diff test-data/fastq_dump_result.fastq @ 27:8be4f23d1018

Add bam-dump and test data.
author Matt Shirley <mdshw5@gmail.com>
date Mon, 30 Mar 2015 22:40:59 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/fastq_dump_result.fastq	Mon Mar 30 22:40:59 2015 -0400
@@ -0,0 +1,80 @@
+@EM7LVYS01C1LWG_Adapter/1
+TCAG
++SRR000001.1 EM7LVYS01C1LWG length=4
+=;8G
+@EM7LVYS01C1LWG_Mate1/2
+GGGGGAGCTTAAATTTGAAACTAGAAAAATTTTGAACAAAATAATCATAATTGTTAGCTGATGAAAAACTAGAAAAGATTTTCTGAGT
++SRR000001.1 EM7LVYS01C1LWG length=88
+C91*#==<C=EA.EA/<B=(<<:=HC90'FB5&;B:<GC6(=D=<<==C=C==B<=<<<=;<<GC8.#<<9=FB4%<8EA4%87:<<8
+@EM7LVYS01C1LWG_Linker/3
+GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC
++SRR000001.1 EM7LVYS01C1LWG length=44
+=B;C<@8>5=C?*A<&A<&<=49/2A='@;#A<&<A9C=@9B::
+@EM7LVYS01C1LWG_Mate2/4
+GGTATCCCGTAGTGTGCATTCATCCCTGCTCTGGATACAGTCAGCTCCCAAATTCCATAAACAACTCCTTTGTAAGTAACCTCCTTTTGACAGGGGGTACTGAGCGGGCTGGCAAGGCN
++SRR000001.1 EM7LVYS01C1LWG length=119
+B:<;=C?+<<;<===<=;C<==<FB0=<=<<<D=9=;;=<=<=<;=FB2FB2C<C<;=FB0<C==;C<D@-<=B:<=C=C;<C=GD7*=;:=HD90'==<<=<=:FB0<<C<;C=C=<!
+@EM7LVYS01B2EMP_Adapter/1
+TCAG
++SRR000001.2 EM7LVYS01B2EMP length=4
+=<8F
+@EM7LVYS01B2EMP_Mate1/2
+GGGGGGGTTACACGTGCAGATTTGTTACACGGGTGTACTGTGAGGTTTGGGGTACGAATGATCCCGTTACCTAGATAGTGAGCATGGAACCC
++SRR000001.2 EM7LVYS01B2EMP length=92
+@71-*&#D=<=<=<===<<:FB1=C=;<=<FA/==<<=<===<D=FB0FB4%<<=<B;=;;;FB2=D=<C<=;=<;<==<==<:;D=C=FB1
+@EM7LVYS01B2EMP_Linker/3
+GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC
++SRR000001.2 EM7LVYS01B2EMP length=44
+<C<>6=4>5:@<%@;$@<%=<3;1:D@,D@-A='=C=D=B:C<7
+@EM7LVYS01B2EMP_Mate2/4
+AATGTGCAGGGCTCAGGTCAGCATTAGGGTCAGGTTCTTAGGAAAAGAAAGAGCAAAAACAATGAAACACAATACAAAGTAAAGAACACTGAGCGGGCTGGCAAGGCN
++SRR000001.2 EM7LVYS01B2EMP length=108
+9.<===;;EA.<<<<C;;===<;C=<FB1<;=C=C<<C==D=GC6)<?;"<=<=HC9/%;B;==FB0<<<C<=<;FB2<;B=(8D=<:<98<;=EA/=<A9;C;>6=!
