1"; exon_number "3"; gene_name "AL161733.1"; gene_source "havana"; gene_biotype "antisense"; transcript_name "AL161733.1-201"; transcript_source "havana"; transcript_biotype "antisense"; exon_id "ENSE00001661313"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
429 9 ensembl_havana gene 430118 515509 . + . gene_id "ENSG00000050555"; gene_version "17"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
430 9 ensembl_havana transcript 430118 514095 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
431 9 ensembl_havana exon 430118 430623 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "1"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001865686"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
432 9 ensembl_havana CDS 430251 430623 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "1"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
433 9 ensembl_havana start_codon 430251 430253 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "1"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
434 9 ensembl_havana exon 447321 447625 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "2"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00003647272"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
435 9 ensembl_havana CDS 447321 447625 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "2"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
436 9 ensembl_havana exon 453081 453211 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "3"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00003527174"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
437 9 ensembl_havana CDS 453081 453211 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "3"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
438 9 ensembl_havana exon 457202 457368 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "4"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00003683355"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
439 9 ensembl_havana CDS 457202 457368 . + 1 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "4"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
440 9 ensembl_havana exon 459900 460088 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "5"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00003515571"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
441 9 ensembl_havana CDS 459900 460088 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "5"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
442 9 ensembl_havana exon 460167 460284 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "6"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00003622077"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
443 9 ensembl_havana CDS 460167 460284 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "6"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
444 9 ensembl_havana exon 462673 462771 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "7"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00003521348"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
445 9 ensembl_havana CDS 462673 462771 . + 1 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "7"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
446 9 ensembl_havana exon 466560 466696 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "8"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141322"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
447 9 ensembl_havana CDS 466560 466696 . + 1 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "8"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
448 9 ensembl_havana exon 470056 470166 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "9"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141317"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
449 9 ensembl_havana CDS 470056 470166 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "9"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
450 9 ensembl_havana exon 473527 473719 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "10"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141311"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
451 9 ensembl_havana CDS 473527 473719 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "10"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
452 9 ensembl_havana exon 473886 474001 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "11"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141305"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
453 9 ensembl_havana CDS 473886 474001 . + 1 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "11"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
454 9 ensembl_havana exon 477965 478183 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "12"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141297"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
455 9 ensembl_havana CDS 477965 478183 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "12"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
456 9 ensembl_havana exon 482071 482259 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "13"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00000896096"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
457 9 ensembl_havana CDS 482071 482259 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "13"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
458 9 ensembl_havana exon 487996 488241 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "14"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00000896097"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
459 9 ensembl_havana CDS 487996 488241 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "14"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
460 9 ensembl_havana exon 489114 489267 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "15"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001095078"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
461 9 ensembl_havana CDS 489114 489267 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "15"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
462 9 ensembl_havana exon 489944 490086 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "16"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141273"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
463 9 ensembl_havana CDS 489944 490086 . + 1 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "16"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
464 9 ensembl_havana exon 490708 490886 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "17"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141268"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
465 9 ensembl_havana CDS 490708 490886 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "17"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
466 9 ensembl_havana exon 492520 492661 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "18"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00000868164"; exon_version "2"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
467 9 ensembl_havana CDS 492520 492661 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "18"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
468 9 ensembl_havana exon 493666 493871 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "19"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141256"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
469 9 ensembl_havana CDS 493666 493871 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "19"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
470 9 ensembl_havana exon 494281 494357 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "20"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00000732606"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
471 9 ensembl_havana CDS 494281 494357 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "20"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
472 9 ensembl_havana exon 496867 497001 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "21"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141244"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
473 9 ensembl_havana CDS 496867 497001 . + 1 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "21"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
474 9 ensembl_havana exon 498223 498370 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "22"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141238"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
475 9 ensembl_havana CDS 498223 498370 . + 1 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "22"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
476 9 ensembl_havana exon 500185 500334 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "23"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00000868166"; exon_version "3"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
477 9 ensembl_havana CDS 500185 500334 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "23"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
478 9 ensembl_havana exon 503095 503197 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "24"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001369998"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
479 9 ensembl_havana CDS 503095 503197 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "24"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
480 9 ensembl_havana exon 506560 506759 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "25"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00000732612"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
481 9 ensembl_havana CDS 506560 506759 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "25"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
482 9 ensembl_havana exon 508512 508658 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "26"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00003661972"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
483 9 ensembl_havana CDS 508512 508658 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "26"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
484 9 ensembl_havana exon 508754 508853 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "27"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00003475762"; exon_version "1"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
485 9 ensembl_havana CDS 508754 508853 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "27"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
486 9 ensembl_havana exon 512573 514095 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "28"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; exon_id "ENSE00001141354"; exon_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
487 9 ensembl_havana CDS 512573 512820 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "28"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; protein_id "ENSP00000354360"; protein_version "4"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
488 9 ensembl_havana stop_codon 512821 512823 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; exon_number "28"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
489 9 ensembl_havana five_prime_utr 430118 430250 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
490 9 ensembl_havana three_prime_utr 512824 514095 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000361069"; transcript_version "8"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS6938"; tag "basic"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
