Mercurial > repos > jjohnson > mothur_toolsuite
annotate mothur/tool-data/mothur_taxonomy.loc.sample @ 15:a6189f58fedb
Mothur - updated for Mothur version 1.22.0
author | Jim Johnson <jj@umn.edu> |
---|---|
date | Tue, 08 Nov 2011 11:45:32 -0600 |
parents | |
children | 09740be2bc9c |
rev | line source |
---|---|
15
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
1 #This is a sample file distributed with Galaxy that enables tools |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
2 #to use a directory of metagenomics files. |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
3 #file has this format (white space characters are TAB characters): |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
4 # |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
5 # Silva reference files: http://www.mothur.org/wiki/Silva_reference_files |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
6 # |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
7 #<taxonomyname> <file_base> |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
8 # |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
9 archaea.gg /project/db/galaxy/mothur/Silva.archaea/silva.archaea.gg.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
10 archaea.silva /project/db/galaxy/mothur/Silva.archaea/silva.archaea.silva.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
11 archaea.rdp /project/db/galaxy/mothur/Silva.archaea/silva.archaea.rdp.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
12 archaea.ncbi /project/db/galaxy/mothur/Silva.archaea/silva.archaea.ncbi.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
13 bacteria.gg /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.gg.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
14 bacteria.silva /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.silva.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
15 bacteria.ncbi /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.ncbi.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
16 bacteria.rdp /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
17 bacteria.rdp6 /project/db/galaxy/mothur/silva.bacteria/silva.bacteria.rdp6.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
18 eukarya.silva /project/db/galaxy/mothur/silva.eukarya.silva.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
19 eukarya.ncbi /project/db/galaxy/mothur/silva.eukarya.ncbi.tax |
a6189f58fedb
Mothur - updated for Mothur version 1.22.0
Jim Johnson <jj@umn.edu>
parents:
diff
changeset
|
20 |