Mercurial > repos > jjohnson > contig_annotation_tool

annotate test-data/genome3.fna @ 0:ad7507073c3f draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
author jjohnson
date Sun, 24 Nov 2019 21:56:00 -0500
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0
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
jjohnson
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1 >contig_4003
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
jjohnson
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2 ATCAAAGAGGAACTGAAGGCGGCGATGCTGCTGACCGGTTCCTCTGACATAAGAGAGCTCTCTGATGCAGAGTATATCGTCATGGGAGAGACACGCAAAT
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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3 GGATGGAAGGCCTGAAATGACCGACGTCAAGAAGATATTGAAACAGATGTCCGACGAGCTGAGCAAGCCGATCGAATCATACATAGAAGACGAACTGCCC
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
jjohnson
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4 GCCAATCTCATCGAAGCGGCAAGACAGTACCCCTATGCCGGCGGAAAGAGGATGAGACCGGCCATGGTCATCGCCGCGTGCAGGGCGGTGGGAGGGGATG
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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5 GCAGGAAGGCCGTTCCCCTTGCGGTTGCCATAGAGTACATACACAATTTCACGCTGATCCATGATGACCTCATGGACGGGGACGAGAAGNNNNNNNNNNN
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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6 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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7 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCATGGACGGGGACGAGAAGCGCC
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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8 GGGGCATGACCACATCCCATGTGAAGTACGGCATGCCCACAGCGGTGTTGGCGGGAGATGCCCTGTTCGCTAAGGCCTTCCAGATAATCGCCGACCTCGA
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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9 TGCGGACGGCGAAACGGTCAGAGATGTCCTTAGAGTGGTCTCCCAATCCGTCTGGGACCTGGCCAGAGGTCAGCAGATGGATATAAACAACGAGAACGGG
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
jjohnson
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10 ACCGAGGTCACCATGGATGAGTACATCGAGACCATCAGACTGAAGACCAGCGTTCTGTTCGCCGCCGGTGCCGCCGGAGGCGCTATGATCGGAGGTGCGA
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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11 GCAAGGAGGTCGTGGACGCCGTCCACGGCTACGCCATGAACCTGGGCGTCGCCTTCCAGATGTATGACGATATACTTGGGATAGTCGGGGACCCGGCCGT
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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12 TACCGGTAAATCGTCCGGTAATGACATTCGCAAAGGGAAGAGCACCGTCATCGTGTGCCACGCCCTGAAGAACATAGCTGACAGGGCGGACCTGCTGGTC
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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13 TTCCGCGATATCCTCGGCAAGACAGACGCCACCGATGCGGAGATAGACGAGGTCAGGAGCATACTCCGAAGAGCCTGCAGCCTGGATTACGCCATAGAGA
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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14 CCGCAGAGGATTACATCAACAAAGCCGTCGACTGCCTGGATGCGCTGGAGCCCTCAAAGGACAAGGACTTCATGATAGCCCTGGCAGAATACACGATGAC
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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15 CAGGACCCTTTAGTCGGAGATCCCCTTCTCCGTTATGGAGTATGTGGCTTTCCGGCCTTCCGGTATGCTGCGGTGCTTGACCATGATCGCGGCCCTGCGG
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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16 CCGTTGCCTTTCTTCTCCAAGCGGATTATGGTCTTCGCGTTATGATGCATGGCGTGGCCTCCGAGGAACTCTATCGTACCGGCGCCTATGTTGGTGTATA
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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17
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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18 >contig_4403
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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19 CACCGGTCACCCGAAGGTCACGCGCGTATCGATGCGTGACATCGCAGACCTGGGAGAGAGGGGCCTGTACATCCTTCACGAGATCGGTACGGACCTCGTC
