Mercurial > repos > jjohnson > qiime

view tree_compare.xml @ 0:e5c3175506b7 default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Initial tool configs for qiime, most need work.
author Jim Johnson <jj@umn.edu>
date Sun, 17 Jul 2011 10:30:11 -0500
parents
children
line wrap: on
line source

<tool id="tree_compare" name="tree_compare" version="1.2.0">
 <description>Compare jackknifed/bootstrapped trees</description>
 <requirements>
  <requirement type="binary">tree_compare.py</requirement>
 </requirements>
 <command interpreter="python">
  qiime_wrapper.py
  --galaxy_tmpdir='$__new_file_path__'
  tree_compare.py
  --master_tree=$master_tree
  --support_dir=$support_dir
  --output_dir=$__new_file_path__
 </command>
 <inputs>
  <param name="master_tree" type="text"  label="master_tree"
   help="master tree filepath [REQUIRED]"/>
  <param name="support_dir" type="text"  label="support_dir"
   help="path to dir containing support trees [REQUIRED]"/>
 </inputs>
 <outputs>
  
 </outputs>
 <tests>
 </tests>
 <help>
  
 </help>
</tool>