<tool id="EMBOSS: kgenemarkhmm" name="kgenemarkhmm" version="1.0.2">
  <description>Finds genes in prokaryotic genomes using GeneMarkhmm</description>
  <command>kgenemarkhmm -seqall $input1 -title $title -list $list -rbs $rbs -auto -outfile $out_file1</command>
  <inputs>
  <param format="data" name="input1" type="data">
    <label>Sequence</label>
  </param>
    <param name="title" size="4" type="text" value="">
      <label>Your job title</label>
    </param>
    <param name="list" type="select" value="no">
      <label>Show list about species of prediction models</label>
      <option value="no">No</option>
      <option value="yes">Yes</option>
    </param>
    <param name="rbs" type="select" value="yes">
      <label>Use RBS model if available</label>
      <option value="no">No</option>
      <option value="yes">Yes</option>
    </param>

  </inputs>
  <outputs>
    <data format="txt" name="out_file1" label="${tool.name} for ${input1.name}" />    
  </outputs>
</tool>