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Initial tool configs for qiime, most need work.
author Jim Johnson <jj@umn.edu>
date Sun, 17 Jul 2011 10:30:11 -0500
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e5c3175506b7 Initial tool configs for qiime, most need work.
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1 <tool id="tree_compare" name="tree_compare" version="1.2.0">
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2 <description>Compare jackknifed/bootstrapped trees</description>
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3 <requirements>
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4 <requirement type="binary">tree_compare.py</requirement>
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5 </requirements>
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6 <command interpreter="python">
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7 qiime_wrapper.py
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8 --galaxy_tmpdir='$__new_file_path__'
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9 tree_compare.py
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10 --master_tree=$master_tree
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11 --support_dir=$support_dir
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12 --output_dir=$__new_file_path__
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13 </command>
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14 <inputs>
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15 <param name="master_tree" type="text" label="master_tree"
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16 help="master tree filepath [REQUIRED]"/>
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17 <param name="support_dir" type="text" label="support_dir"
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18 help="path to dir containing support trees [REQUIRED]"/>
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19 </inputs>
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20 <outputs>
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21
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22 </outputs>
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23 <tests>
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24 </tests>
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25 <help>
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26
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27 </help>
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28 </tool>
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