Mercurial > repos > lparsons > htseq_count

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/htseq_count commit 03f64004f90ac0a7be67ecfc355a7b361f3c3314
author iuc
date Tue, 20 Sep 2016 17:51:06 -0400
parents 3b3601a2a7c7
children f1368427a79c
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1 htseq-count wrapper for Galaxy
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2 ==============================
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4 Galaxy wrapper for
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
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5 `htseq-count <http://www-huber.embl.de/users/anders/HTSeq/doc/count.html>`_
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6 script from python
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7 `HTSeq <http://www-huber.embl.de/users/anders/HTSeq/doc/index.html>`_ package.
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8
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9 Installation
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10 ------------
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12 Installation directly from the `Galaxy Toolshed <http://toolshed.g2.bx.psu.edu/view/lparsons/htseq_count>`_ is
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13 recommended.
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55ed198f2c1c planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/htseq_count commit 03f64004f90ac0a7be67ecfc355a7b361f3c3314
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15 Galaxy Wrapper License
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16 ----------------------
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18 Copyright (c) 2012-2014, Lance R. Parsons <lparsons@princeton.edu>
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19 All rights reserved.
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21 Licensed under the BSD 2-Clause License: <http://opensource.org/licenses/BSD-2-Clause>
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23 Redistribution and use in source and binary forms, with or without
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24 modification, are permitted provided that the following conditions are met:
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26 * Redistributions of source code must retain the above copyright notice,
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
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27 this list of conditions and the following disclaimer.
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29 * Redistributions in binary form must reproduce the above copyright notice,
3b3601a2a7c7 planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/htseq_count commit 8a40cf16ce0b48cdfda88a505869e77e8826cb23
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30 this list of conditions and the following disclaimer in the documentation
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31 and/or other materials provided with the distribution.
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33 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
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34 ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
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35 WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
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36 DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
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37 FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
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38 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
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39 SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
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40 CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
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41 OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
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42 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.