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planemo upload for repository https://github.com/lparsons/galaxy_tools/tree/master/tools/sam_stats commit 1a3c419bc0ded7c40cb2bc3e7c87bfb01ddfeba2
author lparsons
date Thu, 16 Jul 2015 17:35:52 -0400
parents b9e7569a4438
children
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reads	100
version	1.38.763
mapped reads	11
pct align	11.000000
mapped bases	377
phred	33
forward	0
reverse	11
len max	48
len mean	34.2727
len stdev	9.4137
mapq mean	255.0000
mapq stdev	0.0000
mapq Q1	255.00
mapq median	255.00
mapq Q3	255.00
snp rate	0.000000
pct mismatch	0.0000
base qual mean	31.5650
base qual stdev	3.2627
%A	27.5862
%C	34.4828
%G	16.7109
%T	21.2202
%PCRPRIMER1	8.753316
%PCRPRIMER1+1	45.358090
%PCRPRIMER1+2	9.814324
%PCRPRIMER2+1	36.074271
num ref seqs	4
num ref aligned	4