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comparison PhageDPO.xml @ 43:ff949d77ed98 draft

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Uploaded
author jose_duarte
date Thu, 21 Nov 2024 14:45:46 +0000
parents e3d2637686a0
children d7d06076817a
comparison
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42:e3d2637686a0 43:ff949d77ed98
1 <help><![CDATA[ 1 <tool id="PhageDPO" name="PhageDPO" version="0.1.0" python_template_version="3.5">
2 2 <description>
3 Phage Depolymerase Finder
4 </description>
5 <requirements>
6 <requirement type="package" version="1.78">biopython</requirement>
7 <requirement type="package" version="0.24.1">scikit-learn</requirement>
8 <requirement type="package" version="1.19.2">numpy</requirement>
9 <requirement type="package" version="1.2.3">pandas</requirement>
10 </requirements>
11 <command detect_errors="exit_code"><![CDATA[
12 python '$__tool_directory__/DPOGALAXY.py' '${input1}'
13 ]]></command>
14 <inputs>
15 <param type="data" name="input1" format="fasta" label="Fasta file"/>
16 </inputs>
17 <outputs>
18 <data name="output1" format="html" from_work_dir="output.html"
19 label="DPO Prediction"/>
20 </outputs>
21 <tests>
22 <test>
23 <param name="input1" value="fasta_file.fasta"/>
24 <output name="output1" file="output.html"/>
25 </test>
26 </tests>
27 <help><![CDATA[
28
3 ======== 29 ========
4 PhageDPO 30 PhageDPO
5 ======== 31 ========
6 32
7 Predicts the existence of Phage Polysaccharide Depolymerase. 33 Predicts the existence of Phage Polysaccharide Depolymerase.