Mercurial > repos > metexplore > met4j

comparison tools/tool_conf.xml @ 4:ae4c301919c4 draft

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planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy commit 2af2c8a0ca9665e1117bb7810bffc105ed39c4f5
author metexplore
date Thu, 17 Nov 2022 07:57:52 +0000
parents 6bd9aad9626d
children 35c9abcd8934
comparison
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3:6bd9aad9626d 4:ae4c301919c4
9 <tool file="met4j/attributes/GetReactantsFromReactions/GetReactantsFromReactions.xml"/> 9 <tool file="met4j/attributes/GetReactantsFromReactions/GetReactantsFromReactions.xml"/>
10 <tool file="met4j/attributes/SbmlSetChargesFromFile/SbmlSetChargesFromFile.xml"/> 10 <tool file="met4j/attributes/SbmlSetChargesFromFile/SbmlSetChargesFromFile.xml"/>
11 <tool file="met4j/attributes/SbmlSetEcsFromFile/SbmlSetEcsFromFile.xml"/> 11 <tool file="met4j/attributes/SbmlSetEcsFromFile/SbmlSetEcsFromFile.xml"/>
12 <tool file="met4j/attributes/SbmlSetFormulasFromFile/SbmlSetFormulasFromFile.xml"/> 12 <tool file="met4j/attributes/SbmlSetFormulasFromFile/SbmlSetFormulasFromFile.xml"/>
13 <tool file="met4j/attributes/SbmlSetGprsFromFile/SbmlSetGprsFromFile.xml"/> 13 <tool file="met4j/attributes/SbmlSetGprsFromFile/SbmlSetGprsFromFile.xml"/>
14 <tool file="met4j/attributes/SbmlSetIdsFromFile/SbmlSetIdsFromFile.xml"/>
14 <tool file="met4j/attributes/SbmlSetNamesFromFile/SbmlSetNamesFromFile.xml"/> 15 <tool file="met4j/attributes/SbmlSetNamesFromFile/SbmlSetNamesFromFile.xml"/>
15 <tool file="met4j/attributes/SbmlSetPathwaysFromFile/SbmlSetPathwaysFromFile.xml"/> 16 <tool file="met4j/attributes/SbmlSetPathwaysFromFile/SbmlSetPathwaysFromFile.xml"/>
16 <tool file="met4j/attributes/SbmlSetRefsFromFile/SbmlSetRefsFromFile.xml"/> 17 <tool file="met4j/attributes/SbmlSetRefsFromFile/SbmlSetRefsFromFile.xml"/>
17 <tool file="met4j/attributes/SbmlToMetaboliteTable/SbmlToMetaboliteTable.xml"/> 18 <tool file="met4j/attributes/SbmlToMetaboliteTable/SbmlToMetaboliteTable.xml"/>
18 <section id="met4j_bigg" name="Met4J - bigg"/> 19 <section id="met4j_bigg" name="Met4J - bigg"/>
23 <tool file="met4j/convert/Sbml2Graph/Sbml2Graph.xml"/> 24 <tool file="met4j/convert/Sbml2Graph/Sbml2Graph.xml"/>
24 <tool file="met4j/convert/Sbml2Tab/Sbml2Tab.xml"/> 25 <tool file="met4j/convert/Sbml2Tab/Sbml2Tab.xml"/>
25 <tool file="met4j/convert/Tab2Sbml/Tab2Sbml.xml"/> 26 <tool file="met4j/convert/Tab2Sbml/Tab2Sbml.xml"/>
26 <section id="met4j_networkanalysis" name="Met4J - networkAnalysis"/> 27 <section id="met4j_networkanalysis" name="Met4J - networkAnalysis"/>
27 <tool file="met4j/networkAnalysis/CarbonSkeletonNet/CarbonSkeletonNet.xml"/> 28 <tool file="met4j/networkAnalysis/CarbonSkeletonNet/CarbonSkeletonNet.xml"/>
29 <tool file="met4j/networkAnalysis/ChemSimilarityWeighting/ChemSimilarityWeighting.xml"/>
28 <tool file="met4j/networkAnalysis/ChokePoint/ChokePoint.xml"/> 30 <tool file="met4j/networkAnalysis/ChokePoint/ChokePoint.xml"/>
29 <tool file="met4j/networkAnalysis/CompoundNet/CompoundNet.xml"/> 31 <tool file="met4j/networkAnalysis/CompoundNet/CompoundNet.xml"/>
32 <tool file="met4j/networkAnalysis/DegreeWeighting/DegreeWeighting.xml"/>
30 <tool file="met4j/networkAnalysis/DistanceMatrix/DistanceMatrix.xml"/> 33 <tool file="met4j/networkAnalysis/DistanceMatrix/DistanceMatrix.xml"/>
31 <tool file="met4j/networkAnalysis/ExtractSubBipNetwork/ExtractSubBipNetwork.xml"/> 34 <tool file="met4j/networkAnalysis/ExtractSubBipNetwork/ExtractSubBipNetwork.xml"/>
32 <tool file="met4j/networkAnalysis/ExtractSubNetwork/ExtractSubNetwork.xml"/> 35 <tool file="met4j/networkAnalysis/ExtractSubNetwork/ExtractSubNetwork.xml"/>
33 <tool file="met4j/networkAnalysis/ExtractSubReactionNetwork/ExtractSubReactionNetwork.xml"/> 36 <tool file="met4j/networkAnalysis/ExtractSubReactionNetwork/ExtractSubReactionNetwork.xml"/>
34 <tool file="met4j/networkAnalysis/LoadPoint/LoadPoint.xml"/> 37 <tool file="met4j/networkAnalysis/LoadPoint/LoadPoint.xml"/>
35 <tool file="met4j/networkAnalysis/MetaboRank/MetaboRank.xml"/> 38 <tool file="met4j/networkAnalysis/MetaboRank/MetaboRank.xml"/>
36 <tool file="met4j/networkAnalysis/NetworkSummary/NetworkSummary.xml"/> 39 <tool file="met4j/networkAnalysis/NetworkSummary/NetworkSummary.xml"/>
37 <tool file="met4j/networkAnalysis/PrecursorNetwork/PrecursorNetwork.xml"/> 40 <tool file="met4j/networkAnalysis/PrecursorNetwork/PrecursorNetwork.xml"/>
38 <tool file="met4j/networkAnalysis/ScopeNetwork/ScopeNetwork.xml"/> 41 <tool file="met4j/networkAnalysis/ScopeNetwork/ScopeNetwork.xml"/>
42 <tool file="met4j/networkAnalysis/SeedsAndTargets/SeedsAndTargets.xml"/>
39 <tool file="met4j/networkAnalysis/SideCompoundsScan/SideCompoundsScan.xml"/> 43 <tool file="met4j/networkAnalysis/SideCompoundsScan/SideCompoundsScan.xml"/>
40 </toolbox> 44 </toolbox>