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
jjohnson
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20 GGCAAGATGGAGGGCTGCACCGGGTGCAAGAAGTGCGAGCACGAATGCCCCGAGAACGCGTTGACCGTAAGCAAGGACAAGACGATCACCGTGAAGACCA
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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21 AGAACTGCCTCGGAACGGCATGCTACAGATGCCAGTACGTCTGTCCCGAGAAGGTCATGCAGTTCGACTCCCTAAGGCTGTCGTGATAAACGGTTTTGGG
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
jjohnson
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22 CGGGGCCGGCCCCGCCCTTTTTTCATTTACCGCCGTTCAGGGCCTCGGCGTGCACGGCAGGCCTGACATTCTCGTCCTCCAGCTCCGTAAGTATCTGCTT
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
jjohnson
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23 GCGCAGCCTGATGAACTCGGGCGAAGCGCGGTCCCTGGGCCGCGGAATGCCTATGTCCACGATGTCCTTGATGCTGGCAGGACGCTTGGTAAGGACGACT
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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24 ATCCTGTCTGAAAGATAAACGGCCTCGTCGACCGAGTGGGTCACGAACAGGATCGTAGTGTCCGTCTTCTCGACTATCCTCAGCAGCTCGCCCTGCATGA
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
jjohnson
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25 TGTTGCGCGTCTGGGCGTCCAACGCGCCGAACGGCTCGTCCATGAGCAGCACGTCGGGCTTGGTAACAAGGGCCCTTGCGATGCCCACGCGCTGCTTCAT
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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26 ACCTCCGCTGAGCTCGTGGACACGATGGTCCTCGAAACCTTCGAGGCCGACCGCCCTGATGTAGCGTTCGGCGGTCTTCCTGCGCTGCTCCGCCGGGACG
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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27 CCGGCGATCTCCAGGCCGAACTCGACATTCTTCCTTACAGAACGCCAAGGGAACAGTGCGAACTCCTGGAACACCATGCCTCTGTCGGGGCCTGGCCCGG
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
jjohnson
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28 TGCACTTCTTCCCGCCTATCGACACTTCTCCGGAGGACGGCTCCATGAGCCCTGCTATAAGCCTGAGCAGAGTCGTCTTTCCGCATCCCGAGGGACCGAC
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
jjohnson
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29 TATGGATATAAGCTCGCCCTTCTGGATCTCCAGAGAGAAATCCTCCAGGGCCACGGTCTCCTGTTCATCGGTCTTGTAGACCTTCCTCAGATGATTGATA
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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30 ACGATCTTCTCGCTCATTCTATCCCCATCCTTCTTGTTATGACCTTGTGCAGATAGTCGGCGAGGCTGGTCGTCAGTATTCCGAGGATTGCGATTATGAC
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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31 TATGCCCGCGTAGACGTTGGGCCAGTACCCCATCTGCGCCTGTATGCTGATGAAGTATCCGACGCCTCCTCCGAACGATGCGTACAGCTCGGAGGCAACT
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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32 ATGCACATCCACCCGACCCCCATGCCTATGCGGAGGCCGTTCATTATGTATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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33
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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34 >contig_14302
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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35 GATGTGGAATGCGGCCAAATGCCGCCTCGGTTTCAGCGGGGCAAGGCGTTCCATGTCCACGACCGCTGGAATACTGGTGAACGTTTTCATTACTTCTCTG
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36 GAGATAGCCGAACGTTCTCAGCCTGCGCTCGAAAGCAGGAACTACAACGGCAGTTTCCCCATTTATAGGATGCCCAACAAGATCGGTCTCTACTGGTTCG
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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37 CCATCACGGCCGCCGCGTGCGCCTCGCTATACATCATCGGATACTACATCTCGACCCCGAACATGGCGGCAATACTCCTGGGGGCGGTCTGACGGTCTGC
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38 GACCTTCGTACGGATAAAGTGAGCTACAGGTACGGCAATTCGAATTACAATGCTATCGATTCTGTGGATTTCACAGCCTCCCATGGCAGAAGGACCGTCA
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39 TCCTGGGAGAGAACGGGTGCGGCAAGTCGACGCTGATATATCAGCTCAACGGAGTATACAAGCCTGTTTCCGGTACTGTGTTCTATGGAGATATGCCCAT
