comparison test-data/fastq_dump_result.fastq @ 27:8be4f23d1018

Add bam-dump and test data.
author Matt Shirley <mdshw5@gmail.com>
date Mon, 30 Mar 2015 22:40:59 -0400
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comparison
equal deleted inserted replaced
26:7d80b2b24270 27:8be4f23d1018
1 @EM7LVYS01C1LWG_Adapter/1
2 TCAG
3 +SRR000001.1 EM7LVYS01C1LWG length=4
4 =;8G
5 @EM7LVYS01C1LWG_Mate1/2
6 GGGGGAGCTTAAATTTGAAACTAGAAAAATTTTGAACAAAATAATCATAATTGTTAGCTGATGAAAAACTAGAAAAGATTTTCTGAGT
7 +SRR000001.1 EM7LVYS01C1LWG length=88
8 C91*#==<C=EA.EA/<B=(<<:=HC90'FB5&;B:<GC6(=D=<<==C=C==B<=<<<=;<<GC8.#<<9=FB4%<8EA4%87:<<8
9 @EM7LVYS01C1LWG_Linker/3
10 GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC
11 +SRR000001.1 EM7LVYS01C1LWG length=44
12 =B;C<@8>5=C?*A<&A<&<=49/2A='@;#A<&<A9C=@9B::
13 @EM7LVYS01C1LWG_Mate2/4
14 GGTATCCCGTAGTGTGCATTCATCCCTGCTCTGGATACAGTCAGCTCCCAAATTCCATAAACAACTCCTTTGTAAGTAACCTCCTTTTGACAGGGGGTACTGAGCGGGCTGGCAAGGCN
15 +SRR000001.1 EM7LVYS01C1LWG length=119
16 B:<;=C?+<<;<===<=;C<==<FB0=<=<<<D=9=;;=<=<=<;=FB2FB2C<C<;=FB0<C==;C<D@-<=B:<=C=C;<C=GD7*=;:=HD90'==<<=<=:FB0<<C<;C=C=<!
17 @EM7LVYS01B2EMP_Adapter/1
18 TCAG
19 +SRR000001.2 EM7LVYS01B2EMP length=4
20 =<8F
21 @EM7LVYS01B2EMP_Mate1/2
22 GGGGGGGTTACACGTGCAGATTTGTTACACGGGTGTACTGTGAGGTTTGGGGTACGAATGATCCCGTTACCTAGATAGTGAGCATGGAACCC
23 +SRR000001.2 EM7LVYS01B2EMP length=92
24 @71-*&#D=<=<=<===<<:FB1=C=;<=<FA/==<<=<===<D=FB0FB4%<<=<B;=;;;FB2=D=<C<=;=<;<==<==<:;D=C=FB1
25 @EM7LVYS01B2EMP_Linker/3
26 GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC
27 +SRR000001.2 EM7LVYS01B2EMP length=44
28 <C<>6=4>5:@<%@;$@<%=<3;1:D@,D@-A='=C=D=B:C<7
29 @EM7LVYS01B2EMP_Mate2/4
30 AATGTGCAGGGCTCAGGTCAGCATTAGGGTCAGGTTCTTAGGAAAAGAAAGAGCAAAAACAATGAAACACAATACAAAGTAAAGAACACTGAGCGGGCTGGCAAGGCN
31 +SRR000001.2 EM7LVYS01B2EMP length=108
32 9.<===;;EA.<<<<C;;===<;C=<FB1<;=C=C<<C==D=GC6)<?;"<=<=HC9/%;B;==FB0<<<C<=<;FB2<;B=(8D=<:<98<;=EA/=<A9;C;>6=!
