Mercurial > repos > john-mccallum > dnaclust

annotate fastaselect.sh @ 2:13656c2d7c73 draft

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Uploaded fastaselect as sh
author john-mccallum
date Wed, 26 Jun 2013 22:41:02 -0400
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13656c2d7c73 Uploaded fastaselect as sh
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1 #!/bin/env sh
13656c2d7c73 Uploaded fastaselect as sh
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2 ##runs fastaselect using input cluster list and multifasta
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3 fastafile=$1
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4 clusterfile=$2
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5 outputfile=$3
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6
13656c2d7c73 Uploaded fastaselect as sh
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7 cat $clusterfile | fastaselect -c -f $fastafile > $outputfile