Mercurial > repos > john-mccallum > dnaclust

view fastaselect.sh @ 3:17a8f8670dc9 draft

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Uploaded new fastaselect wrapper
author john-mccallum
date Wed, 26 Jun 2013 22:41:45 -0400
parents 13656c2d7c73
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#!/bin/env sh
##runs fastaselect using  input cluster list and multifasta
fastafile=$1
clusterfile=$2
outputfile=$3

cat $clusterfile | fastaselect  -c  -f  $fastafile > $outputfile