Mercurial > repos > lecorguille > xcms_fillpeaks

annotate README.rst @ 12:dcb9041cb9ea draft

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planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 4897a06ef248e2e74e57a496dd68adbda3c828f1
author lecorguille
date Wed, 29 Nov 2017 09:47:20 -0500
parents de0d85537ee3
children 91c71f3808f3
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2 Changelog/News
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3 --------------
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dcb9041cb9ea planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 4897a06ef248e2e74e57a496dd68adbda3c828f1
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5 **Version 2.1.1 - 29/11/2017**
dcb9041cb9ea planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 4897a06ef248e2e74e57a496dd68adbda3c828f1
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dcb9041cb9ea planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 4897a06ef248e2e74e57a496dd68adbda3c828f1
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7 - BUGFIX: To avoid issues with accented letter in the parentFile tag of the mzXML files, we changed a hidden mechanim to LC_ALL=C
dcb9041cb9ea planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 4897a06ef248e2e74e57a496dd68adbda3c828f1
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de0d85537ee3 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
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9 **Version 2.1.0 - 07/02/2017**
de0d85537ee3 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
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de0d85537ee3 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
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11 - IMPROVEMENT: change the management of the peaklist ids. The main ids remain the same as xcms generated. The export setiings now only add custom names in the variableMetadata tab (namecustom)
de0d85537ee3 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
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de0d85537ee3 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
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13 - IMPROVEMENT: xcms.fillpeaks can deal with merged individual data
de0d85537ee3 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit a6f5f18b3d6130f7d7fbb9f2df856838c6217797
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ee29f0a6e361 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 08e7f269a5c59687a7768be8db5fcb4e4d736093
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15 **Version 2.0.8 - 22/12/2016**
ee29f0a6e361 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 08e7f269a5c59687a7768be8db5fcb4e4d736093
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ee29f0a6e361 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 08e7f269a5c59687a7768be8db5fcb4e4d736093
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17 - IMPROVEMENT: Add an option to export the peak list at this step without have to wait camara.annotate
ee29f0a6e361 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit 08e7f269a5c59687a7768be8db5fcb4e4d736093
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cce30b3398e0 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit ec6f0c17bb277ea34f898d96d12d3357220f73d4
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19 **Version 2.0.7 - 06/07/2016**
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cce30b3398e0 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit ec6f0c17bb277ea34f898d96d12d3357220f73d4
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21 - UPGRADE: upgrate the xcms version from 1.44.0 to 1.46.0
cce30b3398e0 planemo upload for repository https://github.com/workflow4metabolomics/xcms commit ec6f0c17bb277ea34f898d96d12d3357220f73d4
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23 **Version 2.0.6 - 04/04/2016**
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25 - TEST: refactoring to pass planemo test using conda dependencies
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28 **Version 2.0.5 - 10/02/2016**
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30 - BUGFIX: better management of errors. Datasets remained green although the process failed
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32 - UPDATE: refactoring of internal management of inputs/outputs
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34 - UPDATE: refactoring to feed the new report tool
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37 **Version 2.0.2 - 02/06/2015**
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39 - IMPROVEMENT: new datatype/dataset formats (rdata.xcms.raw, rdata.xcms.group, rdata.xcms.retcor ...) will facilitate the sequence of tools and so avoid incompatibility errors.
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41 - IMPROVEMENT: parameter labels have changed to facilitate their reading.