Mercurial > repos > jjohnson > fgbio_fastq_to_bam

diff fgbio_fastq_to_bam.xml @ 1:4635a93ebd91 draft

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"planemo upload commit 692ea558cbbefee93859dc2b005fab5ac4970eb8"
author jjohnson
date Wed, 24 Feb 2021 13:01:53 +0000
parents ee774248788f
children 6137ff37bea1
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--- a/fgbio_fastq_to_bam.xml	Sun Feb 21 23:40:09 2021 +0000
+++ b/fgbio_fastq_to_bam.xml	Wed Feb 24 13:01:53 2021 +0000
@@ -76,7 +76,9 @@
         </section>
     </inputs>
     <outputs>
-        <data name="output" format="unsorted.bam" />
+        <data name="output" format="bam" >
+            <expand macro="sort_order_change_format" />
+        </data>
     </outputs>
     <help><![CDATA[
 **fgbio FastqToBam**