Mercurial > repos > lz_hust > gatktools
changeset 7:5312036ae97e draft
Deleted selected files
author | lz_hust |
---|---|
date | Sat, 01 Jun 2019 07:05:47 -0400 |
parents | a4e5c90cf6cb |
children | 3a8ef2ad0414 |
files | gatk-4.1.2.0.zip gatk-tools |
diffstat | 2 files changed, 0 insertions(+), 1188 deletions(-) [+] |
line wrap: on
line diff
--- a/gatk-tools Sat Jun 01 07:03:27 2019 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,1188 +0,0 @@ - - - - - - -<!DOCTYPE html> -<html lang="en"> - <head> - <meta charset="utf-8"> - <link rel="dns-prefetch" href="https://github.githubassets.com"> - <link rel="dns-prefetch" href="https://avatars0.githubusercontent.com"> - <link rel="dns-prefetch" href="https://avatars1.githubusercontent.com"> - <link rel="dns-prefetch" href="https://avatars2.githubusercontent.com"> - <link rel="dns-prefetch" href="https://avatars3.githubusercontent.com"> - <link rel="dns-prefetch" href="https://github-cloud.s3.amazonaws.com"> - <link rel="dns-prefetch" href="https://user-images.githubusercontent.com/"> - - - - <link crossorigin="anonymous" media="all" integrity="sha512-3+HOqCwtQal5hOJQ+mdxiq5zmGOTjF6RhjDsPLxbKDYgGlLFeCwzoIanb7j5IiCuXKUqyC2q8FdkC4nmx2P2rA==" rel="stylesheet" href="https://github.githubassets.com/assets/frameworks-a2fba223d5af91496cac70d4ec3624df.css" /> - <link crossorigin="anonymous" media="all" integrity="sha512-MRlTIqIyb8caK5+o8llXVntXovciHyAM4qE3kWU2S7SIjAPDxYp4mE0jQp4kP5UYegy+lG9y1I6VlsdzEjb5Qw==" rel="stylesheet" href="https://github.githubassets.com/assets/site-294181adec18ed639e160b96b45d17ac.css" /> - <link crossorigin="anonymous" media="all" integrity="sha512-e2cd11Gwm/SnNMk4avW8Pegf5TL3BOHKEDRrRx/u2dt3vZ/V1jI3ckZPooFM9/nY6QPCmoa7QpyUEho4JqtJIg==" rel="stylesheet" href="https://github.githubassets.com/assets/github-7d88b16c450c546e1d642f3e2215a89c.css" /> - - - - - - <meta name="viewport" content="width=device-width"> - - <title>GitHub - huster16/gatk-tools</title> - <meta name="description" content="Contribute to huster16/gatk-tools development by creating an account on GitHub."> - <link rel="search" type="application/opensearchdescription+xml" href="/opensearch.xml" title="GitHub"> - <link rel="fluid-icon" href="https://github.com/fluidicon.png" title="GitHub"> - <meta property="fb:app_id" content="1401488693436528"> - - <meta name="twitter:image:src" content="https://avatars3.githubusercontent.com/u/50308301?s=400&v=4" /><meta name="twitter:site" content="@github" /><meta name="twitter:card" content="summary" /><meta name="twitter:title" content="huster16/gatk-tools" /><meta name="twitter:description" content="Contribute to huster16/gatk-tools development by creating an account on GitHub." /> - <meta property="og:image" content="https://avatars3.githubusercontent.com/u/50308301?s=400&v=4" /><meta property="og:site_name" content="GitHub" /><meta property="og:type" content="object" /><meta property="og:title" content="huster16/gatk-tools" /><meta property="og:url" content="https://github.com/huster16/gatk-tools" /><meta property="og:description" content="Contribute to huster16/gatk-tools development by creating an account on GitHub." /> - - <link rel="assets" href="https://github.githubassets.com/"> - - <meta name="pjax-timeout" content="1000"> - - <meta name="request-id" content="9296:3F63:B1FBFC:1321364:5CF25B7F" data-pjax-transient> - - - - - <meta name="selected-link" value="repo_source" data-pjax-transient> - - <meta name="google-site-verification" content="KT5gs8h0wvaagLKAVWq8bbeNwnZZK1r1XQysX3xurLU"> - <meta name="google-site-verification" content="ZzhVyEFwb7w3e0-uOTltm8Jsck2F5StVihD0exw2fsA"> - <meta name="google-site-verification" content="GXs5KoUUkNCoaAZn7wPN-t01Pywp9M3sEjnt_3_ZWPc"> - - <meta name="octolytics-host" content="collector.githubapp.com" /><meta name="octolytics-app-id" content="github" /><meta name="octolytics-event-url" content="https://collector.githubapp.com/github-external/browser_event" /><meta name="octolytics-dimension-request_id" content="9296:3F63:B1FBFC:1321364:5CF25B7F" /><meta name="octolytics-dimension-region_edge" content="iad" /><meta name="octolytics-dimension-region_render" content="iad" /> -<meta name="analytics-location" content="/<user-name>/<repo-name>" data-pjax-transient="true" /> - - - - <meta name="google-analytics" content="UA-3769691-2"> - - -<meta class="js-ga-set" name="dimension1" content="Logged Out"> - - - - - - <meta name="hostname" content="github.com"> - <meta name="user-login" content=""> - - <meta name="expected-hostname" content="github.com"> - <meta name="js-proxy-site-detection-payload" content="MGQzNzE0OTI3ZTEzMTA1M2M2MDcwOGU2OGEyY2E0MjYzMzhhNzAzMmU2ZmYyZWIwMjk2YmU4Y2QyZmQ0OTYyYnx7InJlbW90ZV9hZGRyZXNzIjoiMTI4LjExOC4yNTAuNSIsInJlcXVlc3RfaWQiOiI5Mjk2OjNGNjM6QjFGQkZDOjEzMjEzNjQ6NUNGMjVCN0YiLCJ0aW1lc3RhbXAiOjE1NTkzODcwMDcsImhvc3QiOiJnaXRodWIuY29tIn0="> - - <meta name="enabled-features" content="UNIVERSE_BANNER,MARKETPLACE_INVOICED_BILLING,MARKETPLACE_SOCIAL_PROOF_CUSTOMERS,MARKETPLACE_TRENDING_SOCIAL_PROOF,MARKETPLACE_RECOMMENDATIONS"> - - <meta name="html-safe-nonce" content="af84c43ce04aafde5136153012f871e50304f037"> - - <meta http-equiv="x-pjax-version" content="3adbd63ea2ad294c944dc0fffcb8e5b8"> - - - <link href="https://github.com/huster16/gatk-tools/commits/master.atom" rel="alternate" title="Recent Commits to gatk-tools:master" type="application/atom+xml"> - - <meta name="go-import" content="github.com/huster16/gatk-tools git https://github.com/huster16/gatk-tools.git"> - - <meta name="octolytics-dimension-user_id" content="50308301" /><meta name="octolytics-dimension-user_login" content="huster16" /><meta name="octolytics-dimension-repository_id" content="189599350" /><meta name="octolytics-dimension-repository_nwo" content="huster16/gatk-tools" /><meta name="octolytics-dimension-repository_public" content="true" /><meta name="octolytics-dimension-repository_is_fork" content="false" /><meta name="octolytics-dimension-repository_network_root_id" content="189599350" /><meta name="octolytics-dimension-repository_network_root_nwo" content="huster16/gatk-tools" /><meta name="octolytics-dimension-repository_explore_github_marketplace_ci_cta_shown" content="false" /> - - - <link rel="canonical" href="https://github.com/huster16/gatk-tools" data-pjax-transient> - - - <meta name="browser-stats-url" content="https://api.github.com/_private/browser/stats"> - - <meta name="browser-errors-url" content="https://api.github.com/_private/browser/errors"> - - <link rel="mask-icon" href="https://github.githubassets.com/pinned-octocat.svg" color="#000000"> - <link rel="icon" type="image/x-icon" class="js-site-favicon" href="https://github.githubassets.com/favicon.ico"> - -<meta name="theme-color" content="#1e2327"> - - - - - - <link rel="manifest" href="/manifest.json" crossOrigin="use-credentials"> - - </head> - - <body class="logged-out env-production min-width-lg"> - - - <div class="position-relative js-header-wrapper "> - <a href="#start-of-content" tabindex="1" class="px-2 py-4 bg-blue text-white show-on-focus js-skip-to-content">Skip to content</a> - <div id="js-pjax-loader-bar" class="pjax-loader-bar"><div class="progress"></div></div> - - - - - - - <header class="Header-old header-logged-out position-relative f4 py-2" role="banner"> - <div class="container-lg d-flex px-3"> - <div class="d-flex flex-justify-between flex-items-center"> - <a class="mr-4" href="https://github.com/" aria-label="Homepage" data-ga-click="(Logged out) Header, go to homepage, icon:logo-wordmark"> - <svg height="32" class="octicon octicon-mark-github text-white" viewBox="0 0 16 16" version="1.1" width="32" aria-hidden="true"><path fill-rule="evenodd" d="M8 0C3.58 0 0 3.58 0 8c0 3.54 2.29 6.53 5.47 7.59.4.07.55-.17.55-.38 0-.19-.01-.82-.01-1.49-2.01.37-2.53-.49-2.69-.94-.09-.23-.48-.94-.82-1.13-.28-.15-.68-.52-.01-.53.63-.01 1.08.58 1.23.82.72 1.21 1.87.87 2.33.66.07-.52.28-.87.51-1.07-1.78-.2-3.64-.89-3.64-3.95 0-.87.31-1.59.82-2.15-.08-.2-.36-1.02.08-2.12 0 0 .67-.21 2.2.82.64-.18 1.32-.27 2-.27.68 0 1.36.09 2 .27 1.53-1.04 2.2-.82 2.2-.82.44 1.1.16 1.92.08 2.12.51.56.82 1.27.82 2.15 0 3.07-1.87 3.75-3.65 3.95.29.25.54.73.54 1.48 0 1.07-.01 1.93-.01 2.2 0 .21.15.46.55.38A8.013 8.013 0 0 0 16 