491 9 havana transcript 430210 513145 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000480883"; transcript_version "1"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
492 9 havana exon 430210 430623 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000480883"; transcript_version "1"; exon_number "1"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001827490"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
493 9 havana exon 447321 447625 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000480883"; transcript_version "1"; exon_number "2"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003654202"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
494 9 havana exon 453081 453211 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000480883"; transcript_version "1"; exon_number "3"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003521322"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
495 9 havana exon 457202 457368 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000480883"; transcript_version "1"; exon_number "4"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003633409"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
496 9 havana exon 459900 460088 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000480883"; transcript_version "1"; exon_number "5"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003653096"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
497 9 havana exon 460167 460284 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000480883"; transcript_version "1"; exon_number "6"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003461378"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
498 9 havana exon 462673 462771 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000480883"; transcript_version "1"; exon_number "7"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003610766"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
499 9 havana exon 466560 466603 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000480883"; transcript_version "1"; exon_number "8"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001822615"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
500 9 havana exon 512710 513145 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000480883"; transcript_version "1"; exon_number "9"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-204"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001893956"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
501 9 havana transcript 500279 515509 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
502 9 havana exon 500279 500334 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "1"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001750717"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
503 9 havana CDS 500279 500334 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "1"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000347627"; protein_version "5"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
504 9 havana exon 503095 503197 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "2"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001369998"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
505 9 havana CDS 503095 503197 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "2"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000347627"; protein_version "5"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
506 9 havana exon 506644 506759 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "3"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001779464"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
507 9 havana CDS 506644 506759 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "3"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000347627"; protein_version "5"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
508 9 havana exon 508512 508658 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "4"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003661972"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
509 9 havana CDS 508512 508658 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "4"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000347627"; protein_version "5"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
510 9 havana exon 508754 508853 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "5"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003475762"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
511 9 havana CDS 508754 508853 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "5"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000347627"; protein_version "5"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
512 9 havana exon 512573 515509 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "6"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001554244"; exon_version "2"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
513 9 havana CDS 512573 512820 . + 2 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "6"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000347627"; protein_version "5"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
514 9 havana stop_codon 512821 512823 . + 0 gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; exon_number "6"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
515 9 havana three_prime_utr 512824 515509 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000355452"; transcript_version "5"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-201"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
516 9 havana transcript 506861 513079 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000462567"; transcript_version "1"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
517 9 havana exon 506861 506907 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000462567"; transcript_version "1"; exon_number "1"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001860261"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
518 9 havana exon 508512 508658 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000462567"; transcript_version "1"; exon_number "2"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003625355"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
519 9 havana exon 508754 508853 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000462567"; transcript_version "1"; exon_number "3"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003666039"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
520 9 havana exon 512573 513079 . + . gene_id "ENSG00000050555"; gene_version "17"; transcript_id "ENST00000462567"; transcript_version "1"; exon_number "4"; gene_name "LAMC3"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "LAMC3-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001829157"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
521 9 ensembl gene 442204 442342 . - . gene_id "ENSG00000252582"; gene_version "1"; gene_name "RF00322"; gene_source "ensembl"; gene_biotype "snoRNA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
522 9 ensembl transcript 442204 442342 . - . gene_id "ENSG00000252582"; gene_version "1"; transcript_id "ENST00000516773"; transcript_version "1"; gene_name "RF00322"; gene_source "ensembl"; gene_biotype "snoRNA"; transcript_name "RF00322.16-201"; transcript_source "ensembl"; transcript_biotype "snoRNA"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
523 9 ensembl exon 442204 442342 . - . gene_id "ENSG00000252582"; gene_version "1"; transcript_id "ENST00000516773"; transcript_version "1"; exon_number "1"; gene_name "RF00322"; gene_source "ensembl"; gene_biotype "snoRNA"; transcript_name "RF00322.16-201"; transcript_source "ensembl"; transcript_biotype "snoRNA"; exon_id "ENSE00002089050"; exon_version "1"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
524 22 ensembl_havana gene 1 85607 . - . gene_id "ENSG00000100218"; gene_version "11"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
525 22 ensembl_havana transcript 1 82679 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
526 22 ensembl_havana exon 82535 82679 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; exon_id "ENSE00001867945"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
527 22 ensembl_havana exon 80808 81058 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; exon_id "ENSE00001154494"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
528 22 ensembl_havana CDS 80808 81006 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; protein_id "ENSP00000216036"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
529 22 ensembl_havana start_codon 81004 81006 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
530 22 ensembl_havana exon 79426 79528 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "3"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; exon_id "ENSE00000651217"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
531 22 ensembl_havana CDS 79426 79528 . - 2 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "3"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; protein_id "ENSP00000216036"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
532 22 ensembl_havana exon 74612 74730 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "4"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; exon_id "ENSE00000651216"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
533 22 ensembl_havana CDS 74612 74730 . - 1 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "4"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; protein_id "ENSP00000216036"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
534 22 ensembl_havana exon 4488 4719 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "5"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; exon_id "ENSE00000651213"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
535 22 ensembl_havana CDS 4488 4719 . - 2 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "5"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; protein_id "ENSP00000216036"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
536 22 ensembl_havana exon 2395 2531 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "6"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; exon_id "ENSE00000651212"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
537 22 ensembl_havana CDS 2395 2531 . - 1 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "6"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; protein_id "ENSP00000216036"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
538 22 ensembl_havana exon 1 304 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "7"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; exon_id "ENSE00001154490"; exon_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
539 22 ensembl_havana CDS 51 304 . - 2 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "7"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; protein_id "ENSP00000216036"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
540 22 ensembl_havana stop_codon 48 50 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; exon_number "7"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
541 22 ensembl_havana five_prime_utr 82535 82679 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
542 22 ensembl_havana five_prime_utr 81007 81058 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
543 22 ensembl_havana three_prime_utr 1 47 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000216036"; transcript_version "8"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13803"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
