Mercurial > repos > jjohnson > encyclopedia_walnut
diff encyclopedia_walnut.xml @ 7:7556b19daa48 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/encyclopedia/tools/encyclopedia commit dd611a143e4e003a5fb085cdf93ae477cc5ea0b1"
author | jjohnson |
---|---|
date | Wed, 26 Aug 2020 14:42:51 -0400 |
parents | 0172dfa08216 |
children |
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--- a/encyclopedia_walnut.xml Fri Aug 21 16:13:00 2020 -0400 +++ b/encyclopedia_walnut.xml Wed Aug 26 14:42:51 2020 -0400 @@ -9,7 +9,7 @@ @LINK_SCAN_INPUT@ @LINK_FASTA_INPUT@ @LINK_TARGET_FASTA@ - EncyclopeDIA -Djava.awt.headless=true -Xmx12g -walnut + EncyclopeDIA -Djava.awt.headless=true -Xmx\$[ \${GALAXY_MEMORY_MB:-20480} / 1024 ]g -walnut @SCAN_INPUT@ @FASTA_INPUT@ @TARGET_FASTA@ @@ -65,7 +65,7 @@ <test> <param name="scan_input" ftype="mzml" value="BCS_hela_narrow_3_1.mzML"/> <param name="fasta" ftype="fasta" value="uniprot_tiny_human.fasta"/> - <param name="select_outputs" values="log,features,pecan"/> + <param name="select_outputs" value="log,features,pecan"/> <output name="features" ftype="tabular"> <assert_contents> <has_text text="LHYNEGLNIK"/>