8c0-4.42-3.58-8-8-8z"/></svg> - </a> - </div> - - <div class="HeaderMenu HeaderMenu--logged-out d-flex flex-justify-between flex-items-center flex-auto"> - <div class="d-none"> - <button class="btn-link js-details-target" type="button" aria-label="Toggle navigation" aria-expanded="false"> - <svg height="24" class="octicon octicon-x text-gray" viewBox="0 0 12 16" version="1.1" width="18" aria-hidden="true"><path fill-rule="evenodd" d="M7.48 8l3.75 3.75-1.48 1.48L6 9.48l-3.75 3.75-1.48-1.48L4.52 8 .77 4.25l1.48-1.48L6 6.52l3.75-3.75 1.48 1.48L7.48 8z"/></svg> - </button> - </div> - - <nav class="mt-0" aria-label="Global"> - <ul class="d-flex list-style-none"> - <li class=" mr-3 mr-lg-3 edge-item-fix position-relative flex-wrap flex-justify-between d-flex flex-items-center "> - <details class="HeaderMenu-details details-overlay details-reset width-full"> - <summary class="HeaderMenu-summary HeaderMenu-link px-0 py-3 border-0 no-wrap d-inline-block"> - Why GitHub? - <svg x="0px" y="0px" viewBox="0 0 14 8" xml:space="preserve" fill="none" class="icon-chevon-down-mktg position-relative"> - <path d="M1,1l6.2,6L13,1"></path> - </svg> - </summary> - <div class="dropdown-menu flex-auto rounded-1 bg-white px-0 mt-0 p-4 left-n4 position-absolute"> - <a href="/features" class="py-2 lh-condensed-ultra d-block link-gray-dark no-underline h5 Bump-link--hover" data-ga-click="(Logged out) Header, go to Features">Features <span class="Bump-link-symbol float-right text-normal text-gray-light">→</span></a> - <ul class="list-style-none f5 pb-3"> - <li class="edge-item-fix"><a href="/features/code-review/" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Code review">Code review</a></li> - <li class="edge-item-fix"><a href="/features/project-management/" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Project management">Project management</a></li> - <li class="edge-item-fix"><a href="/features/integrations" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Integrations">Integrations</a></li> - <li class="edge-item-fix"><a href="/features/actions" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Actions">Actions</a> - <li class="edge-item-fix"><a href="/features/package-registry" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Package Registry">Package registry</a> - <li class="edge-item-fix"><a href="/features#team-management" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Team management">Team management</a></li> - <li class="edge-item-fix"><a href="/features#social-coding" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Social coding">Social coding</a></li> - <li class="edge-item-fix"><a href="/features#documentation" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Documentation">Documentation</a></li> - <li class="edge-item-fix"><a href="/features#code-hosting" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Code hosting">Code hosting</a></li> - </ul> - - <ul class="list-style-none mb-0 border-lg-top pt-lg-3"> - <li class="edge-item-fix"><a href="/customer-stories" class="py-2 lh-condensed-ultra d-block no-underline link-gray-dark no-underline h5 Bump-link--hover" data-ga-click="(Logged out) Header, go to Customer stories">Customer stories <span class="Bump-link-symbol float-right text-normal text-gray-light">→</span></a></li> - <li class="edge-item-fix"><a href="/security" class="py-2 lh-condensed-ultra d-block no-underline link-gray-dark no-underline h5 Bump-link--hover" data-ga-click="(Logged out) Header, go to Security">Security <span class="Bump-link-symbol float-right text-normal text-gray-light">→</span></a></li> - </ul> - </div> - </details> - </li> - <li class=" mr-3 mr-lg-3"> - <a href="/enterprise" class="HeaderMenu-link no-underline py-3 d-block d-lg-inline-block" data-ga-click="(Logged out) Header, go to Enterprise">Enterprise</a> - </li> - - <li class=" mr-3 mr-lg-3 edge-item-fix position-relative flex-wrap flex-justify-between d-flex flex-items-center "> - <details class="HeaderMenu-details details-overlay details-reset width-full"> - <summary class="HeaderMenu-summary HeaderMenu-link px-0 py-3 border-0 no-wrap d-inline-block"> - Explore - <svg x="0px" y="0px" viewBox="0 0 14 8" xml:space="preserve" fill="none" class="icon-chevon-down-mktg position-relative"> - <path d="M1,1l6.2,6L13,1"></path> - </svg> - </summary> - - <div class="dropdown-menu flex-auto rounded-1 bg-white px-0 pt-2 pb-0 mt-0 p-4 left-n4 position-absolute"> - <ul class="list-style-none mb-3"> - <li class="edge-item-fix"><a href="/explore" class="py-2 lh-condensed-ultra d-block link-gray-dark no-underline h5 Bump-link--hover" data-ga-click="(Logged out) Header, go to Explore">Explore GitHub <span class="Bump-link-symbol float-right text-normal text-gray-light">→</span></a></li> - </ul> - - <h4 class="text-gray-light text-normal text-mono f5 mb-2 border-top pt-3">Learn & contribute</h4> - <ul class="list-style-none mb-3"> - <li class="edge-item-fix"><a href="/topics" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Topics">Topics</a></li> - <li class="edge-item-fix"><a href="/collections" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Collections">Collections</a></li> - <li class="edge-item-fix"><a href="/trending" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Trending">Trending</a></li> - <li class="edge-item-fix"><a href="https://lab.github.com/" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Learning lab">Learning Lab</a></li> - <li class="edge-item-fix"><a href="https://opensource.guide" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Open source guides">Open source guides</a></li> - </ul> - - <h4 class="text-gray-light text-normal text-mono f5 mb-2 border-top pt-3">Connect with others</h4> - <ul class="list-style-none mb-0"> - <li class="edge-item-fix"><a href="https://github.com/events" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Events">Events</a></li> - <li class="edge-item-fix"><a href="https://github.community" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Community forum">Community forum</a></li> - <li class="edge-item-fix"><a href="https://education.github.com" class="py-2 pb-0 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to GitHub Education">GitHub Education</a></li> - </ul> - </div> - </details> - </li> - - <li class=" mr-3 mr-lg-3"> - <a href="/marketplace" class="HeaderMenu-link no-underline py-3 d-block d-lg-inline-block" data-ga-click="(Logged out) Header, go to Marketplace">Marketplace</a> - </li> - - <li class=" mr-3 mr-lg-3 edge-item-fix position-relative flex-wrap flex-justify-between d-flex flex-items-center "> - <details class="HeaderMenu-details details-overlay details-reset width-full"> - <summary class="HeaderMenu-summary HeaderMenu-link px-0 py-3 border-0 no-wrap d-inline-block"> - Pricing - <svg x="0px" y="0px" viewBox="0 0 14 8" xml:space="preserve" fill="none" class="icon-chevon-down-mktg position-relative"> - <path d="M1,1l6.2,6L13,1"></path> - </svg> - </summary> - - <div class="dropdown-menu flex-auto rounded-1 bg-white px-0 pt-2 pb-4 mt-0 p-4 left-n4 position-absolute"> - <a href="/pricing" class="pb-2 lh-condensed-ultra d-block link-gray-dark no-underline h5 Bump-link--hover" data-ga-click="(Logged out) Header, go to Pricing">Plans <span class="Bump-link-symbol float-right text-normal text-gray-light">→</span></a> - - <ul class="list-style-none mb-3"> - <li class="edge-item-fix"><a href="/pricing#feature-comparison" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Compare plans">Compare plans</a></li> - <li class="edge-item-fix"><a href="https://enterprise.github.com/contact" class="py-2 lh-condensed-ultra d-block link-gray no-underline f5" data-ga-click="(Logged out) Header, go to Contact Sales">Contact Sales</a></li> - </ul> - - <ul class="list-style-none mb-0 border-top pt-3"> - <li class="edge-item-fix"><a href="/nonprofit" class="py-2 lh-condensed-ultra d-block no-underline link-gray-dark no-underline h5 Bump-link--hover" data-ga-click="(Logged out) Header, go to Nonprofits">Nonprofit <span class="Bump-link-symbol float-right text-normal text-gray-light">→</span></a></li> - <li class="edge-item-fix"><a href="https://education.github.com" class="py-2 pb-0 lh-condensed-ultra d-block no-underline link-gray-dark no-underline h5 Bump-link--hover" data-ga-click="(Logged out) Header, go to Education">Education <span class="Bump-link-symbol float-right text-normal text-gray-light">→</span></a></li> - </ul> - </div> - </details> - </li> - </ul> - </nav> - - <div class="d-flex flex-items-center px-0 text-center text-left"> - <div class="d-lg-flex "> - <div class="header-search mr-3 scoped-search site-scoped-search js-site-search position-relative js-jump-to" - role="combobox" - aria-owns="jump-to-results" - aria-label="Search or jump to" - aria-haspopup="listbox" - aria-expanded="false" -> - <div class="position-relative"> - <!