544 22 havana transcript 64813 74660 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000421213"; transcript_version "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
545 22 havana exon 74612 74660 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000421213"; transcript_version "1"; exon_number "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001750913"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
546 22 havana CDS 74612 74660 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000421213"; transcript_version "1"; exon_number "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000414155"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
547 22 havana exon 64813 65086 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000421213"; transcript_version "1"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001715932"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
548 22 havana CDS 64917 65086 . - 2 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000421213"; transcript_version "1"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000414155"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
549 22 havana stop_codon 64914 64916 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000421213"; transcript_version "1"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
550 22 havana three_prime_utr 64813 64913 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000421213"; transcript_version "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
551 22 havana transcript 71763 79500 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000439064"; transcript_version "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-204"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
552 22 havana exon 79426 79500 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000439064"; transcript_version "1"; exon_number "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001675055"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
553 22 havana CDS 79426 79500 . - 1 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000439064"; transcript_version "1"; exon_number "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000406822"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
554 22 havana exon 74612 74730 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000439064"; transcript_version "1"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651216"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
555 22 havana CDS 74612 74730 . - 1 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000439064"; transcript_version "1"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000406822"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
556 22 havana exon 71763 72263 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000439064"; transcript_version "1"; exon_number "3"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001719366"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
557 22 havana CDS 72259 72263 . - 2 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000439064"; transcript_version "1"; exon_number "3"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000406822"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
558 22 havana stop_codon 72256 72258 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000439064"; transcript_version "1"; exon_number "3"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-204"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
559 22 havana three_prime_utr 71763 72255 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000439064"; transcript_version "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-204"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
560 22 havana transcript 76579 80886 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000452757"; transcript_version "5"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-205"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
561 22 havana exon 80808 80886 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000452757"; transcript_version "5"; exon_number "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-205"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001722383"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
562 22 havana CDS 80808 80886 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000452757"; transcript_version "5"; exon_number "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000391552"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
563 22 havana exon 79426 79528 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000452757"; transcript_version "5"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-205"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651217"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
564 22 havana CDS 79426 79528 . - 2 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000452757"; transcript_version "5"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000391552"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
565 22 havana exon 76579 76905 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000452757"; transcript_version "5"; exon_number "3"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-205"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001664420"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
566 22 havana CDS 76887 76905 . - 1 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000452757"; transcript_version "5"; exon_number "3"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-205"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000391552"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
567 22 havana stop_codon 76884 76886 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000452757"; transcript_version "5"; exon_number "3"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-205"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
568 22 havana three_prime_utr 76579 76883 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000452757"; transcript_version "5"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-205"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
569 22 havana transcript 76784 85607 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
570 22 havana exon 85568 85607 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; exon_number "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001554371"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
571 22 havana exon 80808 81058 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001154494"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
572 22 havana CDS 80808 81006 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000385567"; protein_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
573 22 havana start_codon 81004 81006 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; exon_number "2"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
574 22 havana exon 79426 79528 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; exon_number "3"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651217"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
575 22 havana CDS 79426 79528 . - 2 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; exon_number "3"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000385567"; protein_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
576 22 havana exon 76784 76908 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; exon_number "4"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001558003"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
577 22 havana CDS 76887 76908 . - 1 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; exon_number "4"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000385567"; protein_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
578 22 havana stop_codon 76884 76886 . - 0 gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; exon_number "4"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
579 22 havana five_prime_utr 85568 85607 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
580 22 havana five_prime_utr 81007 81058 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
581 22 havana three_prime_utr 76784 76883 . - . gene_id "ENSG00000100218"; gene_version "11"; transcript_id "ENST00000406876"; transcript_version "1"; gene_name "RSPH14"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RSPH14-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
582 22 ensembl_havana gene 10947 65623 . + . gene_id "ENSG00000128266"; gene_version "8"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
583 22 ensembl_havana transcript 10947 65623 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
584 22 ensembl_havana exon 10947 11156 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; exon_number "1"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; exon_id "ENSE00003734391"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
585 22 ensembl_havana exon 35833 37004 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; exon_number "2"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; exon_id "ENSE00003715424"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
586 22 ensembl_havana CDS 36282 37004 . + 0 gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; exon_number "2"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; protein_id "ENSP00000478892"; protein_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
587 22 ensembl_havana start_codon 36282 36284 . + 0 gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; exon_number "2"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
588 22 ensembl_havana exon 63673 65623 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; exon_number "3"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; exon_id "ENSE00003723794"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
589 22 ensembl_havana CDS 63673 64014 . + 0 gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; exon_number "3"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; protein_id "ENSP00000478892"; protein_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
590 22 ensembl_havana stop_codon 64015 64017 . + 0 gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; exon_number "3"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
591 22 ensembl_havana five_prime_utr 10947 11156 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
592 22 ensembl_havana five_prime_utr 35833 36281 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
593 22 ensembl_havana three_prime_utr 64018 65623 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000615612"; transcript_version "1"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-203"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13804"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
594 22 havana transcript 11160 36302 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000492538"; transcript_version "1"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-202"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
595 22 havana exon 11160 11341 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000492538"; transcript_version "1"; exon_number "1"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-202"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001910025"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
