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comparison rapsodyn/CreateMatrix.xml @ 14:93e6f2af1ce2 draft

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author mcharles
date Mon, 26 Jan 2015 18:10:52 -0500
parents 0a6c1cfe4dc8
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13:827da1a9a326 14:93e6f2af1ce2
1 <tool id="CreateMatrix" name="CreateMatrix" version="1.00"> 1 <tool id="CreateMatrix" name="CreateMatrix" version="1.00">
2 <description>Create Genotyping Matrix</description> 2 <description>Create Genotyping Matrix</description>
3 <command interpreter="perl"> 3 <command interpreter="perl">
4 CreateMatrix.pl -input_pileup_file $input_pileup_file -input_variant_file $input_variant_file -input_variant_unique_file $input_variant_unique_file > $output_file 4 CreateMatrix.pl -input_name $input_name -input_pileup_file $input_pileup_file -input_variant_unique_file $input_variant_unique_file > $output_file
5 </command> 5 </command>
6 <inputs> 6 <inputs>
7 <param name="input_name" size="30" type="text" label="Genotype name"/>
7 <param name="input_pileup_file" type="data" format="pileup" label="Select suitable PILEUP files from your history"/> 8 <param name="input_pileup_file" type="data" format="pileup" label="Select suitable PILEUP files from your history"/>
8 <param name="input_variant_file" type="data" format="pileup" label="Select suitable VARIANT files from your history"/>
9 <param name="input_variant_unique_file" type="data" format="pileup" label="Select suitable VARIANT UNIQUE files from your history"/> 9 <param name="input_variant_unique_file" type="data" format="pileup" label="Select suitable VARIANT UNIQUE files from your history"/>
10 10
11 </inputs> 11 </inputs>
12 <outputs> 12 <outputs>
13 <data name="output_file" format="txt" label="MATRIX on ${on_string}" /> 13 <data name="output_file" format="txt" label="MATRIX on ${on_string}" />