Mercurial > repos > lain > xseeker

comparison resources/galaxy/GIT/config/galaxy.yml @ 0:15c9fbefeaf1 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
" master branch Updating"
author lain
date Tue, 01 Feb 2022 14:19:30 +0000
parents
children
comparison
equal deleted inserted replaced
-1:000000000000 0:15c9fbefeaf1
1 diff --git a/lib/galaxy/config/sample/galaxy.yml.sample b/lib/galaxy/config/sample/galaxy.yml.sample
2 index b0fe163e6d..975acbf855 100644
3 --- a/lib/galaxy/config/sample/galaxy.yml.sample
4 +++ b/lib/galaxy/config/sample/galaxy.yml.sample
5 @@ -105,6 +105,30 @@ uwsgi:
6 # to be in the same group as the Galaxy system user
7 umask: 027
8
9 + http: localhost:8080
10 +
11 + threads: 8
12 +
13 + http-raw-body: True
14 +
15 + offload-threads: 8
16 +
17 + master: true
18 +
19 + module: galaxy.webapps.galaxy.buildapp:uwsgi_app()
20 +
21 + interactivetools_enable: true
22 + interactivetools_map: database/interactivetools_map.sqlite
23 + python-raw: scripts/interactivetools/key_type_token_mapping.py
24 + route-host: ^([A-Za-z0-9]+(?:-[A-Za-z0-9]+)*)-([A-Za-z0-9]+(?:-[A-Za-z0-9]+)*)\.([A-Za-z0-9]+(?:-[A-Za-z0-9]+)*)\.(interactivetool\.localhost:8080)$ goto:interactivetool
25 + route-run: goto:endendend
26 + route-label: interactivetool
27 + route-host: ^([A-Za-z0-9]+(?:-[A-Za-z0-9]+)*)-([A-Za-z0-9]+(?:-[A-Za-z0-9]+)*)\.([A-Za-z0-9]+(?:-[A-Za-z0-9]+)*)\.(interactivetool\.localhost:8080)$ rpcvar:TARGET_HOST rtt_key_type_token_mapper_cached $1 $3 $2 $4 $0 5
28 + route-if-not: empty:${TARGET_HOST} httpdumb:${TARGET_HOST}
29 + route: .* break:404 Not Found
30 + route-label: endendend
31 +
32 +
33 galaxy:
34
35 # The directory that will be prepended to relative paths in options
36 @@ -2091,3 +2115,18 @@ galaxy:
37 # Path to dynamic tool destinations configuration file.
38 #tool_destinations_config_file: tool_destinations.yml
39
40 +
41 + interactivetools_enable: true
42 + # outputs_to_working_directory will provide you with a better level of isolation. It is highly recommended to set
43 + # this parameter with InteractiveTools.
44 + outputs_to_working_directory: true
45 + interactivetools_prefix: interactivetool
46 + interactivetools_map: database/interactivetools_map.sqlite
47 + # If you develop InteractiveTools locally and do not have a full FQDN you can
48 + # use an arbritrary one, e.g. 'my-hostname' here, if you set this hostname in your
49 + # job_conf.xml as well (see the corresponding comment). If running mac OS X, do not match the
50 + # "http://host.docker.internal:8080" used at galaxy_infrastructure_url in the galaxy.yml file,
51 + # and use an arbitrary name here instead.
52 + # Please make sure that in the local development case you use https://localhost:8080 to access
53 + # your Galaxy. http://my-hostname:8080 will not work.
54 + # galaxy_infrastructure_url: http://my-hostname:8080