596 22 havana exon 35833 36302 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000492538"; transcript_version "1"; exon_number "2"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-202"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001901305"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
597 22 havana transcript 62964 63928 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000479571"; transcript_version "1"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-201"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
598 22 havana exon 62964 63288 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000479571"; transcript_version "1"; exon_number "1"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-201"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001921804"; exon_version "1"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
599 22 havana exon 63673 63928 . + . gene_id "ENSG00000128266"; gene_version "8"; transcript_id "ENST00000479571"; transcript_version "1"; exon_number "2"; gene_name "GNAZ"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "GNAZ-201"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001830862"; exon_version "1"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
600 22 ensembl gene 73316 73591 . - . gene_id "ENSG00000283438"; gene_version "1"; gene_name "RF00017"; gene_source "ensembl"; gene_biotype "misc_RNA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
601 22 ensembl transcript 73316 73591 . - . gene_id "ENSG00000283438"; gene_version "1"; transcript_id "ENST00000635920"; transcript_version "1"; gene_name "RF00017"; gene_source "ensembl"; gene_biotype "misc_RNA"; transcript_name "RF00017.211-201"; transcript_source "ensembl"; transcript_biotype "misc_RNA"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
602 22 ensembl exon 73316 73591 . - . gene_id "ENSG00000283438"; gene_version "1"; transcript_id "ENST00000635920"; transcript_version "1"; exon_number "1"; gene_name "RF00017"; gene_source "ensembl"; gene_biotype "misc_RNA"; transcript_name "RF00017.211-201"; transcript_source "ensembl"; transcript_biotype "misc_RNA"; exon_id "ENSE00003798476"; exon_version "1"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
603 22 ensembl gene 78391 78450 . - . gene_id "ENSG00000275635"; gene_version "1"; gene_name "RF00066"; gene_source "ensembl"; gene_biotype "snRNA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
604 22 ensembl transcript 78391 78450 . - . gene_id "ENSG00000275635"; gene_version "1"; transcript_id "ENST00000459276"; transcript_version "2"; gene_name "RF00066"; gene_source "ensembl"; gene_biotype "snRNA"; transcript_name "RF00066.7-201"; transcript_source "ensembl"; transcript_biotype "snRNA"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
605 22 ensembl exon 78391 78450 . - . gene_id "ENSG00000275635"; gene_version "1"; transcript_id "ENST00000459276"; transcript_version "2"; exon_number "1"; gene_name "RF00066"; gene_source "ensembl"; gene_biotype "snRNA"; transcript_name "RF00066.7-201"; transcript_source "ensembl"; transcript_biotype "snRNA"; exon_id "ENSE00001809045"; exon_version "2"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
606 22 ensembl_havana gene 85912 104936 . + . gene_id "ENSG00000100228"; gene_version "12"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
607 22 ensembl_havana transcript 85912 104936 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
608 22 ensembl_havana exon 85912 86137 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "1"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00000879414"; exon_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
609 22 ensembl_havana CDS 85952 86137 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "1"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
610 22 ensembl_havana start_codon 85952 85954 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "1"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
611 22 ensembl_havana exon 87191 87271 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "2"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00000651221"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
612 22 ensembl_havana CDS 87191 87271 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "2"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
613 22 ensembl_havana exon 90649 90740 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "3"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00000651223"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
614 22 ensembl_havana CDS 90649 90740 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "3"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
615 22 ensembl_havana exon 93047 93112 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "4"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00000651225"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
616 22 ensembl_havana CDS 93047 93112 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "4"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
617 22 ensembl_havana exon 93619 93720 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "5"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00000651226"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
618 22 ensembl_havana CDS 93619 93720 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "5"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
619 22 ensembl_havana exon 96554 96618 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "6"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00000651228"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
620 22 ensembl_havana CDS 96554 96618 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "6"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
621 22 ensembl_havana exon 98578 98629 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "7"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00000651231"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
622 22 ensembl_havana CDS 98578 98629 . + 2 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "7"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
623 22 ensembl_havana exon 99484 99565 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "8"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00000651232"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
624 22 ensembl_havana CDS 99484 99565 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "8"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
625 22 ensembl_havana exon 99749 99839 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "9"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00000651234"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
626 22 ensembl_havana CDS 99749 99839 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "9"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
627 22 ensembl_havana exon 101465 101584 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "10"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00000651236"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
628 22 ensembl_havana CDS 101465 101584 . + 2 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "10"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
629 22 ensembl_havana exon 102086 104936 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "11"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; exon_id "ENSE00001386696"; exon_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
630 22 ensembl_havana CDS 102086 102147 . + 2 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "11"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; protein_id "ENSP00000263116"; protein_version "2"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
631 22 ensembl_havana stop_codon 102148 102150 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; exon_number "11"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
632 22 ensembl_havana five_prime_utr 85912 85951 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
633 22 ensembl_havana three_prime_utr 102151 104936 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000263116"; transcript_version "6"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13805"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
634 22 ensembl_havana transcript 85952 102150 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
635 22 ensembl_havana exon 85952 86137 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "1"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001867110"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
636 22 ensembl_havana CDS 85952 86137 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "1"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000343494"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
637 22 ensembl_havana start_codon 85952 85954 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "1"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
638 22 ensembl_havana exon 87191 87271 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "2"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651221"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
639 22 ensembl_havana CDS 87191 87271 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "2"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000343494"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
640 22 ensembl_havana exon 90649 90740 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "3"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651223"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
641 22 ensembl_havana CDS 90649 90740 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "3"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000343494"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
642 22 ensembl_havana exon 93619 93720 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "4"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651226"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
643 22 ensembl_havana CDS 93619 93720 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "4"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000343494"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
644 22 ensembl_havana exon 96554 96618 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "5"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651228"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
645 22 ensembl_havana CDS 96554 96618 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "5"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000343494"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
646 22 ensembl_havana exon 98578 98629 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "6"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651231"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
647 22 ensembl_havana CDS 98578 98629 . + 2 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "6"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000343494"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
648 22 ensembl_havana exon 99484 99565 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "7"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651232"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
649 22 ensembl_havana CDS 99484 99565 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "7"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000343494"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
650 22 ensembl_havana exon 99749 99839 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "8"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651234"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
