diff tools/convert/Kegg2Sbml/Kegg2Sbml.xml @ 1:9b162ee6ff8e draft

planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy commit 12798951d21c3b2b13514b38148b2848cb422c95
author metexplore
date Mon, 27 Jun 2022 13:41:08 +0000
parents dcd16521b969
children e69a78624877
line wrap: on
line diff
--- a/tools/convert/Kegg2Sbml/Kegg2Sbml.xml	Fri Jun 10 10:31:34 2022 +0000
+++ b/tools/convert/Kegg2Sbml/Kegg2Sbml.xml	Mon Jun 27 13:41:08 2022 +0000
@@ -1,11 +1,11 @@
 <?xml version="1.0" encoding="UTF-8"?>
-<tool id="met4j_Kegg2Sbml" name="Kegg2Sbml" version="0.11.0">
+<tool id="met4j_Kegg2Sbml" name="Kegg2Sbml" version="0.12.0">
   <description>Build a SBML file from KEGG organism-specific pathways. Uses Kegg API.</description>
   <xrefs>
     <xref type="bio.tools">met4j</xref>
   </xrefs>
   <requirements>
-    <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:0.11.0</container>
+    <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:0.12.0</container>
   </requirements>
   <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh convert.Kegg2Sbml#if str($org):
  -org "$org"
@@ -22,17 +22,8 @@
   <outputs>
     <data format="sbml" name="sbml"/>
   </outputs>
-  <tests>
-    <!-- <test maxseconds="600">
-      <param name="org" value="buc"/>
-      <output ftype="sbml" name="sbml">
-        <assert_contents>
-          <is_valid_xml/>
-
-        </assert_contents>
-      </output>
-    </test> -->
-  </tests>
+  <tests/>
   <help><![CDATA[Build a SBML file from KEGG organism-specific pathways. Uses Kegg API.
 Errors returned by this program could be due to Kegg API dysfunctions or limitations. Try later if this problem occurs.]]></help>
+  <citations/>
 </tool>