Mercurial > repos > ldelisle > revertr2orientationinbam

annotate test-data/input.sam @ 1:2c86ad672f52 draft default tip

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planemo upload commit 89aa8abdc88aa922cab8d9c5f17078ba1e388339-dirty
author ldelisle
date Wed, 19 Oct 2022 08:34:43 +0000
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2c86ad672f52 planemo upload commit 89aa8abdc88aa922cab8d9c5f17078ba1e388339-dirty
ldelisle
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1 @HD VN:1.4 SO:coordinate
2c86ad672f52 planemo upload commit 89aa8abdc88aa922cab8d9c5f17078ba1e388339-dirty
ldelisle
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2 @SQ SN:chr1 LN:195471971
2c86ad672f52 planemo upload commit 89aa8abdc88aa922cab8d9c5f17078ba1e388339-dirty
ldelisle
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3 1 163 chr1 3151308 255 43M = 3151560 295 GTCCCAAAAAGCAGAGAGAAATATCTCTCTGGGCCTTATAGCA AAAAAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE NH:i:1 HI:i:1 AS:i:82 nM:i:1
2c86ad672f52 planemo upload commit 89aa8abdc88aa922cab8d9c5f17078ba1e388339-dirty
ldelisle
parents:
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4 1 83 chr1 3151560 255 43M = 3151308 -295 CTGCTGGAAAAACTGTTCGTTTTAGGAAATAAGGGCGAGTGCG EEEEEEAEEEEEEEEEAEEEEEEEEEEEEEEEEEEEEEAAAAA NH:i:1 HI:i:1 AS:i:82 nM:i:1
2c86ad672f52 planemo upload commit 89aa8abdc88aa922cab8d9c5f17078ba1e388339-dirty
ldelisle
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5 2 137 chr1 3155261 255 9S20M * 0 0 TGTGGGTTTTACACACGGGAGGAATCGGG AAAAA/EEE/EE6EAEE6EAE6/EEEAEE NH:i:1 HI:i:1 AS:i:19 nM:i:0
2c86ad672f52 planemo upload commit 89aa8abdc88aa922cab8d9c5f17078ba1e388339-dirty
ldelisle
parents:
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6 3 99 chr1 3195817 255 43M = 3195911 137 ATCTTACTCTGTTTCACAGATAGGTGCTGAGGTTAAATTTTGC AAAAAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE NH:i:1 HI:i:1 AS:i:84 nM:i:0
2c86ad672f52 planemo upload commit 89aa8abdc88aa922cab8d9c5f17078ba1e388339-dirty
ldelisle
parents:
diff changeset
7 3 147 chr1 3195911 255 43M = 3195817 -137 GGTGTAGGTTCTTAGACGCAAGAAATCTCAGGTAGAGTTTGGC EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAAAA NH:i:1 HI:i:1 AS:i:84 nM:i:0