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Initial tool configs for qiime, most need work.
author Jim Johnson <jj@umn.edu>
date Sun, 17 Jul 2011 10:30:11 -0500
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<tool id="convert_unifrac_sample_mapping_to_otu_table" name="convert_unifrac_sample_mapping_to_otu_table" version="1.2.0">
 <description>Convert a UniFrac sample mapping file to an OTU table</description>
 <requirements>
  <requirement type="binary">convert_unifrac_sample_mapping_to_otu_table.py</requirement>
 </requirements>
 <command interpreter="python">
  qiime_wrapper.py
  --galaxy_tmpdir='$__new_file_path__'
  convert_unifrac_sample_mapping_to_otu_table.py
  --sample_mapping_fp=$sample_mapping_fp
  --output_fp=$output_fp
 </command>
 <inputs>
  <param name="sample_mapping_fp" type="data" format="tabular" label="sample_mapping_fp"
   help="path to the sample mapping file [REQUIRED]"/>
 </inputs>
 <outputs>
  <data format="txt" name="output_fp"/>
 </outputs>
 <tests>
 </tests>
 <help>
  
 </help>
</tool>