651 22 ensembl_havana CDS 99749 99839 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "8"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000343494"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
652 22 ensembl_havana exon 101465 101584 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "9"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651236"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
653 22 ensembl_havana CDS 101465 101584 . + 2 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "9"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000343494"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
654 22 ensembl_havana exon 102086 102150 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "10"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001891222"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
655 22 ensembl_havana CDS 102086 102147 . + 2 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "10"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000343494"; protein_version "4"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
656 22 ensembl_havana stop_codon 102148 102150 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000341989"; transcript_version "8"; exon_number "10"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-202"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
657 22 havana transcript 90699 96897 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
658 22 havana exon 90699 90740 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; exon_number "1"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001783318"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
659 22 havana CDS 90699 90740 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; exon_number "1"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397594"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
660 22 havana exon 93047 93112 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; exon_number "2"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651225"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
661 22 havana CDS 93047 93112 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; exon_number "2"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397594"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
662 22 havana exon 93619 93720 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; exon_number "3"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00000651226"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
663 22 havana CDS 93619 93720 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; exon_number "3"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397594"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
664 22 havana exon 96554 96897 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; exon_number "4"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001604325"; exon_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
665 22 havana CDS 96554 96737 . + 1 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; exon_number "4"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000397594"; protein_version "1"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
666 22 havana stop_codon 96738 96740 . + 0 gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; exon_number "4"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
667 22 havana three_prime_utr 96741 96897 . + . gene_id "ENSG00000100228"; gene_version "12"; transcript_id "ENST00000420895"; transcript_version "1"; gene_name "RAB36"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "RAB36-203"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_start_NF"; tag "mRNA_start_NF"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
668 22 ensembl_havana gene 120290 258623 . + . gene_id "ENSG00000186716"; gene_version "20"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
669 22 havana transcript 120290 202014 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000479188"; transcript_version "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-212"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
670 22 havana exon 120290 120418 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000479188"; transcript_version "5"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-212"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001885565"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
671 22 havana exon 183404 183571 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000479188"; transcript_version "5"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-212"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001888232"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
672 22 havana exon 194385 194566 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000479188"; transcript_version "5"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-212"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003532721"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
673 22 havana exon 201536 201640 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000479188"; transcript_version "5"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-212"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003663533"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
674 22 havana exon 201941 202014 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000479188"; transcript_version "5"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-212"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001809323"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
675 22 ensembl_havana transcript 120796 258623 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
676 22 ensembl_havana exon 120796 122825 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00001897802"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
677 22 ensembl_havana CDS 121547 122825 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
678 22 ensembl_havana start_codon 121547 121549 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
679 22 ensembl_havana exon 194385 194566 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003561884"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
680 22 ensembl_havana CDS 194385 194566 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
681 22 ensembl_havana exon 201536 201640 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003517761"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
682 22 ensembl_havana CDS 201536 201640 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
683 22 ensembl_havana exon 201941 202126 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00001658624"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
684 22 ensembl_havana CDS 201941 202126 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
685 22 ensembl_havana exon 208994 209101 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00001154392"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
686 22 ensembl_havana CDS 208994 209101 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
687 22 ensembl_havana exon 212118 212178 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "6"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00001801315"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
688 22 ensembl_havana CDS 212118 212178 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "6"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
689 22 ensembl_havana exon 213667 213719 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "7"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00001689593"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
690 22 ensembl_havana CDS 213667 213719 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "7"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
691 22 ensembl_havana exon 214220 214360 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "8"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00001755753"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
692 22 ensembl_havana CDS 214220 214360 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "8"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
693 22 ensembl_havana exon 224563 224684 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "9"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00001616269"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
694 22 ensembl_havana CDS 224563 224684 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "9"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
695 22 ensembl_havana exon 225619 225787 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "10"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003495342"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
696 22 ensembl_havana CDS 225619 225787 . + 1 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "10"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
697 22 ensembl_havana exon 227745 227864 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "11"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003484066"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
698 22 ensembl_havana CDS 227745 227864 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "11"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
699 22 ensembl_havana exon 228683 228758 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "12"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003610811"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
700 22 ensembl_havana CDS 228683 228758 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "12"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
701 22 ensembl_havana exon 230103 230207 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "13"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00001654687"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
702 22 ensembl_havana CDS 230103 230207 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "13"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
703 22 ensembl_havana exon 230925 230999 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "14"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00001781765"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
704 22 ensembl_havana CDS 230925 230999 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "14"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
705 22 ensembl_havana exon 233127 233224 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "15"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003524316"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
706 22 ensembl_havana CDS 233127 233224 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "15"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
707 22 ensembl_havana exon 235610 235741 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "16"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003496602"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
708 22 ensembl_havana CDS 235610 235741 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "16"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
709 22 ensembl_havana exon 250010 250069 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "17"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003648666"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
710 22 ensembl_havana CDS 250010 250069 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "17"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
711 22 ensembl_havana exon 250910 251019 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "18"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003599139"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