-- '"` --><!-- </textarea></xmp> --></option></form><form class="js-site-search-form" role="search" aria-label="Site" data-scope-type="Repository" data-scope-id="189599350" data-scoped-search-url="/huster16/gatk-tools/search" data-unscoped-search-url="/search" action="/huster16/gatk-tools/search" accept-charset="UTF-8" method="get"><input name="utf8" type="hidden" value="✓" /> - <label class="form-control input-sm header-search-wrapper p-0 header-search-wrapper-jump-to position-relative d-flex flex-justify-between flex-items-center js-chromeless-input-container"> - <input type="text" - class="form-control input-sm header-search-input jump-to-field js-jump-to-field js-site-search-focus js-site-search-field is-clearable" - data-hotkey="s,/" - name="q" - value="" - placeholder="Search" - data-unscoped-placeholder="Search GitHub" - data-scoped-placeholder="Search" - autocapitalize="off" - aria-autocomplete="list" - aria-controls="jump-to-results" - aria-label="Search" - data-jump-to-suggestions-path="/_graphql/GetSuggestedNavigationDestinations#csrf-token=MYscG5aOEWK5QO1LxVWdiStZpn47ml0TjWb+9OnZkh1iOu3q2lfu85ssA/51V0P5USivs11k4JXi80LyFvS0Hw==" - spellcheck="false" - autocomplete="off" - > - <input type="hidden" class="js-site-search-type-field" name="type" > - <img src="https://github.githubassets.com/images/search-key-slash.svg" alt="" class="mr-2 header-search-key-slash"> - - <div class="Box position-absolute overflow-hidden d-none jump-to-suggestions js-jump-to-suggestions-container"> - -<ul class="d-none js-jump-to-suggestions-template-container"> - - -<li class="d-flex flex-justify-start flex-items-center p-0 f5 navigation-item js-navigation-item js-jump-to-suggestion" role="option"> - <a tabindex="-1" class="no-underline d-flex flex-auto flex-items-center jump-to-suggestions-path js-jump-to-suggestion-path js-navigation-open p-2" href=""> - <div class="jump-to-octicon js-jump-to-octicon flex-shrink-0 mr-2 text-center d-none"> - <svg height="16" width="16" class="octicon octicon-repo flex-shrink-0 js-jump-to-octicon-repo d-none" title="Repository" aria-label="Repository" viewBox="0 0 12 16" version="1.1" role="img"><path fill-rule="evenodd" d="M4 9H3V8h1v1zm0-3H3v1h1V6zm0-2H3v1h1V4zm0-2H3v1h1V2zm8-1v12c0 .55-.45 1-1 1H6v2l-1.5-1.5L3 16v-2H1c-.55 0-1-.45-1-1V1c0-.55.45-1 1-1h10c.55 0 1 .45 1 1zm-1 10H1v2h2v-1h3v1h5v-2zm0-10H2v9h9V1z"/></svg> - <svg height="16" width="16" class="octicon octicon-project flex-shrink-0 js-jump-to-octicon-project d-none" title="Project" aria-label="Project" viewBox="0 0 15 16" version="1.1" role="img"><path fill-rule="evenodd" d="M10 12h3V2h-3v10zm-4-2h3V2H6v8zm-4 4h3V2H2v12zm-1 1h13V1H1v14zM14 0H1a1 1 0 0 0-1 1v14a1 1 0 0 0 1 1h13a1 1 0 0 0 1-1V1a1 1 0 0 0-1-1z"/></svg> - <svg height="16" width="16" class="octicon octicon-search flex-shrink-0 js-jump-to-octicon-search d-none" title="Search" aria-label="Search" viewBox="0 0 16 16" version="1.1" role="img"><path fill-rule="evenodd" d="M15.7 13.3l-3.81-3.83A5.93 5.93 0 0 0 13 6c0-3.31-2.69-6-6-6S1 2.69 1 6s2.69 6 6 6c1.3 0 2.48-.41 3.47-1.11l3.83 3.81c.19.2.45.3.7.3.25 0 .52-.09.7-.3a.996.996 0 0 0 0-1.41v.01zM7 10.7c-2.59 0-4.7-2.11-4.7-4.7 0-2.59 2.11-4.7 4.7-4.7 2.59 0 4.7 2.11 4.7 4.7 0 2.59-2.11 4.7-4.7 4.7z"/></svg> - </div> - - <img class="avatar mr-2 flex-shrink-0 js-jump-to-suggestion-avatar d-none" alt="" aria-label="Team" src="" width="28" height="28"> - - <div class="jump-to-suggestion-name js-jump-to-suggestion-name flex-auto overflow-hidden text-left no-wrap css-truncate css-truncate-target"> - </div> - - <div class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none js-jump-to-badge-search"> - <span class="js-jump-to-badge-search-text-default d-none" aria-label="in this repository"> - In this repository - </span> - <span class="js-jump-to-badge-search-text-global d-none" aria-label="in all of GitHub"> - All GitHub - </span> - <span aria-hidden="true" class="d-inline-block ml-1 v-align-middle">↵</span> - </div> - - <div aria-hidden="true" class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none d-on-nav-focus js-jump-to-badge-jump"> - Jump to - <span class="d-inline-block ml-1 v-align-middle">↵</span> - </div> - </a> -</li> - -</ul> - -<ul class="d-none js-jump-to-no-results-template-container"> - <li class="d-flex flex-justify-center flex-items-center f5 d-none js-jump-to-suggestion p-2"> - <span class="text-gray">No suggested jump to results</span> - </li> -</ul> - -<ul id="jump-to-results" role="listbox" class="p-0 m-0 js-navigation-container jump-to-suggestions-results-container js-jump-to-suggestions-results-container"> - - -<li class="d-flex flex-justify-start flex-items-center p-0 f5 navigation-item js-navigation-item js-jump-to-scoped-search d-none" role="option"> - <a tabindex="-1" class="no-underline d-flex flex-auto flex-items-center jump-to-suggestions-path js-jump-to-suggestion-path js-navigation-open p-2" href=""> - <div class="jump-to-octicon js-jump-to-octicon flex-shrink-0 mr-2 text-center d-none"> - <svg height="16" width="16" class="octicon octicon-repo flex-shrink-0 js-jump-to-octicon-repo d-none" title="Repository" aria-label="Repository" viewBox="0 0 12 16" version="1.1" role="img"><path fill-rule="evenodd" d="M4 9H3V8h1v1zm0-3H3v1h1V6zm0-2H3v1h1V4zm0-2H3v1h1V2zm8-1v12c0 .55-.45 1-1 1H6v2l-1.5-1.5L3 16v-2H1c-.55 0-1-.45-1-1V1c0-.55.45-1 1-1h10c.55 0 1 .45 1 1zm-1 10H1v2h2v-1h3v1h5v-2zm0-10H2v9h9V1z"/></svg> - <svg height="16" width="16" class="octicon octicon-project flex-shrink-0 js-jump-to-octicon-project d-none" title="Project" aria-label="Project" viewBox="0 0 15 16" version="1.1" role="img"><path fill-rule="evenodd" d="M10 12h3V2h-3v10zm-4-2h3V2H6v8zm-4 4h3V2H2v12zm-1 1h13V1H1v14zM14 0H1a1 1 0 0 0-1 1v14a1 1 0 0 0 1 1h13a1 1 0 0 0 1-1V1a1 1 0 0 0-1-1z"/></svg> - <svg height="16" width="16" class="octicon octicon-search flex-shrink-0 js-jump-to-octicon-search d-none" title="Search" aria-label="Search" viewBox="0 0 16 16" version="1.1" role="img"><path fill-rule="evenodd" d="M15.7 13.3l-3.81-3.83A5.93 5.93 0 0 0 13 6c0-3.31-2.69-6-6-6S1 2.69 1 6s2.69 6 6 6c1.3 0 2.48-.41 3.47-1.11l3.83 3.81c.19.2.45.3.7.3.25 0 .52-.09.7-.3a.996.996 0 0 0 0-1.41v.01zM7 10.7c-2.59 0-4.7-2.11-4.7-4.7 0-2.59 2.11-4.7 4.7-4.7 2.59 0 4.7 2.11 4.7 4.7 0 2.59-2.11 4.7-4.7 4.7z"/></svg> - </div> - - <img class="avatar mr-2 flex-shrink-0 js-jump-to-suggestion-avatar d-none" alt="" aria-label="Team" src="" width="28" height="28"> - - <div class="jump-to-suggestion-name js-jump-to-suggestion-name flex-auto overflow-hidden text-left no-wrap css-truncate css-truncate-target"> - </div> - - <div class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none js-jump-to-badge-search"> - <span class="js-jump-to-badge-search-text-default d-none" aria-label="in this repository"> - In this repository - </span> - <span class="js-jump-to-badge-search-text-global d-none" aria-label="in all of GitHub"> - All GitHub - </span> - <span aria-hidden="true" class="d-inline-block ml-1 v-align-middle">↵</span> - </div> - - <div aria-hidden="true" class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none d-on-nav-focus js-jump-to-badge-jump"> - Jump to - <span class="d-inline-block ml-1 v-align-middle">↵</span> - </div> - </a> -</li> - - - -<li class="d-flex flex-justify-start flex-items-center p-0 f5 navigation-item js-navigation-item js-jump-to-global-search d-none" role="option"> - <a tabindex="-1" class="no-underline d-flex flex-auto flex-items-center jump-to-suggestions-path js-jump-to-suggestion-path js-navigation-open p-2" href=""> - <div class="jump-to-octicon js-jump-to-octicon flex-shrink-0 mr-2 text-center