annotate test-data/htseq-test-paired_counts.tsv @ 20:3b3601a2a7c7 draft

planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
author lparsons
date Mon, 22 Jun 2015 17:01:05 -0400
parents 5d969cb56112
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
1 HRA1 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
2 YAL001C 12
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
3 YAL002W 6
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
4 YAL003W 5
20
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
5 YAL004W 2
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
6 YAL005C 2
10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
7 YAL007C 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
8 YAL008W 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
9 YAL009W 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
10 YAL010C 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
11 YAL011W 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
12 YAL012W 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
13 YAL013W 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
14 YAL014C 5
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
15 YAL015C 5
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
16 YAL016C-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
17 YAL016C-B 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
18 YAL016W 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
19 YAL017W 8
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
20 YAL018C 5
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
21 YAL019W 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
22 YAL019W-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
23 YAL020C 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
24 YAL021C 10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
25 YAL022C 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
26 YAL023C 5
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
27 YAL024C 13
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
28 YAL025C 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
29 YAL026C 6
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
30 YAL026C-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
31 YAL027W 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
32 YAL028W 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
33 YAL029C 10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
34 YAL030W 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
35 YAL031C 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
36 YAL031W-A 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
37 YAL032C 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
38 YAL033W 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
39 YAL034C 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
40 YAL034C-B 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
41 YAL034W-A 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
42 YAL035W 7
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
43 YAL036C 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
44 YAL037C-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
45 YAL037C-B 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
46 YAL037W 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
47 YAL038W 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
48 YAL039C 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
49 YAL040C 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
50 YAL041W 8
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
51 YAL042C-A 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
52 YAL042W 5
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
53 YAL043C 9
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
54 YAL044C 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
55 YAL044W-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
56 YAL045C 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
57 YAL046C 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
58 YAL047C 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
59 YAL047W-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
60 YAL048C 7
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
61 YAL049C 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
62 YAL051W 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
63 YAL053W 5
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
64 YAL054C 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
65 YAL055W 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
66 YAL056C-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
67 YAL056W 7
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
68 YAL058W 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
69 YAL059C-A 6
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
70 YAL059W 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
71 YAL060W 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
72 YAL061W 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
73 YAL062W 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
74 YAL063C 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
75 YAL063C-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
76 YAL064C-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
77 YAL064W 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
78 YAL064W-B 0
20
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
79 YAL065C 1
10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
80 YAL066W 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
81 YAL067C 8
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
82 YAL067W-A 1
20
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
83 YAL068C 0
10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
84 YAL068W-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
85 YAL069W 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
86 YAR002C-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
87 YAR002W 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
88 YAR003W 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
89 YAR007C 7
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
90 YAR008W 0
20
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
91 YAR009C 0
10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
92 YAR010C 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
93 YAR014C 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
94 YAR015W 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
95 YAR018C 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
96 YAR019C 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
97 YAR019W-A 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
98 YAR020C 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
99 YAR023C 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
100 YAR027W 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
101 YAR028W 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
102 YAR029W 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
103 YAR030C 2
20
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
104 YAR031W 3
10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
105 YAR033W 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
106 YAR035C-A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
107 YAR035W 3
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
108 YAR042W 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
109 YAR047C 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
110 YAR050W 4
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
111 YAR053W 0
20
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
112 YAR060C 0
10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
113 YAR061W 0
20
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
114 YAR062W 1
10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
115 YAR064W 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
116 YAR066W 2
20
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
117 YAR068W 1
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
118 YAR069C 0
10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
119 YAR070C 0
20
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
lparsons
parents: 10
diff changeset
120 YAR071W 2
10
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
121 YAR073W 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
122 YAR075W 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
123 snR18 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
124 tA(UGC)A 0
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
125 tL(CAA)A 1
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
126 tP(UGG)A 2
5d969cb56112 Version 0.3 - paried-end sorting is now built-in (uses Picard tools)
lparsons
parents:
diff changeset
127 tS(AGA)A 3