Mercurial > repos > koen > gbsx

view test-data/gbsDemultiplex.stats @ 23:3b325560887b draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
new version of gbsx: v1.2 with barcodeGenerator, demultiplex and digest
author koen
date Tue, 26 Jan 2016 07:56:34 -0500
parents 9819913262ec
children
line wrap: on
line source

sampleID	barcode	enzyme	total.count	total.perc	mismatch.0.count	mismatch.0.perc	mismatch.1.count	mismatch.1.perc	mismatch.2.count	mismatch.2.perc	basecall.count	basecall.above.30.perc	basecall.qual.avg
sample1	ACCACTATGT	ApeKI	990	0.198	865	0.8737373737373737	125	0.12626262626262627	0	0.0	169293	0.979792430874283	34.582327680412064
sample2	CTCATACCACG	ApeKI	986	0.1972	833	0.8448275862068966	153	0.15517241379310345	0	0.0	168194	0.9801776519970986	34.584016076673365
sample3	GAAGGTCCT	ApeKI	989	0.1978	859	0.8685540950455005	130	0.13144590495449948	0	0.0	169558	0.9802899302893405	34.587108835914556
sample4	GCGGCGTA	ApeKI	988	0.1976	856	0.8663967611336032	132	0.13360323886639677	0	0.0	169533	0.9805229660302124	34.60191821061386
sample5	TCAGACGGTAAT	ApeKI	979	0.1958	832	0.849846782431052	147	0.1501532175689479	0	0.0	167025	0.9797694955844933	34.58716958539141
undetermined			68	0.0136