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diff tool_data_table_conf.xml.sample @ 8:fbbbc9fd8fb9

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Use fasta_indexes tool_data_table
author Jim Johnson <jj@umn.edu>
date Mon, 13 Oct 2014 09:29:20 -0500
parents 2bb88bf1c1dd
children 532a336a14c1
line wrap: on
line diff
--- a/tool_data_table_conf.xml.sample	Mon Oct 13 09:12:47 2014 -0500
+++ b/tool_data_table_conf.xml.sample	Mon Oct 13 09:29:20 2014 -0500
@@ -1,12 +1,6 @@
 <tables>
-    <!-- Locations of all fasta files under genome directory -->
-    <table name="all_fasta" comment_char="#">
+    <table name="fasta_indexes" comment_char="#">
         <columns>value, dbkey, name, path</columns>
-        <file path="tool-data/all_fasta.loc" />
-    </table>
-    <!-- Location of SAMTools indexes and other files -->
-    <table name="sam_fa_indexes" comment_char="#">
-        <columns>line_type, value, path</columns>
-        <file path="tool-data/sam_fa_indices.loc" />
+        <file path="tool-data/fasta_indexes.loc" />
     </table>
 </tables>