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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40 ATCATACGACAAGGAGTTCCTTACGGAGCTGCGTTCCGACGTTTCCGTTGTTCTGCAGAATCCAGACGATCAGATTTTCTCTTCCACCGTCGAGGAGGAC
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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41 GTGGCATTTGGACCGTTAAACTTGGGCCTTTCCCGGGAAGAGGTTGGAGAAAGAATCGGCCGGTCTTTGGAATGCGTGGGGATGTCGGGATTTGCCGAAG
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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42 TGCCTGTTCAGCGCCTTTCATACGGTCAGAAAAAAAGAGTGTCACTCGCAGGCGCCCTAGCATCACATCCAAAGATACTGGTCCTGGACGAGCCTACCGC
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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43 AGGCCTGGACCCGCAGATGTCCAGAGAGGTGATGGAGATCGCAAATTCTCTCATCAGAGAAGGGATCTCCGTCGTAGTATCCACCCATGACGTGAATCTG
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44 ATCTACAATTGGGTCGAGGACCTTTACGTGATGCGGAACGGACACATGGTCTTCTCCGGAGATGCGGACGAGTTCTTCTCCGACCGTCCGTCCGTTTATC
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45 TTTCAGGTCTGGAACAGCCCTCGATATTCAGCATAAACCACAATATGGAGACGTTAAGAGGGACGATTCCCGCGTCATATCCCAAGACCATGAGCCAGAT
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46 GGTCAGCAGATTATTCCCTTCAGGATCCTCGGCCGGAAGGATATTCATCTATCAGACTGAAGGCGAGCGCATCGACCAGGATGCGATCGAGGAGGCCGTG
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47 GGAAAGAAAGGGATGCCCATTGCAGTATACGGCCCCTCCGCGCGCAGGTCGGTGACCCGATCGAAGCTCAGGGTTGATTTCTATTTTAACGGCATAGAGT
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48 GTTGCATCAGGGAGGCCATGGTAAACCATGATTCCCTGATAATAGTCGACCGGGGCTTGAAGGGGATCGTCACGGAGGCGATTGAAGAGCTTAGGGCATA
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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49 CGGAACCCGGATCAGTATCAGGGAGTTGGTTTTTTGAGCGCTCCCCTTTTCCGCACCGAAGGTCTTTTCTTCAGATACGAAGGCGGCCGGGGGGACGCGT
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50 TGGCAGACGTGAACATCACGATCAAAGAGGGTGCCAGAACTGTCATCATGGGAGCCAACGGAGCTGGAAAATCCACGTTCTTCTATCATCTTAACGGAGT
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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51 CTTGAGGCCGTCGAAGGGCTCGGTGTTTTTCCGGGGAGAAAAAATACCGCACAGGGGAAAAGCTCTCAGGAAGCTGCGCTCGGAGGTCGCGGTGATGCTC
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52 CAAGACCCCAACGACCAGCTTTTTGCACCAAAAGTATCTGACGACATAGCATTCGGCCCGAAGAACCTGGGACTCGACGCTCAGACTGTAGGGGAGAGGG
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53 TCAGGGACGCCCTCTACATCACAGGCATCGAATCTCTGGAGGGTCGCAGCGTGATGCAGCTGTCGTTCGGCCAGAAGAAGAGGGTGGTGCTGGCCGGTGC
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54 CTTGGCGATGCATCCGAAGGTGCTTATAATGGACGAGCCCACCGCAGGTCTCGATCCCCAGATGTCCAAGGAGCTCATCGAGCTCGCGGACGAGCTGCAC
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55 CATCTTGGAACGACCGTTATTTTTTCAACCCATGACGTGGACCTCTCATATTCTTGGGCGGACGAGGTCCATGTCCTAAGAGGGGGCCGTAATGTATATT
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56 CGGGGAGCTCAGAAAGATTCTATGACGATACTTCGGAAGTTTATCTTTCGGGCCTTGTCGAACCGGCCATGTACGACATCAACGTCAGCATCTCCGAGCT
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57 TGCCGGATGCCCCGTTGAACCGTTTCCCAAAACCCTGCCTCAGCTTGTGGCCAAGGCAGTGCCGTCAGAGGGGCCGGGCACGGTTCACATCCTTCCCGTG
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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58 GAAGGTCCGGTCGACCGGGAGCTGTTCTCCTCTCTGACGTCCGGGTCCGGGATGTCCGCAACAGGCGTCTACGGTACTAATGCAAGAAAATCTGCGGAGG
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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59 CTTCCAAATTGCCGATAGATTATTTCTTCGGGGCCGACGAGGGATGCATAATAGAGGCTTTGCACGGCAAAGACACGCTGATATGCTGCGACAGGTCCCT
ad7507073c3f planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/cat commit f80f020c77d04c2e13b89aaea3d784314b940931-dirty
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60 TACAGATCTGCTGATATCGAAGATAGGCAGTATGTCCCGGTTCGGGACAGAGGTCCCTTATTCTCTGCACTGAACATTTCTTTTTTCCGGGGGTTCGAAC