d-none"> - <svg height="16" width="16" class="octicon octicon-repo flex-shrink-0 js-jump-to-octicon-repo d-none" title="Repository" aria-label="Repository" viewBox="0 0 12 16" version="1.1" role="img"><path fill-rule="evenodd" d="M4 9H3V8h1v1zm0-3H3v1h1V6zm0-2H3v1h1V4zm0-2H3v1h1V2zm8-1v12c0 .55-.45 1-1 1H6v2l-1.5-1.5L3 16v-2H1c-.55 0-1-.45-1-1V1c0-.55.45-1 1-1h10c.55 0 1 .45 1 1zm-1 10H1v2h2v-1h3v1h5v-2zm0-10H2v9h9V1z"/></svg> - <svg height="16" width="16" class="octicon octicon-project flex-shrink-0 js-jump-to-octicon-project d-none" title="Project" aria-label="Project" viewBox="0 0 15 16" version="1.1" role="img"><path fill-rule="evenodd" d="M10 12h3V2h-3v10zm-4-2h3V2H6v8zm-4 4h3V2H2v12zm-1 1h13V1H1v14zM14 0H1a1 1 0 0 0-1 1v14a1 1 0 0 0 1 1h13a1 1 0 0 0 1-1V1a1 1 0 0 0-1-1z"/></svg> - <svg height="16" width="16" class="octicon octicon-search flex-shrink-0 js-jump-to-octicon-search d-none" title="Search" aria-label="Search" viewBox="0 0 16 16" version="1.1" role="img"><path fill-rule="evenodd" d="M15.7 13.3l-3.81-3.83A5.93 5.93 0 0 0 13 6c0-3.31-2.69-6-6-6S1 2.69 1 6s2.69 6 6 6c1.3 0 2.48-.41 3.47-1.11l3.83 3.81c.19.2.45.3.7.3.25 0 .52-.09.7-.3a.996.996 0 0 0 0-1.41v.01zM7 10.7c-2.59 0-4.7-2.11-4.7-4.7 0-2.59 2.11-4.7 4.7-4.7 2.59 0 4.7 2.11 4.7 4.7 0 2.59-2.11 4.7-4.7 4.7z"/></svg> - </div> - - <img class="avatar mr-2 flex-shrink-0 js-jump-to-suggestion-avatar d-none" alt="" aria-label="Team" src="" width="28" height="28"> - - <div class="jump-to-suggestion-name js-jump-to-suggestion-name flex-auto overflow-hidden text-left no-wrap css-truncate css-truncate-target"> - </div> - - <div class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none js-jump-to-badge-search"> - <span class="js-jump-to-badge-search-text-default d-none" aria-label="in this repository"> - In this repository - </span> - <span class="js-jump-to-badge-search-text-global d-none" aria-label="in all of GitHub"> - All GitHub - </span> - <span aria-hidden="true" class="d-inline-block ml-1 v-align-middle">↵</span> - </div> - - <div aria-hidden="true" class="border rounded-1 flex-shrink-0 bg-gray px-1 text-gray-light ml-1 f6 d-none d-on-nav-focus js-jump-to-badge-jump"> - Jump to - <span class="d-inline-block ml-1 v-align-middle">↵</span> - </div> - </a> -</li> - - -</ul> - - </div> - </label> -</form> </div> -</div> - - </div> - - <a class="HeaderMenu-link no-underline mr-3" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"site header menu","repository_id":null,"auth_type":"LOG_IN","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="fd39d520055d8446e558ee9e8a4559fcf3c2707ff08aa36af3730909059570dd" data-ga-click="(Logged out) Header, clicked Sign in, text:sign-in" href="/login?return_to=%2Fhuster16%2Fgatk-tools"> - Sign in -</a> <a class="HeaderMenu-link d-inline-block no-underline border border-gray-dark rounded-1 px-2 py-1" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"site header menu","repository_id":null,"auth_type":"SIGN_UP","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="64c8aa9f44411d6847c02cf39127ae3a325a4d3950eccd853bc3d3d21f56be63" data-ga-click="(Logged out) Header, clicked Sign up, text:sign-up" href="/join"> - Sign up -</a> </div> - </div> - </div> -</header> - - </div> - - <div id="start-of-content" class="show-on-focus"></div> - - - <div id="js-flash-container"> - -</div> - - - - <div class="application-main " data-commit-hovercards-enabled> - <div itemscope itemtype="http://schema.org/SoftwareSourceCode" class=""> - <main id="js-repo-pjax-container" data-pjax-container > - - - - - - - - - <div class="pagehead repohead instapaper_ignore readability-menu experiment-repo-nav "> - <div class="repohead-details-container clearfix container"> - - <ul class="pagehead-actions"> - - - - - <li> - - <a class="tooltipped tooltipped-s btn btn-sm btn-with-count" aria-label="You must be signed in to watch a repository" rel="nofollow" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"notification subscription menu watch","repository_id":null,"auth_type":"LOG_IN","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="dbd991e234ce46fc4f62b3bc77da0c3873ee09a32e84f05236c983f8ec38e576" href="/login?return_to=%2Fhuster16%2Fgatk-tools"> - <svg class="octicon octicon-eye v-align-text-bottom" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8.06 2C3 2 0 8 0 8s3 6 8.06 6C13 14 16 8 16 8s-3-6-7.94-6zM8 12c-2.2 0-4-1.78-4-4 0-2.2 1.8-4 4-4 2.22 0 4 1.8 4 4 0 2.22-1.78 4-4 4zm2-4c0 1.11-.89 2-2 2-1.11 0-2-.89-2-2 0-1.11.89-2 2-2 1.11 0 2 .89 2 2z"/></svg> - Watch -</a> <a class="social-count" href="/huster16/gatk-tools/watchers" - aria-label="0 users are watching this repository"> - 0 - </a> - - </li> - - <li> - <a class="btn btn-sm btn-with-count tooltipped tooltipped-s" aria-label="You must be signed in to star a repository" rel="nofollow" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"star button","repository_id":189599350,"auth_type":"LOG_IN","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="7bed868485937510b69e0bc19d11023a5a1cc70d3d2d2036be837e66372ba7a0" href="/login?return_to=%2Fhuster16%2Fgatk-tools"> - <svg class="octicon octicon-star v-align-text-bottom" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M14 6l-4.9-.64L7 1 4.9 5.36 0 6l3.6 3.26L2.67 14 7 11.67 11.33 14l-.93-4.74L14 6z"/></svg> - Star -</a> - <a class="social-count js-social-count" href="/huster16/gatk-tools/stargazers" - aria-label="0 users starred this repository"> - 0 - </a> - - </li> - - <li> - <a class="btn btn-sm btn-with-count tooltipped tooltipped-s" aria-label="You must be signed in to fork a repository" rel="nofollow" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"repo details fork button","repository_id":189599350,"auth_type":"LOG_IN","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="b471484d807715f3d9e3791444007693482a90517d741978272abdc02d7df366" href="/login?return_to=%2Fhuster16%2Fgatk-tools"> - <svg class="octicon octicon-repo-forked v-align-text-bottom" viewBox="0 0 10 16" version="1.1" width="10" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8 1a1.993 1.993 0 0 0-1 3.72V6L5 8 3 6V4.72A1.993 1.993 0 0 0 2 1a1.993 1.993 0 0 0-1 3.72V6.5l3 3v1.78A1.993 1.993 0 0 0 5 15a1.993 1.993 0 0 0 1-3.72V9.5l3-3V4.72A1.993 1.993 0 0 0 8 1zM2 4.2C1.34 4.2.8 3.65.8 3c0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2zm3 10c-.66 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2zm3-10c-.66 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2z"/></svg> - Fork -</a> - <a href="/huster16/gatk-tools/network/members" class="social-count" - aria-label="0 users forked this repository"> - 0 - </a> - </li> -</ul> - - <h1 class="public "> - <svg class="octicon octicon-repo" viewBox="0 0 12 16" version="1.1" width="12" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M4 9H3V8h1v1zm0-3H3v1h1V6zm0-2H3v1h1V4zm0-2H3v1h1V2zm8-1v12c0 .55-.45 1-1 1H6v2l-1.5-1.5L3 16v-2H1c-.55 0-1-.45-1-1V1c0-.55.45-1 1-1h10c.55 0 1 .45 1 1zm-1 10H1v2h2v-1h3v1h5v-2zm0-10H2v9h9V1z"/></svg> - <span class="author" itemprop="author"><a class="url fn" rel="author" data-hovercard-type="user" data-hovercard-url="/hovercards?user_id=50308301" data-octo-click="hovercard-link-click" data-octo-dimensions="link_type:self" href="/huster16">huster16</a></span><!-- ---><span class="path-divider">/</span><!