Mercurial > repos > mcharles > rapsosnp
comparison rapsodyn/MergeMultiFile.xml @ 7:3f7b0788a1c4 draft
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author | mcharles |
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date | Tue, 07 Oct 2014 10:34:34 -0400 |
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6:1776b8ddd87e | 7:3f7b0788a1c4 |
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1 <tool id="MergeMultiFile" name="MergeMultiFile" version="1.00"> | |
2 <description>Merge multiple files</description> | |
3 <command interpreter="perl"> | |
4 MergeMultiFile.pl $input_files > $output_file | |
5 </command> | |
6 <inputs> | |
7 <param name="out_format" type="select" label="Format"> | |
8 <option value="pileup">pileup</option> | |
9 <option value="fastq">fastq</option> | |
10 <option value="fastqsanger">fastqsanger</option> | |
11 <option value="sam">sam</option> | |
12 <option value="fasta">fasta</option> | |
13 <option value="txt">txt</option> | |
14 </param> | |
15 <param name="input_files" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" multiple="true" label="Select suitable files from your history"/> | |
16 </inputs> | |
17 <outputs> | |
18 <data name="output_file" format="txt" label="MERGE on ${on_string}"> | |
19 <change_format> | |
20 <when input="out_format" value="pileup" format="pileup" /> | |
21 <when input="out_format" value="fastq" format="fastq" /> | |
22 <when input="out_format" value="fastqsanger" format="fastqsanger" /> | |
23 <when input="out_format" value="sam" format="sam" /> | |
24 <when input="out_format" value="fasta" format="fasta" /> | |
25 </change_format> | |
26 </data> | |
27 </outputs> | |
28 | |
29 <help> | |
30 | |
31 | |
32 | |
33 </help> | |
34 </tool> |