|
8
|
1
|
|
|
2 <!--This is a configuration file for the integration of a CADDSuite tool into Galaxy (http://usegalaxy.org). This file was automatically generated using GalaxyConfigGenerator, so do not bother to make too many manual modifications.-->
|
|
|
3 <tool id="galaxyconfiggenerator" name="GalaxyConfigGenerator" version="1.6">
|
|
|
4 <description>generate galaxy tool-config files</description>
|
|
|
5 <command interpreter="bash"><![CDATA[../../GalaxyConfigGenerator
|
|
|
6 #if str( $i ) != '' and str( $i ) != 'None' :
|
|
|
7 -i "$i"
|
|
|
8 #end if
|
|
|
9 #if str( $o ) != '' and str( $o ) != 'None' :
|
|
|
10 -o "$o"
|
|
|
11 #end if
|
|
|
12 #if str( $ignore ) != '' and str( $ignore ) != 'None' :
|
|
|
13 -ignore "$ignore"
|
|
|
14 #end if
|
|
|
15 #if str( $s ) != '' and str( $s ) != 'None' :
|
|
|
16 -s "$s"
|
|
|
17 #end if
|
|
|
18 | tail -n 5
|
|
|
19 ]]></command>
|
|
|
20 <inputs>
|
|
|
21 <param name="i" optional="false" label="input par-file" type="data" format="data"/>
|
|
|
22 <param name="ignore" optional="true" label="Optional: tool-parameter to be ignored, i.e. those for which no galaxy config entry should be created" area="true" type="text" size="1x15"/>
|
|
|
23 </inputs>
|
|
|
24 <outputs>
|
|
|
25 <data name="o" format="xml"/>
|
|
|
26 <data name="s" format="data"/>
|
|
|
27 </outputs>
|
|
|
28 <help>This tool can be used to create galaxy tool-configuration files.
|
|
|
29 As input, please supply a parameter-file as written by '-write_par' by all of our tools.</help>
|
|
|
30 </tool> |