-- ---><strong itemprop="name"><a data-pjax="#js-repo-pjax-container" href="/huster16/gatk-tools">gatk-tools</a></strong> - - -</h1> - - </div> - -<nav class="hx_reponav reponav js-repo-nav js-sidenav-container-pjax container" - itemscope - itemtype="http://schema.org/BreadcrumbList" - aria-label="Repository" - data-pjax="#js-repo-pjax-container"> - - <span itemscope itemtype="http://schema.org/ListItem" itemprop="itemListElement"> - <a class="js-selected-navigation-item selected reponav-item" itemprop="url" data-hotkey="g c" aria-current="page" data-selected-links="repo_source repo_downloads repo_commits repo_releases repo_tags repo_branches repo_packages /huster16/gatk-tools" href="/huster16/gatk-tools"> - <svg class="octicon octicon-code" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M9.5 3L8 4.5 11.5 8 8 11.5 9.5 13 14 8 9.5 3zm-5 0L0 8l4.5 5L6 11.5 2.5 8 6 4.5 4.5 3z"/></svg> - <span itemprop="name">Code</span> - <meta itemprop="position" content="1"> -</a> </span> - - <span itemscope itemtype="http://schema.org/ListItem" itemprop="itemListElement"> - <a itemprop="url" data-hotkey="g i" class="js-selected-navigation-item reponav-item" data-selected-links="repo_issues repo_labels repo_milestones /huster16/gatk-tools/issues" href="/huster16/gatk-tools/issues"> - <svg class="octicon octicon-issue-opened" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M7 2.3c3.14 0 5.7 2.56 5.7 5.7s-2.56 5.7-5.7 5.7A5.71 5.71 0 0 1 1.3 8c0-3.14 2.56-5.7 5.7-5.7zM7 1C3.14 1 0 4.14 0 8s3.14 7 7 7 7-3.14 7-7-3.14-7-7-7zm1 3H6v5h2V4zm0 6H6v2h2v-2z"/></svg> - <span itemprop="name">Issues</span> - <span class="Counter">0</span> - <meta itemprop="position" content="2"> -</a> </span> - - <span itemscope itemtype="http://schema.org/ListItem" itemprop="itemListElement"> - <a data-hotkey="g p" itemprop="url" class="js-selected-navigation-item reponav-item" data-selected-links="repo_pulls checks /huster16/gatk-tools/pulls" href="/huster16/gatk-tools/pulls"> - <svg class="octicon octicon-git-pull-request" viewBox="0 0 12 16" version="1.1" width="12" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M11 11.28V5c-.03-.78-.34-1.47-.94-2.06C9.46 2.35 8.78 2.03 8 2H7V0L4 3l3 3V4h1c.27.02.48.11.69.31.21.2.3.42.31.69v6.28A1.993 1.993 0 0 0 10 15a1.993 1.993 0 0 0 1-3.72zm-1 2.92c-.66 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2zM4 3c0-1.11-.89-2-2-2a1.993 1.993 0 0 0-1 3.72v6.56A1.993 1.993 0 0 0 2 15a1.993 1.993 0 0 0 1-3.72V4.72c.59-.34 1-.98 1-1.72zm-.8 10c0 .66-.55 1.2-1.2 1.2-.65 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2zM2 4.2C1.34 4.2.8 3.65.8 3c0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2z"/></svg> - <span itemprop="name">Pull requests</span> - <span class="Counter">0</span> - <meta itemprop="position" content="3"> -</a> </span> - - - <a data-hotkey="g b" class="js-selected-navigation-item reponav-item" data-selected-links="repo_projects new_repo_project repo_project /huster16/gatk-tools/projects" href="/huster16/gatk-tools/projects"> - <svg class="octicon octicon-project" viewBox="0 0 15 16" version="1.1" width="15" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M10 12h3V2h-3v10zm-4-2h3V2H6v8zm-4 4h3V2H2v12zm-1 1h13V1H1v14zM14 0H1a1 1 0 0 0-1 1v14a1 1 0 0 0 1 1h13a1 1 0 0 0 1-1V1a1 1 0 0 0-1-1z"/></svg> - Projects - <span class="Counter" >0</span> -</a> - - - <a data-skip-pjax="true" class="js-selected-navigation-item reponav-item" data-selected-links="security alerts policy /huster16/gatk-tools/security/advisories" href="/huster16/gatk-tools/security/advisories"> - <svg xmlns="http://www.w3.org/2000/svg" viewBox="0 0 16 16" class="octicon" height="16px" width="16px"> - <path fill-rule="evenodd" clip-rule="evenodd" d="M1 2l7-2 7 2v6.02C15 12.69 9.69 16 8 16c-1.69 0-7-3.31-7-7.98V2zm1 .75L8 1l6 1.75v5.268C14 12.104 9.45 15 8 15c-1.45 0-6-2.896-6-6.982V2.75z"></path> - <path d="M3 3.5L8 2v12c-1.207 0-5-2.482-5-5.985V3.5z"></path> -</svg> - - Security -</a> - <a class="js-selected-navigation-item reponav-item" data-selected-links="repo_graphs repo_contributors dependency_graph pulse people /huster16/gatk-tools/pulse" href="/huster16/gatk-tools/pulse"> - <svg class="octicon octicon-graph" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M16 14v1H0V0h1v14h15zM5 13H3V8h2v5zm4 0H7V3h2v10zm4 0h-2V6h2v7z"/></svg> - Insights -</a> - -</nav> - - - </div> -<div class="container new-discussion-timeline experiment-repo-nav "> - <div class="repository-content "> - - - - <div class="signup-prompt-bg rounded-1"> - <div class="signup-prompt p-4 text-center mb-4 rounded-1"> - <div class="position-relative"> - <!-- '"` --><!-- </textarea></xmp> --></option></form><form action="/prompt_dismissals/signup" accept-charset="UTF-8" method="post"><input name="utf8" type="hidden" value="✓" /><input type="hidden" name="_method" value="put" /><input type="hidden" name="authenticity_token" value="C347xA/wfN9S1Brf3jkG7GCKplNmZoFerGeOImNxa8PZNsinckqKBCSoP2KYkwLIig6M6En5RG5kpxHsZ8OJYQ==" /> - <button type="submit" class="position-absolute top-0 right-0 btn-link link-gray" data-ga-click="(Logged out) Sign up prompt, clicked Dismiss, text:dismiss"> - Dismiss - </button> -</form> <h3 class="pt-2">Join GitHub today</h3> - <p class="col-6 mx-auto">GitHub is home to over 36 million developers working together to host and review code, manage projects, and build software together.</p> - <a class="btn btn-primary" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"files signup prompt","repository_id":null,"auth_type":"SIGN_UP","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="eeb4f110f9edd5a734bf991fd9dfa730510b25158f8871a8f3270dc219a0e7bc" data-ga-click="(Logged out) Sign up prompt, clicked Sign up, text:sign-up" href="/join?source=prompt-code">Sign up</a> - </div> - </div> - </div> - - - - <div class="d-flex flex-items-start"> - <div class="flex-auto mb-3"> <div class="f4"> - <em class="d-block text-gray"> - No description, website, or topics provided. - </em> - </div> -</div> - </div> - - - - - <div class="overall-summary overall-summary-bottomless"> - <div class="stats-switcher-viewport js-stats-switcher-viewport"> - <div class="stats-switcher-wrapper"> - <ul class="numbers-summary"> - <li class="commits"> - <a data-pjax href="/huster16/gatk-tools/commits/master"> - <svg class="octicon octicon-history" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8 13H6V6h5v2H8v5zM7 1C4.81 1 2.87 2.02 1.59 3.59L0 2v4h4L2.5 4.5C3.55 3.17 5.17 2.3 7 2.3c3.14 0 5.7 2.56 5.7 5.7s-2.56 5.7-5.7 5.7A5.71 5.71 0 0 1 1.3 8c0-.34.03-.67.09-1H.08C.03 7.33 0 7.66 0 8c0 3.86 3.14 7 7 7s7-3.14 7-7-3.14-7-7-7z"/></svg> - <span class="num text-emphasized"> - 4 - </span> - commits - </a> - </li> - <li> - <a data-pjax href="/huster16/gatk-tools/branches"> - <svg class="octicon octicon-git-branch" viewBox="0 0 10 16" version="1.1" width="10" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M10 5c0-1.11-.89-2-2-2a1.993 1.993 0 0 0-1 3.72v.3c-.02.52-.23.98-.63 1.38-.4.4-.86.61-1.38.63-.83.02-1.48.16-2 .45V4.72a1.993 1.993 0 0 0-1-3.72C.88 1 0 1.89 0 3a2 2 0 0 0 1 1.72v6.56c-.59.35-1 .99-1 1.72 0 1.11.89 2 2 2 1.11 0 2-.89 2-2 0-.53-.2-1-.53-1.36.09-.06.48-.41.59-.47.25-.11.56-.17.94-.17 1.05-.05 1.95-.45 2.75-1.25S8.95 7.77 9 6.73h-.02C9.59 6.37 10 5.73 10 5zM2 1.8c.66 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2C1.35 4.2.8 3.65.8 3c0-.65.55-1.2 1.2-1.2zm0 12.41c-.66 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2zm6-8c-.66 0-1.2-.55-1.2-1.2 0-.65.55-1.2 1.2-1.2.65 0 1.2.55 1.2 1.2 0 .65-.55 1.2-1.2 1.2z"/></svg> - <span class="num text-emphasized"> - 1 - </span> - branch - </a> - </li> - - <li> - <a href="/huster16/gatk-tools/releases"> - <svg class="octicon octicon-tag" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M7.73 1.73C7.26 1.26 6.62 1 5.96 1H3.5C2.13 1 1 2.13 1 3.5v2.47c0 .66.27 1.3.73 1.77l6.06 6.06c.39.39 1.02.39 1.41 0l4.59-4.59a.996.996 0 0 0 0-1.41L7.73 1.73zM2.38 7.09c-.31-.3-.47-.7-.47-1.13V3.5c0-.88.72-1.59 1.59-1.59h2.47c.42 0 .83.16 1.13.47l6.14 6.13-4.73 4.73-6.13-6.15zM3.01 3h2v2H3V3h.01z"/></svg> - <span class="num text-emphasized"> - 0 - </span> - releases - </a> - </li> - - - <li > - <include-fragment src="/huster16/gatk-tools/contributors_size"> - <a href="/huster16/gatk-tools/graphs/contributors"> - <svg class="octicon octicon-organization" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M16 12.999c0 .439-.45 1-1 1H7.995c-.539 0-.994-.447-.995-.999H1c-.54 0-1-.561-1-1 0-2.634 3-4 3-4s.229-.409 0-1c-.841-.621-1.058-.59-1-3 .058-2.419 1.367-3 2.5-3s2.442.58 2.5 3c.058 2.41-.159 2.379-1 3-.229.59 0 1 0 1s1.549.711 2.42 2.088C9.196 9.369 10 8.999 10 8.999s.229-.409 0-1c-.841-.62-1.058-.59-1-3 .058-2.419 1.367-3 2.5-3s2.437.581 2.495 3c.059 2.41-.158 2.38-1 3-.229.59 0 1 0 1s3.005 1.366 3.005 4z"/></svg> - <span class="num text-emphasized"></span> - Fetching contributors - </a> -</include-fragment> </li> - - <li> - <a href="/huster16/gatk-tools/blob/master/LICENSE"> - <svg class="octicon octicon-law" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M7 4c-.83 0-1.5-.67-1.5-1.5S6.17 1 7 1s1.5.67 1.5 1.5S7.83 4 7 4zm7 6c0 1.11-.89 2-2 2h-1c-1.11 0-2-.89-2-2l2-4h-1c-.55 0-1-.45-1-1H8v8c.42 0 1 .45 1 1h1c.42 0 1 .45 1 1H3c0-.55.58-1 1-1h1c0-.55.58-1 1-1h.03L6 5H5c0 .55-.45 1-1 1H3l2 4c0 1.11-.89 2-2 2H2c-1.11 0-2-.89-2-2l2-4H1V5h3c0-.55.45-1 1-1h4c.55 0 1 .45 1 1h3v1h-1l2 4zM2.5 7L1 10h3L2.5 7zM13 10l-1.5-3-1.5 3h3z"/></svg> - Apache-2.0 - </a> - </li> - </ul> - - <div class="repository-lang-stats"> - <ol class="repository-lang-stats-numbers"> - <li> - <a href="/huster16/gatk-tools/search?l=xslt" data-ga-click="Repository, language stats search click, location:repo overview"> - <span class="color-block language-color" style="background-color:#EB8CEB;"></span> - <span class="lang">XSLT</span> - <span class="percent">75.2%</span> - </a> - </li> - <li> - <a href="/huster16/gatk-tools/search?l=python" data-ga-click="Repository, language stats search click, location:repo overview"> - <span class="color-block language-color" style="background-color:#3572A5;"></span> - <span class="lang">Python</span> - <span class="percent">24.8%</span> - </a> - </li> - </ol> - </div> - </div> - </div> - </div> - - <button type="button" class="d-flex p-0 repository-lang-stats-graph js-toggle-lang-stats" title="Click for language details" data-ga-click="Repository, language bar stats toggle, location:repo overview"> - <span class="language-color" aria-label="XSLT 75.2%" style="width:75.2%; background-color:#EB8CEB;" itemprop="keywords">XSLT</span> - <span class="language-color" aria-label="Python 24.8%" style="width:24.8%; background-color:#3572A5;" itemprop="keywords">Python</span> - </button> - - - - - - - <div class="file-navigation in-mid-page d-flex flex-items-start"> - -<details class="details-reset details-overlay select-menu branch-select-menu hx_rsm" id="branch-select-menu"> - <summary class="btn btn-sm select-menu-button css-truncate" - data-hotkey="w" - - title="Switch branches or tags"> - <i>Branch:</i> - <span class="css-truncate-target">master</span> - </summary> - - <details-menu class="select-menu-modal hx_rsm-modal position-absolute" style="z-index: 99;" src="/huster16/gatk-tools/ref-list/master?source_action=disambiguate&source_controller=files" preload> - <include-fragment class="select-menu-loading-overlay anim-pulse"> - <svg height="32" class="octicon octicon-octoface" viewBox="0 0 16 16" version="1.1" width="32" aria-hidden="true"><path fill-rule="evenodd" d="M14.7 5.34c.13-.32.55-1.59-.13-3.31 0 0-1.05-.33-3.44 1.3-1-.28-2.07-.32-3.13-.32s-2.13.04-3.13.32c-2.39-1.64-3.44-1.3-3.44-1.3-.68 1.72-.26 2.99-.13 3.31C.49 6.21 0 7.33 0 8.69 0 13.84 3.33 15 7.98 15S16 13.84 16 8.69c0-1.36-.49-2.48-1.3-3.35zM8 14.02c-3.3 0-5.98-.15-5.98-3.35 0-.76.38-1.48 1.02-2.07 1.07-.98 2.9-.46 4.96-.46 2.07 0 3.88-.52 4.96.46.65.59 1.02 1.3 1.02 2.07 0 3.19-2.68 3.35-5.98 3.35zM5.49 9.01c-.66 0-1.2.8-1.2 1.78s.54 1.79 1.2 1.79c.66 0 1.2-.8 1.2-1.79s-.54-1.78-1.2-1.78zm5.02 0c-.66 0-1.2.79-1.2 1.78s.54 1.79 1.2 1.79c.66 0 1.2-.8 1.2-1.79s-.53-1.78-1.2-1.78z"/></svg> - </include-fragment> - </details-menu> -</details> - - - <button type="button" class="btn btn-sm disabled tooltipped tooltipped-n new-pull-request-btn" aria-label="You must be signed in to create a pull request"> - New pull request - </button> - - <div class="breadcrumb flex-auto"> - - </div> - - <div class="BtnGroup"> - - <a class="btn btn-sm empty-icon float-right BtnGroup-item" data-hydro-click="{"event_type":"repository.click","payload":{"target":"FIND_FILE_BUTTON","repository_id":189599350,"client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="2202b3ffe5544f8163f8b93af3713fc7029c4f471879a84fe8f338309f52faab" data-ga-click="Repository, find file, location:repo overview" data-hotkey="t" data-pjax="true" href="/huster16/gatk-tools/find/master">Find File</a> - </div> - - - - - <details class="get-repo-select-menu js-get-repo-select-menu js-anon-get-repo-select-menu position-relative details-overlay details-reset"> - <summary class="btn btn-sm ml-2 btn-primary" data-hydro-click="{"event_type":"repository.click","payload":{"repository_id":189599350,"target":"CLONE_OR_DOWNLOAD_BUTTON","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="4525d521fa4701080dc4256fee3f654f20406206ba9f433f0e4d0b3ce8e26964"> - Clone or download - <span class="dropdown-caret"></span> -</summary> <div class="position-relative"> - <div class="get-repo-modal dropdown-menu dropdown-menu-sw pb-0 js-toggler-container js-get-repo-modal"> - - <div class="get-repo-modal-options"> - <div class="clone-options https-clone-options"> - - <h4 class="mb-1"> - Clone with HTTPS - <a class="muted-link" href="https://help.github.com/articles/which-remote-url-should-i-use" target="_blank" title="Which remote URL should I use?"> - <svg class="octicon octicon-question" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M6 10h2v2H6v-2zm4-3.5C10 8.64 8 9 8 9H6c0-.55.45-1 1-1h.5c.28 0 .5-.22.5-.5v-1c0-.28-.22-.5-.5-.5h-1c-.28 0-.5.22-.5.5V7H4c0-1.5 1.5-3 3-3s3 1 3 2.5zM7 2.3c3.14 0 5.7 2.56 5.7 5.7s-2.56 5.7-5.7 5.7A5.71 5.71 0 0 1 1.3 8c0-3.14 2.56-5.7 5.7-5.7zM7 1C3.14 1 0 4.14 0 8s3.14 7 7 7 7-3.14 7-7-3.14-7-7-7z"/></svg> - </a> - </h4> - <p class="mb-2 get-repo-decription-text"> - Use Git or checkout with SVN using the web URL. - </p> - - <div class="input-group"> - <input type="text" class="form-control input-monospace input-sm" data-autoselect value="https://github.com/huster16/gatk-tools.git" aria-label="Clone this repository at https://github.com/huster16/gatk-tools.git" readonly> - <div class="input-group-button"> - <clipboard-copy value="https://github.com/huster16/gatk-tools.git" aria-label="Copy to clipboard" class="btn btn-sm" data-hydro-click="{"event_type":"clone_or_download.click","payload":{"feature_clicked":"COPY_URL","git_repository_type":"REPOSITORY","repository_id":189599350,"client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="11678c39c42eee5608601cea62776722ddc19e672194910a3f7e339e0c1dd6e6"><svg class="octicon octicon-clippy" viewBox="0 0 14 16" version="1.1" width="14" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M2 13h4v1H2v-1zm5-6H2v1h5V7zm2 3V8l-3 3 3 3v-2h5v-2H9zM4.5 9H2v1h2.5V9zM2 12h2.5v-1H2v1zm9 1h1v2c-.02.28-.11.52-.3.7-.19.18-.42.28-.7.3H1c-.55 0-1-.45-1-1V4c0-.55.45-1 1-1h3c0-1.11.89-2 2-2 1.11 0 2 .89 2 2h3c.55 0 1 .45 1 1v5h-1V6H1v9h10v-2zM2 5h8c0-.55-.45-1-1-1H8c-.55 0-1-.45-1-1s-.45-1-1-1-1 .45-1 1-.45 1-1 1H3c-.55 0-1 .45-1 1z"/></svg></clipboard-copy> - </div> -</div> - - </div> - - <div class="mt-2"> - -<a class="btn btn-outline get-repo-btn js-anon-download-zip-link " rel="nofollow" data-hydro-click="{"event_type":"clone_or_download.click","payload":{"feature_clicked":"DOWNLOAD_ZIP","git_repository_type":"REPOSITORY","repository_id":189599350,"client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="f38afae5eed2525a512560364e73cf9629a62f093e6936acc841e643eb1f6dc8" data-ga-click="Repository, download zip, location:repo overview" href="/huster16/gatk-tools/archive/master.zip">Download ZIP</a> - - </div> - </div> - - <div class="js-modal-downloading" hidden> - <div class="py-2 px-3"> - <h4 class="lh-condensed mb-3">Downloading<span class="animated-ellipsis-container"><span class="animated-ellipsis">...</span></span></h4> - <p class="text-gray"> - Want to be notified of new releases in - <span class="text-bold">huster16/gatk-tools</span>? - </p> - </div> - <div class="width-full d-flex"> - <a rel="nofollow" class="get-repo-btn btn btn-outline" style="width: 50%" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"download popover","repository_id":189599350,"auth_type":"LOG_IN","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="cb61463cc7655c64c1c248161ce77d7b3d3c314ea70146f402f8c7d75b0680e3" href="/login?return_to=https%3A%2F%2Fgithub.com%2Fhuster16%2Fgatk-tools">Sign in</a> - <a rel="nofollow" class="get-repo-btn btn btn-primary" style="width: 50%" data-hydro-click="{"event_type":"authentication.click","payload":{"location_in_page":"download popover","repository_id":189599350,"auth_type":"SIGN_UP","client_id":null,"originating_request_id":"9296:3F63:B1FBFC:1321364:5CF25B7F","originating_url":"https://github.com/huster16/gatk-tools","referrer":null,"user_id":null}}" data-hydro-click-hmac="4de2cd77e5bd2d2867a7b2d5a861644713963b0a7cf6f57303dd2946291b114e" href="/join?return_to=%2Fhuster16%2Fgatk-tools">Sign up</a> - </div> - </div> - - <div class="js-modal-download-mac py-2 px-3 d-none"> - <h4 class="lh-condensed mb-3">Launching GitHub Desktop<span class="animated-ellipsis-container"><span class="animated-ellipsis">...