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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="ucsc_user_apps" version="1.0.0">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url">http://hgdownload.soe.ucsc.edu/admin/exe/userApps.src.tgz</action>
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7 <action type="shell_command">sed 's/export USE_SSL 1/export USE_SSL 0/g' Makefile > Makefiletmp</action>
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8 <action type="shell_command">mv Makefiletmp Makefile</action>
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9 <action type="shell_command">make</action>
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10 <action type="move_directory_files">
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11 <source_directory>./bin</source_directory>
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12 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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13 </action>
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14 <action type="set_environment">
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15 <environment_variable name="UCSCUSERAPPS" action="set_to">$INSTALL_DIR</environment_variable>
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16 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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17 </action>
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18 </actions>
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19 </install>
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20 <readme>
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21 UCSC User Apps may take a moment for installation as it builds all utililities.
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22 Post installation, all tools will be available as command line executables.
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23 </readme>
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24 </package>
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25 </tool_dependency>
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