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1 <tool id="MergeFile4x" name="MergeFile4x" version="0.01">
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2 <description>Merge splitted file</description>
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3 <command interpreter="perl">
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4 MergeFile4x.pl $input_file1 $input_file2 $input_file3 $input_file4 > $output_file
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5 </command>
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6 <inputs>
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7 <param name="out_format" type="select" label="Format">
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8 <option value="pileup">pileup</option>
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9 <option value="fastq">fastq</option>
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10 <option value="fastqsanger">fastqsanger</option>
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11 <option value="sam">sam</option>
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12 <option value="fasta">fasta</option>
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13 </param>
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14 <param name="input_file1" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 1st file from your history"/>
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15 <param name="input_file2" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 2nd file from your history"/>
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16 <param name="input_file3" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 3rd file from your history"/>
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17 <param name="input_file4" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 4th file from your history"/>
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18 </inputs>
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19 <outputs>
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20 <data name="output_file" format="txt" label="MERGE on ${on_string}">
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21 <change_format>
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22 <when input="out_format" value="pileup" format="pileup" />
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23 <when input="out_format" value="fastq" format="fastq" />
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24 <when input="out_format" value="fastqsanger" format="fastqsanger" />
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25 <when input="out_format" value="sam" format="sam" />
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26 <when input="out_format" value="fasta" format="fasta" />
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27 </change_format>
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28 </data>
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29 </outputs>
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30
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31 <help>
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32
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33
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34
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35 </help>
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36 </tool>
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