</span></span></h4> - <p class="text-gray">If nothing happens, <a href="https://desktop.github.com/">download GitHub Desktop</a> and try again.</p> - <p><button class="btn-link js-get-repo-modal-download-back">Go back</button></p> - </div> - - <div class="js-modal-download-windows py-2 px-3 d-none"> - <h4 class="lh-condensed mb-3">Launching GitHub Desktop<span class="animated-ellipsis-container"><span class="animated-ellipsis">...</span></span></h4> - <p class="text-gray">If nothing happens, <a href="https://desktop.github.com/">download GitHub Desktop</a> and try again.</p> - <p><button class="btn-link js-get-repo-modal-download-back">Go back</button></p> - </div> - - <div class="js-modal-download-xcode py-2 px-3 d-none"> - <h4 class="lh-condensed mb-3">Launching Xcode<span class="animated-ellipsis-container"><span class="animated-ellipsis">...</span></span></h4> - <p class="text-gray">If nothing happens, <a href="https://developer.apple.com/xcode/">download Xcode</a> and try again.</p> - <p><button class="btn-link js-get-repo-modal-download-back">Go back</button></p> - </div> - - <div class="js-modal-download-visual-studio py-2 px-3 d-none"> - <h4 class="lh-condensed mb-3">Launching Visual Studio<span class="animated-ellipsis-container"><span class="animated-ellipsis">...</span></span></h4> - <p class="text-gray">If nothing happens, <a href="https://visualstudio.github.com/">download the GitHub extension for Visual Studio</a> and try again.</p> - <p><button class="btn-link js-get-repo-modal-download-back">Go back</button></p> - </div> - - </div> - </div> -</details> - -</div> - - - - -<include-fragment src="/huster16/gatk-tools/tree-commit/8396208ba320ef1f0cd4b6b02607a2d2aae5f760" class="commit-tease commit-loader"> - <div class="blank loader-loading"> - <img alt="" class="loader" src="https://github.githubassets.com/images/spinners/octocat-spinner-32-EAF2F5.gif" width="16" height="16" /> - Fetching latest commit… - </div> - <div class="loader-error"> - Cannot retrieve the latest commit at this time. - </div> -</include-fragment> - - -<include-fragment class="file-wrap" src="/huster16/gatk-tools/file-list/master"> - <a class="d-none js-permalink-shortcut" data-hotkey="y" href="/huster16/gatk-tools/tree/8396208ba320ef1f0cd4b6b02607a2d2aae5f760">Permalink</a> - - <table class="files js-navigation-container js-active-navigation-container" data-pjax> - <thead> - <tr> - <th><span class="sr-only">Type</span></th> - <th><span class="sr-only">Name</span></th> - <th><span class="sr-only">Latest commit message</span></th> - <th><span class="sr-only">Commit time</span></th> - </tr> - </thead> - - - <tbody> - <tr class="warning include-fragment-error"> - <td class="icon"><svg class="octicon octicon-alert" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8.893 1.5c-.183-.31-.52-.5-.887-.5s-.703.19-.886.5L.138 13.499a.98.98 0 0 0 0 1.001c.193.31.53.501.886.501h13.964c.367 0 .704-.19.877-.5a1.03 1.03 0 0 0 .01-1.002L8.893 1.5zm.133 11.497H6.987v-2.003h2.039v2.003zm0-3.004H6.987V5.987h2.039v4.006z"/></svg></td> - <td class="content" colspan="3">Failed to load latest commit information.</td> - </tr> - - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="directory" class="octicon octicon-file-directory" viewBox="0 0 14 16" version="1.1" width="14" height="16" role="img"><path fill-rule="evenodd" d="M13 4H7V3c0-.66-.31-1-1-1H1c-.55 0-1 .45-1 1v10c0 .55.45 1 1 1h12c.55 0 1-.45 1-1V5c0-.55-.45-1-1-1zM6 4H1V3h5v1z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="generation" id="9cb9ce5bd9e807867d42a740c9633fc7-3625a25873af83c0541afd8f95fc07be91aabe3a" href="/huster16/gatk-tools/tree/master/generation">generation</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="directory" class="octicon octicon-file-directory" viewBox="0 0 14 16" version="1.1" width="14" height="16" role="img"><path fill-rule="evenodd" d="M13 4H7V3c0-.66-.31-1-1-1H1c-.55 0-1 .45-1 1v10c0 .55.45 1 1 1h12c.55 0 1-.45 1-1V5c0-.55-.45-1-1-1zM6 4H1V3h5v1z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="tool-data" id="cacc76c3f8e5d46af3e9a108d7a64298-a54d24bc89b721726d1816c1d84b612e87530b2c" href="/huster16/gatk-tools/tree/master/tool-data">tool-data</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title=".shed.yml" id="cdcc89357908fc034bde629890b000b5-2325e6cb39480ba78f39c79f6c003dbd1e31d57f" href="/huster16/gatk-tools/blob/master/.shed.yml">.shed.yml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="LICENSE" id="9879d6db96fd29134fc802214163b95a-261eeb9e9f8b2b4b0d119366dda99c6fd7d35c64" itemprop="license" href="/huster16/gatk-tools/blob/master/LICENSE">LICENSE</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="README" id="c47c7c7383225ab55ff591cb59c41e6b-a8addefe468edbe7d68593ece5e8aa412b4899ff" href="/huster16/gatk-tools/blob/master/README">README</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="analyze_covariates.xml" id="59610722be95a0212262688dcbf7c239-2e2bbaf59e3a3ca897dbc81ce2bd795b9d42325f" href="/huster16/gatk-tools/blob/master/analyze_covariates.xml">analyze_covariates.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="base_recalibrator.xml" id="48bdf74141faebe19e0066be8cd87dd5-7317df4b6cf2302f9127fd576bc4ae33f4492009" href="/huster16/gatk-tools/blob/master/base_recalibrator.xml">base_recalibrator.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="combine_gvcfs.xml" id="5a42bf8ebd8f0473dfab105bce4454bd-8f5dab6ecfcf6eecdc49559973a0f517c7ce51fe" href="/huster16/gatk-tools/blob/master/combine_gvcfs.xml">combine_gvcfs.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="combine_variants.xml" id="27122924aa0d6acdcda3d1a0fdd0ca79-9f7532b3fd7b7bc45137cdb66ad4deadbf2637be" href="/huster16/gatk-tools/blob/master/combine_variants.xml">combine_variants.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="gatk.xml" id="6aeaf5662a51985b4f74c250a5ccefa2-715530fdb731605326741b7f0e5da00bfaea2c70" href="/huster16/gatk-tools/blob/master/gatk.xml">gatk.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="gatk_macros.xml" id="e86fbc71297931c373dc3c1ebbc5aa9b-0edfc715939f63ad66fd7e4555ecac6bc3623748" href="/huster16/gatk-tools/blob/master/gatk_macros.xml">gatk_macros.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="genotype_gvcfs.xml" id="0372ebae7a90c232ee5e7536d5fc3d71-18e615ecb169da998a8246b66159d1c6819ef222" href="/huster16/gatk-tools/blob/master/genotype_gvcfs.xml">genotype_gvcfs.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="haplotype_caller.xml" id="3ba21ca32b06283a30eaa19f3d2aacb7-0fddf817930f1bfbd2c286514af781a06edf1fe0" href="/huster16/gatk-tools/blob/master/haplotype_caller.xml">haplotype_caller.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="indel_realigner.xml" id="e7b986d614bb6b302bf2fc4aa93817d0-6c46b5cf10b2b57e641689d5474b80f538bc11bc" href="/huster16/gatk-tools/blob/master/indel_realigner.xml">indel_realigner.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="print_reads.xml" id="084bb1c569888ece53345b6d80b919d7-19269244ac276c5ac4c3ea35d88a0faa1c63dbf1" href="/huster16/gatk-tools/blob/master/print_reads.xml">print_reads.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="realigner_target_creator.xml" id="00d1312b6f84e2192f19921c8e5e53d7-86621b8b4cbbf521fa5741f6fecc16f87c810c1d" href="/huster16/gatk-tools/blob/master/realigner_target_creator.xml">realigner_target_creator.