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comparison rapsodyn/MergeMultiFile.xml @ 7:3f7b0788a1c4 draft

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author mcharles
date Tue, 07 Oct 2014 10:34:34 -0400
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6:1776b8ddd87e 7:3f7b0788a1c4
1 <tool id="MergeMultiFile" name="MergeMultiFile" version="1.00">
2 <description>Merge multiple files</description>
3 <command interpreter="perl">
4 MergeMultiFile.pl $input_files > $output_file
5 </command>
6 <inputs>
7 <param name="out_format" type="select" label="Format">
8 <option value="pileup">pileup</option>
9 <option value="fastq">fastq</option>
10 <option value="fastqsanger">fastqsanger</option>
11 <option value="sam">sam</option>
12 <option value="fasta">fasta</option>
13 <option value="txt">txt</option>
14 </param>
15 <param name="input_files" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" multiple="true" label="Select suitable files from your history"/>
16 </inputs>
17 <outputs>
18 <data name="output_file" format="txt" label="MERGE on ${on_string}">
19 <change_format>
20 <when input="out_format" value="pileup" format="pileup" />
21 <when input="out_format" value="fastq" format="fastq" />
22 <when input="out_format" value="fastqsanger" format="fastqsanger" />
23 <when input="out_format" value="sam" format="sam" />
24 <when input="out_format" value="fasta" format="fasta" />
25 </change_format>
26 </data>
27 </outputs>
28
29 <help>
30
31
32
33 </help>
34 </tool>