Mercurial > repos > lparsons > htseq_count

diff tool_dependencies.xml @ 1:14e18dc9ed13

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Build htseq package from source
author Lance Parsons <lparsons@princeton.edu>
date Tue, 04 Sep 2012 14:00:14 -0400
parents 3fdeebd7e710
children 265ca0f35789
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--- a/tool_dependencies.xml	Tue Sep 04 13:45:36 2012 -0400
+++ b/tool_dependencies.xml	Tue Sep 04 14:00:14 2012 -0400
@@ -8,6 +8,7 @@
                 <action type="set_environment">
                     <environment_variable name="PYTHONPATH" action="append_to">$INSTALL_DIR/lib/python</environment_variable>
                 </action>
+                <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py build</action>
                 <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin</action>
                 <action type="set_environment">
                     <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>