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="tool_data_table_conf.xml.sample" id="60160a6e4efd651b475bcbf960abcc2d-b0e4b46b92ceb44e50c9abf01cf31db95628ac93" href="/huster16/gatk-tools/blob/master/tool_data_table_conf.xml.sample">tool_data_table_conf.xml.sample</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - <tr class="js-navigation-item"> - <td class="icon"> - <svg aria-label="file" class="octicon octicon-file" viewBox="0 0 12 16" version="1.1" width="12" height="16" role="img"><path fill-rule="evenodd" d="M6 5H2V4h4v1zM2 8h7V7H2v1zm0 2h7V9H2v1zm0 2h7v-1H2v1zm10-7.5V14c0 .55-.45 1-1 1H1c-.55 0-1-.45-1-1V2c0-.55.45-1 1-1h7.5L12 4.5zM11 5L8 2H1v12h10V5z"/></svg> - <img width="16" height="16" class="spinner" alt="" src="https://github.githubassets.com/images/spinners/octocat-spinner-32.gif" /> - </td> - <td class="content"> - <span class="css-truncate css-truncate-target"><a class="js-navigation-open" title="tool_dependencies.xml" id="1f1e2fcbf1ddc07a88bc59ca246c9a90-3ac9ffc6df38d4633e8022ed0b78e3c95e586b10" href="/huster16/gatk-tools/blob/master/tool_dependencies.xml">tool_dependencies.xml</a></span> - </td> - <td class="message"> - <span class="css-truncate css-truncate-target"> - </span> - </td> - <td class="age"> - <span class="css-truncate css-truncate-target"></span> - </td> - </tr> - </tbody> - </table> - -</include-fragment> - - - - <div id="readme" class="Box Box--condensed instapaper_body js-code-block-container"> - <div class="Box-header d-flex flex-items-center flex-justify-between px-2"> - <h3 class="Box-title pr-3"> - <svg class="octicon octicon-book" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M3 5h4v1H3V5zm0 3h4V7H3v1zm0 2h4V9H3v1zm11-5h-4v1h4V5zm0 2h-4v1h4V7zm0 2h-4v1h4V9zm2-6v9c0 .55-.45 1-1 1H9.5l-1 1-1-1H2c-.55 0-1-.45-1-1V3c0-.55.45-1 1-1h5.5l1 1 1-1H15c.55 0 1 .45 1 1zm-8 .5L7.5 3H2v9h6V3.5zm7-.5H9.5l-.5.5V12h6V3z"/></svg> - README - </h3> - </div> - <div class="Box-body"> - <div class="plain"><pre style="white-space: pre-wrap">Installation note: -A GATK license needs to be obtained separately from the Broad Institute (<a href="https://www.broadinstitute.org/gatk/" rel="nofollow">https://www.broadinstitute.org/gatk/</a>) -to be able to use this tool. Once the license is obtained, the GATK Jar file must then be downloaded and moved -to /mnt/galaxy/tools/GATK/x.x-x on the server. Substitute the appropriate version number in the file path. -Be sure to download the correct version of the Jar file for the toolshed version installed. -</pre></div> - </div> - </div> - - - - </div> - <div class="modal-backdrop js-touch-events"></div> -</div> - - </main> - </div> - - - </div> - - -<div class="footer container-lg width-full px-3" role="contentinfo"> - <div class="position-relative d-flex flex-justify-between pt-6 pb-2 mt-6 f6 text-gray border-top border-gray-light "> - <ul class="list-style-none d-flex flex-wrap "> - <li class="mr-3">© 2019 <span title="0.27328s from unicorn-68fcf5fc59-q8f8h">GitHub</span>, Inc.</li> - <li class="mr-3"><a data-ga-click="Footer, go to terms, text:terms" href="https://github.com/site/terms">Terms</a></li> - <li class="mr-3"><a data-ga-click="Footer, go to privacy, text:privacy" href="https://github.com/site/privacy">Privacy</a></li> - <li class="mr-3"><a data-ga-click="Footer, go to security, text:security" href="https://github.com/security">Security</a></li> - <li class="mr-3"><a href="https://githubstatus.com/" data-ga-click="Footer, go to status, text:status">Status</a></li> - <li><a data-ga-click="Footer, go to help, text:help" href="https://help.github.com">Help</a></li> - </ul> - - <a aria-label="Homepage" title="GitHub" class="footer-octicon d-none d-lg-block mx-lg-4" href="https://github.com"> - <svg height="24" class="octicon octicon-mark-github" viewBox="0 0 16 16" version="1.1" width="24" aria-hidden="true"><path fill-rule="evenodd" d="M8 0C3.58 0 0 3.58 0 8c0 3.54 2.29 6.53 5.47 7.59.4.07.55-.17.55-.38 0-.19-.01-.82-.01-1.49-2.01.37-2.53-.49-2.69-.94-.09-.23-.48-.94-.82-1.13-.28-.15-.68-.52-.01-.53.63-.01 1.08.58 1.23.82.72 1.21 1.87.87 2.33.66.07-.52.28-.87.51-1.07-1.78-.2-3.64-.89-3.64-3.95 0-.87.31-1.59.82-2.15-.08-.2-.36-1.02.08-2.12 0 0 .67-.21 2.2.82.64-.18 1.32-.27 2-.27.68 0 1.36.09 2 .27 1.53-1.04 2.2-.82 2.2-.82.44 1.1.16 1.92.08 2.12.51.56.82 1.27.82 2.15 0 3.07-1.87 3.75-3.65 3.95.29.25.54.73.54 1.48 0 1.07-.01 1.93-.01 2.2 0 .21.15.46.55.38A8.013 8.013 0 0 0 16 8c0-4.42-3.58-8-8-8z"/></svg> -</a> - <ul class="list-style-none d-flex flex-wrap "> - <li class="mr-3"><a data-ga-click="Footer, go to contact, text:contact" href="https://github.com/contact">Contact GitHub</a></li> - <li class="mr-3"><a href="https://github.com/pricing" data-ga-click="Footer, go to Pricing, text:Pricing">Pricing</a></li> - <li class="mr-3"><a href="https://developer.github.com" data-ga-click="Footer, go to api, text:api">API</a></li> - <li class="mr-3"><a href="https://training.github.com" data-ga-click="Footer, go to training, text:training">Training</a></li> - <li class="mr-3"><a href="https://github.blog" data-ga-click="Footer, go to blog, text:blog">Blog</a></li> - <li><a data-ga-click="Footer, go to about, text:about" href="https://github.com/about">About</a></li> - - </ul> - </div> - <div class="d-flex flex-justify-center pb-6"> - <span class="f6 text-gray-light"></span> - </div> -</div> - - - - <div id="ajax-error-message" class="ajax-error-message flash flash-error"> - <svg class="octicon octicon-alert" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8.893 1.5c-.183-.31-.52-.5-.887-.5s-.703.19-.886.5L.138 13.499a.98.98 0 0 0 0 1.001c.193.31.53.501.886.501h13.964c.367 0 .704-.19.877-.5a1.03 1.03 0 0 0 .01-1.002L8.893 1.5zm.133 11.497H6.987v-2.003h2.039v2.003zm0-3.004H6.987V5.987h2.039v4.006z"/></svg> - <button type="button" class="flash-close js-ajax-error-dismiss" aria-label="Dismiss error"> - <svg class="octicon octicon-x" viewBox="0 0 12 16" version="1.1" width="12" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M7.48 8l3.75 3.75-1.48 1.48L6 9.48l-3.75 3.75-1.48-1.48L4.52 8 .77 4.25l1.48-1.48L6 6.52l3.75-3.75 1.48 1.48L7.48 8z"/></svg> - </button> - You can’t perform that action at this time. - </div> - - - <script crossorigin="anonymous" integrity="sha512-EPrD+nddbyhpiLL8l3M8VfJpZr4J2EWQLaPXZ+6A3VDJKzS5HeZ3dkMVieHSdvIPHsMbWPyVlY42SWKoS4XTfA==" type="application/javascript" src="https://github.githubassets.com/assets/compat-bootstrap-831f12d4.js"></script> - <script crossorigin="anonymous" integrity="sha512-P6rRiDq0lrIYgYfVPJ4Is2goJODXsywx7ozNssJbEOAwc5cBChqaUFZ+puemlu3KAI/q5XfkOBaSNjXExBE3ag==" type="application/javascript" src="https://github.githubassets.com/assets/frameworks-15d12409.js"></script> - - <script crossorigin="anonymous" async="async" integrity="sha512-sD5UHbq6I3rl+U+HEPeL+7sTZmew8P0O2uOtuHlXNJjtex4uLuwjFRTEKF/F1KbqXw52uf1B2lIwVE5ZNUqxqg==" type="application/javascript" src="https://github.githubassets.com/assets/github-bootstrap-857b0672.js"></script> - - - - <div class="js-stale-session-flash stale-session-flash flash flash-warn flash-banner" hidden - > - <svg class="octicon octicon-alert" viewBox="0 0 16 16" version="1.1" width="16" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M8.893 1.5c-.183-.31-.52-.5-.887-.5s-.703.19-.886.5L.138 13.499a.98.98 0 0 0 0 1.001c.193.31.53.501.886.501h13.964c.367 0 .704-.19.877-.5a1.03 1.03 0 0 0 .01-1.002L8.893 1.5zm.133 11.497H6.987v-2.003h2.039v2.003zm0-3.004H6.987V5.987h2.039v4.006z"/></svg> - <span class="signed-in-tab-flash">You signed in with another tab or window. <a href="">Reload</a> to refresh your session.</span> - <span class="signed-out-tab-flash">You signed out in another tab or window. <a href="">Reload</a> to refresh your session.</span> - </div> - <template id="site-details-dialog"> - <details class="details-reset details-overlay details-overlay-dark lh-default text-gray-dark hx_rsm" open> - <summary role="button" aria-label="Close dialog"></summary> - <details-dialog class="Box Box--overlay d-flex flex-column anim-fade-in fast hx_rsm-dialog hx_rsm-modal"> - <button class="Box-btn-octicon m-0 btn-octicon position-absolute right-0 top-0" type="button" aria-label="Close dialog" data-close-dialog> - <svg class="octicon octicon-x" viewBox="0 0 12 16" version="1.1" width="12" height="16" aria-hidden="true"><path fill-rule="evenodd" d="M7.48 8l3.75 3.75-1.48 1.48L6 9.48l-3.75 3.75-1.48-1.48L4.52 8 .77 4.25l1.48-1.48L6 6.52l3.75-3.75 1.48 1.48L7.48 8z"/></svg> - </button> - <div class="octocat-spinner my-6 js-details-dialog-spinner"></div> - </details-dialog> - </details> -</template> - - <div class="Popover js-hovercard-content position-absolute" style="display: none; outline: none;" tabindex="0"> - <div class="Popover-message Popover-message--bottom-left Popover-message--large Box box-shadow-large" style="width:360px;"> - </div> -</div> - - <div aria-live="polite" class="js-global-screen-reader-notice sr-only"></div> - - </body> -</html> -