Mercurial > repos > jjohnson > translate_bed_sequences

annotate test-data/translated_bed_sequences.fa @ 0:d328db400280 draft default tip

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author jjohnson
date Wed, 05 Feb 2014 09:27:54 -0500
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1 >JUNC00019210_2 pep:novel chromosome:GRCh37:15:40902460:40907575:1 depth:1
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2 SYENSEKVRNGRNKKLEDNYCEIT
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3 >JUNC00019210_3 pep:novel chromosome:GRCh37:15:40902461:40907549:1 depth:1
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4 HMKIVRKSEMEGIRN
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5 >JUNC00000003_1 pep:novel chromosome:GRCh37:9:17406:18053:-1 depth:1
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6 APWTSGPCRYKKYVFLDPLAGAVTKTHVMLGAE
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7 >JUNC00000003_2 pep:novel chromosome:GRCh37:9:17438:18052:-1 depth:1
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8 PPGRAGPAGTRSMSSWTPWLVL
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9 >JUNC00000003_3 pep:novel chromosome:GRCh37:9:17404:18051:-1 depth:1
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10 PLDERALQVQEVCLPGPPGWCCNKDPCDAGGRD
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11 >JUNC00000874_2 pep:novel chromosome:GRCh37:8:27369376:27370079:1 depth:1
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12 PTSCNPSDMSHGYVTVKGYHKAKATHRGPWLVA
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13 >JUNC00001897_1 pep:novel chromosome:GRCh37:7:99077597:99079392:1 depth:1
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14 HLLSLFFQLGVHICIPNFRNNSVSHCTQLRVLL
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15 >JUNC00001897_2 pep:novel chromosome:GRCh37:7:99077598:99079360:1 depth:1
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16 IYCLYFSNLVCISVYPTSEITV
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17 >JUNC00002152_1 pep:novel chromosome:GRCh37:7:148909514:148910831:1 depth:1
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18 DQQDLADRDIPTDPNSGENKSLSSQHMTFCHGS
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19 >JUNC00002152_2 pep:novel chromosome:GRCh37:7:148909515:148910811:1 depth:1
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20 ISRIWQTEIFPRIPIQVRTRVSHLST
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21 >JUNC00002625_1 pep:novel chromosome:GRCh37:6:41766614:41767580:-1 depth:1
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22 LKDSGGLAVIIERRLGSMSSLT
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23 >JUNC00002625_3 pep:novel chromosome:GRCh37:6:41766612:41767578:-1 depth:1
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24 KRFRWSGRNHREKIGVHVVFDQ
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25 >JUNC00002772_1 pep:novel chromosome:GRCh37:6:84856497:84862316:-1 depth:1
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26 LKMKSEAVMNQFENSMRRYL