712 22 ensembl_havana CDS 250910 251019 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "18"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
713 22 ensembl_havana exon 252283 252422 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "19"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003540236"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
714 22 ensembl_havana CDS 252283 252422 . + 1 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "19"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
715 22 ensembl_havana exon 253473 253607 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "20"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003562142"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
716 22 ensembl_havana CDS 253473 253607 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "20"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
717 22 ensembl_havana exon 254554 254659 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "21"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003668832"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
718 22 ensembl_havana CDS 254554 254659 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "21"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
719 22 ensembl_havana exon 255138 255300 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "22"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00003500461"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
720 22 ensembl_havana CDS 255138 255300 . + 1 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "22"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
721 22 ensembl_havana exon 256019 258623 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "23"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; exon_id "ENSE00001753733"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
722 22 ensembl_havana CDS 256019 256105 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "23"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; protein_id "ENSP00000303507"; protein_version "8"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
723 22 ensembl_havana stop_codon 256106 256108 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; exon_number "23"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
724 22 ensembl_havana five_prime_utr 120796 121546 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
725 22 ensembl_havana three_prime_utr 256109 258623 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000305877"; transcript_version "12"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-201"; transcript_source "ensembl_havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13806"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
726 22 havana transcript 120951 256536 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
727 22 havana exon 120951 122825 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00001380753"; exon_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
728 22 havana CDS 121547 122825 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
729 22 havana start_codon 121547 121549 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
730 22 havana exon 194385 194566 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003561884"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
731 22 havana CDS 194385 194566 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
732 22 havana exon 201536 201640 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003517761"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
733 22 havana CDS 201536 201640 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
734 22 havana exon 201941 202126 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00001658624"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
735 22 havana CDS 201941 202126 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
736 22 havana exon 208994 209101 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00001154392"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
737 22 havana CDS 208994 209101 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
738 22 havana exon 212118 212178 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "6"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00001801315"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
739 22 havana CDS 212118 212178 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "6"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
740 22 havana exon 213667 213719 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "7"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00001689593"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
741 22 havana CDS 213667 213719 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "7"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
742 22 havana exon 214220 214360 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "8"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00001755753"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
743 22 havana CDS 214220 214360 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "8"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
744 22 havana exon 224563 224684 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "9"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00001616269"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
745 22 havana CDS 224563 224684 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "9"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
746 22 havana exon 225619 225787 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "10"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003495342"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
747 22 havana CDS 225619 225787 . + 1 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "10"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
748 22 havana exon 227745 227864 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "11"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003484066"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
749 22 havana CDS 227745 227864 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "11"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
750 22 havana exon 228683 228758 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "12"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003610811"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
751 22 havana CDS 228683 228758 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "12"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
752 22 havana exon 230103 230207 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "13"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00001654687"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
753 22 havana CDS 230103 230207 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "13"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
754 22 havana exon 230925 230999 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "14"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00001781765"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
755 22 havana CDS 230925 230999 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "14"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
756 22 havana exon 233127 233224 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "15"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003524316"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
757 22 havana CDS 233127 233224 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "15"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
758 22 havana exon 250010 250069 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "16"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003648666"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
759 22 havana CDS 250010 250069 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "16"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
760 22 havana exon 250910 251019 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "17"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003599139"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
761 22 havana CDS 250910 251019 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "17"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
762 22 havana exon 252283 252422 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "18"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003540236"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
763 22 havana CDS 252283 252422 . + 1 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "18"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
764 22 havana exon 253473 253607 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "19"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003562142"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
765 22 havana CDS 253473 253607 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "19"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
766 22 havana exon 254554 254659 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "20"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003668832"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
767 22 havana CDS 254554 254659 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "20"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
768 22 havana exon 255138 255300 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "21"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00003500461"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
769 22 havana CDS 255138 255300 . + 1 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "21"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
770 22 havana exon 256019 256536 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "22"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; exon_id "ENSE00002130588"; exon_version "1"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
771 22 havana CDS 256019 256105 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "22"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; protein_id "ENSP00000352535"; protein_version "3"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
772 22 havana stop_codon 256106 256108 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; exon_number "22"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
773 22 havana five_prime_utr 120951 121546 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
774 22 havana three_prime_utr 256109 256536 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000359540"; transcript_version "7"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-202"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "CCDS"; ccds_id "CCDS13807"; tag "basic"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
775 22 havana transcript 138839 194419 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000463770"; transcript_version "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
776 22 havana exon 138839 138971 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000463770"; transcript_version "5"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001895428"; exon_version "1"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
777 22 havana exon 194385 194419 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000463770"; transcript_version "5"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-207"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001870081"; exon_version "1"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