+@EM7LVYS01C2YO0_Adapter/1
+TCAG
++SRR000001.3 EM7LVYS01C2YO0 length=4
+<==G
+@EM7LVYS01C2YO0_Mate1/2
+GGGGGGAGATACATCCTTTTCAAGAAGACGTAGAACATTTATTAAAATTGACCACATGCTGAGATACACCGAGAAACTCTCAAATTTGGAAGGACTGAAATCATACAAAGTACGTTTTCTTACTACAATGCAATTAAGTTGGAAATCAAATAGCAAAAATAAAATAAAAACTATTTATAT
++SRR000001.3 EM7LVYS01C2YO0 length=180
+A82-)$6==8:::<B;FB5&=C==C<<<<==<<C;<<FB/:C<EA3#@8;=C;:=<<<===<;<;;=<C<<<;FB0<;<<<EA/FB/C<C=@83;<<FB07=<<<<D@,8=;<=GC6)<B:<<<=;A9<=;C;C<<3:B:C<E@-==EA.=98<HD90&=HD8+4GC8-"2;5FB19<43
+@EM7LVYS01C2YO0_Linker/3
+GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC
++SRR000001.3 EM7LVYS01C2YO0 length=44
+9C=D=B;B<<FB1D?+FB0=C<B;<FB1FB1D@,<B<B<C<C=<
+@EM7LVYS01C2YO0_Mate2/4
+TTAAACTTAAAAAAATTTTTTCTAGTTATTTTATTTTGTTTGAAACAGAAATCAACTGAGCGGGCTGGCAAGGCNNNNN
++SRR000001.3 EM7LVYS01C2YO0 length=79
+C=FB1<C<GB82-(#GB92,';(5:9.=FB4%8GC8,:FB0<D?+=<5?;"7:=46868;8D?+:<@8=D==59!!!!!
+@EM7LVYS01CD8YZ_Adapter/1
+TCAG
++SRR000001.4 EM7LVYS01CD8YZ length=4
+=<:<
+@EM7LVYS01CD8YZ_Mate1/2
+ATCATTACAGACGGAACAGAAATAACTCAGGCAAGCCAGCTGCAACGAGAGGCAGGGCCCAGCGACAGCGCCTGGGTGGGCCTGG
++SRR000001.4 EM7LVYS01CD8YZ length=85
+<<<=C=<=<<<=C;?6=<<FB2<B;;<<=A9=?7<B:<<=<<<>6=<=<=A:<=C?*C?*=;=<<<<<==C<<B=(;EA2A9<D@
+@EM7LVYS01CD8YZ_Linker/3
+GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC
++SRR000001.4 EM7LVYS01CD8YZ length=44
+,C<@8;2?6<A<&B=(C?+=>6A:8C?+@;$C?*=D=C=B:@8B
+@EM7LVYS01CD8YZ_Mate2/4
+CAGGAGGTCGAGGTTGCAGTGAGCCAAATCATGCTACTGTACAGTCTGGGTGACAGAGTGAGACCCTGTCTGAGCGGGCTGGCAAGGCN
++SRR000001.4 EM7LVYS01CD8YZ length=89
+:=C==>6;=<<A9?7==;=<=<;B;EA2==<<=<=<<8:<=<7;==8D@,<<=<;<<==<=<<E@-=;7<<<<7;C?*6<C<<C<C<<!
+@EM7LVYS01CB53W_Adapter/1
+TCAG
++SRR000001.5 EM7LVYS01CB53W length=4
+<=<H
+@EM7LVYS01CB53W_Mate1/2
+GGGGGCG
++SRR000001.5 EM7LVYS01CB53W length=7
+C92+%8B
+@EM7LVYS01CB53W_Linker/3
+GTTGGAACCGAAAGGGTTTGAATTCAAACCCTTTCGGTTCCAAC
++SRR000001.5 EM7LVYS01CB53W length=44
+:?7A9@7>6=D@-EA.C?*<A9?66D@,B>)B=(<@8D=C=>5=
+@EM7LVYS01CB53W_Mate2/4
+AGCCTCAAGGGCCAAAGAATGGTGTTCTCAAACTGCCATGCCACAGGACAAACTGAGCTCGCTGAGGGGACAGGAGAAGAAACGTGGGGCCATGAGGTCTCCTGAGCGGGCTGGCAAGGC
++SRR000001.5 EM7LVYS01CB53W length=120
+<<A9<<B;EA.C<C>*;C=;C<=9A::<:FB0<<=B;=<;C<<;;D=8<FB0<=<=<<=8;;=:=HD8,=<<A<:<A9;FB0<:=GC6(B;;:<=D=9=<C<=:=3=EA.==D=<@7C;: