diff make_qiime_py_file.xml @ 0:e5c3175506b7 default tip

Initial tool configs for qiime, most need work.
author Jim Johnson <jj@umn.edu>
date Sun, 17 Jul 2011 10:30:11 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/make_qiime_py_file.xml	Sun Jul 17 10:30:11 2011 -0500
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+<tool id="make_qiime_py_file" name="make_qiime_py_file" version="1.2.0">
+ <description>Create python file</description>
+ <requirements>
+  <requirement type="binary">make_qiime_py_file.py</requirement>
+ </requirements>
+ <command interpreter="python">
+  qiime_wrapper.py
+  --galaxy_tmpdir='$__new_file_path__'
+  make_qiime_py_file.py
+  --output_fp=$output_fp
+  $script
+  $test
+  --author_name=$author_name
+  --author_email=$author_email
+  --copyright=$copyright
+ </command>
+ <inputs>
+  <param name="script" type="boolean" truevalue="--script" falsevalue="" checked="false" label="script"
+   help="Pass if creating a script to include option parsing framework [default:False]."/>
+  <param name="test" type="boolean" truevalue="--test" falsevalue="" checked="false" label="test"
+   help="Pass if creating a unit test file to include relevant information [default:False]."/>
+  <param name="author_name" type="text" value="AUTHOR_NAME" label="author_name"
+   help="The script author's (probably you) name to be included the header variables. This will typically need to be enclosed  in quotes to handle spaces. [default:AUTHOR_NAME]"/>
+  <param name="author_email" type="text" value="AUTHOR_EMAIL" label="author_email"
+   help="The script author's (probably you) e-mail address to be included the header variables. [default:AUTHOR_EMAIL]"/>
+  <param name="copyright" type="text" value="Copyright 2010, The QIIME project" label="copyright"
+   help="The copyright information to be included in the header variables. [default:Copyright 2010, The QIIME project]"/>
+ </inputs>
+ <outputs>
+  <data format="txt" name="output_fp"/>
+ </outputs>
+ <tests>
+ </tests>
+ <help>
+  
+ </help>
+</tool>
+