778 22 havana transcript 138918 194419 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000487679"; transcript_version "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-214"; transcript_source "havana"; transcript_biotype "processed_transcript"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
779 22 havana exon 138918 138971 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000487679"; transcript_version "1"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-214"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001835862"; exon_version "1"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
780 22 havana exon 139797 139938 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000487679"; transcript_version "1"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-214"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001913969"; exon_version "1"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
781 22 havana exon 194385 194419 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000487679"; transcript_version "1"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-214"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001870081"; exon_version "1"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
782 22 havana transcript 191618 201979 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000480973"; transcript_version "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-213"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
783 22 havana exon 191618 191826 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000480973"; transcript_version "1"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-213"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001906681"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
784 22 havana exon 194385 194566 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000480973"; transcript_version "1"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-213"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003532721"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
785 22 havana exon 201536 201640 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000480973"; transcript_version "1"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-213"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003663533"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
786 22 havana exon 201941 201979 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000480973"; transcript_version "1"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-213"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001811951"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
787 22 havana transcript 194546 225700 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
788 22 havana exon 194546 194566 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001622234"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
789 22 havana CDS 194546 194566 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000396531"; protein_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
790 22 havana exon 201536 201640 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00003517761"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
791 22 havana CDS 201536 201640 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000396531"; protein_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
792 22 havana exon 201941 202126 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001658624"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
793 22 havana CDS 201941 202126 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000396531"; protein_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
794 22 havana exon 212118 212178 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001801315"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
795 22 havana CDS 212118 212178 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000396531"; protein_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
796 22 havana exon 213667 213719 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001689593"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
797 22 havana CDS 213667 213719 . + 2 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000396531"; protein_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
798 22 havana exon 214220 214360 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "6"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001755753"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
799 22 havana CDS 214220 214360 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "6"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000396531"; protein_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
800 22 havana exon 224563 224684 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "7"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001616269"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
801 22 havana CDS 224563 224684 . + 0 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "7"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000396531"; protein_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
802 22 havana exon 225619 225700 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "8"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; exon_id "ENSE00001759065"; exon_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
803 22 havana CDS 225619 225700 . + 1 gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000427791"; transcript_version "1"; exon_number "8"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-204"; transcript_source "havana"; transcript_biotype "protein_coding"; protein_id "ENSP00000396531"; protein_version "1"; tag "cds_end_NF"; tag "cds_start_NF"; tag "mRNA_end_NF"; tag "mRNA_start_NF"; transcript_support_level "1";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
804 22 havana transcript 223795 231717 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000487968"; transcript_version "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-215"; transcript_source "havana"; transcript_biotype "retained_intron"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
805 22 havana exon 223795 224684 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000487968"; transcript_version "5"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-215"; transcript_source "havana"; transcript_biotype "retained_intron"; exon_id "ENSE00001946900"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
806 22 havana exon 225619 225787 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000487968"; transcript_version "5"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-215"; transcript_source "havana"; transcript_biotype "retained_intron"; exon_id "ENSE00003616233"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
807 22 havana exon 227745 227864 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000487968"; transcript_version "5"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-215"; transcript_source "havana"; transcript_biotype "retained_intron"; exon_id "ENSE00003604191"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
808 22 havana exon 228683 228758 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000487968"; transcript_version "5"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-215"; transcript_source "havana"; transcript_biotype "retained_intron"; exon_id "ENSE00003595896"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
809 22 havana exon 230103 231717 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000487968"; transcript_version "5"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-215"; transcript_source "havana"; transcript_biotype "retained_intron"; exon_id "ENSE00001904438"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
810 22 havana transcript 224374 227759 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000466076"; transcript_version "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-208"; transcript_source "havana"; transcript_biotype "retained_intron"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
811 22 havana exon 224374 224684 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000466076"; transcript_version "1"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-208"; transcript_source "havana"; transcript_biotype "retained_intron"; exon_id "ENSE00001949240"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
812 22 havana exon 225619 225787 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000466076"; transcript_version "1"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-208"; transcript_source "havana"; transcript_biotype "retained_intron"; exon_id "ENSE00003616233"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
813 22 havana exon 227745 227759 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000466076"; transcript_version "1"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-208"; transcript_source "havana"; transcript_biotype "retained_intron"; exon_id "ENSE00001894140"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
814 22 havana transcript 230201 251019 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000419722"; transcript_version "6"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
815 22 havana exon 230201 230207 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000419722"; transcript_version "6"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001809529"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
816 22 havana exon 233127 233224 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000419722"; transcript_version "6"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003624154"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
817 22 havana exon 235610 235741 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000419722"; transcript_version "6"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003590749"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
818 22 havana exon 250010 250069 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000419722"; transcript_version "6"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003679653"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
819 22 havana exon 250529 251019 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000419722"; transcript_version "6"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-203"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001724461"; exon_version "2"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
820 22 havana transcript 235627 243449 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000471452"; transcript_version "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-209"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
821 22 havana exon 235627 235741 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000471452"; transcript_version "1"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-209"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001847826"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
822 22 havana exon 242927 243449 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000471452"; transcript_version "1"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-209"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001816801"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
823 22 havana transcript 246740 251019 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000478978"; transcript_version "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-211"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
824 22 havana exon 246740 246835 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000478978"; transcript_version "5"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-211"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001826929"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
825 22 havana exon 248154 248350 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000478978"; transcript_version "5"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-211"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001909580"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
826 22 havana exon 250010 250069 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000478978"; transcript_version "5"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-211"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003679653"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
827 22 havana exon 250910 251019 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000478978"; transcript_version "5"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-211"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003683299"; exon_version "1"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
828 22 havana transcript 247331 254585 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000475025"; transcript_version "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-210"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
829 22 havana exon 247331 247416 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000475025"; transcript_version "5"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-210"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001893883"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
830 22 havana exon 250010 250069 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000475025"; transcript_version "5"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-210"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003679653"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
831 22 havana exon 250910 251019 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000475025"; transcript_version "5"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-210"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003683299"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
832 22 havana exon 252283 252422 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000475025"; transcript_version "5"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-210"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003491322"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
833 22 havana exon 253473 253607 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000475025"; transcript_version "5"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-210"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003640961"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
834 22 havana exon 254554 254585 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000475025"; transcript_version "5"; exon_number "6"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-210"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001937182"; exon_version "1"; transcript_support_level "4";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
835 22 havana transcript 250060 258620 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000436990"; transcript_version "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
836 22 havana exon 250060 251019 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000436990"; transcript_version "2"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001841470"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
837 22 havana exon 252283 252504 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000436990"; transcript_version "2"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001765089"; exon_version "2"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
838 22 havana exon 253473 253607 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000436990"; transcript_version "2"; exon_number "3"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003640961"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
839 22 havana exon 254554 254659 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000436990"; transcript_version "2"; exon_number "4"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003629852"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
840 22 havana exon 255138 255300 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000436990"; transcript_version "2"; exon_number "5"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00003624608"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
841 22 havana exon 256019 258620 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000436990"; transcript_version "2"; exon_number "6"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-205"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001955796"; exon_version "1"; transcript_support_level "2";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
842 22 havana transcript 252974 255281 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000458056"; transcript_version "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
843 22 havana exon 252974 253607 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000458056"; transcript_version "2"; exon_number "1"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001911552"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
844 22 havana exon 255138 255281 . + . gene_id "ENSG00000186716"; gene_version "20"; transcript_id "ENST00000458056"; transcript_version "2"; exon_number "2"; gene_name "BCR"; gene_source "ensembl_havana"; gene_biotype "protein_coding"; transcript_name "BCR-206"; transcript_source "havana"; transcript_biotype "processed_transcript"; exon_id "ENSE00001886337"; exon_version "1"; transcript_support_level "5";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
845 22 havana gene 120504 120758 . - . gene_id "ENSG00000236794"; gene_version "5"; gene_name "BCRP8"; gene_source "havana"; gene_biotype "processed_pseudogene";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
846 22 havana transcript 120504 120758 . - . gene_id "ENSG00000236794"; gene_version "5"; transcript_id "ENST00000412037"; transcript_version "2"; gene_name "BCRP8"; gene_source "havana"; gene_biotype "processed_pseudogene"; transcript_name "BCRP8-201"; transcript_source "havana"; transcript_biotype "processed_pseudogene"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
847 22 havana exon 120504 120758 . - . gene_id "ENSG00000236794"; gene_version "5"; transcript_id "ENST00000412037"; transcript_version "2"; exon_number "1"; gene_name "BCRP8"; gene_source "havana"; gene_biotype "processed_pseudogene"; transcript_name "BCRP8-201"; transcript_source "havana"; transcript_biotype "processed_pseudogene"; exon_id "ENSE00001762917"; exon_version "2"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
848 22 ensembl gene 202368 202657 . - . gene_id "ENSG00000240160"; gene_version "3"; gene_name "RN7SL263P"; gene_source "ensembl"; gene_biotype "misc_RNA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
849 22 ensembl transcript 202368 202657 . - . gene_id "ENSG00000240160"; gene_version "3"; transcript_id "ENST00000467969"; transcript_version "3"; gene_name "RN7SL263P"; gene_source "ensembl"; gene_biotype "misc_RNA"; transcript_name "RN7SL263P-201"; transcript_source "ensembl"; transcript_biotype "misc_RNA"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
850 22 ensembl exon 202368 202657 . - . gene_id "ENSG00000240160"; gene_version "3"; transcript_id "ENST00000467969"; transcript_version "3"; exon_number "1"; gene_name "RN7SL263P"; gene_source "ensembl"; gene_biotype "misc_RNA"; transcript_name "RN7SL263P-201"; transcript_source "ensembl"; transcript_biotype "misc_RNA"; exon_id "ENSE00001875334"; exon_version "3"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
851 22 havana gene 203353 205591 . + . gene_id "ENSG00000230701"; gene_version "2"; gene_name "FBXW4P1"; gene_source "havana"; gene_biotype "processed_pseudogene";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
852 22 havana transcript 203353 205591 . + . gene_id "ENSG00000230701"; gene_version "2"; transcript_id "ENST00000426721"; transcript_version "2"; gene_name "FBXW4P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; transcript_name "FBXW4P1-201"; transcript_source "havana"; transcript_biotype "processed_pseudogene"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
853 22 havana exon 203353 205591 . + . gene_id "ENSG00000230701"; gene_version "2"; transcript_id "ENST00000426721"; transcript_version "2"; exon_number "1"; gene_name "FBXW4P1"; gene_source "havana"; gene_biotype "processed_pseudogene"; transcript_name "FBXW4P1-201"; transcript_source "havana"; transcript_biotype "processed_pseudogene"; exon_id "ENSE00001782951"; exon_version "2"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
854 22 havana gene 263129 263513 . - . gene_id "ENSG00000214526"; gene_version "3"; gene_name "AP000343.1"; gene_source "havana"; gene_biotype "processed_pseudogene";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
855 22 havana transcript 263129 263513 . - . gene_id "ENSG00000214526"; gene_version "3"; transcript_id "ENST00000440602"; transcript_version "1"; gene_name "AP000343.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; transcript_name "AP000343.1-201"; transcript_source "havana"; transcript_biotype "processed_pseudogene"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
856 22 havana exon 263129 263513 . - . gene_id "ENSG00000214526"; gene_version "3"; transcript_id "ENST00000440602"; transcript_version "1"; exon_number "1"; gene_name "AP000343.1"; gene_source "havana"; gene_biotype "processed_pseudogene"; transcript_name "AP000343.1-201"; transcript_source "havana"; transcript_biotype "processed_pseudogene"; exon_id "ENSE00001526946"; exon_version "2"; tag "basic"; transcript_support_level "NA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
857 22 havana gene 267202 269079 . + . gene_id "ENSG00000236611"; gene_version "1"; gene_name "LINC02556"; gene_source "havana"; gene_biotype "lincRNA";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
858 22 havana transcript 267202 269079 . + . gene_id "ENSG00000236611"; gene_version "1"; transcript_id "ENST00000450776"; transcript_version "1"; gene_name "LINC02556"; gene_source "havana"; gene_biotype "lincRNA"; transcript_name "LINC02556-201"; transcript_source "havana"; transcript_biotype "lincRNA"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
859 22 havana exon 267202 267377 . + . gene_id "ENSG00000236611"; gene_version "1"; transcript_id "ENST00000450776"; transcript_version "1"; exon_number "1"; gene_name "LINC02556"; gene_source "havana"; gene_biotype "lincRNA"; transcript_name "LINC02556-201"; transcript_source "havana"; transcript_biotype "lincRNA"; exon_id "ENSE00001785308"; exon_version "1"; tag "basic"; transcript_support_level "3";
77021ad5037d "planemo upload for repository https://github.com/jj-umn/tools-iuc/tree/arriba/tools/arriba commit 5a62e8a2ec56a8ce00f89c8fbe61b3f1dffbbffd"
jjohnson
parents:
diff changeset
860 22 havana exon 268910 269079 . + . gene_id "ENSG00000236611"; gene_version "1"; transcript_id "ENST00000450776"; transcript_version "1"; exon_number "2"; gene_name "LINC02556"; gene_source "havana"; gene_biotype "lincRNA"; transcript_name "LINC02556-201"; transcript_source "havana"; transcript_biotype "lincRNA"; exon_id "ENSE00001710203"; exon_version "1"; tag "basic"; transcript_support_level "3";