Mercurial > repos > jjohnson > qiime
view convert_otu_table_to_unifrac_sample_mapping.xml @ 0:e5c3175506b7 default tip
Initial tool configs for qiime, most need work.
author | Jim Johnson <jj@umn.edu> |
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date | Sun, 17 Jul 2011 10:30:11 -0500 |
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<tool id="convert_otu_table_to_unifrac_sample_mapping" name="convert_otu_table_to_unifrac_sample_mapping" version="1.2.0"> <description>Convert a QIIME OTU table to a UniFrac sample mapping file</description> <requirements> <requirement type="binary">convert_otu_table_to_unifrac_sample_mapping.py</requirement> </requirements> <command interpreter="python"> qiime_wrapper.py --galaxy_tmpdir='$__new_file_path__' convert_otu_table_to_unifrac_sample_mapping.py --otu_table_fp=$otu_table_fp --output_fp=$output_fp </command> <inputs> <param name="otu_table_fp" type="data" format="txt" label="otu_table_fp" help="path to the otu table [REQUIRED]"/> </inputs> <outputs> <data format="txt" name="output_fp"/> </outputs> <tests> </tests> <help> </help> </tool>