Mercurial > repos > jshay > hitsandclusters

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author jshay
date Tue, 20 Aug 2019 11:23:10 -0400
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1 name: hitsandclusters
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2 owner: jashay90
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3 description: Count hits per gene and cluster
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4 long_description: Takes a bam alignment file and a tab-delimited file defining the cluster identity of each reference sequence as input. Produces two output files -- a file with counts and proportion covered for each reference sequence, and a file with the maximum count and proportion covered within each cluster.
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5 remote_repository_url: https://github.com/jashay90/galaxytools/tree/master/countandcluster
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6 type: unrestricted
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7 categories:
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8 - Metagenomics
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9 - Sequence Analysis