33 @EM7LVYS01C2YO0_Adapter/1
34 TCAG
35 +SRR000001.3 EM7LVYS01C2YO0 length=4
36 <==G
37 @EM7LVYS01C2YO0_Mate1/2
38 GGGGGGAGATACATCCTTTTCAAGAAGACGTAGAACATTTATTAAAATTGACCACATGCTGAGATACACCGAGAAACTCTCAAATTTGGAAGGACTGAAATCATACAAAGTACGTTTTCTTACTACAATGCAATTAAGTTGGAAATCAAATAGCAAAAATAAAATAAAAACTATTTATAT
39 +SRR000001.3 EM7LVYS01C2YO0 length=180
40 A82-)$6==8:::<B;FB5&=C==C<<<<==<<C;<<FB/:C<EA3#@8;=C;:=<<<===<;<;;=<C<<<;FB0<;<<<EA/FB/C<C=@83;<<FB07=<<<<D@,8=;<=GC6)<B:<<<=;A9<=;C;C<<3:B:C<E@-==EA.=98<HD90&=HD8+4GC8-"2;5FB19<43
41 @EM7LVYS01C2YO0_Linker/3
42 GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC
43 +SRR000001.3 EM7LVYS01C2YO0 length=44
44 9C=D=B;B<<FB1D?+FB0=C<B;<FB1FB1D@,<B<B<C<C=<
45 @EM7LVYS01C2YO0_Mate2/4
46 TTAAACTTAAAAAAATTTTTTCTAGTTATTTTATTTTGTTTGAAACAGAAATCAACTGAGCGGGCTGGCAAGGCNNNNN
47 +SRR000001.3 EM7LVYS01C2YO0 length=79
48 C=FB1<C<GB82-(#GB92,';(5:9.=FB4%8GC8,:FB0<D?+=<5?;"7:=46868;8D?+:<@8=D==59!!!!!
49 @EM7LVYS01CD8YZ_Adapter/1
50 TCAG
51 +SRR000001.4 EM7LVYS01CD8YZ length=4
52 =<:<
53 @EM7LVYS01CD8YZ_Mate1/2
54 ATCATTACAGACGGAACAGAAATAACTCAGGCAAGCCAGCTGCAACGAGAGGCAGGGCCCAGCGACAGCGCCTGGGTGGGCCTGG
55 +SRR000001.4 EM7LVYS01CD8YZ length=85
56 <<<=C=<=<<<=C;?6=<<FB2<B;;<<=A9=?7<B:<<=<<<>6=<=<=A:<=C?*C?*=;=<<<<<==C<<B=(;EA2A9<D@
57 @EM7LVYS01CD8YZ_Linker/3
58 GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC
59 +SRR000001.4 EM7LVYS01CD8YZ length=44
60 ,C<@8;2?6<A<&B=(C?+=>6A:8C?+@;$C?*=D=C=B:@8B
61 @EM7LVYS01CD8YZ_Mate2/4
62 CAGGAGGTCGAGGTTGCAGTGAGCCAAATCATGCTACTGTACAGTCTGGGTGACAGAGTGAGACCCTGTCTGAGCGGGCTGGCAAGGCN
63 +SRR000001.4 EM7LVYS01CD8YZ length=89
64 :=C==>6;=<<A9?7==;=<=<;B;EA2==<<=<=<<8:<=<7;==8D@,<<=<;<<==<=<<E@-=;7<<<<7;C?*6<C<<C<C<<!
65 @EM7LVYS01CB53W_Adapter/1
66 TCAG
67 +SRR000001.5 EM7LVYS01CB53W length=4
68 <=<H
69 @EM7LVYS01CB53W_Mate1/2
70 GGGGGCG
71 +SRR000001.5 EM7LVYS01CB53W length=7
72 C92+%8B
73 @EM7LVYS01CB53W_Linker/3
74 GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC
75 +SRR000001.5 EM7LVYS01CB53W length=44
76 :?7A9@7>6=D@-EA.C?*<A9?66D@,B>)B=(<@8D=C=>5=
77 @EM7LVYS01CB53W_Mate2/4
78 AGCCTCAAGGGCCAAAGAATGGTGTTCTCAAACTGCCATGCCACAGGACAAACTGAGCTCGCTGAGGGGACAGGAGAAGAAACGTGGGGCCATGAGGTCTCCTGAGCGGGCTGGCAAGGC
79 +SRR000001.5 EM7LVYS01CB53W length=120
80 <<A9<<B;EA.C<C>*;C=;C<=9A::<:FB0<<=B;=<;C<<;;D=8<FB0<=<=<<=8;;=:=HD8,=<<A<:<A9;FB0<:=GC6(B;;:<=D=9=<C<=:=3=EA.==D=<@7C;: