Mercurial > repos > metexplore > met4j
changeset 7:1436e9cde9c9 draft
planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy commit 1d31a48bf8328b7a3ad9910971d24b9f453459c5
line wrap: on
line diff
--- a/HowTo.md Wed May 17 13:26:37 2023 +0000 +++ b/HowTo.md Tue Jul 04 10:21:26 2023 +0000 @@ -94,7 +94,17 @@ When tests are ok, you can create a new met4j release. The CI will create a new Singularity image corresponding to this version. -Create a new met4j-galaxy release with the same version number as met4j. After push, the CI will test again the apps. If it's ok, a new version of met4j-galaxy will be pushed on the galaxy toolshed. The instance in usegalaxy.fr will be updated the next monday. +Create a new met4j-galaxy release with the same version number as met4j. + +After testing this new version, you have to do: + +```bash +git push origin 1.3.0 +``` + +Modify the 1.3.0 by the version number that you want to push. + +After push, the CI will test again the apps. If it's ok, a new version of met4j-galaxy will be pushed on the galaxy toolshed. The instance in usegalaxy.fr will be updated the next monday. ## Update met4j-galaxy-runner
--- a/build/tools/BipartiteDistanceMatrix/BipartiteDistanceMatrix.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/BipartiteDistanceMatrix/BipartiteDistanceMatrix.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_BipartiteDistanceMatrix" name="BipartiteDistanceMatrix" version="1.3.0"> +<tool id="met4j_BipartiteDistanceMatrix" name="BipartiteDistanceMatrix" version="1.4.0"> <description>Create a compound to reactions distance matrix.</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.BipartiteDistanceMatrix -i "$inputPath" #if str($sideCompoundFile) != 'None':
--- a/build/tools/CarbonSkeletonNet/CarbonSkeletonNet.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/CarbonSkeletonNet/CarbonSkeletonNet.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_CarbonSkeletonNet" name="CarbonSkeletonNet" version="1.3.0"> +<tool id="met4j_CarbonSkeletonNet" name="CarbonSkeletonNet" version="1.4.0"> <description>Create a carbon skeleton graph representation of a SBML file content, using GSAM atom-mapping file (see https://forgemia.inra.fr/metexplore/gsam)</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "$inputPath" -g "$inputAAM"
--- a/build/tools/ChemSimilarityWeighting/ChemSimilarityWeighting.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/ChemSimilarityWeighting/ChemSimilarityWeighting.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_ChemSimilarityWeighting" name="ChemSimilarityWeighting" version="1.3.0"> +<tool id="met4j_ChemSimilarityWeighting" name="ChemSimilarityWeighting" version="1.4.0"> <description>Provides tabulated compound graph edge list, with one column with reactant pair's chemical similarity.</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.ChemSimilarityWeighting#if str($type): -f "$type"
--- a/build/tools/ChokePoint/ChokePoint.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/ChokePoint/ChokePoint.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,21 +1,17 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_ChokePoint" name="ChokePoint" version="1.3.0"> +<tool id="met4j_ChokePoint" name="ChokePoint" version="1.4.0"> <description>Compute the Choke points of a metabolic network.</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.ChokePoint -i "$inputPath" -#if str($sideCompoundFile) != 'None': - -s "$sideCompoundFile" -#end if -o "$outputPath" ]]></command> <inputs> <param argument="-i" format="sbml" label="input SBML file" name="inputPath" optional="false" type="data" value=""/> - <param argument="-s" format="txt" label="an optional file containing list of side compounds to ignore" name="sideCompoundFile" optional="true" type="data" value=""/> </inputs> <outputs> <data format="tsv" name="outputPath"/> @@ -25,28 +21,16 @@ <param name="inputPath" value="XF_network.sbml"/> <output ftype="tsv" name="outputPath"> <assert_contents> - <has_n_lines n="202"/> + <has_n_lines n="695"/> <has_n_columns n="3"/> <has_line_matching expression="R_ADEtex.*adenine_transport_via_diffusion__extracellular_to_periplasm_.*M_ade_e <==> M_ade_p" n="1"/> - <has_line_matching expression="R_X5PL3E.*R_X5PL3E.*M_xu5p_L_c --> M_ru5p_L_c" n="1"/> - </assert_contents> - </output> - </test> - <test> - <param name="inputPath" value="XF_network.sbml"/> - <param name="sideCompoundFile" value="sides.txt"/> - <output ftype="tsv" name="outputPath"> - <assert_contents> - <has_n_lines n="200"/> - <has_n_columns n="3"/> - <has_line_matching expression="R_ADEtex.*adenine_transport_via_diffusion__extracellular_to_periplasm_.*M_ade_e <==> M_ade_p" n="1" negate="true"/> - <has_line_matching expression="R_X5PL3E.*R_X5PL3E.*M_xu5p_L_c --> M_ru5p_L_c" n="1" negate="true"/> + <has_line_matching expression="R_AGDC_r.*R_AGDC_r.*M_acgam6p_c \+ M_h2o_c --> M_ac_c \+ M_gam6p_c" n="1"/> </assert_contents> </output> </test> </tests> <help><![CDATA[Compute the Choke points of a metabolic network. -Load points constitute an indicator of lethality and can help identifying drug target Choke points are reactions that are required to consume or produce one compound. Targeting of choke point can lead to the accumulation or the loss of some metabolites, thus choke points constitute an indicator of lethality and can help identifying drug target +Choke points constitute an indicator of lethality and can help identifying drug target Choke points are reactions that are required to consume or produce one compound. Targeting of choke point can lead to the accumulation or the loss of some metabolites, thus choke points constitute an indicator of lethality and can help identifying drug target See : Syed Asad Rahman, Dietmar Schomburg; Observing local and global properties of metabolic pathways: ‘load points’ and ‘choke points’ in the metabolic networks. Bioinformatics 2006; 22 (14): 1767-1774. doi: 10.1093/bioinformatics/btl181]]></help> <citations/> </tool>
--- a/build/tools/ChokePoint/test-data/sides.txt Wed May 17 13:26:37 2023 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,4 +0,0 @@ -M_xu5p_L_c -M_ru5p_L_c -M_ade_e -M_ade_p \ No newline at end of file
--- a/build/tools/CompoundNet/CompoundNet.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/CompoundNet/CompoundNet.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_CompoundNet" name="CompoundNet" version="1.3.0"> +<tool id="met4j_CompoundNet" name="CompoundNet" version="1.4.0"> <description>Advanced creation of a compound graph representation of a SBML file content</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><O)NC</p> - </body> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" - xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#A_ext"> - <bqbiol:is> - <in:inchi xmlns:in="https://biomodels.net/inchi">InChI=1S/C2H6O/c1-2-3/h3H,2H2,1H3</in:inchi> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - - </species> - <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="A" name="A"/> - <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="B" name="B"/> - <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="C" name="C"/> - <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="D" name="D"/> - <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="D_ext" name="D_ext"/> - <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="E_ext" name="E_ext"/> - <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="E" name="E"/> - </listOfSpecies> - <listOfParameters> - <parameter constant="true" id="cobra_default_lb" name="cobra default - lb" sboTerm="SBO:0000626" units="mmol_per_gDW_per_hr" value="-100000.0"/> - <parameter constant="true" id="cobra_default_ub" name="cobra default - ub" sboTerm="SBO:0000626" units="mmol_per_gDW_per_hr" value="100000.0"/> - <parameter constant="true" id="cobra_0_bound" name="cobra 0 - bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="0.0"/> - <parameter constant="true" id="reac1_upper_bound" name="reac1 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="10.0"/> - <parameter constant="true" id="reac6_upper_bound" name="reac6 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="3.0"/> - <parameter constant="true" id="reac2_upper_bound" name="reac2 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="100000.0"/> - <parameter constant="true" id="reac3_upper_bound" name="reac3 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="100000.0"/> - <parameter constant="true" id="reac4_upper_bound" name="reac4 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="100000.0"/> - <parameter constant="true" id="reac5_upper_bound" name="reac5 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="100000.0"/> - <parameter constant="true" id="reac7_upper_bound" name="reac7 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="100000.0"/> - </listOfParameters> - <listOfReactions> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac1_upper_bound" id="reac1" name="reac1" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="A_ext" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="A" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="reac2_upper_bound" id="reac2" name="reac2" reversible="true"> - <listOfReactants> - <speciesReference constant="true" species="A" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="B" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac3_upper_bound" id="reac3" name="reac3" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="A" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="C" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac4_upper_bound" id="reac4" name="reac4" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="B" stoichiometry="1.0"/> - <speciesReference constant="true" species="C" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="D" stoichiometry="1.5"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac5_upper_bound" id="reac5" name="reac5" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="D" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="D_ext" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac6_upper_bound" id="reac6" name="reac6" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="E_ext" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="E" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac7_upper_bound" id="reac7" name="reac7" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="E" stoichiometry="2.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="D" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - </listOfReactions> - </model> -</sbml> \ No newline at end of file
--- a/build/tools/MetaboRank/test-data/weights.txt Wed May 17 13:26:37 2023 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,2 +0,0 @@ -B 10 -C 1 \ No newline at end of file
--- a/build/tools/NameMatcher/NameMatcher.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/NameMatcher/NameMatcher.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_NameMatcher" name="NameMatcher" version="1.3.0"> +<tool id="met4j_NameMatcher" name="NameMatcher" version="1.4.0"> <description>This tool runs edit-distance based fuzzy matching to perform near-similar name matching between a metabolic model and a list of chemical names in a dataset. A harmonization processing is performed on chemical names with substitutions of common patterns among synonyms, in order to create aliases on which classical fuzzy matching can be run efficiently.</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh mapping.NameMatcher#if str($n): -nMatch "$n"
--- a/build/tools/NetworkSummary/NetworkSummary.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/NetworkSummary/NetworkSummary.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_NetworkSummary" name="NetworkSummary" version="1.3.0"> +<tool id="met4j_NetworkSummary" name="NetworkSummary" version="1.4.0"> <description>Create a report summarizing several graph measures characterising the structure of the network.</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.NetworkSummary -i "$inputPath" #if str($sideCompoundFile) != 'None':
--- a/build/tools/PathwayNet/PathwayNet.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/PathwayNet/PathwayNet.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_PathwayNet" name="PathwayNet" version="1.3.0"> +<tool id="met4j_PathwayNet" name="PathwayNet" version="1.4.0"> <description>Creation of a Pathway Network representation of a SBML file content</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.PathwayNet -s "$inputPath" #if str($inputSide) != 'None':
--- a/build/tools/PrecursorNetwork/PrecursorNetwork.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/PrecursorNetwork/PrecursorNetwork.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_PrecursorNetwork" name="PrecursorNetwork" version="1.3.0"> +<tool id="met4j_PrecursorNetwork" name="PrecursorNetwork" version="1.4.0"> <description>Perform a network expansion from a set of compound targets to create a precursor network.</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.PrecursorNetwork -i "$sbmlFilePath" -t "$targetsFilePath"
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/build/tools/SBMLwizard/SBMLwizard.xml Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,79 @@ +<?xml version="1.0" encoding="UTF-8"?> +<tool id="met4j_SBMLwizard" name="SBMLwizard" version="1.4.0"> + <description>General SBML model processing</description> + <xrefs> + <xref type="bio.tools">met4j</xref> + </xrefs> + <requirements> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> + </requirements> + <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh convert.SBMLwizard -s "$inputPath" +#if str($inputSide) != 'None': + -rc "$inputSide" +#end if + $removeIsolated +#if str($inputReactions) != 'None': + -rr "$inputReactions" +#end if + $removeNoFlux +#if str($mergingStrat): + -mc "$mergingStrat" +#end if + $removeDuplicated +#if str($exchangeCompToRemove): + -rEX "$exchangeCompToRemove" +#end if + -o "$outputPath" +]]></command> + <inputs> + <param argument="-s" format="sbml" label="input SBML file" name="inputPath" optional="false" type="data" value=""/> + <param argument="-rc" format="txt" label="file containing identifiers of compounds to remove from the metabolic network" name="inputSide" optional="true" type="data" value=""/> + <param argument="-ric" checked="false" falsevalue="" label="remove isolated compounds (not involved in any reaction)" name="removeIsolated" truevalue="-ric" type="boolean" value="false"/> + <param argument="-rr" format="txt" label="file containing identifiers of reactions to remove from the metabolic network" name="inputReactions" optional="true" type="data" value=""/> + <param argument="-r0" checked="false" falsevalue="" label="remove reactions with lower and upper flux bounds both set to 0.0" name="removeNoFlux" truevalue="-r0" type="boolean" value="false"/> + <param argument="-mc" label="merge compartments using the provided strategy. No merge by default. "by_name" can be used if names are consistent and unambiguous across compartments, "by_id" can be used if compartment suffix is present in compounds identifiers (id in form "xxx_y" with xxx as base identifier and y as compartment label)." name="mergingStrat" optional="true" type="select" value="no"> + <option selected="true" value="no">no</option> + <option value="by_name">by_name</option> + <option value="by_id">by_id</option> + </param> + <param argument="-rdr" checked="false" falsevalue="" label="remove duplicated reactions (same reactants, same GPR)" name="removeDuplicated" truevalue="-rdr" type="boolean" value="false"/> + <param argument="-rEX" label="remove exchange reactions and species from given exchange compartment identifier" name="exchangeCompToRemove" optional="true" type="text" value=""> + <sanitizer invalid_char="_"> + <valid initial="string.printable"/> + </sanitizer> + </param> + </inputs> + <outputs> + <data format="sbml" name="outputPath"/> + </outputs> + <tests> + <test> + <param name="inputPath" value="Human-GEM_pathways.xml"/> + <param name="removeIsolated" value="true"/> + <param name="removeNoFlux" value="true"/> + <param name="mergingStrat" value="by_id"/> + <param name="removeDuplicated" value="true"/> + <param name="exchangeCompToRemove" value="s"/> + <output ftype="sbml" name="outputPath"> + <assert_contents> + <has_text text="</sbml>"/> + </assert_contents> + </output> + </test> + <test> + <param name="inputPath" value="XF_network.sbml"/> + <param name="removeIsolated" value="true"/> + <param name="removeNoFlux" value="true"/> + <param name="removeDuplicated" value="true"/> + <param name="inputSide" value="XF_network_C_Side.tab"/> + <param name="inputReactions" value="XF_network_R_Seed.tab"/> + <output ftype="sbml" name="outputPath"> + <assert_contents> + <has_text text="</sbml>"/> + </assert_contents> + </output> + </test> + </tests> + <help><![CDATA[General SBML model processing including compound removal (such as side compounds or isolated compounds), reaction removal (ex. blocked or exchange reaction), and compartment merging]]></help> + <citations/> +</tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/build/tools/SBMLwizard/test-data/Human-GEM_pathways.xml Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,7661 @@ +<?xml version="1.0" encoding="UTF-8"?> +<sbml fbc:required="false" groups:required="false" level="3" version="2" xmlns="http://www.sbml.org/sbml/level3/version2/core" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1"> + <model fbc:strict="true" id="HumanGEM" metaid="HumanGEM" name="Generic genome-scale metabolic model of Homo sapiens"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Genome-scale metabolic models are valuable tools to study metabolism and provide a scaffold for the integrative analysis of omics data. This is the latest version of Human-GEM, which is a genome-scale metabolic model of a generic human cell. The objective of Human-GEM is to serve as a community model for enabling integrative and mechanistic studies of human metabolism.</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#HumanGEM"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/taxonomy/9606"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:listOfObjectives fbc:activeObjective="obj"> + <fbc:objective fbc:id="obj" fbc:type="maximize"> + <fbc:listOfFluxObjectives> + <fbc:fluxObjective fbc:coefficient="1" fbc:reaction="R_biomass_human"/> + </fbc:listOfFluxObjectives> + </fbc:objective> + </fbc:listOfObjectives> + <fbc:listOfGeneProducts> + <fbc:geneProduct fbc:id="ENSG00000023697" fbc:label="ENSG00000023697" fbc:name="ENSG00000023697" metaid="_12915ddf-e017-4a38-a80d-e9982f8ac7cc"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000023697</p> + <p>hgnc.symbol: DERA</p> + <p>ncbigene: 51071</p> + <p>uniprot: Q9Y315</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000130313" fbc:label="ENSG00000130313" fbc:name="ENSG00000130313" metaid="b7f31dab-0da6-4c9e-9c76-6ea1952d4f6b"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000130313</p> + <p>hgnc.symbol: PGLS</p> + <p>ncbigene: 25796</p> + <p>uniprot: O95336</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000157353" fbc:label="ENSG00000157353" fbc:name="ENSG00000157353" metaid="f2bfd1a8-b479-4718-bb3f-030aed87a562"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000157353</p> + <p>hgnc.symbol: FCSK</p> + <p>ncbigene: 197258</p> + <p>uniprot: Q8N0W3</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000114268" fbc:label="ENSG00000114268" fbc:name="ENSG00000114268" metaid="d1ad0711-77a6-4e33-85ba-dff0e0e56b5c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000114268</p> + <p>hgnc.symbol: PFKFB4</p> + <p>ncbigene: 5210</p> + <p>uniprot: Q16877</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000197417" fbc:label="ENSG00000197417" fbc:name="ENSG00000197417" metaid="_36aac772-72a3-44fd-97f3-84213d36d9e2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000197417</p> + <p>hgnc.symbol: SHPK</p> + <p>ncbigene: 23729</p> + <p>uniprot: Q9UHJ6</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000117411" fbc:label="ENSG00000117411" fbc:name="ENSG00000117411" metaid="_8a05124a-b1a0-492d-83cd-3aac293621f3"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000117411</p> + <p>hgnc.symbol: B4GALT2</p> + <p>ncbigene: 8704</p> + <p>uniprot: O60909</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000170525" fbc:label="ENSG00000170525" fbc:name="ENSG00000170525" metaid="_37605db9-6c99-4033-a556-016ad0da13f8"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000170525</p> + <p>hgnc.symbol: PFKFB3</p> + <p>ncbigene: 5209</p> + <p>uniprot: Q16875</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000229937" fbc:label="ENSG00000229937" fbc:name="ENSG00000229937" metaid="_58f34e8c-42a2-4a2a-8de9-714e67c5b732"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000229937</p> + <p>hgnc.symbol: PRPS1L1</p> + <p>ncbigene: 221823</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000085662" fbc:label="ENSG00000085662" fbc:name="ENSG00000085662" metaid="fb8056b5-fb1e-42ed-b1e3-0f3530b674e2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000085662</p> + <p>hgnc.symbol: AKR1B1</p> + <p>ncbigene: 231</p> + <p>uniprot: P15121</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000101911" fbc:label="ENSG00000101911" fbc:name="ENSG00000101911" metaid="b98d9eef-49ad-45d4-8889-02e296604457"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000101911</p> + <p>hgnc.symbol: PRPS2</p> + <p>ncbigene: 5634</p> + <p>uniprot: P11908</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000138030" fbc:label="ENSG00000138030" fbc:name="ENSG00000138030" metaid="a0549ed3-97c1-4eb0-9891-467f734cfd29"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000138030</p> + <p>hgnc.symbol: KHK</p> + <p>ncbigene: 3795</p> + <p>uniprot: P50053</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000167363" fbc:label="ENSG00000167363" fbc:name="ENSG00000167363" metaid="_940a3aa4-9800-407e-a89c-3c2940a0c773"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000167363</p> + <p>hgnc.symbol: FN3K</p> + <p>ncbigene: 64122</p> + <p>uniprot: Q9H479</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000160211" fbc:label="ENSG00000160211" fbc:name="ENSG00000160211" metaid="d7d059c0-a147-4808-a248-4b83244f07eb"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000160211</p> + <p>hgnc.symbol: G6PD</p> + <p>ncbigene: 2539</p> + <p>uniprot: P11413</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000090402" fbc:label="ENSG00000090402" fbc:name="ENSG00000090402" metaid="_3ac56916-54f0-4fcd-8dc5-767cbd61ff9b"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000090402</p> + <p>hgnc.symbol: SI</p> + <p>ncbigene: 6476</p> + <p>uniprot: P14410</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000163521" fbc:label="ENSG00000163521" fbc:name="ENSG00000163521" metaid="cb001f39-7403-47ab-a7f6-94ccbf288b16"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000163521</p> + <p>hgnc.symbol: GLB1L</p> + <p>ncbigene: 79411</p> + <p>uniprot: Q6UWU2</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000235376" fbc:label="ENSG00000235376" fbc:name="ENSG00000235376" metaid="fc35bd7a-90b3-4ede-927f-fd37279642dd"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000235376</p> + <p>hgnc.symbol: RPEL1</p> + <p>ncbigene: 729020</p> + <p>uniprot: Q2QD12</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000049239" fbc:label="ENSG00000049239" fbc:name="ENSG00000049239" metaid="_32ef79cb-7c0c-4511-b69b-34ab8e054773"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000049239</p> + <p>hgnc.symbol: H6PD</p> + <p>ncbigene: 9563</p> + <p>uniprot: O95479</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000102393" fbc:label="ENSG00000102393" fbc:name="ENSG00000102393" metaid="_5fc82091-e274-44d1-9963-ee5037073028"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000102393</p> + <p>hgnc.symbol: GLA</p> + <p>ncbigene: 2717</p> + <p>uniprot: P06280</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000109107" fbc:label="ENSG00000109107" fbc:name="ENSG00000109107" metaid="f8bf3621-aa7c-4b44-851a-391c43c7cbb2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000109107</p> + <p>hgnc.symbol: ALDOC</p> + <p>ncbigene: 230</p> + <p>uniprot: P09972</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000285043" fbc:label="ENSG00000285043" fbc:name="ENSG00000285043" metaid="c11eee35-7869-49f9-9544-50a998907f37"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000285043</p> + <p>hgnc.symbol: AC093512.2</p> + <p>ncbigene: 112694756</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000132746" fbc:label="ENSG00000132746" fbc:name="ENSG00000132746" metaid="_471be81a-0170-4a4f-af8d-346cd6ae65e4"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000132746</p> + <p>hgnc.symbol: ALDH3B2</p> + <p>ncbigene: 222</p> + <p>uniprot: P48448</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000141959" fbc:label="ENSG00000141959" fbc:name="ENSG00000141959" metaid="_9b6348d8-9868-49a9-8ea5-b19d1936b26e"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000141959</p> + <p>hgnc.symbol: PFKL</p> + <p>ncbigene: 5211</p> + <p>uniprot: P17858</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000108813" fbc:label="ENSG00000108813" fbc:name="ENSG00000108813" metaid="_7a5c0fbb-1847-4113-bb3b-28088fca4338"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000108813</p> + <p>hgnc.symbol: DLX4</p> + <p>ncbigene: 1748</p> + <p>uniprot: Q92988</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000144591" fbc:label="ENSG00000144591" fbc:name="ENSG00000144591" metaid="_51230f4a-d1e5-4390-9313-7228d09b99fe"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000144591</p> + <p>hgnc.symbol: GMPPA</p> + <p>ncbigene: 29926</p> + <p>uniprot: Q96IJ6</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000213930" fbc:label="ENSG00000213930" fbc:name="ENSG00000213930" metaid="_74d4cb52-23dc-49d0-adc2-7526f07863ab"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000213930</p> + <p>hgnc.symbol: GALT</p> + <p>ncbigene: 2592</p> + <p>uniprot: P07902</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000170266" fbc:label="ENSG00000170266" fbc:name="ENSG00000170266" metaid="e1de023f-00b6-4b3e-9be0-e9ae93a2c334"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000170266</p> + <p>hgnc.symbol: GLB1</p> + <p>ncbigene: 2720</p> + <p>uniprot: P16278</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000241343" fbc:label="ENSG00000241343" fbc:name="ENSG00000241343" metaid="_25cf8431-007a-45f6-b496-f624fde5f63b"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000241343</p> + <p>hgnc.symbol: RPL36A</p> + <p>ncbigene: 6173</p> + <p>uniprot: P83881</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000151005" fbc:label="ENSG00000151005" fbc:name="ENSG00000151005" metaid="_46587b13-0f5e-4416-b277-0a03f5b571eb"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000151005</p> + <p>hgnc.symbol: TKTL2</p> + <p>ncbigene: 84076</p> + <p>uniprot: Q9H0I9</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000123836" fbc:label="ENSG00000123836" fbc:name="ENSG00000123836" metaid="d5c747e3-5a3b-4577-ac04-56469d75e91c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000123836</p> + <p>hgnc.symbol: PFKFB2</p> + <p>ncbigene: 5208</p> + <p>uniprot: O60825</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000116199" fbc:label="ENSG00000116199" fbc:name="ENSG00000116199" metaid="_76a43217-c502-4f65-9a11-d073910cfd5c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000116199</p> + <p>hgnc.symbol: FAM20B</p> + <p>ncbigene: 9917</p> + <p>uniprot: O75063</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000164068" fbc:label="ENSG00000164068" fbc:name="ENSG00000164068" metaid="e4d5b9d5-59c0-4c44-9088-ad7a6080049f"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000164068</p> + <p>hgnc.symbol: RNF123</p> + <p>ncbigene: 63891</p> + <p>uniprot: Q5XPI4</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000100417" fbc:label="ENSG00000100417" fbc:name="ENSG00000100417" metaid="_26c82f2c-e9c8-4d20-9e49-8640aff44e96"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000100417</p> + <p>hgnc.symbol: PMM1</p> + <p>ncbigene: 5372</p> + <p>uniprot: Q92871</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000167531" fbc:label="ENSG00000167531" fbc:name="ENSG00000167531" metaid="_6173500e-92e9-4814-b379-bea6c79b96d6"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000167531</p> + <p>hgnc.symbol: LALBA</p> + <p>ncbigene: 3906</p> + <p>uniprot: P00709</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000149925" fbc:label="ENSG00000149925" fbc:name="ENSG00000149925" metaid="_844a3d97-d13a-4529-a1be-baa8040739b6"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000149925</p> + <p>hgnc.symbol: ALDOA</p> + <p>ncbigene: 226</p> + <p>uniprot: P04075</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000141560" fbc:label="ENSG00000141560" fbc:name="ENSG00000141560" metaid="_5a622d9f-6dee-420e-bb39-e7c40ca653b2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000141560</p> + <p>hgnc.symbol: FN3KRP</p> + <p>ncbigene: 79672</p> + <p>uniprot: Q9HA64</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000100413" fbc:label="ENSG00000100413" fbc:name="ENSG00000100413" metaid="_85b3bca0-ab21-4d12-b312-d8b2b366af39"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000100413</p> + <p>hgnc.symbol: POLR3H</p> + <p>ncbigene: 171568</p> + <p>uniprot: Q9Y535</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000007350" fbc:label="ENSG00000007350" fbc:name="ENSG00000007350" metaid="_6601c12a-ae74-4669-9b3e-db90da268d86"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000007350</p> + <p>hgnc.symbol: TKTL1</p> + <p>ncbigene: 8277</p> + <p>uniprot: P51854</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000184254" fbc:label="ENSG00000184254" fbc:name="ENSG00000184254" metaid="_1bee2946-bc61-47c3-8dbf-7b84f796515d"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000184254</p> + <p>hgnc.symbol: ALDH1A3</p> + <p>ncbigene: 220</p> + <p>uniprot: P47895</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000163931" fbc:label="ENSG00000163931" fbc:name="ENSG00000163931" metaid="dc4a1857-080d-45fc-987e-2adf5620ea3d"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000163931</p> + <p>hgnc.symbol: TKT</p> + <p>ncbigene: 7086</p> + <p>uniprot: P29401</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000147224" fbc:label="ENSG00000147224" fbc:name="ENSG00000147224" metaid="c4d0c0db-49df-4667-a605-36cd16b32f8c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000147224</p> + <p>hgnc.symbol: PRPS1</p> + <p>ncbigene: 5631</p> + <p>uniprot: P60891</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000142657" fbc:label="ENSG00000142657" fbc:name="ENSG00000142657" metaid="beabaf4f-5581-48ed-b522-8dcd497f96aa"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000142657</p> + <p>hgnc.symbol: PGD</p> + <p>ncbigene: 5226</p> + <p>uniprot: P52209</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000086062" fbc:label="ENSG00000086062" fbc:name="ENSG00000086062" metaid="_5e8317c7-1bfe-47e1-bebb-535601d5f6aa"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000086062</p> + <p>hgnc.symbol: B4GALT1</p> + <p>ncbigene: 2683</p> + <p>uniprot: P15291</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000079739" fbc:label="ENSG00000079739" fbc:name="ENSG00000079739" metaid="_224dd45b-ce2d-4b1b-9b2e-b1c2ecbd40c9"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000079739</p> + <p>hgnc.symbol: PGM1</p> + <p>ncbigene: 5236</p> + <p>uniprot: P36871</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000254685" fbc:label="ENSG00000254685" fbc:name="ENSG00000254685" metaid="e68446d0-1583-4e86-a77d-d8dc3ce4f50c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000254685</p> + <p>hgnc.symbol: FPGT</p> + <p>ncbigene: 8790</p> + <p>uniprot: O14772</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000153574" fbc:label="ENSG00000153574" fbc:name="ENSG00000153574" metaid="_3830d3c8-693c-4d4c-bb14-8c9f169e5898"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000153574</p> + <p>hgnc.symbol: RPIA</p> + <p>ncbigene: 22934</p> + <p>uniprot: P49247</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000108602" fbc:label="ENSG00000108602" fbc:name="ENSG00000108602" metaid="a488fe33-4083-4e23-a23a-76ca737cd093"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000108602</p> + <p>hgnc.symbol: ALDH3A1</p> + <p>ncbigene: 218</p> + <p>uniprot: P30838</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000214013" fbc:label="ENSG00000214013" fbc:name="ENSG00000214013" metaid="_2117f97e-9b80-42e9-a912-66e60108428e"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000214013</p> + <p>hgnc.symbol: GANC</p> + <p>ncbigene: 2595</p> + <p>uniprot: Q8TET4</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000104522" fbc:label="ENSG00000104522" fbc:name="ENSG00000104522" metaid="bc4e7c8d-cd54-48a1-b42c-0ebd38d1753c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000104522</p> + <p>hgnc.symbol: TSTA3</p> + <p>ncbigene: 7264</p> + <p>uniprot: Q13630</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000067057" fbc:label="ENSG00000067057" fbc:name="ENSG00000067057" metaid="d6009707-416e-44ba-af3c-bf5d42e5b2ae"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000067057</p> + <p>hgnc.symbol: PFKP</p> + <p>ncbigene: 5214</p> + <p>uniprot: Q01813</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000173540" fbc:label="ENSG00000173540" fbc:name="ENSG00000173540" metaid="_35aa5df1-9cdd-4670-9b8e-1070b94d1a97"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000173540</p> + <p>hgnc.symbol: GMPPB</p> + <p>ncbigene: 29925</p> + <p>uniprot: Q9Y5P6</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000162408" fbc:label="ENSG00000162408" fbc:name="ENSG00000162408" metaid="_14129ba8-0b75-4879-8b15-1391ec64be48"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000162408</p> + <p>hgnc.symbol: NOL9</p> + <p>ncbigene: 79707</p> + <p>uniprot: Q5SY16</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000159399" fbc:label="ENSG00000159399" fbc:name="ENSG00000159399" metaid="e69bc97a-c6e6-4251-b0e8-ad2336c2a6c1"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000159399</p> + <p>hgnc.symbol: HK2</p> + <p>ncbigene: 3099</p> + <p>uniprot: P52789</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000136872" fbc:label="ENSG00000136872" fbc:name="ENSG00000136872" metaid="_8b796b8b-662b-479f-a03d-8f584914568c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000136872</p> + <p>hgnc.symbol: ALDOB</p> + <p>ncbigene: 229</p> + <p>uniprot: P05062</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000197713" fbc:label="ENSG00000197713" fbc:name="ENSG00000197713" metaid="b06a020b-806e-49ce-886c-c05931b71761"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000197713</p> + <p>hgnc.symbol: RPE</p> + <p>ncbigene: 6120</p> + <p>uniprot: Q96AT9</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000115850" fbc:label="ENSG00000115850" fbc:name="ENSG00000115850" metaid="bdf0a3e9-cde6-4941-a89c-f31093c2f23c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000115850</p> + <p>hgnc.symbol: LCT</p> + <p>ncbigene: 3938</p> + <p>uniprot: P09848</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000172456" fbc:label="ENSG00000172456" fbc:name="ENSG00000172456" metaid="_43cdde20-f842-41ff-9a7c-f23706c9478f"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000172456</p> + <p>hgnc.symbol: FGGY</p> + <p>ncbigene: 55277</p> + <p>uniprot: Q96C11</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000006534" fbc:label="ENSG00000006534" fbc:name="ENSG00000006534" metaid="e9d8a15a-9726-409a-aed9-cec6b317c4e6"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000006534</p> + <p>hgnc.symbol: ALDH3B1</p> + <p>ncbigene: 221</p> + <p>uniprot: P43353</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000116783" fbc:label="ENSG00000116783" fbc:name="ENSG00000116783" metaid="_73d80bcf-dfe5-4ec8-b501-98ebfc6d6067"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000116783</p> + <p>hgnc.symbol: TNNI3K</p> + <p>ncbigene: 51086</p> + <p>uniprot: Q59H18</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000169764" fbc:label="ENSG00000169764" fbc:name="ENSG00000169764" metaid="_948d2e18-a12b-4208-aaa3-127cb64223c2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000169764</p> + <p>hgnc.symbol: UGP2</p> + <p>ncbigene: 7360</p> + <p>uniprot: Q16851</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000140263" fbc:label="ENSG00000140263" fbc:name="ENSG00000140263" metaid="a50ba3ac-966e-434e-9674-e0c5f2e25b79"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000140263</p> + <p>hgnc.symbol: SORD</p> + <p>ncbigene: 6652</p> + <p>uniprot: Q00796</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000188167" fbc:label="ENSG00000188167" fbc:name="ENSG00000188167" metaid="_2490e5dd-19aa-47d5-a66a-9f660b0085d3"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000188167</p> + <p>hgnc.symbol: TMPPE</p> + <p>ncbigene: 643853</p> + <p>uniprot: Q6ZT21</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000177156" fbc:label="ENSG00000177156" fbc:name="ENSG00000177156" metaid="a63ba87e-11e6-4a4e-868b-ce7846566b64"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000177156</p> + <p>hgnc.symbol: TALDO1</p> + <p>ncbigene: 6888</p> + <p>uniprot: P37837</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000198074" fbc:label="ENSG00000198074" fbc:name="ENSG00000198074" metaid="_809d317a-4047-4e3d-b2f4-1386e3129360"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000198074</p> + <p>hgnc.symbol: AKR1B10</p> + <p>ncbigene: 57016</p> + <p>uniprot: O60218</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000176020" fbc:label="ENSG00000176020" fbc:name="ENSG00000176020" metaid="_513bae08-bdd4-4b97-98ae-07e801676dfe"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000176020</p> + <p>hgnc.symbol: AMIGO3</p> + <p>ncbigene: 386724</p> + <p>uniprot: Q86WK7</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000156510" fbc:label="ENSG00000156510" fbc:name="ENSG00000156510" metaid="_61c6553c-2336-4290-82a1-7d87591a8fd8"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000156510</p> + <p>hgnc.symbol: HKDC1</p> + <p>ncbigene: 80201</p> + <p>uniprot: Q2TB90</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000108479" fbc:label="ENSG00000108479" fbc:name="ENSG00000108479" metaid="aacb39b1-6ea5-4359-97fc-d8c44b24d923"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000108479</p> + <p>hgnc.symbol: GALK1</p> + <p>ncbigene: 2584</p> + <p>uniprot: P51570</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000171174" fbc:label="ENSG00000171174" fbc:name="ENSG00000171174" metaid="d405b7b0-3b31-4a66-97af-a85fa4a32ce6"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000171174</p> + <p>hgnc.symbol: RBKS</p> + <p>ncbigene: 64080</p> + <p>uniprot: Q9H477</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000259030" fbc:label="ENSG00000259030" fbc:name="ENSG00000259030" metaid="df89c41c-5769-4933-a26d-75489f2009cb"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000259030</p> + <p>hgnc.symbol: FPGT-TNNI3K</p> + <p>ncbigene: 100526835</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000078237" fbc:label="ENSG00000078237" fbc:name="ENSG00000078237" metaid="a9faff55-64a8-4038-b4b9-e85a053970f0"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000078237</p> + <p>hgnc.symbol: TIGAR</p> + <p>ncbigene: 57103</p> + <p>uniprot: Q9NQ88</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000171298" fbc:label="ENSG00000171298" fbc:name="ENSG00000171298" metaid="_510705a7-d23b-480a-bb95-8b9bcdcd3c9b"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000171298</p> + <p>hgnc.symbol: GAA</p> + <p>ncbigene: 2548</p> + <p>uniprot: P10253</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000117308" fbc:label="ENSG00000117308" fbc:name="ENSG00000117308" metaid="ecfe5f24-1fb3-4f45-8964-128b17595266"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000117308</p> + <p>hgnc.symbol: GALE</p> + <p>ncbigene: 2582</p> + <p>uniprot: Q14376</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000156958" fbc:label="ENSG00000156958" fbc:name="ENSG00000156958" metaid="_0ffa4e53-a04d-43a9-86a7-7017ab4b8bb0"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000156958</p> + <p>hgnc.symbol: GALK2</p> + <p>ncbigene: 2585</p> + <p>uniprot: Q01415</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000112699" fbc:label="ENSG00000112699" fbc:name="ENSG00000112699" metaid="_0d9ddbad-2dcb-402f-9849-c6ae59283884"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000112699</p> + <p>hgnc.symbol: GMDS</p> + <p>ncbigene: 2762</p> + <p>uniprot: O60547</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000156515" fbc:label="ENSG00000156515" fbc:name="ENSG00000156515" metaid="_1b7eb559-32a1-41f1-89ee-9ea63fc8ebb1"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000156515</p> + <p>hgnc.symbol: HK1</p> + <p>ncbigene: 3098</p> + <p>uniprot: P19367</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000130066" fbc:label="ENSG00000130066" fbc:name="ENSG00000130066" metaid="_21cc9685-34dc-4f6f-b332-e409179228f9"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000130066</p> + <p>hgnc.symbol: SAT1</p> + <p>ncbigene: 6303</p> + <p>uniprot: P21673</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000152556" fbc:label="ENSG00000152556" fbc:name="ENSG00000152556" metaid="_9978139a-2d36-41b2-8a16-ae119ad9c62a"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000152556</p> + <p>hgnc.symbol: PFKM</p> + <p>ncbigene: 5213</p> + <p>uniprot: P08237</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000178802" fbc:label="ENSG00000178802" fbc:name="ENSG00000178802" metaid="_4cd75726-c25f-4f11-b645-1f763ef8eb84"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000178802</p> + <p>hgnc.symbol: MPI</p> + <p>ncbigene: 4351</p> + <p>uniprot: P34949</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000158019" fbc:label="ENSG00000158019" fbc:name="ENSG00000158019" metaid="_538c0091-8464-47eb-91e1-646a853db46d"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000158019</p> + <p>hgnc.symbol: BABAM2</p> + <p>ncbigene: 9577</p> + <p>uniprot: Q9NXR7</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000140650" fbc:label="ENSG00000140650" fbc:name="ENSG00000140650" metaid="_1fe1abbd-efb3-45fd-aac2-755de9d9f7c8"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000140650</p> + <p>hgnc.symbol: PMM2</p> + <p>ncbigene: 5373</p> + <p>uniprot: O15305</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000166262" fbc:label="ENSG00000166262" fbc:name="ENSG00000166262" metaid="cfd467d1-528c-484b-8fda-084b7869c1f4"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000166262</p> + <p>hgnc.symbol: FAM227B</p> + <p>ncbigene: 196951</p> + <p>uniprot: Q96M60</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000169299" fbc:label="ENSG00000169299" fbc:name="ENSG00000169299" metaid="_629f4e87-2b63-44ab-beb3-af1d667022ad"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000169299</p> + <p>hgnc.symbol: PGM2</p> + <p>ncbigene: 55276</p> + <p>uniprot: Q96G03</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000158571" fbc:label="ENSG00000158571" fbc:name="ENSG00000158571" metaid="_4c698159-e0c6-4eed-b154-53776218f614"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000158571</p> + <p>hgnc.symbol: PFKFB1</p> + <p>ncbigene: 5207</p> + <p>uniprot: P16118</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000160883" fbc:label="ENSG00000160883" fbc:name="ENSG00000160883" metaid="a2ac8838-366b-48b0-80e3-3274be26154e"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000160883</p> + <p>hgnc.symbol: HK3</p> + <p>ncbigene: 3101</p> + <p>uniprot: P52790</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000141504" fbc:label="ENSG00000141504" fbc:name="ENSG00000141504" metaid="_54737a26-c3ba-47f6-9e01-83c9eba83079"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000141504</p> + <p>hgnc.symbol: SAT2</p> + <p>ncbigene: 112483</p> + <p>uniprot: Q96F10</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000257335" fbc:label="ENSG00000257335" fbc:name="ENSG00000257335" metaid="_2f618266-9c9a-4c56-a73a-97dc9c6829b2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000257335</p> + <p>hgnc.symbol: MGAM</p> + <p>ncbigene: 8972</p> + <p>uniprot: O43451</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000180953" fbc:label="ENSG00000180953" fbc:name="ENSG00000180953" metaid="_125ff8ee-12ec-4eef-8955-07983faac86b"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000180953</p> + <p>hgnc.symbol: ST20</p> + <p>uniprot: Q9HBF5</p> + </body> + </notes> + </fbc:geneProduct> + </fbc:listOfGeneProducts> + <groups:listOfGroups> + <groups:group groups:id="group102" groups:kind="classification" groups:name="Pentose phosphate pathway"> + <groups:listOfMembers> + <groups:member groups:idRef="R_HMR_4710"/> + <groups:member groups:idRef="R_RPEc"/> + <groups:member groups:idRef="R_PGLc"/> + <groups:member groups:idRef="R_GLYPHEHYc"/> + <groups:member groups:idRef="R_GNDc"/> + <groups:member groups:idRef="R_ABTD1"/> + <groups:member groups:idRef="R_HMR_4565"/> + <groups:member groups:idRef="R_HMR_9799"/> + <groups:member groups:idRef="R_HMR_4841"/> + <groups:member groups:idRef="R_HMR_4501"/> + <groups:member groups:idRef="R_HMR_4567"/> + <groups:member groups:idRef="R_HMR_4304"/> + <groups:member groups:idRef="R_HMR_4568"/> + <groups:member groups:idRef="R_HMR_4623"/> + <groups:member groups:idRef="R_HMR_4404"/> + <groups:member groups:idRef="R_HMR_4306"/> + <groups:member groups:idRef="R_HMR_4625"/> + <groups:member groups:idRef="R_G6PDH2c"/> + <groups:member groups:idRef="R_HMR_8074"/> + <groups:member groups:idRef="R_HMR_4052"/> + <groups:member groups:idRef="R_HMR_4350"/> + <groups:member groups:idRef="R_HMR_8653"/> + <groups:member groups:idRef="R_HMR_4351"/> + <groups:member groups:idRef="R_HMR_4352"/> + <groups:member groups:idRef="R_HMR_4473"/> + <groups:member groups:idRef="R_HMR_4474"/> + <groups:member groups:idRef="R_HMR_9800"/> + <groups:member groups:idRef="R_HMR_4354"/> + <groups:member groups:idRef="R_HMR_4398"/> + <groups:member groups:idRef="R_HMR_4476"/> + <groups:member groups:idRef="R_HMR_4477"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="group66" groups:kind="classification" groups:name="Galactose metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_HMR_4775"/> + <groups:member groups:idRef="R_HMR_4303"/> + <groups:member groups:idRef="R_HMR_4831"/> + <groups:member groups:idRef="R_HMR_4128"/> + <groups:member groups:idRef="R_HMR_4414"/> + <groups:member groups:idRef="R_HMR_4832"/> + <groups:member groups:idRef="R_HMR_4415"/> + <groups:member groups:idRef="R_HMR_4416"/> + <groups:member groups:idRef="R_HMR_3944"/> + <groups:member groups:idRef="R_FBA5"/> + <groups:member groups:idRef="R_HMR_8762"/> + <groups:member groups:idRef="R_HMR_4130"/> + <groups:member groups:idRef="R_KHK3"/> + <groups:member groups:idRef="R_HMR_4131"/> + <groups:member groups:idRef="R_HMR_7674"/> + <groups:member groups:idRef="R_HMR_4132"/> + <groups:member groups:idRef="R_HMR_8761"/> + <groups:member groups:idRef="R_HMR_8766"/> + <groups:member groups:idRef="R_HMR_8767"/> + <groups:member groups:idRef="R_HMR_8764"/> + <groups:member groups:idRef="R_HMR_4774"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="group65" groups:kind="classification" groups:name="Fructose and mannose metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_HMR_4401"/> + <groups:member groups:idRef="R_RE1342C"/> + <groups:member groups:idRef="R_HMR_4402"/> + <groups:member groups:idRef="R_HMR_4315"/> + <groups:member groups:idRef="R_HMR_4403"/> + <groups:member groups:idRef="R_HMR_8768"/> + <groups:member groups:idRef="R_HMR_4316"/> + <groups:member groups:idRef="R_HMR_4317"/> + <groups:member groups:idRef="R_HMR_4318"/> + <groups:member groups:idRef="R_HMR_4319"/> + <groups:member groups:idRef="R_HMR_4706"/> + <groups:member groups:idRef="R_HMR_4490"/> + <groups:member groups:idRef="R_HMR_4383"/> + <groups:member groups:idRef="R_HMR_4297"/> + <groups:member groups:idRef="R_HMR_4385"/> + <groups:member groups:idRef="R_HMR_0454"/> + <groups:member groups:idRef="R_HMR_4320"/> + <groups:member groups:idRef="R_HMR_4386"/> + <groups:member groups:idRef="R_HMR_4310"/> + <groups:member groups:idRef="R_HMR_4387"/> + <groups:member groups:idRef="R_HMR_4399"/> + <groups:member groups:idRef="R_HMR_4356"/> + <groups:member groups:idRef="R_HMR_4400"/> + </groups:listOfMembers> + </groups:group> + </groups:listOfGroups> + <listOfUnitDefinitions> + <unitDefinition id="mmol_per_gDW_per_hr" name="mmol_per_gDW_per_hr"> + <listOfUnits> + <unit exponent="-1" kind="gram" multiplier="1" scale="0"/> + <unit exponent="1" kind="mole" multiplier="1" scale="-3"/> + <unit exponent="-1" kind="second" multiplier="3600" scale="0"/> + </listOfUnits> + </unitDefinition> + </listOfUnitDefinitions> + <listOfCompartments> + <compartment constant="true" id="r" metaid="_884904cc-79eb-427d-b91b-3858ebf3f596" name="Endoplasmic reticulum" sboTerm="SBO:0000290" spatialDimensions="3"/> + <compartment constant="true" id="s" metaid="c2091cbb-7712-4d49-8306-2c20463fde5c" name="Extracellular" sboTerm="SBO:0000290" spatialDimensions="3"/> + <compartment constant="true" id="c" metaid="_9e846238-9a89-4c76-93c0-2ad9f62b3f5f" name="Cytosol" sboTerm="SBO:0000290" spatialDimensions="3"/> + <compartment constant="true" id="l" metaid="_1eae95e5-962a-462b-b3af-730aa2c62bf8" name="Lysosome" sboTerm="SBO:0000290" spatialDimensions="3"/> + <compartment constant="true" id="g" metaid="a36d7b30-c3c7-46e7-91bc-11d957f9efde" name="Golgi apparatus" sboTerm="SBO:0000290" spatialDimensions="3"/> + </listOfCompartments> + <listOfSpecies> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2" hasOnlySubstanceUnits="true" id="M_m02553c" initialConcentration="0" metaid="cdf46bb5-653c-4e4c-bf33-28c9d8abecaa" name="NADH" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00004</p> + <p>hmdb: HMDB01487</p> + <p>bigg.metabolite: nadh</p> + <p>chebi: CHEBI:16908</p> + <p>pubchem.compound: 928</p> + <p>metanetx.chemical: MNXM10</p> + <p>formula: C21H27N7O14P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cdf46bb5-653c-4e4c-bf33-28c9d8abecaa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00004"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01487"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadh"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16908"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/928"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H21N5O15P2" hasOnlySubstanceUnits="true" id="M_m01949c" initialConcentration="0" metaid="e5ead912-a5af-4eae-a2ca-54c38ddb04ab" name="GDP-4-dehydro-6-deoxy-D-mannose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01222</p> + <p>bigg.metabolite: gdpddman</p> + <p>chebi: CHEBI:16955</p> + <p>pubchem.compound: 439446</p> + <p>metanetx.chemical: MNXM516</p> + <p>formula: C16H21N5O15P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e5ead912-a5af-4eae-a2ca-54c38ddb04ab"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01222"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gdpddman"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16955"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439446"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM516"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_tag1p_D_c" initialConcentration="0" metaid="c7984b99-3c59-482c-a42b-699b4ec0058c" name="D-Tagatose 1-Phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>bigg.metabolite: tag1p__D</p> + <p>pubchem.compound: 6101730</p> + <p>metanetx.chemical: MNXM11293</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c7984b99-3c59-482c-a42b-699b4ec0058c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/tag1p__D"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6101730"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM11293"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H14N2O3" hasOnlySubstanceUnits="true" id="M_glyphe_c" initialConcentration="0" metaid="_6fc683df-22a4-460b-bfae-8fbe15701927" name="Glycyl-Phenylalanine" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>hmdb: HMDB0028848</p> + <p>bigg.metabolite: glyphe</p> + <p>inchi: InChI=1S/C11H14N2O3/c12-7-10(14)13-9(11(15)16)6-8-4-2-1-3-5-8/h1-5,9H,6-7,12H2,(H,13,14)(H,15,16)</p> + <p>metanetx.chemical: MNXM8669</p> + <p>formula: C11H14N2O3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6fc683df-22a4-460b-bfae-8fbe15701927"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB0028848"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glyphe"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C11H14N2O3/c12-7-10(14)13-9(11(15)16)6-8-4-2-1-3-5-8/h1-5,9H,6-7,12H2,(H,13,14)(H,15,16)"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM8669"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01965c" initialConcentration="0" metaid="_94c2bee0-9d72-498c-ac24-cfc89072b989" name="glucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00031</p> + <p>hmdb: HMDB00122</p> + <p>bigg.metabolite: glc__D</p> + <p>chebi: CHEBI:4167</p> + <p>pubchem.compound: 5793</p> + <p>metanetx.chemical: MNXM41 || MNXM99</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94c2bee0-9d72-498c-ac24-cfc89072b989"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM41"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM99"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_m02945s" initialConcentration="0" metaid="a013605d-e919-4407-ac07-58f2fa04eec0" name="sucrose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00089</p> + <p>hmdb: HMDB00258</p> + <p>bigg.metabolite: sucr</p> + <p>chebi: CHEBI:17992</p> + <p>pubchem.compound: 5988</p> + <p>metanetx.chemical: MNXM167</p> + <p>formula: C12H22O11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a013605d-e919-4407-ac07-58f2fa04eec0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00089"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00258"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/sucr"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17992"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5988"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM167"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01844c" initialConcentration="0" metaid="c12fb463-a912-4ae2-a619-e6e7123535ff" name="fructose-3-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01965g" initialConcentration="0" metaid="c3ec1b4f-c423-4fb7-ba05-e21ba291103b" name="glucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00031</p> + <p>hmdb: HMDB00122</p> + <p>bigg.metabolite: glc__D</p> + <p>chebi: CHEBI:4167</p> + <p>pubchem.compound: 5793</p> + <p>metanetx.chemical: MNXM41 || MNXM99</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c3ec1b4f-c423-4fb7-ba05-e21ba291103b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM41"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM99"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14O7" hasOnlySubstanceUnits="true" id="M_m03165c" initialConcentration="0" metaid="_7fccf573-a7f5-4aeb-823a-e1049fe4b5c1" name="sedoheptulose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C02076</p> + <p>chebi: CHEBI:16802</p> + <p>metanetx.chemical: MNXM44065</p> + <p>formula: C7H14O7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7fccf573-a7f5-4aeb-823a-e1049fe4b5c1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02076"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16802"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM44065"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O10P2" hasOnlySubstanceUnits="true" id="M_m01285c" initialConcentration="0" metaid="_521f7ad8-f72e-4338-a6f2-c0a842e7122b" name="ADP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00008</p> + <p>hmdb: HMDB01341</p> + <p>bigg.metabolite: adp</p> + <p>chebi: CHEBI:16761</p> + <p>pubchem.compound: 6022</p> + <p>metanetx.chemical: MNXM7</p> + <p>formula: C10H12N5O10P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_521f7ad8-f72e-4338-a6f2-c0a842e7122b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00008"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01341"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/adp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16761"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6022"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3" hasOnlySubstanceUnits="true" id="M_m01981c" initialConcentration="0" metaid="_28c079d9-0897-4cc1-ac53-057881862cfb" name="glyceraldehyde" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C02154</p> + <p>hmdb: HMDB01051</p> + <p>bigg.metabolite: glyald</p> + <p>chebi: CHEBI:5445</p> + <p>inchi: InChI=1S/C3H6O3/c4-1-3(6)2-5/h1,3,5-6H,2H2/t3-/m0/s1</p> + <p>pubchem.compound: 751</p> + <p>metanetx.chemical: MNXM435</p> + <p>formula: C3H6O3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28c079d9-0897-4cc1-ac53-057881862cfb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02154"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01051"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glyald"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:5445"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C3H6O3/c4-1-3(6)2-5/h1,3,5-6H,2H2/t3-/m0/s1"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/751"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM435"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O6" hasOnlySubstanceUnits="true" id="M_m01682c" initialConcentration="0" metaid="ae904b43-59ad-4e95-88e1-8e34700a9056" name="D-glucitol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00794</p> + <p>hmdb: HMDB00247</p> + <p>bigg.metabolite: sbt__D</p> + <p>chebi: CHEBI:17924</p> + <p>pubchem.compound: 5780</p> + <p>metanetx.chemical: MNXM469</p> + <p>formula: C6H14O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae904b43-59ad-4e95-88e1-8e34700a9056"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00794"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00247"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/sbt__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17924"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5780"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM469"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H13O9P" hasOnlySubstanceUnits="true" id="M_m02917c" initialConcentration="0" metaid="_42c68707-b6eb-4d18-8cc4-456bd62297d4" name="sorbitol-3-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>pubchem.compound: 129544</p> + <p>metanetx.chemical: MNXM48480</p> + <p>formula: C6H13O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_42c68707-b6eb-4d18-8cc4-456bd62297d4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/129544"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM48480"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040l" initialConcentration="0" metaid="eb95a981-8590-48ef-b0b9-b05c3507c687" name="H2O" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>lipidmaps: LMST01040128</p> + <p>kegg.compound: C00001</p> + <p>hmdb: HMDB02111</p> + <p>bigg.metabolite: h2o</p> + <p>chebi: CHEBI:15377</p> + <p>pubchem.compound: 962</p> + <p>metanetx.chemical: MNXM2</p> + <p>formula: H2O</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eb95a981-8590-48ef-b0b9-b05c3507c687"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2" hasOnlySubstanceUnits="true" id="M_m02553r" initialConcentration="0" metaid="a2069c73-802b-49cf-8f06-0e3f0be5669b" name="NADH" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00004</p> + <p>hmdb: HMDB01487</p> + <p>bigg.metabolite: nadh</p> + <p>chebi: CHEBI:16908</p> + <p>pubchem.compound: 928</p> + <p>metanetx.chemical: MNXM10</p> + <p>formula: C21H27N7O14P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a2069c73-802b-49cf-8f06-0e3f0be5669b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00004"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01487"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadh"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16908"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/928"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01965l" initialConcentration="0" metaid="_25dd65f2-2228-440c-baf3-9f621a7e5ff0" name="glucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00031</p> + <p>hmdb: HMDB00122</p> + <p>bigg.metabolite: glc__D</p> + <p>chebi: CHEBI:4167</p> + <p>pubchem.compound: 5793</p> + <p>metanetx.chemical: MNXM41 || MNXM99</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_25dd65f2-2228-440c-baf3-9f621a7e5ff0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM41"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM99"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2" hasOnlySubstanceUnits="true" id="M_m02553s" initialConcentration="0" metaid="c0b50a6c-29cd-4c06-82af-9fce71d23255" name="NADH" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00004</p> + <p>hmdb: HMDB01487</p> + <p>bigg.metabolite: nadh</p> + <p>chebi: CHEBI:16908</p> + <p>pubchem.compound: 928</p> + <p>metanetx.chemical: MNXM10</p> + <p>formula: C21H27N7O14P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c0b50a6c-29cd-4c06-82af-9fce71d23255"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00004"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01487"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadh"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16908"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/928"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01965s" initialConcentration="0" metaid="ad2dbd72-4542-4c0b-8986-e308b158e31f" name="glucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00031</p> + <p>hmdb: HMDB00122</p> + <p>bigg.metabolite: glc__D</p> + <p>chebi: CHEBI:4167</p> + <p>pubchem.compound: 5793</p> + <p>metanetx.chemical: MNXM41 || MNXM99</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ad2dbd72-4542-4c0b-8986-e308b158e31f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM41"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM99"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H18O8" hasOnlySubstanceUnits="true" id="M_m01913s" initialConcentration="0" metaid="ae24b707-1474-48c9-bc3e-184c9fc59f80" name="galactosylglycerol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C05401</p> + <p>chebi: CHEBI:15754</p> + <p>pubchem.compound: 16048618</p> + <p>metanetx.chemical: MNXM2608</p> + <p>formula: C9H18O8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae24b707-1474-48c9-bc3e-184c9fc59f80"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C05401"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15754"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/16048618"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2608"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040c" initialConcentration="0" metaid="dce3ae33-5567-405a-9fd7-b571c4dce0b0" name="H2O" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>lipidmaps: LMST01040128</p> + <p>kegg.compound: C00001</p> + <p>hmdb: HMDB02111</p> + <p>bigg.metabolite: h2o</p> + <p>chebi: CHEBI:15377</p> + <p>pubchem.compound: 962</p> + <p>metanetx.chemical: MNXM2</p> + <p>formula: H2O</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dce3ae33-5567-405a-9fd7-b571c4dce0b0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H11N4O11P2" hasOnlySubstanceUnits="true" id="M_m02161c" initialConcentration="0" metaid="_6588a61e-6e8e-4abf-b113-5c7d7bd46a74" name="IDP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00104</p> + <p>bigg.metabolite: idp</p> + <p>chebi: CHEBI:17808</p> + <p>pubchem.compound: 6831</p> + <p>metanetx.chemical: MNXM495</p> + <p>formula: C10H11N4O11P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6588a61e-6e8e-4abf-b113-5c7d7bd46a74"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00104"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/idp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17808"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6831"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM495"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2" hasOnlySubstanceUnits="true" id="M_m02552c" initialConcentration="0" metaid="c7546c47-b436-4f42-b25c-6a7ba5aae2db" name="NAD+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00003</p> + <p>hmdb: HMDB00902</p> + <p>bigg.metabolite: nad</p> + <p>chebi: CHEBI:15846</p> + <p>pubchem.compound: 5893</p> + <p>metanetx.chemical: MNXM8</p> + <p>formula: C21H26N7O14P2</p> + <p>charge: -1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c7546c47-b436-4f42-b25c-6a7ba5aae2db"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00003"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00902"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nad"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15846"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5893"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O11P2" hasOnlySubstanceUnits="true" id="M_m01948c" initialConcentration="0" metaid="a0bbd11c-f5e5-4615-aa55-824abf6e90cf" name="GDP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00035</p> + <p>hmdb: HMDB01201</p> + <p>bigg.metabolite: gdp</p> + <p>chebi: CHEBI:17552</p> + <p>pubchem.compound: 8977</p> + <p>metanetx.chemical: MNXM30</p> + <p>formula: C10H12N5O11P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a0bbd11c-f5e5-4615-aa55-824abf6e90cf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00035"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01201"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gdp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17552"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/8977"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m02455c" initialConcentration="0" metaid="_45e1757e-5e64-4141-add5-c15cc95139e6" name="mannose-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00275</p> + <p>bigg.metabolite: man6p</p> + <p>chebi: CHEBI:17369</p> + <p>pubchem.compound: 65127</p> + <p>metanetx.chemical: MNXM427</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_45e1757e-5e64-4141-add5-c15cc95139e6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00275"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/man6p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17369"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/65127"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM427"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H20O11" hasOnlySubstanceUnits="true" id="M_m00812s" initialConcentration="0" metaid="_00ff2bbd-493a-4113-b2e9-db7ee06461c7" name="3-ketolactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C05403</p> + <p>metanetx.chemical: MNXM36578</p> + <p>formula: C12H20O11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00ff2bbd-493a-4113-b2e9-db7ee06461c7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C05403"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM36578"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01746c" initialConcentration="0" metaid="_649c6e13-719a-4c6a-816c-e44a17666513" name="D-tagatose-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01097</p> + <p>bigg.metabolite: tag1p__D</p> + <p>chebi: CHEBI:4251</p> + <p>pubchem.compound: 439396</p> + <p>metanetx.chemical: MNXM795 || MNXM164716</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_649c6e13-719a-4c6a-816c-e44a17666513"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01097"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/tag1p__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4251"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439396"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM795"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM164716"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O12P2" hasOnlySubstanceUnits="true" id="M_m01843c" initialConcentration="0" metaid="fd1b4759-172c-46ec-a6af-449961360664" name="fructose-2,6-bisphosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00665</p> + <p>bigg.metabolite: f26bp</p> + <p>chebi: CHEBI:28602</p> + <p>pubchem.compound: 105021</p> + <p>metanetx.chemical: MNXM651</p> + <p>formula: C6H10O12P2</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fd1b4759-172c-46ec-a6af-449961360664"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00665"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/f26bp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28602"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/105021"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM651"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O13P3" hasOnlySubstanceUnits="true" id="M_m01371c" initialConcentration="0" metaid="_7c99bce2-d604-4273-9c90-72c3d53e303d" name="ATP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00002</p> + <p>hmdb: HMDB00538</p> + <p>bigg.metabolite: atp</p> + <p>chebi: CHEBI:15422</p> + <p>pubchem.compound: 5957</p> + <p>metanetx.chemical: MNXM3</p> + <p>formula: C10H12N5O13P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7c99bce2-d604-4273-9c90-72c3d53e303d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00002"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00538"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/atp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15422"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5957"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2" hasOnlySubstanceUnits="true" id="M_m01596c" initialConcentration="0" metaid="_24121835-f370-42a9-89c1-f78191770ba5" name="CO2" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00011</p> + <p>hmdb: HMDB01967</p> + <p>bigg.metabolite: co2</p> + <p>chebi: CHEBI:16526</p> + <p>inchi: InChI=1S/CO2/c2-1-3</p> + <p>pubchem.compound: 280</p> + <p>metanetx.chemical: MNXM13</p> + <p>formula: CO2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24121835-f370-42a9-89c1-f78191770ba5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00011"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01967"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/co2"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16526"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/CO2/c2-1-3"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/280"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2" hasOnlySubstanceUnits="true" id="M_m02552s" initialConcentration="0" metaid="_81c63c25-41ec-418f-a7ae-8917ef8e605f" name="NAD+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00003</p> + <p>hmdb: HMDB00902</p> + <p>bigg.metabolite: nad</p> + <p>chebi: CHEBI:15846</p> + <p>pubchem.compound: 5893</p> + <p>metanetx.chemical: MNXM8</p> + <p>formula: C21H26N7O14P2</p> + <p>charge: -1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_81c63c25-41ec-418f-a7ae-8917ef8e605f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00003"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00902"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nad"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15846"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5893"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C15H22N2O17P2" hasOnlySubstanceUnits="true" id="M_m03108c" initialConcentration="0" metaid="_59be01c8-ef39-4d12-ba62-dae2abc178b3" name="UDP-glucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00029</p> + <p>bigg.metabolite: udpg</p> + <p>chebi: CHEBI:18066</p> + <p>pubchem.compound: 53477679</p> + <p>metanetx.chemical: MNXM52</p> + <p>formula: C15H22N2O17P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_59be01c8-ef39-4d12-ba62-dae2abc178b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00029"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udpg"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18066"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/53477679"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM52"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2" hasOnlySubstanceUnits="true" id="M_m02552r" initialConcentration="0" metaid="_97a217ca-280a-4b3d-a2b8-ef92ea5df65e" name="NAD+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00003</p> + <p>hmdb: HMDB00902</p> + <p>bigg.metabolite: nad</p> + <p>chebi: CHEBI:15846</p> + <p>pubchem.compound: 5893</p> + <p>metanetx.chemical: MNXM8</p> + <p>formula: C21H26N7O14P2</p> + <p>charge: -1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97a217ca-280a-4b3d-a2b8-ef92ea5df65e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00003"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00902"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nad"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15846"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5893"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H12N3O11P2" hasOnlySubstanceUnits="true" id="M_m01424c" initialConcentration="0" metaid="_430a23d5-3b46-409f-8228-66cb698937a6" name="CDP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00112</p> + <p>bigg.metabolite: cdp</p> + <p>chebi: CHEBI:17239</p> + <p>pubchem.compound: 6132</p> + <p>metanetx.chemical: MNXM220</p> + <p>formula: C9H12N3O11P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_430a23d5-3b46-409f-8228-66cb698937a6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00112"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/cdp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17239"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6132"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM220"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2" hasOnlySubstanceUnits="true" id="M_m01596r" initialConcentration="0" metaid="_11e6d111-bf70-414d-9f90-152505ad9772" name="CO2" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00011</p> + <p>hmdb: HMDB01967</p> + <p>bigg.metabolite: co2</p> + <p>chebi: CHEBI:16526</p> + <p>inchi: InChI=1S/CO2/c2-1-3</p> + <p>pubchem.compound: 280</p> + <p>metanetx.chemical: MNXM13</p> + <p>formula: CO2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_11e6d111-bf70-414d-9f90-152505ad9772"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00011"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01967"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/co2"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16526"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/CO2/c2-1-3"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/280"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O6" hasOnlySubstanceUnits="true" id="M_m01909c" initialConcentration="0" metaid="_32fccb2f-e504-4de0-be7b-32b6e5e909af" name="galactitol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01697</p> + <p>hmdb: HMDB00107</p> + <p>bigg.metabolite: galt</p> + <p>chebi: CHEBI:16813</p> + <p>inchi: InChI=1S/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2/t3-,4+,5+,6-</p> + <p>pubchem.compound: 11850</p> + <p>metanetx.chemical: MNXM1233</p> + <p>formula: C6H14O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_32fccb2f-e504-4de0-be7b-32b6e5e909af"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01697"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00107"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/galt"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16813"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2/t3-,4+,5+,6-"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/11850"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1233"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m02454c" initialConcentration="0" metaid="a9ce0266-f645-439d-b18d-d18a8b0913d4" name="mannose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00636</p> + <p>hmdb: HMDB06330</p> + <p>bigg.metabolite: man1p</p> + <p>chebi: CHEBI:35374</p> + <p>pubchem.compound: 644175</p> + <p>metanetx.chemical: MNXM721</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a9ce0266-f645-439d-b18d-d18a8b0913d4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00636"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB06330"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/man1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:35374"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/644175"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM721"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H12O5" hasOnlySubstanceUnits="true" id="M_abt_D_c" initialConcentration="0" metaid="_26494228-cd48-4a29-af7c-1b74871615b2" name="D-Arabitol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>bigg.metabolite: abt__D</p> + <p>inchi: InChI=1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4-/m1/s1</p> + <p>metanetx.chemical: MNXM1018</p> + <p>formula: C5H12O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_26494228-cd48-4a29-af7c-1b74871615b2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/abt__D"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4-/m1/s1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1018"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O12P2" hasOnlySubstanceUnits="true" id="M_m01717c" initialConcentration="0" metaid="_2615d46c-444b-4efb-8351-a5365965023d" name="D-mannose-1,6-bisphosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C03693</p> + <p>pubchem.compound: 3036654</p> + <p>metanetx.chemical: MNXM48557</p> + <p>formula: C6H10O12P2</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2615d46c-444b-4efb-8351-a5365965023d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C03693"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/3036654"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM48557"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O14P3" hasOnlySubstanceUnits="true" id="M_m02034c" initialConcentration="0" metaid="_949f82be-8e6d-4143-98fb-13e8a920d815" name="GTP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00044</p> + <p>hmdb: HMDB01273</p> + <p>bigg.metabolite: gtp</p> + <p>chebi: CHEBI:15996</p> + <p>pubchem.compound: 6830</p> + <p>metanetx.chemical: MNXM51</p> + <p>formula: C10H12N5O14P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_949f82be-8e6d-4143-98fb-13e8a920d815"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00044"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01273"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gtp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15996"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6830"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01911c" initialConcentration="0" metaid="_71807f0a-77fc-4a83-83ec-587af94cb10d" name="galactose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C03384</p> + <p>metanetx.chemical: MNXM336</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_71807f0a-77fc-4a83-83ec-587af94cb10d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C03384"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM336"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01745c" initialConcentration="0" metaid="a276d8cf-f71a-4d12-bd23-bd4bf3944d06" name="D-tagatose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00795</p> + <p>hmdb: HMDB03418</p> + <p>bigg.metabolite: tag__D</p> + <p>chebi: CHEBI:47693</p> + <p>pubchem.compound: 92092</p> + <p>metanetx.chemical: MNXM92401</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a276d8cf-f71a-4d12-bd23-bd4bf3944d06"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00795"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB03418"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/tag__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:47693"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/92092"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM92401"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01842c" initialConcentration="0" metaid="_5c5c742d-cd6a-48ff-87bb-0027c8b6eefe" name="fructose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01094</p> + <p>bigg.metabolite: f1p</p> + <p>chebi: CHEBI:18105</p> + <p>pubchem.compound: 10400369</p> + <p>metanetx.chemical: MNXM145568</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5c5c742d-cd6a-48ff-87bb-0027c8b6eefe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01094"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/f1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18105"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/10400369"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM145568"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H23N5O16P2" hasOnlySubstanceUnits="true" id="M_m01951c" initialConcentration="0" metaid="e11e80c6-cd80-4ea3-96ca-05f1b24ed09b" name="GDP-mannose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00096</p> + <p>bigg.metabolite: gdpmann</p> + <p>chebi: CHEBI:15820</p> + <p>pubchem.compound: 18396</p> + <p>metanetx.chemical: MNXM82</p> + <p>formula: C16H23N5O16P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e11e80c6-cd80-4ea3-96ca-05f1b24ed09b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00096"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gdpmann"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15820"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/18396"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM82"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02846c" initialConcentration="0" metaid="f88cd838-6cfd-4de1-80dd-47d8a4a5ec8c" name="ribulose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00199</p> + <p>bigg.metabolite: ru5p__D</p> + <p>chebi: CHEBI:17363</p> + <p>pubchem.compound: 439184</p> + <p>metanetx.chemical: MNXM145 || MNXM186</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f88cd838-6cfd-4de1-80dd-47d8a4a5ec8c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00199"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/ru5p__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17363"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439184"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM145"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM186"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H7O7P" hasOnlySubstanceUnits="true" id="M_m01785c" initialConcentration="0" metaid="_81dee1de-9ff0-4d2b-8f6f-99cf059accdf" name="erythrose-4-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00279</p> + <p>bigg.metabolite: e4p</p> + <p>chebi: CHEBI:48153</p> + <p>pubchem.compound: 122357</p> + <p>metanetx.chemical: MNXM258</p> + <p>formula: C4H7O7P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_81dee1de-9ff0-4d2b-8f6f-99cf059accdf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00279"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/e4p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:48153"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/122357"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM258"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m01761c" initialConcentration="0" metaid="e6b875ce-6d49-4f17-bac7-17eeb57f18fa" name="D-xylulose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00231</p> + <p>bigg.metabolite: xu5p__D</p> + <p>chebi: CHEBI:16332</p> + <p>pubchem.compound: 439190</p> + <p>metanetx.chemical: MNXM186</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e6b875ce-6d49-4f17-bac7-17eeb57f18fa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00231"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/xu5p__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16332"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439190"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM186"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-5" fbc:chemicalFormula="C5H8O14P3" hasOnlySubstanceUnits="true" id="M_m02806c" initialConcentration="0" metaid="_1c326a8e-e821-4f60-b8b0-51d295a2d118" name="PRPP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00119</p> + <p>bigg.metabolite: prpp</p> + <p>chebi: CHEBI:17111</p> + <p>pubchem.compound: 7339</p> + <p>metanetx.chemical: MNXM91</p> + <p>formula: C5H8O14P3</p> + <p>charge: -5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1c326a8e-e821-4f60-b8b0-51d295a2d118"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00119"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/prpp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17111"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/7339"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM91"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O7P" hasOnlySubstanceUnits="true" id="M_m00639c" initialConcentration="0" metaid="_669cde35-0c63-4dca-9a0d-3b24adb00ab7" name="2-deoxy-D-ribose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00672</p> + <p>bigg.metabolite: 2dr1p</p> + <p>chebi: CHEBI:28542</p> + <p>pubchem.compound: 5460448</p> + <p>metanetx.chemical: MNXM789</p> + <p>formula: C5H9O7P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_669cde35-0c63-4dca-9a0d-3b24adb00ab7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00672"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/2dr1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28542"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5460448"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM789"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C15H22N2O17P2" hasOnlySubstanceUnits="true" id="M_m03107c" initialConcentration="0" metaid="_13becef8-df25-45f6-b797-6efd47ae03e2" name="UDP-galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00052</p> + <p>hmdb: HMDB00302</p> + <p>bigg.metabolite: udpgal</p> + <p>chebi: CHEBI:67119</p> + <p>pubchem.compound: 18068</p> + <p>metanetx.chemical: MNXM89795</p> + <p>formula: C15H22N2O17P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_13becef8-df25-45f6-b797-6efd47ae03e2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00052"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00302"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udpgal"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:67119"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/18068"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89795"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O12P2" hasOnlySubstanceUnits="true" id="M_m02955c" initialConcentration="0" metaid="_8cb2adcf-2881-4f20-8029-273b42f851bb" name="tagatose-1,6-bisphosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C03785</p> + <p>chebi: CHEBI:4250</p> + <p>pubchem.compound: 440117</p> + <p>metanetx.chemical: MNXM1324 || MNXM164715</p> + <p>formula: C6H10O12P2</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8cb2adcf-2881-4f20-8029-273b42f851bb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C03785"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4250"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/440117"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1324"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM164715"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="-2" fbc:chemicalFormula="C15H22N2O17P2" hasOnlySubstanceUnits="true" id="M_m03107g" initialConcentration="0" metaid="def6fe8a-f42f-410d-9563-fee60d2fb154" name="UDP-galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00052</p> + <p>hmdb: HMDB00302</p> + <p>bigg.metabolite: udpgal</p> + <p>chebi: CHEBI:67119</p> + <p>pubchem.compound: 18068</p> + <p>metanetx.chemical: MNXM89795</p> + <p>formula: C15H22N2O17P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#def6fe8a-f42f-410d-9563-fee60d2fb154"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00052"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00302"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udpgal"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:67119"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/18068"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89795"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02846r" initialConcentration="0" metaid="_627f203c-3273-472d-98be-2227cb9aa716" name="ribulose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00199</p> + <p>bigg.metabolite: ru5p__D</p> + <p>chebi: CHEBI:17363</p> + <p>pubchem.compound: 439184</p> + <p>metanetx.chemical: MNXM145 || MNXM186</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_627f203c-3273-472d-98be-2227cb9aa716"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00199"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/ru5p__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17363"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439184"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM145"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM186"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_m02373c" initialConcentration="0" metaid="_6b685091-21fd-4e43-8051-0606e34176e9" name="L-fuculose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01721</p> + <p>chebi: CHEBI:17617</p> + <p>pubchem.compound: 6857362</p> + <p>metanetx.chemical: MNXM1748</p> + <p>formula: C6H12O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6b685091-21fd-4e43-8051-0606e34176e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01721"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17617"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6857362"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1748"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m02453c" initialConcentration="0" metaid="_387d9eaf-8114-454d-9cbb-b68867f9fd37" name="mannose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00159</p> + <p>hmdb: HMDB00169</p> + <p>bigg.metabolite: man</p> + <p>chebi: CHEBI:4208</p> + <p>pubchem.compound: 18950</p> + <p>metanetx.chemical: MNXM182</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_387d9eaf-8114-454d-9cbb-b68867f9fd37"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00159"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00169"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/man"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4208"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/18950"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM182"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O6" hasOnlySubstanceUnits="true" id="M_m00810s" initialConcentration="0" metaid="_888b4b49-c5cf-4b3d-ae82-cbfdc5192782" name="3-keto-beta-D-galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C05394</p> + <p>chebi: CHEBI:27453</p> + <p>pubchem.compound: 440653</p> + <p>metanetx.chemical: MNXM4339</p> + <p>formula: C6H10O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_888b4b49-c5cf-4b3d-ae82-cbfdc5192782"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C05394"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:27453"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/440653"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM4339"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_m02425c" initialConcentration="0" metaid="_1ec20d61-01eb-4ae4-b50f-08dfa29f333c" name="L-xylulose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00312</p> + <p>hmdb: HMDB00751</p> + <p>bigg.metabolite: xylu__L</p> + <p>chebi: CHEBI:17399</p> + <p>inchi: InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2/t3-,5+/m0/s1</p> + <p>pubchem.compound: 22253</p> + <p>metanetx.chemical: MNXM597</p> + <p>formula: C5H10O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1ec20d61-01eb-4ae4-b50f-08dfa29f333c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00312"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00751"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/xylu__L"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17399"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2/t3-,5+/m0/s1"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22253"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM597"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01910c" initialConcentration="0" metaid="_74a87466-9b69-4cc8-9d29-8036f2c76d6a" name="galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00984</p> + <p>hmdb: HMDB00143</p> + <p>bigg.metabolite: gal</p> + <p>chebi: CHEBI:28061</p> + <p>pubchem.compound: 439357</p> + <p>metanetx.chemical: MNXM112 || MNXM390</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_74a87466-9b69-4cc8-9d29-8036f2c76d6a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00984"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00143"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gal"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28061"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439357"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM112"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM390"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO2" hasOnlySubstanceUnits="true" id="M_m02724c" initialConcentration="0" metaid="c4ed6ede-5c56-4346-acbd-7efd7f34b58b" name="phenylalanine" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00079</p> + <p>hmdb: HMDB00159</p> + <p>bigg.metabolite: phe__L</p> + <p>chebi: CHEBI:17295</p> + <p>pubchem.compound: 6140</p> + <p>metanetx.chemical: MNXM97</p> + <p>formula: C9H11NO2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c4ed6ede-5c56-4346-acbd-7efd7f34b58b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00079"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00159"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/phe__L"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17295"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6140"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM97"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02845c" initialConcentration="0" metaid="_7d86d6c1-f376-4349-a4ec-cc8fb8350868" name="ribose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00117</p> + <p>bigg.metabolite: r5p</p> + <p>chebi: CHEBI:17797</p> + <p>pubchem.compound: 440101</p> + <p>metanetx.chemical: MNXM116 || MNXM15900</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7d86d6c1-f376-4349-a4ec-cc8fb8350868"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00117"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/r5p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17797"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/440101"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM116"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM15900"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H12N3O14P3" hasOnlySubstanceUnits="true" id="M_m01623c" initialConcentration="0" metaid="b14f1569-0718-46ce-81e7-1b85790417ad" name="CTP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00063</p> + <p>bigg.metabolite: ctp</p> + <p>chebi: CHEBI:17677</p> + <p>pubchem.compound: 6176</p> + <p>metanetx.chemical: MNXM63</p> + <p>formula: C9H12N3O14P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b14f1569-0718-46ce-81e7-1b85790417ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00063"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/ctp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17677"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6176"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM63"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H23N5O15P2" hasOnlySubstanceUnits="true" id="M_m01950c" initialConcentration="0" metaid="_945a262e-c045-4dfe-a70d-e948ad2a61ff" name="GDP-L-fucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00325</p> + <p>bigg.metabolite: gdpfuc</p> + <p>chebi: CHEBI:17009</p> + <p>pubchem.compound: 439211</p> + <p>metanetx.chemical: MNXM193</p> + <p>formula: C16H23N5O15P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_945a262e-c045-4dfe-a70d-e948ad2a61ff"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00325"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gdpfuc"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17009"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439211"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM193"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NO2" hasOnlySubstanceUnits="true" id="M_m01986c" initialConcentration="0" metaid="_9866d694-865b-4df9-ab20-eb10d114f23c" name="glycine" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00037</p> + <p>hmdb: HMDB00123</p> + <p>bigg.metabolite: gly</p> + <p>chebi: CHEBI:15428</p> + <p>inchi: InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)</p> + <p>pubchem.compound: 750</p> + <p>metanetx.chemical: MNXM29</p> + <p>formula: C2H5NO2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9866d694-865b-4df9-ab20-eb10d114f23c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00037"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00123"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gly"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15428"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/750"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM29"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H11N2O12P2" hasOnlySubstanceUnits="true" id="M_m03106c" initialConcentration="0" metaid="_97e640b3-1f1b-4e3b-abda-a1e2d84549fb" name="UDP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00015</p> + <p>hmdb: HMDB00295</p> + <p>bigg.metabolite: udp</p> + <p>chebi: CHEBI:17659</p> + <p>pubchem.compound: 6031</p> + <p>metanetx.chemical: MNXM17</p> + <p>formula: C9H11N2O12P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97e640b3-1f1b-4e3b-abda-a1e2d84549fb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00015"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00295"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17659"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6031"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01910l" initialConcentration="0" metaid="_76b653c7-d3c8-43c3-86cd-767b18a4ec92" name="galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00984</p> + <p>hmdb: HMDB00143</p> + <p>bigg.metabolite: gal</p> + <p>chebi: CHEBI:28061</p> + <p>pubchem.compound: 439357</p> + <p>metanetx.chemical: MNXM112 || MNXM390</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76b653c7-d3c8-43c3-86cd-767b18a4ec92"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00984"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00143"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gal"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28061"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439357"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM112"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM390"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_m02332s" initialConcentration="0" metaid="acda4521-1f6a-4dff-8902-9ff667fc71dd" name="lactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00243</p> + <p>hmdb: HMDB00186</p> + <p>bigg.metabolite: lcts</p> + <p>chebi: CHEBI:36219</p> + <p>pubchem.compound: 84571</p> + <p>metanetx.chemical: MNXM362</p> + <p>formula: C12H22O11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#acda4521-1f6a-4dff-8902-9ff667fc71dd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00243"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00186"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/lcts"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:36219"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/84571"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM362"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_m01159c" initialConcentration="0" metaid="_5d92060a-34c2-413d-a5c9-b2061168b482" name="6-deoxy-L-galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01019</p> + <p>hmdb: HMDB00174</p> + <p>bigg.metabolite: fuc__L</p> + <p>chebi: CHEBI:2181</p> + <p>pubchem.compound: 17106</p> + <p>metanetx.chemical: MNXM40586 || MNXM659</p> + <p>formula: C6H12O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5d92060a-34c2-413d-a5c9-b2061168b482"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01019"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00174"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fuc__L"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:2181"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/17106"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM40586"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM659"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H11N2O12P2" hasOnlySubstanceUnits="true" id="M_m03106g" initialConcentration="0" metaid="_00d6b0f7-372e-4bcd-b4e4-734060396c74" name="UDP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00015</p> + <p>hmdb: HMDB00295</p> + <p>bigg.metabolite: udp</p> + <p>chebi: CHEBI:17659</p> + <p>pubchem.compound: 6031</p> + <p>metanetx.chemical: MNXM17</p> + <p>formula: C9H11N2O12P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00d6b0f7-372e-4bcd-b4e4-734060396c74"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00015"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00295"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17659"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6031"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01910s" initialConcentration="0" metaid="_3719fc9b-15c2-48f2-af95-91380ed8985c" name="galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00984</p> + <p>hmdb: HMDB00143</p> + <p>bigg.metabolite: gal</p> + <p>chebi: CHEBI:28061</p> + <p>pubchem.compound: 439357</p> + <p>metanetx.chemical: MNXM112 || MNXM390</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3719fc9b-15c2-48f2-af95-91380ed8985c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00984"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00143"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gal"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28061"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439357"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM112"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM390"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02845r" initialConcentration="0" metaid="c375b7d8-5974-4e81-bae4-6ffd881176d0" name="ribose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00117</p> + <p>bigg.metabolite: r5p</p> + <p>chebi: CHEBI:17797</p> + <p>pubchem.compound: 440101</p> + <p>metanetx.chemical: MNXM116 || MNXM15900</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c375b7d8-5974-4e81-bae4-6ffd881176d0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00117"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/r5p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17797"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/440101"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM116"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM15900"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_m02332l" initialConcentration="0" metaid="_18aca9f4-b145-4984-986a-5b4334761e06" name="lactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00243</p> + <p>hmdb: HMDB00186</p> + <p>bigg.metabolite: lcts</p> + <p>chebi: CHEBI:36219</p> + <p>pubchem.compound: 84571</p> + <p>metanetx.chemical: MNXM362</p> + <p>formula: C12H22O11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_18aca9f4-b145-4984-986a-5b4334761e06"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00243"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00186"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/lcts"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:36219"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/84571"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM362"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O8P" hasOnlySubstanceUnits="true" id="M_m02372c" initialConcentration="0" metaid="d64f4610-d8ec-4669-a9cf-fd3e6e1a7f44" name="L-fucose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C02985</p> + <p>bigg.metabolite: fuc1p__L</p> + <p>chebi: CHEBI:28319</p> + <p>pubchem.compound: 439871</p> + <p>metanetx.chemical: MNXM1727</p> + <p>formula: C6H11O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d64f4610-d8ec-4669-a9cf-fd3e6e1a7f44"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02985"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fuc1p__L"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28319"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439871"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1727"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_m02332g" initialConcentration="0" metaid="f1b8e0f2-028c-4545-a1f4-bf750504814b" name="lactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00243</p> + <p>hmdb: HMDB00186</p> + <p>bigg.metabolite: lcts</p> + <p>chebi: CHEBI:36219</p> + <p>pubchem.compound: 84571</p> + <p>metanetx.chemical: MNXM362</p> + <p>formula: C12H22O11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f1b8e0f2-028c-4545-a1f4-bf750504814b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00243"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00186"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/lcts"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:36219"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/84571"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM362"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="HO4P" hasOnlySubstanceUnits="true" id="M_m02751c" initialConcentration="0" metaid="c289024b-4290-4c49-b993-7aacf17d0e1b" name="Pi" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00009</p> + <p>bigg.metabolite: pi</p> + <p>chebi: CHEBI:18367</p> + <p>pubchem.compound: 1004</p> + <p>metanetx.chemical: MNXM9</p> + <p>formula: HO4P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c289024b-4290-4c49-b993-7aacf17d0e1b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00009"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/pi"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18367"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1004"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H13O10P" hasOnlySubstanceUnits="true" id="M_m02884c" initialConcentration="0" metaid="_3392db14-e8b9-4ab8-9f26-2c9ecda86328" name="sedoheptulose-7-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C05382</p> + <p>bigg.metabolite: s7p</p> + <p>chebi: CHEBI:15721</p> + <p>pubchem.compound: 22833559</p> + <p>metanetx.chemical: MNXM271</p> + <p>formula: C7H13O10P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3392db14-e8b9-4ab8-9f26-2c9ecda86328"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C05382"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/s7p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15721"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833559"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM271"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02844c" initialConcentration="0" metaid="_43c0bdf1-d836-4a9f-921f-2ac7f20fb6bf" name="ribose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00620</p> + <p>bigg.metabolite: r1p</p> + <p>chebi: CHEBI:35425</p> + <p>pubchem.compound: 439236</p> + <p>metanetx.chemical: MNXM295</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_43c0bdf1-d836-4a9f-921f-2ac7f20fb6bf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00620"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/r1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:35425"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439236"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM295"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H9O9P" hasOnlySubstanceUnits="true" id="M_m01961c" initialConcentration="0" metaid="_24aa4d4c-882c-444d-b1e4-8191e7fe20d9" name="glucono-1,5-lactone-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01236</p> + <p>bigg.metabolite: 6pgl</p> + <p>chebi: CHEBI:16938</p> + <p>pubchem.compound: 439452</p> + <p>metanetx.chemical: MNXM429</p> + <p>formula: C6H9O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24aa4d4c-882c-444d-b1e4-8191e7fe20d9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01236"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/6pgl"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16938"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439452"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM429"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01840c" initialConcentration="0" metaid="_96ceef6d-b39c-45dc-a853-bd5aa0e6c22e" name="fructose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C02336</p> + <p>hmdb: HMDB00660</p> + <p>bigg.metabolite: fru</p> + <p>chebi: CHEBI:28645</p> + <p>pubchem.compound: 439709</p> + <p>metanetx.chemical: MNXM175</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96ceef6d-b39c-45dc-a853-bd5aa0e6c22e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02336"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00660"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fru"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28645"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439709"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM175"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="HO7P2" hasOnlySubstanceUnits="true" id="M_m02759c" initialConcentration="0" metaid="_4cb8da7d-c29f-4ff0-92dd-f4180921a1f0" name="PPi" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00013</p> + <p>hmdb: HMDB00250</p> + <p>bigg.metabolite: ppi</p> + <p>chebi: CHEBI:18361</p> + <p>pubchem.compound: 644102</p> + <p>metanetx.chemical: MNXM11</p> + <p>formula: HO7P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4cb8da7d-c29f-4ff0-92dd-f4180921a1f0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00013"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00250"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/ppi"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18361"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/644102"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H5O6P" hasOnlySubstanceUnits="true" id="M_m01690c" initialConcentration="0" metaid="fe9d95be-b2e5-4c74-9c43-983a56005d1e" name="DHAP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00111</p> + <p>bigg.metabolite: dhap</p> + <p>chebi: CHEBI:16108</p> + <p>pubchem.compound: 668</p> + <p>metanetx.chemical: MNXM77</p> + <p>formula: C3H5O6P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fe9d95be-b2e5-4c74-9c43-983a56005d1e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00111"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/dhap"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16108"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/668"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM77"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01322c" initialConcentration="0" metaid="ccf14f47-b931-4970-9c98-96b790907dbc" name="alpha-D-galactose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C03384</p> + <p>bigg.metabolite: gal1p</p> + <p>chebi: CHEBI:17973</p> + <p>pubchem.compound: 123912</p> + <p>metanetx.chemical: MNXM336</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ccf14f47-b931-4970-9c98-96b790907dbc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C03384"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gal1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17973"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/123912"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM336"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O7P" hasOnlySubstanceUnits="true" id="M_m01334c" initialConcentration="0" metaid="d430dc71-00bc-4d61-94b8-202046401905" name="AMP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00020</p> + <p>hmdb: HMDB00045</p> + <p>bigg.metabolite: amp</p> + <p>chebi: CHEBI:16027</p> + <p>pubchem.compound: 6083</p> + <p>metanetx.chemical: MNXM14</p> + <p>formula: C10H12N5O7P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d430dc71-00bc-4d61-94b8-202046401905"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00020"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00045"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/amp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16027"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6083"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O" hasOnlySubstanceUnits="true" id="M_m01249c" initialConcentration="0" metaid="b26172e9-a9bb-418f-90c4-4132af1dada8" name="acetaldehyde" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00084</p> + <p>hmdb: HMDB00990</p> + <p>bigg.metabolite: acald</p> + <p>chebi: CHEBI:15343</p> + <p>pubchem.compound: 177</p> + <p>metanetx.chemical: MNXM75</p> + <p>formula: C2H4O</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b26172e9-a9bb-418f-90c4-4132af1dada8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00084"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00990"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/acald"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15343"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/177"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM75"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H9O9P" hasOnlySubstanceUnits="true" id="M_m01961r" initialConcentration="0" metaid="_3f0abace-5e5b-40c8-b067-d21e4368010d" name="glucono-1,5-lactone-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01236</p> + <p>bigg.metabolite: 6pgl</p> + <p>chebi: CHEBI:16938</p> + <p>pubchem.compound: 439452</p> + <p>metanetx.chemical: MNXM429</p> + <p>formula: C6H9O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3f0abace-5e5b-40c8-b067-d21e4368010d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01236"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/6pgl"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16938"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439452"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM429"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O14P3" hasOnlySubstanceUnits="true" id="M_m02193c" initialConcentration="0" metaid="d86ee995-ab70-4b25-8ecf-739633917441" name="ITP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00081</p> + <p>bigg.metabolite: itp</p> + <p>chebi: CHEBI:16039</p> + <p>pubchem.compound: 8583</p> + <p>metanetx.chemical: MNXM423</p> + <p>formula: C10H11N4O14P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d86ee995-ab70-4b25-8ecf-739633917441"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00081"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/itp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16039"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/8583"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM423"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01840s" initialConcentration="0" metaid="b908e607-79da-478f-9bb1-e4ccd3243f7f" name="fructose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C02336</p> + <p>hmdb: HMDB00660</p> + <p>bigg.metabolite: fru</p> + <p>chebi: CHEBI:28645</p> + <p>pubchem.compound: 439709</p> + <p>metanetx.chemical: MNXM175</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b908e607-79da-478f-9bb1-e4ccd3243f7f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02336"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00660"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fru"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28645"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439709"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM175"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="1" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_m02039g" initialConcentration="0" metaid="_42778420-d51a-415e-8fd5-a1e6dd29336f" name="H+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00080</p> + <p>bigg.metabolite: h</p> + <p>chebi: CHEBI:24636</p> + <p>pubchem.compound: 1038</p> + <p>metanetx.chemical: MNXM1</p> + <p>formula: H</p> + <p>charge: 1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_42778420-d51a-415e-8fd5-a1e6dd29336f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00080"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:24636"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1038"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C7H12O13P2" hasOnlySubstanceUnits="true" id="M_m02883c" initialConcentration="0" metaid="_22c2c43e-d9ef-4b0b-ae59-18c23634ad89" name="sedoheptulose-1,7-bisphosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00447</p> + <p>chebi: CHEBI:17969</p> + <p>pubchem.compound: 164735</p> + <p>metanetx.chemical: MNXM163895 || MNXM1294</p> + <p>formula: C7H12O13P2</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_22c2c43e-d9ef-4b0b-ae59-18c23634ad89"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00447"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17969"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/164735"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM163895"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1294"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H10O10P" hasOnlySubstanceUnits="true" id="M_m01169r" initialConcentration="0" metaid="_7c933ae2-cfcf-4aa9-af8d-bbf16388fed5" name="6-phospho-D-gluconate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00345</p> + <p>hmdb: HMDB01316</p> + <p>bigg.metabolite: 6pgc</p> + <p>chebi: CHEBI:48928</p> + <p>pubchem.compound: 91493</p> + <p>metanetx.chemical: MNXM325</p> + <p>formula: C6H10O10P</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7c933ae2-cfcf-4aa9-af8d-bbf16388fed5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00345"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01316"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/6pgc"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:48928"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/91493"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM325"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_m02843c" initialConcentration="0" metaid="c86562cc-a38d-4105-b709-81e1ed867220" name="ribose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00121</p> + <p>hmdb: HMDB00283</p> + <p>bigg.metabolite: rib__D</p> + <p>chebi: CHEBI:16988</p> + <p>pubchem.compound: 5779</p> + <p>metanetx.chemical: MNXM242</p> + <p>formula: C5H10O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c86562cc-a38d-4105-b709-81e1ed867220"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00121"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00283"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/rib__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16988"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5779"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM242"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01968c" initialConcentration="0" metaid="_370aa63f-8947-4333-9372-c95e0079773c" name="glucose-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00092</p> + <p>bigg.metabolite: g6p</p> + <p>chebi: CHEBI:4170</p> + <p>pubchem.compound: 5958</p> + <p>metanetx.chemical: MNXM160</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_370aa63f-8947-4333-9372-c95e0079773c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00092"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/g6p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4170"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5958"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM160"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="1" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_m02039c" initialConcentration="0" metaid="_455b3b9e-68d4-4ea4-b895-e4ac1cc17c0d" name="H+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00080</p> + <p>bigg.metabolite: h</p> + <p>chebi: CHEBI:24636</p> + <p>pubchem.compound: 1038</p> + <p>metanetx.chemical: MNXM1</p> + <p>formula: H</p> + <p>charge: 1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_455b3b9e-68d4-4ea4-b895-e4ac1cc17c0d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00080"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:24636"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1038"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01968r" initialConcentration="0" metaid="_2245cdf3-b905-4470-896d-c12a111787e7" name="glucose-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00092</p> + <p>bigg.metabolite: g6p</p> + <p>chebi: CHEBI:4170</p> + <p>pubchem.compound: 5958</p> + <p>metanetx.chemical: MNXM160</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2245cdf3-b905-4470-896d-c12a111787e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00092"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/g6p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4170"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5958"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM160"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H10O10P" hasOnlySubstanceUnits="true" id="M_m01169c" initialConcentration="0" metaid="dfbe4e2b-1fd6-4a34-8064-53308f79888f" name="6-phospho-D-gluconate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00345</p> + <p>hmdb: HMDB01316</p> + <p>bigg.metabolite: 6pgc</p> + <p>chebi: CHEBI:48928</p> + <p>pubchem.compound: 91493</p> + <p>metanetx.chemical: MNXM325</p> + <p>formula: C6H10O10P</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dfbe4e2b-1fd6-4a34-8064-53308f79888f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00345"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01316"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/6pgc"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:48928"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/91493"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM325"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="1" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_m02039r" initialConcentration="0" metaid="a7079a2e-7f55-44c1-bcc2-5989ea949235" name="H+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00080</p> + <p>bigg.metabolite: h</p> + <p>chebi: CHEBI:24636</p> + <p>pubchem.compound: 1038</p> + <p>metanetx.chemical: MNXM1</p> + <p>formula: H</p> + <p>charge: 1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a7079a2e-7f55-44c1-bcc2-5989ea949235"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00080"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:24636"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1038"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="1" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_m02039s" initialConcentration="0" metaid="_48b7ef43-d087-4f37-9392-1047b65c4dbd" name="H+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00080</p> + <p>bigg.metabolite: h</p> + <p>chebi: CHEBI:24636</p> + <p>pubchem.compound: 1038</p> + <p>metanetx.chemical: MNXM1</p> + <p>formula: H</p> + <p>charge: 1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_48b7ef43-d087-4f37-9392-1047b65c4dbd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00080"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:24636"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1038"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H5O6P" hasOnlySubstanceUnits="true" id="M_m01939c" initialConcentration="0" metaid="_6e928c86-cb07-4ee4-9da1-206e92aa5aae" name="GAP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00118</p> + <p>bigg.metabolite: g3p</p> + <p>chebi: CHEBI:29052</p> + <p>pubchem.compound: 729</p> + <p>metanetx.chemical: MNXM74</p> + <p>formula: C3H5O6P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6e928c86-cb07-4ee4-9da1-206e92aa5aae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00118"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/g3p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:29052"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/729"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM74"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C21H26N7O17P3" hasOnlySubstanceUnits="true" id="M_m02555c" initialConcentration="0" metaid="_4713da60-2315-4728-8c49-9d80e9d06982" name="NADPH" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00005</p> + <p>hmdb: HMDB00221</p> + <p>bigg.metabolite: nadph</p> + <p>chebi: CHEBI:16474</p> + <p>pubchem.compound: 22833512</p> + <p>metanetx.chemical: MNXM6</p> + <p>formula: C21H26N7O17P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4713da60-2315-4728-8c49-9d80e9d06982"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00005"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00221"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadph"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16474"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833512"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01967c" initialConcentration="0" metaid="eb903c59-35de-4770-9346-d9840ea78b8b" name="glucose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00103</p> + <p>bigg.metabolite: g1p</p> + <p>chebi: CHEBI:16077</p> + <p>pubchem.compound: 65533</p> + <p>metanetx.chemical: MNXM89588</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eb903c59-35de-4770-9346-d9840ea78b8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00103"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/g1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16077"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/65533"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89588"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O4" hasOnlySubstanceUnits="true" id="M_m01672c" initialConcentration="0" metaid="c684250e-c857-4d7b-b61e-1695a0a407a8" name="deoxyribose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01801</p> + <p>hmdb: HMDB03224</p> + <p>bigg.metabolite: drib</p> + <p>chebi: CHEBI:28816</p> + <p>pubchem.compound: 22833604</p> + <p>metanetx.chemical: MNXM90412 || MNXM2474</p> + <p>formula: C5H10O4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c684250e-c857-4d7b-b61e-1695a0a407a8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01801"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB03224"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/drib"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28816"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833604"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM90412"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2474"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-4" fbc:chemicalFormula="C21H26N7O17P3" hasOnlySubstanceUnits="true" id="M_m02555r" initialConcentration="0" metaid="_9dd9e24d-3d87-43d4-a57f-7319fda9d5ae" name="NADPH" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00005</p> + <p>hmdb: HMDB00221</p> + <p>bigg.metabolite: nadph</p> + <p>chebi: CHEBI:16474</p> + <p>pubchem.compound: 22833512</p> + <p>metanetx.chemical: MNXM6</p> + <p>formula: C21H26N7O17P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9dd9e24d-3d87-43d4-a57f-7319fda9d5ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00005"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00221"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadph"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16474"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833512"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O3" hasOnlySubstanceUnits="true" id="M_m01983s" initialConcentration="0" metaid="_681859d4-f24a-406f-8efe-f13934d5ffd5" name="glycerol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00116</p> + <p>hmdb: HMDB00131</p> + <p>bigg.metabolite: glyc</p> + <p>chebi: CHEBI:17522</p> + <p>pubchem.compound: 753</p> + <p>metanetx.chemical: MNXM89612</p> + <p>formula: C3H8O3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_681859d4-f24a-406f-8efe-f13934d5ffd5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00116"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00131"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glyc"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17522"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/753"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89612"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C21H25N7O17P3" hasOnlySubstanceUnits="true" id="M_m02554c" initialConcentration="0" metaid="_9d6ff91d-ad3d-4e8d-9c4a-fce47e8acd53" name="NADP+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00006</p> + <p>hmdb: HMDB00217</p> + <p>bigg.metabolite: nadp</p> + <p>chebi: CHEBI:18009</p> + <p>pubchem.compound: 5886</p> + <p>metanetx.chemical: MNXM5</p> + <p>formula: C21H25N7O17P3</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d6ff91d-ad3d-4e8d-9c4a-fce47e8acd53"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00006"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00217"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18009"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5886"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H12O5" hasOnlySubstanceUnits="true" id="M_m02841c" initialConcentration="0" metaid="eb784776-6b61-4d67-9441-2af7f5d1e57f" name="ribitol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00474</p> + <p>hmdb: HMDB00508</p> + <p>bigg.metabolite: rbt</p> + <p>chebi: CHEBI:15963</p> + <p>pubchem.compound: 827</p> + <p>metanetx.chemical: MNXM1820</p> + <p>formula: C5H12O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eb784776-6b61-4d67-9441-2af7f5d1e57f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00474"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00508"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/rbt"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15963"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/827"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1820"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01845c" initialConcentration="0" metaid="_435773db-71ea-408f-b0f1-852fadf7ea80" name="fructose-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00085</p> + <p>bigg.metabolite: f6p</p> + <p>chebi: CHEBI:15946</p> + <p>pubchem.compound: 69507</p> + <p>metanetx.chemical: MNXM89621 || MNXM162235</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_435773db-71ea-408f-b0f1-852fadf7ea80"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00085"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/f6p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15946"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/69507"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89621"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM162235"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040s" initialConcentration="0" metaid="edc2812f-d50e-40df-9c9b-c62283dd5dfa" name="H2O" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>lipidmaps: LMST01040128</p> + <p>kegg.compound: C00001</p> + <p>hmdb: HMDB02111</p> + <p>bigg.metabolite: h2o</p> + <p>chebi: CHEBI:15377</p> + <p>pubchem.compound: 962</p> + <p>metanetx.chemical: MNXM2</p> + <p>formula: H2O</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#edc2812f-d50e-40df-9c9b-c62283dd5dfa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H11N2O15P3" hasOnlySubstanceUnits="true" id="M_m03130c" initialConcentration="0" metaid="_623bdee5-7e3f-429d-8798-39cae174c79d" name="UTP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00075</p> + <p>hmdb: HMDB00285</p> + <p>bigg.metabolite: utp</p> + <p>chebi: CHEBI:15713</p> + <p>pubchem.compound: 6133</p> + <p>metanetx.chemical: MNXM121</p> + <p>formula: C9H11N2O15P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_623bdee5-7e3f-429d-8798-39cae174c79d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00075"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00285"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/utp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15713"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6133"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM121"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H13O10P" hasOnlySubstanceUnits="true" id="M_m03166c" initialConcentration="0" metaid="be62933b-1dd6-4a8b-87c9-a14eb36e9b49" name="sedoheptulose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C06222</p> + <p>chebi: CHEBI:9082</p> + <p>metanetx.chemical: MNXM12925</p> + <p>formula: C7H13O10P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#be62933b-1dd6-4a8b-87c9-a14eb36e9b49"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C06222"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:9082"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM12925"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H11O7" hasOnlySubstanceUnits="true" id="M_m01683c" initialConcentration="0" metaid="_7e64183c-bff4-44e2-bdb9-41d69f6bed98" name="D-gluconic acid" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00257</p> + <p>hmdb: HMDB00625</p> + <p>chebi: CHEBI:33198</p> + <p>pubchem.compound: 10690</p> + <p>metanetx.chemical: MNXM341</p> + <p>formula: C6H11O7</p> + <p>charge: -1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7e64183c-bff4-44e2-bdb9-41d69f6bed98"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00257"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00625"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:33198"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/10690"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM341"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040r" initialConcentration="0" metaid="e3ae9f2d-61b6-4fc2-b932-c251c833a03e" name="H2O" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>lipidmaps: LMST01040128</p> + <p>kegg.compound: C00001</p> + <p>hmdb: HMDB02111</p> + <p>bigg.metabolite: h2o</p> + <p>chebi: CHEBI:15377</p> + <p>pubchem.compound: 962</p> + <p>metanetx.chemical: MNXM2</p> + <p>formula: H2O</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e3ae9f2d-61b6-4fc2-b932-c251c833a03e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-3" fbc:chemicalFormula="C21H25N7O17P3" hasOnlySubstanceUnits="true" id="M_m02554r" initialConcentration="0" metaid="_2dffc121-cbfa-4ef2-bf72-85b96310b284" name="NADP+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00006</p> + <p>hmdb: HMDB00217</p> + <p>bigg.metabolite: nadp</p> + <p>chebi: CHEBI:18009</p> + <p>pubchem.compound: 5886</p> + <p>metanetx.chemical: MNXM5</p> + <p>formula: C21H25N7O17P3</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2dffc121-cbfa-4ef2-bf72-85b96310b284"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00006"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00217"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18009"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5886"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O7P" hasOnlySubstanceUnits="true" id="M_m00640c" initialConcentration="0" metaid="_646e6e22-6191-458f-b8cb-359247dfbf5f" name="2-deoxy-D-ribose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00673</p> + <p>bigg.metabolite: 2dr5p</p> + <p>chebi: CHEBI:16132</p> + <p>pubchem.compound: 45934311</p> + <p>metanetx.chemical: MNXM2179</p> + <p>formula: C5H9O7P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_646e6e22-6191-458f-b8cb-359247dfbf5f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00673"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/2dr5p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16132"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/45934311"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2179"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + </listOfSpecies> + <listOfParameters> + <parameter constant="true" id="UPPER_BOUND_1000_0" units="mmol_per_gDW_per_hr" value="1000"/> + <parameter constant="true" id="LOWER_BOUND_1000_0" units="mmol_per_gDW_per_hr" value="-1000"/> + <parameter constant="true" id="LOWER_BOUND_0_0" units="mmol_per_gDW_per_hr" value="0"/> + </listOfParameters> + <listOfReactions> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4831" metaid="a3b700c3-d335-4df3-bb92-f8fc04db5f3d" name="R_HMR_4831" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 1.1.99.13</p> + <p>metanetx.reaction: MNXR107115</p> + <p>kegg.reaction: R01680</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 1.1.99.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a3b700c3-d335-4df3-bb92-f8fc04db5f3d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.99.13"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107115"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01680"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_m02552s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02332s" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02553s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m00812s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039s" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4710" metaid="e6a0e367-66fa-4310-a86d-7dde3669eac3" name="R_HMR_4710" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:3023765</p> + <p>ec-code: 5.4.2.7</p> + <p>metanetx.reaction: MNXR103116</p> + <p>kegg.reaction: R02749</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.4.2.7</p> + <p>pmids: 3023765</p> + <p>GENE_ASSOCIATION: ( ENSG00000169299 ) OR ( ENSG00000180953 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e6a0e367-66fa-4310-a86d-7dde3669eac3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.7"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103116"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02749"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3023765"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000169299"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000180953"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m00639c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m00640c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4832" metaid="_0a972dea-1cbc-4140-9dc6-ed7934752c06" name="R_HMR_4832" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:3109378;UNIPROT:P16278</p> + <p>ec-code: 3.2.1.23</p> + <p>metanetx.reaction: MNXR109113 || MNXR105374</p> + <p>kegg.reaction: R04783</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 3.2.1.23</p> + <p>pmids: 3109378</p> + <p>GENE_ASSOCIATION: ENSG00000115850 AND ENSG00000163521 AND ENSG00000170266 AND ENSG00000188167</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0a972dea-1cbc-4140-9dc6-ed7934752c06"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.23"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR109113"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105374"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R04783"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3109378"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="ENSG00000170266"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000163521"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000188167"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000115850"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m00810s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01965s" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m00812s" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4315" metaid="_47e92709-8d94-4b33-a876-2890e1758a66" name="R_HMR_4315" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 1.1.1.14</p> + <p>metanetx.reaction: MNXR104283</p> + <p>kegg.reaction: R00875</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 1.1.1.14</p> + <p>GENE_ASSOCIATION: ENSG00000140263</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_47e92709-8d94-4b33-a876-2890e1758a66"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.14"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104283"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00875"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000140263"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4316" metaid="dc10854d-832c-4e85-a025-26973915eb3c" name="R_HMR_4316" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 1.1.1.21</p> + <p>metanetx.reaction: MNXR104287</p> + <p>kegg.reaction: R01787</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 1.1.1.21</p> + <p>GENE_ASSOCIATION: ( ENSG00000085662 ) OR ( ENSG00000198074 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dc10854d-832c-4e85-a025-26973915eb3c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.21"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104287"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01787"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000198074"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000085662"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01965c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4317" metaid="_36d1db72-1f57-4631-aff2-71a5a6395889" name="R_HMR_4317" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:2211634</p> + <p>ec-code: 2.7.1.-</p> + <p>metanetx.reaction: MNXR103725</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.-</p> + <p>pmids: 2211634</p> + <p>GENE_ASSOCIATION: ( ENSG00000116199 ) OR ( ENSG00000141560 ) OR ( ENSG00000162408 ) OR ( ENSG00000167363 ) OR ( ENSG00000172456 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_36d1db72-1f57-4631-aff2-71a5a6395889"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.-"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103725"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2211634"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000116199"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141560"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000162408"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000172456"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000167363"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02917c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4318" metaid="_008e8008-7d8f-4404-bca8-d5c7e6a2b321" name="R_HMR_4318" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.-</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.-</p> + <p>GENE_ASSOCIATION: ( ENSG00000116199 ) OR ( ENSG00000141560 ) OR ( ENSG00000162408 ) OR ( ENSG00000167363 ) OR ( ENSG00000172456 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_008e8008-7d8f-4404-bca8-d5c7e6a2b321"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.-"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000116199"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141560"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000162408"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000172456"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000167363"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01844c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_3944" metaid="e3f7be38-4458-4c4b-9e00-ba70676d46ba" name="R_HMR_3944" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:223665;PMID:4433565;PMID:4436332;PMID:6318818;PMID:6320876;PMID:8612650</p> + <p>ec-code: 2.7.7.9</p> + <p>metanetx.reaction: MNXR100022</p> + <p>kegg.reaction: R00289</p> + <p>bigg.reaction: GALUi</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.7.9</p> + <p>pmids: 223665,4433565,4436332,6318818,6320876,8612650</p> + <p>GENE_ASSOCIATION: ENSG00000169764</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e3f7be38-4458-4c4b-9e00-ba70676d46ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.9"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100022"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00289"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALUi"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/223665"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6318818"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8612650"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6320876"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4433565"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4436332"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000169764"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m03130c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01967c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4319" metaid="_45d0d167-05cb-4738-8b64-49f3791a4688" name="R_HMR_4319" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:16906315;PMID:7061426;PMID:7150652;PMID:8717435</p> + <p>ec-code: 2.7.1.1</p> + <p>metanetx.reaction: MNXR100614</p> + <p>kegg.reaction: R00760</p> + <p>bigg.reaction: HEX7</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.1</p> + <p>pmids: 7061426,7150652,8717435,16906315</p> + <p>GENE_ASSOCIATION: ( ENSG00000156510 ) OR ( ENSG00000156515 ) OR ( ENSG00000159399 ) OR ( ENSG00000160883 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_45d0d167-05cb-4738-8b64-49f3791a4688"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100614"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00760"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/HEX7"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7150652"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7061426"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16906315"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8717435"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000159399"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000160883"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156510"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156515"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_RPEc" metaid="_060005cd-e77c-4aec-9a9e-9953a24e631e" name="Ribulose 5-Phosphate 3-Epimerase" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> + <p>ec-code: 5.1.3.1</p> + <p>bigg.reaction: RPEc</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.1.3.1</p> + <p>pmids: 4382012,13575411</p> + <p>GENE_ASSOCIATION: ENSG00000197713</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_060005cd-e77c-4aec-9a9e-9953a24e631e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.1.3.1"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RPEc"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000197713"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02846c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01761c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_GLYPHEHYc" metaid="_841ed12c-3095-4d2d-88c0-b2d51dc181bc" name="Hydrolysis of Glycylphenylalanine" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: most probable reaction. added during gap filling.</p> + <p>metanetx.reaction: MNXR100357</p> + <p>bigg.reaction: GLYPHEHYc</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_841ed12c-3095-4d2d-88c0-b2d51dc181bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100357"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GLYPHEHYc"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_glyphe_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02724c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01986c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8762" metaid="b7a3dbfa-eb0f-42d0-890e-a21c45957a2f" name="R_HMR_8762" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 4.1.2.13</p> + <p>metanetx.reaction: MNXR99466</p> + <p>bigg.reaction: FBP26</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 4.1.2.13</p> + <p>GENE_ASSOCIATION: ( ENSG00000109107 ) OR ( ENSG00000136872 ) OR ( ENSG00000149925 ) OR ( ENSG00000285043 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b7a3dbfa-eb0f-42d0-890e-a21c45957a2f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.13"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99466"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBP26"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000136872"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000149925"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000109107"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000285043"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01690c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_7674" metaid="_3217a74c-f7b4-467b-a857-58e20a23c963" name="R_HMR_7674" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.4.1.22</p> + <p>metanetx.reaction: MNXR105080</p> + <p>kegg.reaction: R00503</p> + <p>bigg.reaction: UGALGTg</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.4.1.22</p> + <p>GENE_ASSOCIATION: ( ENSG00000086062 ) OR ( ENSG00000117411 ) OR ( ENSG00000167531 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3217a74c-f7b4-467b-a857-58e20a23c963"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.4.1.22"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105080"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00503"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/UGALGTg"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000167531"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000086062"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000117411"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01965g" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03107g" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02039g" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03106g" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02332g" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8761" metaid="_9b5f5c01-dd04-4b3e-a91e-008503d581a0" name="R_HMR_8761" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.3</p> + <p>metanetx.reaction: MNXR100938</p> + <p>kegg.reaction: R02927</p> + <p>bigg.reaction: KHK3</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.3</p> + <p>GENE_ASSOCIATION: ENSG00000138030</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b5f5c01-dd04-4b3e-a91e-008503d581a0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100938"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02927"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/KHK3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01745c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4320" metaid="a8abfc18-6328-4a50-8b08-d17a3f28c8b2" name="R_HMR_4320" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10085245</p> + <p>ec-code: 2.7.1.-</p> + <p>metanetx.reaction: MNXR103514</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.-</p> + <p>pmids: 10085245</p> + <p>GENE_ASSOCIATION: ( ENSG00000116199 ) OR ( ENSG00000141560 ) OR ( ENSG00000162408 ) OR ( ENSG00000167363 ) OR ( ENSG00000172456 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a8abfc18-6328-4a50-8b08-d17a3f28c8b2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.-"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103514"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10085245"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000116199"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141560"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000162408"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000172456"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000167363"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01717c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8766" metaid="_67a27b12-ccf1-4623-a972-3aff79c6f80d" name="R_HMR_8766" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 1.1.1.21</p> + <p>metanetx.reaction: MNXR100012</p> + <p>kegg.reaction: R01095</p> + <p>bigg.reaction: GALSIDEtl</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 1.1.1.21</p> + <p>GENE_ASSOCIATION: ( ENSG00000085662 ) OR ( ENSG00000198074 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_67a27b12-ccf1-4623-a972-3aff79c6f80d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.21"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100012"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01095"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALSIDEtl"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000198074"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000085662"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01910c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01909c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8767" metaid="_8b416bb5-ba06-4ea8-a781-6758242e28a2" name="R_HMR_8767" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.7.12</p> + <p>metanetx.reaction: MNXR100027</p> + <p>kegg.reaction: R00502</p> + <p>bigg.reaction: GALt2_2</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.7.12</p> + <p>GENE_ASSOCIATION: ENSG00000213930</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8b416bb5-ba06-4ea8-a781-6758242e28a2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.12"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100027"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00502"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALt2_2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000213930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m03130c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01322c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8764" metaid="_4a18991c-afe6-4ab4-9518-7eea4183c3a8" name="R_HMR_8764" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 3.2.1.108</p> + <p>metanetx.reaction: MNXR101000</p> + <p>kegg.reaction: R06114</p> + <p>bigg.reaction: LACZly</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 3.2.1.108</p> + <p>GENE_ASSOCIATION: ENSG00000115850</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a18991c-afe6-4ab4-9518-7eea4183c3a8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.108"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101000"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R06114"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/LACZly"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000115850"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040l" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02332l" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01910l" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01965l" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4400" metaid="_24e2c246-dc4f-43cb-b817-8363e45ca0f0" name="R_HMR_4400" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10410995;PMID:2428310;PMID:9603974</p> + <p>ec-code: 1.1.1.271</p> + <p>metanetx.reaction: MNXR100108 || MNXR105384</p> + <p>kegg.reaction: R05692</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 1.1.1.271</p> + <p>pmids: 2428310,9603974,10410995</p> + <p>GENE_ASSOCIATION: ENSG00000104522</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24e2c246-dc4f-43cb-b817-8363e45ca0f0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.271"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100108"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105384"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R05692"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2428310"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9603974"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10410995"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000104522"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01949c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01950c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4565" metaid="dc55ec50-f182-42db-834f-d0cf1b380879" name="R_HMR_4565" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:8549825;UNIPROT:P37837</p> + <p>ec-code: 2.2.1.2</p> + <p>metanetx.reaction: MNXR104715</p> + <p>kegg.reaction: R08575</p> + <p>bigg.reaction: TALA</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.2.1.2</p> + <p>pmids: 8549825</p> + <p>GENE_ASSOCIATION: ENSG00000177156</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dc55ec50-f182-42db-834f-d0cf1b380879"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.2.1.2"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104715"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R08575"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TALA"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8549825"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000177156"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01785c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4841" metaid="f74d8639-e4ff-4f06-b6de-2c4de6cff989" name="R_HMR_4841" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:15234337</p> + <p>ec-code: 1.2.1.5</p> + <p>metanetx.reaction: MNXR105388</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.2.1.5</p> + <p>pmids: 15234337</p> + <p>GENE_ASSOCIATION: ( ENSG00000006534 ) OR ( ENSG00000108602 ) OR ( ENSG00000132746 ) OR ( ENSG00000184254 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f74d8639-e4ff-4f06-b6de-2c4de6cff989"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.2.1.5"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105388"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000108602"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000132746"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000184254"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000006534"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02843c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02841c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4401" metaid="_784dbb17-65c3-4806-8d58-6101b6f50cb1" name="R_HMR_4401" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:5646162;PMID:6251080</p> + <p>ec-code: 2.7.7.30</p> + <p>metanetx.reaction: MNXR99061</p> + <p>kegg.reaction: R01951</p> + <p>bigg.reaction: F1PGT</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.7.30</p> + <p>pmids: 5646162,6251080</p> + <p>GENE_ASSOCIATION: ( ENSG00000116783 ) OR ( ENSG00000254685 ) OR ( ENSG00000259030 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_784dbb17-65c3-4806-8d58-6101b6f50cb1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.30"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99061"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01951"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/F1PGT"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5646162"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6251080"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000116783"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000254685"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000259030"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01950c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02034c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02372c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_RE1342C" metaid="_35970be8-355d-4991-bcbd-bf773e56c260" name="Aldehyde Reductase" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:9537432</p> + <p>ec-code: 1.1.1.21</p> + <p>metanetx.reaction: MNXR103511</p> + <p>bigg.reaction: RE1342C</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 1.1.1.21</p> + <p>pmids: 9537432</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_35970be8-355d-4991-bcbd-bf773e56c260"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.21"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103511"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RE1342C"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9537432"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01965c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4402" metaid="f3a0a958-fed9-477e-ae39-8cdedad1f5bc" name="R_HMR_4402" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:12056818;PMID:12413479</p> + <p>ec-code: 2.7.1.52</p> + <p>metanetx.reaction: MNXR99595 || MNXR107992</p> + <p>kegg.reaction: R03161</p> + <p>bigg.reaction: FK</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.52</p> + <p>pmids: 12056818,12413479</p> + <p>GENE_ASSOCIATION: ENSG00000157353</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f3a0a958-fed9-477e-ae39-8cdedad1f5bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.52"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99595"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107992"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03161"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FK"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12056818"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12413479"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000157353"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01159c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02372c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4567" metaid="_9ff90316-748a-4f8a-91f7-86e61fbd681e" name="R_HMR_4567" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:4084320;PMID:4272358</p> + <p>ec-code: 2.7.1.11</p> + <p>metanetx.reaction: MNXR105338 || MNXR102510</p> + <p>kegg.reaction: R01843</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.11</p> + <p>pmids: 4084320,4272358</p> + <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ff90316-748a-4f8a-91f7-86e61fbd681e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105338"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102510"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01843"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4272358"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4084320"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02883c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4403" metaid="_41178734-fe7b-47f2-b84a-e69e20728adb" name="R_HMR_4403" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:457669;PMID:5050937</p> + <p>ec-code: 5.3.1.25</p> + <p>metanetx.reaction: MNXR99468 || MNXR107994</p> + <p>kegg.reaction: R03163</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 5.3.1.25</p> + <p>pmids: 457669,5050937</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_41178734-fe7b-47f2-b84a-e69e20728adb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.25"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99468"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107994"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03163"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/457669"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5050937"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_m01159c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02373c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4568" metaid="_414cb744-0f0d-4837-b547-ca5fc7b2529a" name="R_HMR_4568" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:11945275</p> + <p>ec-code: 2.7.1.11</p> + <p>metanetx.reaction: MNXR105339</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.11</p> + <p>pmids: 11945275</p> + <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_414cb744-0f0d-4837-b547-ca5fc7b2529a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105339"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/11945275"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m03106c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02883c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03130c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4128" metaid="_093ee677-4ba5-4528-856e-60f371fedfe8" name="R_HMR_4128" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:191453;PMID:845161</p> + <p>ec-code: 5.1.3.2</p> + <p>metanetx.reaction: MNXR105057</p> + <p>kegg.reaction: R00291</p> + <p>bigg.reaction: UDPG4E</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 5.1.3.2</p> + <p>pmids: 191453,845161</p> + <p>GENE_ASSOCIATION: ENSG00000117308</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_093ee677-4ba5-4528-856e-60f371fedfe8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.1.3.2"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105057"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00291"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/UDPG4E"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/845161"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/191453"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000117308"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8768" metaid="_8bcb4fd6-2dbe-4ec7-a1ff-10766373c9c1" name="R_HMR_8768" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 1.1.1.271</p> + <p>metanetx.reaction: MNXR100108</p> + <p>kegg.reaction: R05692</p> + <p>bigg.reaction: GFUCS</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 1.1.1.271</p> + <p>GENE_ASSOCIATION: ENSG00000104522</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8bcb4fd6-2dbe-4ec7-a1ff-10766373c9c1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.271"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100108"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R05692"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GFUCS"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000104522"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01949c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01950c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4404" metaid="_53153327-0fb7-4573-bd62-024a6dbd9d90" name="R_HMR_4404" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:234468;PMID:2495942;PMID:2843500;PMID:3089282;PMID:5141430;PMID:7115375;PMID:7154948;PMID:9924800</p> + <p>ec-code: 2.2.1.1</p> + <p>metanetx.reaction: MNXR104869 || MNXR106812</p> + <p>kegg.reaction: R01067</p> + <p>bigg.reaction: TKT2</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.2.1.1</p> + <p>pmids: 234468,2495942,2843500,3089282,5141430,7115375,7154948,9924800</p> + <p>GENE_ASSOCIATION: ( ENSG00000007350 ) OR ( ENSG00000151005 ) OR ( ENSG00000163931 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_53153327-0fb7-4573-bd62-024a6dbd9d90"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.2.1.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104869"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106812"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01067"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TKT2"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2495942"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7115375"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/234468"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9924800"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5141430"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7154948"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3089282"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000163931"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000007350"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000151005"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01761c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01785c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4490" metaid="f0088831-0d71-400f-b3b3-78d25c47e1f4" name="R_HMR_4490" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:16906315;PMID:7061426;PMID:7150652;PMID:8717435</p> + <p>ec-code: 2.7.1.1</p> + <p>metanetx.reaction: MNXR95795</p> + <p>kegg.reaction: R01326</p> + <p>bigg.reaction: HEX4</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.1</p> + <p>pmids: 7061426,7150652,8717435,16906315</p> + <p>GENE_ASSOCIATION: ( ENSG00000156510 ) OR ( ENSG00000156515 ) OR ( ENSG00000159399 ) OR ( ENSG00000160883 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f0088831-0d71-400f-b3b3-78d25c47e1f4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR95795"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01326"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/HEX4"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7150652"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7061426"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16906315"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8717435"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000159399"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000160883"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156510"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156515"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02453c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02455c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4052" metaid="f3773fb2-a697-4ad0-b9c8-70f626e44da0" name="R_HMR_4052" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:11101685;PMID:7572345</p> + <p>ec-code: 2.7.6.1</p> + <p>metanetx.reaction: MNXR106802 || MNXR103215</p> + <p>kegg.reaction: R01049</p> + <p>bigg.reaction: PRPPS</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.6.1</p> + <p>pmids: 7572345,11101685</p> + <p>GENE_ASSOCIATION: ( ENSG00000101911 ) OR ( ENSG00000147224 ) OR ( ENSG00000229937 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f3773fb2-a697-4ad0-b9c8-70f626e44da0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.6.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106802"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103215"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01049"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PRPPS"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7572345"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/11101685"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000147224"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000229937"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000101911"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01334c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02806c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4130" metaid="a1e6f11c-2c01-45d7-aa41-39764568a681" name="R_HMR_4130" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.6</p> + <p>metanetx.reaction: MNXR99985</p> + <p>bigg.reaction: GALKr</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.6</p> + <p>GENE_ASSOCIATION: ( ENSG00000108479 ) OR ( ENSG00000156958 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a1e6f11c-2c01-45d7-aa41-39764568a681"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.6"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99985"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALKr"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000108479"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156958"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01910c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01322c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8653" metaid="_22f2d06f-d7c0-4287-a929-46293b17c7af" name="R_HMR_8653" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 3.1.1.31</p> + <p>metanetx.reaction: MNXR99907</p> + <p>kegg.reaction: R10520</p> + <p>bigg.reaction: G6PDH2r</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 3.1.1.31</p> + <p>GENE_ASSOCIATION: ( ENSG00000049239 ) OR ( ENSG00000130313 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_22f2d06f-d7c0-4287-a929-46293b17c7af"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99907"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R10520"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2r"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000049239"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01961r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02553r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039r" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01968r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02552r" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4131" metaid="fba7f9cd-fa2b-4c7a-a4a5-02318cc57a68" name="R_HMR_4131" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.7.12</p> + <p>metanetx.reaction: MNXR105090</p> + <p>kegg.reaction: R00955</p> + <p>bigg.reaction: UGLT</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.7.12</p> + <p>GENE_ASSOCIATION: ENSG00000213930</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fba7f9cd-fa2b-4c7a-a4a5-02318cc57a68"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.12"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105090"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00955"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/UGLT"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000213930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01967c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01322c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4297" metaid="c5cf5503-7811-4ea5-b3d5-159879fdbf6a" name="R_HMR_4297" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:7506254;PMID:7688733</p> + <p>ec-code: 2.7.1.105</p> + <p>metanetx.reaction: MNXR102508</p> + <p>kegg.reaction: R00757</p> + <p>bigg.reaction: PFK26</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.105</p> + <p>pmids: 7506254,7688733</p> + <p>GENE_ASSOCIATION: ( ENSG00000114268 ) OR ( ENSG00000123836 ) OR ( ENSG00000158571 ) OR ( ENSG00000170525 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5cf5503-7811-4ea5-b3d5-159879fdbf6a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.105"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102508"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00757"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PFK26"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7688733"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7506254"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000123836"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000170525"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000114268"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000158571"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01843c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4132" metaid="_7fd1e0ad-5113-42aa-963e-6215ef481843" name="R_HMR_4132" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10993714</p> + <p>ec-code: 2.7.7.12</p> + <p>metanetx.reaction: MNXR105090</p> + <p>kegg.reaction: R00955</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.7.12</p> + <p>pmids: 10993714</p> + <p>GENE_ASSOCIATION: ENSG00000213930</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7fd1e0ad-5113-42aa-963e-6215ef481843"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.12"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105090"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00955"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10993714"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000213930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01911c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01967c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_0454" metaid="c76ba226-384c-4b57-84b2-6140f038c756" name="R_HMR_0454" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:12125098</p> + <p>ec-code: 2.7.1.28</p> + <p>metanetx.reaction: MNXR104940</p> + <p>kegg.reaction: R01059</p> + <p>bigg.reaction: TRIOK</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.28</p> + <p>pmids: 12125098</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c76ba226-384c-4b57-84b2-6140f038c756"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.28"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104940"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01059"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TRIOK"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12125098"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4774" metaid="_3d04496d-3c88-44ef-a0f4-1566551ef2a7" name="R_HMR_4774" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:131802;PMID:1810251;PMID:193556;PMID:2987258;PMID:6091737</p> + <p>ec-code: 2.7.1.11</p> + <p>metanetx.reaction: MNXR108039 || MNXR105355</p> + <p>kegg.reaction: R03237</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.11</p> + <p>pmids: 131802,193556,1810251,2987258,6091737</p> + <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d04496d-3c88-44ef-a0f4-1566551ef2a7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR108039"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105355"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03237"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/1810251"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6091737"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/193556"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2987258"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/131802"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01424c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02955c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01623c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4775" metaid="b71ca27b-2233-4904-bf68-12c5c97c9300" name="R_HMR_4775" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:131802;PMID:1810251</p> + <p>ec-code: 2.7.1.11</p> + <p>metanetx.reaction: MNXR105356 || MNXR108041</p> + <p>kegg.reaction: R03239</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.11</p> + <p>pmids: 131802,1810251</p> + <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b71ca27b-2233-4904-bf68-12c5c97c9300"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105356"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR108041"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03239"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/1810251"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/131802"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02193c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02161c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02955c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4414" metaid="b4722a38-261b-454e-93b5-c84c4aa10035" name="R_HMR_4414" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:8908517</p> + <p>ec-code: 2.7.1.6</p> + <p>metanetx.reaction: MNXR99985</p> + <p>kegg.reaction: R01092</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.6</p> + <p>pmids: 8908517</p> + <p>GENE_ASSOCIATION: ( ENSG00000108479 ) OR ( ENSG00000156958 ) OR ( ENSG00000166262 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b4722a38-261b-454e-93b5-c84c4aa10035"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.6"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99985"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01092"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8908517"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000108479"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156958"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000166262"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01910c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01911c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4415" metaid="_0e1118fe-ec5c-4f40-b7ba-0a043f91a0d0" name="R_HMR_4415" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:6786877</p> + <p>ec-code: 3.2.1.108 || 3.2.1.23</p> + <p>metanetx.reaction: MNXR101000</p> + <p>kegg.reaction: R01100</p> + <p>bigg.reaction: LACZe</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 3.2.1.23;3.2.1.108</p> + <p>pmids: 6786877</p> + <p>GENE_ASSOCIATION: ENSG00000115850 AND ENSG00000163521 AND ENSG00000170266 AND ENSG00000188167</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0e1118fe-ec5c-4f40-b7ba-0a043f91a0d0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.108"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.23"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101000"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01100"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/LACZe"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6786877"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="ENSG00000170266"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000163521"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000188167"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000115850"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02332s" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01910s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01965s" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4416" metaid="b1a0bbd3-03c8-481d-87b1-808aebb90ef2" name="R_HMR_4416" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:3569296</p> + <p>ec-code: 3.2.1.23 || 3.2.1.22</p> + <p>metanetx.reaction: MNXR100115</p> + <p>kegg.reaction: R01104</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 3.2.1.22;3.2.1.23</p> + <p>pmids: 3569296</p> + <p>GENE_ASSOCIATION: ( ENSG00000102393 ) OR ( ENSG00000170266 ) OR ( ENSG00000241343 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b1a0bbd3-03c8-481d-87b1-808aebb90ef2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.23"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.22"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100115"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01104"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3569296"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000102393"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000170266"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000241343"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01913s" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01910s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01983s" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_FBA5" metaid="f429561f-98d2-434a-860a-ddff29f21ebd" name="D-Tagatose 1-Phosphate D-Glyceraldehyde-3-Phosphate-Lyase" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:2996495,PMID:6284103,PMID:6298387</p> + <p>ec-code: 4.1.2.13</p> + <p>metanetx.reaction: MNXR99463</p> + <p>bigg.reaction: FBA5</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 4.1.2.13</p> + <p>pmids: 2996495,6284103,6298387</p> + <p>GENE_ASSOCIATION: ENSG00000136872</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f429561f-98d2-434a-860a-ddff29f21ebd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.13"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99463"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBA5"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2996495"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6298387"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6284103"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000136872"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tag1p_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01690c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_PGLc" metaid="_3648fd3f-6668-495c-b2e0-e7ce9105a0bd" name="6-Phosphogluconolactonase" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> + <p>ec-code: 3.1.1.31</p> + <p>bigg.reaction: PGLc</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 3.1.1.31</p> + <p>pmids: 4382012,13575411</p> + <p>GENE_ASSOCIATION: ENSG00000130313</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3648fd3f-6668-495c-b2e0-e7ce9105a0bd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PGLc"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m01961c" stoichiometry="3"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01169c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4383" metaid="_0ea26d9f-b8bd-4193-8626-31efb5856906" name="R_HMR_4383" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10571009;PMID:12231825;PMID:15033941;PMID:2085314;PMID:7702210;PMID:8381960</p> + <p>ec-code: 5.3.1.8</p> + <p>metanetx.reaction: MNXR106679 || MNXR101382</p> + <p>kegg.reaction: R00772</p> + <p>bigg.reaction: MAN6PI</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 5.3.1.8</p> + <p>pmids: 2085314,7702210,8381960,10571009,12231825,15033941</p> + <p>GENE_ASSOCIATION: ENSG00000178802</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ea26d9f-b8bd-4193-8626-31efb5856906"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.8"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106679"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101382"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00772"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/MAN6PI"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10571009"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15033941"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7702210"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8381960"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12231825"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2085314"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000178802"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02455c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_GNDc" metaid="ef163958-45f6-498d-acb0-0e2d72945b19" name="Phosphogluconate Dehydrogenase" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> + <p>ec-code: 1.1.1.44</p> + <p>bigg.reaction: GNDc</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.1.1.44</p> + <p>pmids: 4382012,13575411</p> + <p>GENE_ASSOCIATION: ENSG00000142657</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ef163958-45f6-498d-acb0-0e2d72945b19"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.44"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GNDc"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000142657"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01169c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m02554c" stoichiometry="3"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m01596c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4385" metaid="_83fb9834-0745-47d2-b88f-9cb966a0eefd" name="R_HMR_4385" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10593562;PMID:12889654;PMID:15361947</p> + <p>ec-code: 5.4.2.8</p> + <p>metanetx.reaction: MNXR101729</p> + <p>kegg.reaction: R01818</p> + <p>bigg.reaction: PMANM</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 5.4.2.8</p> + <p>pmids: 10593562,12889654,15361947</p> + <p>GENE_ASSOCIATION: ( ENSG00000100413 ) OR ( ENSG00000100417 ) OR ( ENSG00000140650 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83fb9834-0745-47d2-b88f-9cb966a0eefd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.8"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101729"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01818"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PMANM"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15361947"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12889654"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10593562"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000140650"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000100417"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000100413"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02455c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4386" metaid="_1b139dd2-60dd-4d29-b9db-c7cd0c97d62b" name="R_HMR_4386" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:13876695</p> + <p>ec-code: 2.7.7.13 || 2.7.7.22</p> + <p>metanetx.reaction: MNXR101376</p> + <p>kegg.reaction: R00883</p> + <p>bigg.reaction: MAN1PT2</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.7.22;2.7.7.13</p> + <p>pmids: 13876695</p> + <p>GENE_ASSOCIATION: ( ENSG00000144591 ) OR ( ENSG00000164068 ) OR ( ENSG00000173540 ) OR ( ENSG00000176020 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1b139dd2-60dd-4d29-b9db-c7cd0c97d62b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.13"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.22"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101376"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00883"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/MAN1PT2"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13876695"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000164068"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000176020"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000173540"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000144591"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01948c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01951c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02751c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_ABTD1" metaid="_030d6c02-c016-4e4d-a3a0-100f8b573715" name="L-Arabinitol 4-Dehydrogenase" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID: 16435225</p> + <p>ec-code: 3.1.1.4</p> + <p>bigg.reaction: ABTD1</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 3.1.1.4</p> + <p>pmids: 16435225</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_030d6c02-c016-4e4d-a3a0-100f8b573715"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.4"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/ABTD1"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16435225"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> + <speciesReference constant="true" species="M_abt_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02425c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4387" metaid="_642e9305-23e4-4e3a-b6ef-fe32f9051987" name="R_HMR_4387" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10025667;PMID:8549746;PMID:9451026</p> + <p>ec-code: 2.7.7.13</p> + <p>metanetx.reaction: MNXR101375</p> + <p>kegg.reaction: R00885</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.7.13</p> + <p>pmids: 8549746,9451026,10025667</p> + <p>GENE_ASSOCIATION: ( ENSG00000144591 ) OR ( ENSG00000173540 ) OR ( ENSG00000176020 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_642e9305-23e4-4e3a-b6ef-fe32f9051987"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.13"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101375"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00885"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8549746"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9451026"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10025667"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000176020"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000173540"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000144591"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02034c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01951c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_9799" metaid="_57352ce2-7ff7-4510-8c37-fe046275ab37" name="R_HMR_9799" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.14</p> + <p>metanetx.reaction: MNXR107202</p> + <p>kegg.reaction: R01844</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.14</p> + <p>GENE_ASSOCIATION: ENSG00000197417</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_57352ce2-7ff7-4510-8c37-fe046275ab37"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.14"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107202"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01844"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000197417"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03165c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4303" metaid="_073189d4-50c2-4cf1-b826-23bdb07507f8" name="R_HMR_4303" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:12055199</p> + <p>ec-code: 3.2.1.48 || 3.2.1.10 || 3.2.1.20</p> + <p>metanetx.reaction: MNXR104638</p> + <p>kegg.reaction: R00801</p> + <p>bigg.reaction: SUCRe</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 3.2.1.10;3.2.1.20;3.2.1.48</p> + <p>pmids: 12055199</p> + <p>GENE_ASSOCIATION: ( ENSG00000090402 ) OR ( ENSG00000171298 ) OR ( ENSG00000214013 ) OR ( ENSG00000257335 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_073189d4-50c2-4cf1-b826-23bdb07507f8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.48"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.10"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.20"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104638"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00801"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/SUCRe"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12055199"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000171298"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000257335"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000090402"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000214013"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02945s" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01965s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01840s" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4501" metaid="_94343e1c-c62d-4149-953b-237ef55a08ca" name="R_HMR_4501" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:13385248;PMID:2495942;UNIPROT:P29401</p> + <p>ec-code: 2.2.1.1</p> + <p>metanetx.reaction: MNXR107105 || MNXR104868</p> + <p>kegg.reaction: R01641</p> + <p>bigg.reaction: TKT1</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.2.1.1</p> + <p>pmids: 2495942,13385248</p> + <p>GENE_ASSOCIATION: ( ENSG00000007350 ) OR ( ENSG00000151005 ) OR ( ENSG00000163931 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94343e1c-c62d-4149-953b-237ef55a08ca"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.2.1.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107105"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104868"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01641"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TKT1"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2495942"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13385248"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000163931"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000007350"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000151005"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01761c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4304" metaid="_4a19056f-9291-4536-aee2-1f674e94327c" name="R_HMR_4304" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:15774558;PMID:16756494;PMID:2753047;PMID:4169027</p> + <p>ec-code: 1.1.1.49</p> + <p>metanetx.reaction: MNXR99907</p> + <p>kegg.reaction: R00835</p> + <p>bigg.reaction: G6PDH2er</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.1.1.49</p> + <p>pmids: 2753047,4169027,15774558,16756494</p> + <p>GENE_ASSOCIATION: ENSG00000160211</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a19056f-9291-4536-aee2-1f674e94327c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.49"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99907"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00835"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2er"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4169027"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15774558"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000160211"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01968r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02554r" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01961r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039r" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4623" metaid="_977981ea-549f-4af8-8bc9-8f06a599033d" name="R_HMR_4623" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:3858849;PMID:3932573;PMID:6852020;PMID:971315</p> + <p>ec-code: 3.1.1.31</p> + <p>metanetx.reaction: MNXR102539</p> + <p>kegg.reaction: R02035</p> + <p>bigg.reaction: PGLer</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 3.1.1.31</p> + <p>pmids: 971315,3858849,3932573,6852020</p> + <p>GENE_ASSOCIATION: ( ENSG00000049239 ) OR ( ENSG00000130313 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_977981ea-549f-4af8-8bc9-8f06a599033d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102539"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02035"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PGLer"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3932573"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3858849"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6852020"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/971315"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000049239"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01961r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02040r" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01169r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039r" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4306" metaid="c51de190-dee0-491f-93ed-9eebe9f571ff" name="R_HMR_4306" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:15774558;PMID:16756494;PMID:2753047;PMID:4169027</p> + <p>ec-code: 1.1.1.49</p> + <p>metanetx.reaction: MNXR99907</p> + <p>kegg.reaction: R00835</p> + <p>bigg.reaction: G6PDH2r</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.1.1.49</p> + <p>pmids: 2753047,4169027,15774558,16756494</p> + <p>GENE_ASSOCIATION: ENSG00000160211</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c51de190-dee0-491f-93ed-9eebe9f571ff"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.49"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99907"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00835"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2r"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4169027"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15774558"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000160211"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01961c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01968c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4625" metaid="ce25ac8c-d5cd-45bf-aa0f-b5091cc8f920" name="R_HMR_4625" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:3858849;PMID:3932573;PMID:6852020;PMID:971315</p> + <p>ec-code: 3.1.1.31</p> + <p>metanetx.reaction: MNXR102539</p> + <p>kegg.reaction: R02035</p> + <p>bigg.reaction: PGL</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 3.1.1.31</p> + <p>pmids: 971315,3858849,3932573,6852020</p> + <p>GENE_ASSOCIATION: ( ENSG00000049239 ) OR ( ENSG00000130313 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ce25ac8c-d5cd-45bf-aa0f-b5091cc8f920"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102539"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02035"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PGL"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3932573"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3858849"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6852020"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/971315"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000049239"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01961c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01169c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4706" metaid="_76f44f32-e827-409c-9f89-d39564cf363b" name="R_HMR_4706" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:11245921;PMID:12379646;PMID:15170386;PMID:15581487;PMID:16316985;PMID:2837207</p> + <p>ec-code: 3.1.3.46 || 3.1.3.11</p> + <p>metanetx.reaction: MNXR106671 || MNXR99466</p> + <p>kegg.reaction: R00763</p> + <p>bigg.reaction: FBP26</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 3.1.3.46;3.1.3.11</p> + <p>pmids: 2837207,11245921,12379646,15170386,15581487,16316985</p> + <p>GENE_ASSOCIATION: ( ENSG00000078237 ) OR ( ENSG00000108813 ) OR ( ENSG00000114268 ) OR ( ENSG00000123836 ) OR ( ENSG00000158571 ) OR ( ENSG00000170525 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76f44f32-e827-409c-9f89-d39564cf363b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.3.46"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.3.11"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106671"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99466"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00763"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBP26"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16316985"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12379646"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15581487"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15170386"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/11245921"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2837207"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000123836"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000170525"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000108813"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000158571"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000078237"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000114268"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01843c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02751c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_G6PDH2c" metaid="_65f65765-bf14-48a2-8308-72aa949d0dd7" name="Glucose 6-Phosphate Dehydrogenase" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> + <p>bigg.reaction: G6PDH2c</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>pmids: 4382012,13575411</p> + <p>GENE_ASSOCIATION: ENSG00000160211</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_65f65765-bf14-48a2-8308-72aa949d0dd7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2c"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000160211"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02554c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m01968c" stoichiometry="3"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01961c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8074" metaid="c6249ea1-2eba-44b9-b389-c3bb870070af" name="R_HMR_8074" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.15</p> + <p>metanetx.reaction: MNXR97787</p> + <p>kegg.reaction: R02750</p> + <p>bigg.reaction: DRPA</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.15</p> + <p>GENE_ASSOCIATION: ( ENSG00000158019 ) OR ( ENSG00000171174 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c6249ea1-2eba-44b9-b389-c3bb870070af"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.15"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR97787"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02750"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/DRPA"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000171174"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000158019"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01672c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m00640c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4350" metaid="cd869f58-5452-4226-8cfe-b859d4054a8f" name="R_HMR_4350" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:13295274;PMID:17618002</p> + <p>ec-code: 2.7.1.15</p> + <p>metanetx.reaction: MNXR106804 || MNXR103431</p> + <p>kegg.reaction: R01051</p> + <p>bigg.reaction: RBK</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.15</p> + <p>pmids: 13295274,17618002</p> + <p>GENE_ASSOCIATION: ( ENSG00000158019 ) OR ( ENSG00000171174 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd869f58-5452-4226-8cfe-b859d4054a8f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.15"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106804"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103431"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01051"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RBK"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13295274"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/17618002"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000171174"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000158019"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02843c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_KHK3" metaid="_2f83a279-1e91-4c20-ab35-0fbd94c31885" name="Ketohexokinase (D-Tagatose)" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:2996495,PMID:6284103,PMID:6298387</p> + <p>ec-code: 2.7.1.3</p> + <p>metanetx.reaction: MNXR100938</p> + <p>bigg.reaction: KHK3</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.3</p> + <p>pmids: 2996495,6284103,6298387</p> + <p>GENE_ASSOCIATION: ENSG00000138030</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2f83a279-1e91-4c20-ab35-0fbd94c31885"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100938"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/KHK3"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2996495"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6298387"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6284103"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01745c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tag1p_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4351" metaid="_6bfc4346-8d59-4fd8-af6b-41405b4de8a1" name="R_HMR_4351" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:14690456;PMID:14988808;PMID:15234337;PMID:2843500</p> + <p>ec-code: 5.3.1.6</p> + <p>metanetx.reaction: MNXR104084 || MNXR106809</p> + <p>kegg.reaction: R01056</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.3.1.6</p> + <p>pmids: 2843500,14690456,14988808,15234337</p> + <p>GENE_ASSOCIATION: ENSG00000153574</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6bfc4346-8d59-4fd8-af6b-41405b4de8a1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.6"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104084"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106809"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01056"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/14690456"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/14988808"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000153574"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02845r" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846r" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4473" metaid="c7c1f092-4aea-48a2-8d25-feb3f47ea431" name="R_HMR_4473" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:12398160;PMID:1504088;PMID:15558954;PMID:16756494;PMID:2753047;PMID:3943305;PMID:6212636;PMID:7194116;PMID:7225115;PMID:7623792</p> + <p>ec-code: 1.1.1.44</p> + <p>metanetx.reaction: MNXR100389</p> + <p>kegg.reaction: R01528</p> + <p>bigg.reaction: GNDer</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.1.1.44</p> + <p>pmids: 1504088,2753047,3943305,6212636,7194116,7225115,7623792,12398160,15558954,16756494</p> + <p>GENE_ASSOCIATION: ENSG00000142657</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c7c1f092-4aea-48a2-8d25-feb3f47ea431"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.44"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100389"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01528"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GNDer"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6212636"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7623792"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3943305"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7225115"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15558954"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7194116"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12398160"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/1504088"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000142657"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01169r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02554r" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01596r" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4352" metaid="be77e7e9-9978-4d8f-9533-2dd900d0bde5" name="R_HMR_4352" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:14690456;PMID:14988808;PMID:15234337;PMID:2843500</p> + <p>ec-code: 5.3.1.6</p> + <p>metanetx.reaction: MNXR104084 || MNXR106809</p> + <p>kegg.reaction: R01056</p> + <p>bigg.reaction: RPI</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.3.1.6</p> + <p>pmids: 2843500,14690456,14988808,15234337</p> + <p>GENE_ASSOCIATION: ENSG00000153574</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#be77e7e9-9978-4d8f-9533-2dd900d0bde5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.6"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104084"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106809"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01056"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RPI"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/14690456"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/14988808"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000153574"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4474" metaid="_83d5dfd1-ca06-416b-8f50-068a6b157458" name="R_HMR_4474" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:12398160;PMID:1504088;PMID:15558954;PMID:16756494;PMID:2753047;PMID:3943305;PMID:6212636;PMID:7194116;PMID:7225115;PMID:7623792</p> + <p>ec-code: 1.1.1.44</p> + <p>metanetx.reaction: MNXR100389</p> + <p>kegg.reaction: R01528</p> + <p>bigg.reaction: GND</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.1.1.44</p> + <p>pmids: 1504088,2753047,3943305,6212636,7194116,7225115,7623792,12398160,15558954,16756494</p> + <p>GENE_ASSOCIATION: ENSG00000142657</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83d5dfd1-ca06-416b-8f50-068a6b157458"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.44"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100389"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01528"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GND"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6212636"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7623792"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3943305"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7225115"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15558954"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7194116"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12398160"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/1504088"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000142657"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01169c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01596c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_9800" metaid="_329c99c1-064e-4527-a8da-785581323147" name="R_HMR_9800" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.3</p> + <p>metanetx.reaction: MNXR108451</p> + <p>kegg.reaction: R03819</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.3</p> + <p>GENE_ASSOCIATION: ENSG00000138030</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_329c99c1-064e-4527-a8da-785581323147"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR108451"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03819"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03165c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03166c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4398" metaid="c2e9d022-c156-4c88-a796-2bc148714535" name="R_HMR_4398" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:4989681;PMID:9226884</p> + <p>ec-code: 4.1.2.4</p> + <p>metanetx.reaction: MNXR97787</p> + <p>kegg.reaction: R01066</p> + <p>bigg.reaction: DRPA</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 4.1.2.4</p> + <p>pmids: 4989681,9226884</p> + <p>GENE_ASSOCIATION: ENSG00000023697</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c2e9d022-c156-4c88-a796-2bc148714535"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.4"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR97787"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01066"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/DRPA"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9226884"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4989681"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000023697"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m00640c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01249c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4354" metaid="f7108fb4-b7e5-49a3-ada1-a6024a22b77c" name="R_HMR_4354" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:14953458;PMID:3023765;PMID:5769188;PMID:8050998</p> + <p>ec-code: 5.4.2.2 || 5.4.2.7</p> + <p>metanetx.reaction: MNXR106810 || MNXR103115</p> + <p>kegg.reaction: R01057</p> + <p>bigg.reaction: PPM</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.4.2.2;5.4.2.7</p> + <p>pmids: 3023765,5769188,8050998,14953458</p> + <p>GENE_ASSOCIATION: ( ENSG00000079739 ) OR ( ENSG00000169299 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f7108fb4-b7e5-49a3-ada1-a6024a22b77c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.2"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.7"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106810"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103115"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01057"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PPM"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/14953458"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3023765"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5769188"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8050998"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000169299"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000079739"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02844c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4310" metaid="_9239b4c7-a967-4956-b094-a7de9aff2cba" name="R_HMR_4310" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:2996495;PMID:7833921</p> + <p>ec-code: 2.7.1.3</p> + <p>metanetx.reaction: MNXR100936</p> + <p>kegg.reaction: R00866</p> + <p>bigg.reaction: KHK</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.3</p> + <p>pmids: 2996495,7833921</p> + <p>GENE_ASSOCIATION: ENSG00000138030</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9239b4c7-a967-4956-b094-a7de9aff2cba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100936"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00866"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/KHK"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2996495"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7833921"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01842c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4476" metaid="_9560c25f-9d92-4a3c-bfbb-374877a611c3" name="R_HMR_4476" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10978316</p> + <p>ec-code: 2.3.1.57</p> + <p>metanetx.reaction: MNXR100390</p> + <p>kegg.reaction: R01737</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.3.1.57</p> + <p>pmids: 10978316</p> + <p>GENE_ASSOCIATION: ( ENSG00000130066 ) OR ( ENSG00000141504 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9560c25f-9d92-4a3c-bfbb-374877a611c3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.3.1.57"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100390"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01737"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10978316"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141504"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000130066"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01169c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01683c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4399" metaid="_961e9144-e77b-430b-8dd8-8001acf778ea" name="R_HMR_4399" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:9893952</p> + <p>ec-code: 4.2.1.47</p> + <p>metanetx.reaction: MNXR100377</p> + <p>kegg.reaction: R00888</p> + <p>bigg.reaction: GMAND</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 4.2.1.47</p> + <p>pmids: 9893952</p> + <p>GENE_ASSOCIATION: ENSG00000112699</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_961e9144-e77b-430b-8dd8-8001acf778ea"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/4.2.1.47"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100377"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00888"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GMAND"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9893952"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000112699"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01951c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01949c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4477" metaid="_44d922a9-9c8a-409b-b662-408d43f39b21" name="R_HMR_4477" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:15234337;PMID:234468;PMID:2843500</p> + <p>ec-code: 5.1.3.1</p> + <p>metanetx.reaction: MNXR104083</p> + <p>kegg.reaction: R01529</p> + <p>bigg.reaction: RPE</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.1.3.1</p> + <p>pmids: 234468,2843500,15234337</p> + <p>GENE_ASSOCIATION: ( ENSG00000197713 ) OR ( ENSG00000235376 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_44d922a9-9c8a-409b-b662-408d43f39b21"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.1.3.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104083"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01529"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RPE"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/234468"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000197713"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000235376"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01761c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4356" metaid="e6efa094-5aeb-412c-8390-f6707d0794e0" name="R_HMR_4356" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:5114731;PMID:5655259;PMID:6054986</p> + <p>ec-code: 4.1.2.13</p> + <p>metanetx.reaction: MNXR99460</p> + <p>kegg.reaction: R02568</p> + <p>bigg.reaction: FBA2</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 4.1.2.13</p> + <p>pmids: 5114731,5655259,6054986</p> + <p>GENE_ASSOCIATION: ( ENSG00000109107 ) OR ( ENSG00000136872 ) OR ( ENSG00000149925 ) OR ( ENSG00000285043 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e6efa094-5aeb-412c-8390-f6707d0794e0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.13"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99460"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02568"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBA2"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5114731"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6054986"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5655259"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000136872"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000149925"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000109107"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000285043"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01690c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01842c" stoichiometry="1"/> + </listOfProducts> + </reaction> + </listOfReactions> + </model> +</sbml>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/build/tools/SBMLwizard/test-data/XF_network.sbml Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,47267 @@ +<?xml version="1.0" encoding="UTF-8"?> +<sbml fbc:required="false" groups:required="false" level="3" version="2" xmlns="http://www.sbml.org/sbml/level3/version2/core" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1"> + <model fbc:strict="true" id="Xfm1158" metaid="Xfm1158" name="Xfm1158"> + <fbc:listOfGeneProducts> + <fbc:geneProduct fbc:id="XFCFBP8418_007090" fbc:label="XFCFBP8418_007090" fbc:name="XFCFBP8418_007090" metaid="_8a7d7180-d79e-4dbb-86ed-f8d7eb60e698"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005900" fbc:label="XFCFBP8418_005900" fbc:name="XFCFBP8418_005900" metaid="_867487dd-ff57-4e93-8de9-b5ecb805e0eb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011590" fbc:label="XFCFBP8418_011590" fbc:name="XFCFBP8418_011590" metaid="_44606760-936c-4585-b40c-650e953a5f73"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014620" fbc:label="XFCFBP8418_014620" fbc:name="XFCFBP8418_014620" metaid="da273da9-0f84-4615-a464-2ab71416e8cc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015830" fbc:label="XFCFBP8418_015830" fbc:name="XFCFBP8418_015830" metaid="_3a9239a2-8e23-4834-99a8-a7dc15f6d906"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014980" fbc:label="XFCFBP8418_014980" fbc:name="XFCFBP8418_014980" metaid="_7f26806b-e32e-4c5c-a78d-9e094c267bbf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020190" fbc:label="XFCFBP8418_020190" fbc:name="XFCFBP8418_020190" metaid="_31bbb514-1d52-4727-91cb-367af12e95ca"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004940" fbc:label="XFCFBP8418_004940" fbc:name="XFCFBP8418_004940" metaid="a2f20753-c245-477e-8363-8f5e45c50f5d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021160" fbc:label="XFCFBP8418_021160" fbc:name="XFCFBP8418_021160" metaid="_844bdacc-d091-457d-9c4d-846cb9aab3c1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025760" fbc:label="XFCFBP8418_025760" fbc:name="XFCFBP8418_025760" metaid="fd8a601e-e56f-4263-9aa7-6ed9bf85f958"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024670" fbc:label="XFCFBP8418_024670" fbc:name="XFCFBP8418_024670" metaid="_2bbe03ce-c814-417a-b9c0-e8a1f29f4106"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004820" fbc:label="XFCFBP8418_004820" fbc:name="XFCFBP8418_004820" metaid="_41cb6d94-13d8-461e-a217-29a68e21cd2b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023580" fbc:label="XFCFBP8418_023580" fbc:name="XFCFBP8418_023580" metaid="_31ff72d7-4e30-4563-85aa-4afc58dd6bee"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000460" fbc:label="XFCFBP8418_000460" fbc:name="XFCFBP8418_000460" metaid="d7ea14e6-cd6c-4404-b973-486ade662242"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026730" fbc:label="XFCFBP8418_026730" fbc:name="XFCFBP8418_026730" metaid="e876348e-787e-4f2a-8904-e675c2589c17"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025640" fbc:label="XFCFBP8418_025640" fbc:name="XFCFBP8418_025640" metaid="b5b93812-bd2e-4ca8-8328-e1d35e17ac3a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023100" fbc:label="XFCFBP8418_023100" fbc:name="XFCFBP8418_023100" metaid="f62e0096-7b12-4db3-a7b0-2e1cfa0302c6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027800" fbc:label="XFCFBP8418_027800" fbc:name="XFCFBP8418_027800" metaid="_8beb93ba-34a4-4330-86bf-2c47b1cb7f2e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004700" fbc:label="XFCFBP8418_004700" fbc:name="XFCFBP8418_004700" metaid="_2aceabe8-5294-42eb-9d3b-2506634c68d5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005910" fbc:label="XFCFBP8418_005910" fbc:name="XFCFBP8418_005910" metaid="a7b44241-024e-49c1-88af-1e1108cf09eb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013540" fbc:label="XFCFBP8418_013540" fbc:name="XFCFBP8418_013540" metaid="_83bdba7b-0eb0-4dfb-99ed-6e365240d870"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011240" fbc:label="XFCFBP8418_011240" fbc:name="XFCFBP8418_011240" metaid="_568b9959-99b6-49bd-86d7-04e773d940da"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012210" fbc:label="XFCFBP8418_012210" fbc:name="XFCFBP8418_012210" metaid="_23f706bb-7ef8-44ad-9ca8-41984c2dce7d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010390" fbc:label="XFCFBP8418_010390" fbc:name="XFCFBP8418_010390" metaid="d0d39b07-b3e7-42c7-bf5e-7b40253b22df"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005920" fbc:label="XFCFBP8418_005920" fbc:name="XFCFBP8418_005920" metaid="_5d489210-a636-4233-9352-ea58685a9656"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022360" fbc:label="XFCFBP8418_022360" fbc:name="XFCFBP8418_022360" metaid="_0a90d8d2-093e-48f7-b9fa-67c5d957fdd7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002650" fbc:label="XFCFBP8418_002650" fbc:name="XFCFBP8418_002650" metaid="b1dca6ff-07cd-484d-930b-b580a9968327"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001440" fbc:label="XFCFBP8418_001440" fbc:name="XFCFBP8418_001440" metaid="b8f8ee5b-a2d2-4a4d-8cfe-46fa4d831bab"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003500" fbc:label="XFCFBP8418_003500" fbc:name="XFCFBP8418_003500" metaid="d8165256-ceb8-458a-92a1-eb77924e963f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022240" fbc:label="XFCFBP8418_022240" fbc:name="XFCFBP8418_022240" metaid="b6b55b69-82f1-46f1-a523-fb6f2548ff30"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004950" fbc:label="XFCFBP8418_004950" fbc:name="XFCFBP8418_004950" metaid="_93bd6dfb-a354-45d5-8860-8c53f60fec10"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001200" fbc:label="XFCFBP8418_001200" fbc:name="XFCFBP8418_001200" metaid="_1b79d702-bdbd-4c3b-b4fe-d018a40724dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003740" fbc:label="XFCFBP8418_003740" fbc:name="XFCFBP8418_003740" metaid="_6d285f1c-cc1b-496d-809a-8745d784622d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002410" fbc:label="XFCFBP8418_002410" fbc:name="XFCFBP8418_002410" metaid="ae1cafff-6828-4ba6-ac3c-74d917a6c9bf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021150" fbc:label="XFCFBP8418_021150" fbc:name="XFCFBP8418_021150" metaid="_104ebe94-6090-484f-a178-f023a047949b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003980" fbc:label="XFCFBP8418_003980" fbc:name="XFCFBP8418_003980" metaid="_56d2c8a6-ab95-45b5-b867-c5ed340ae795"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026720" fbc:label="XFCFBP8418_026720" fbc:name="XFCFBP8418_026720" metaid="a0a57601-57b4-407f-b3a8-eb451093c528"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025630" fbc:label="XFCFBP8418_025630" fbc:name="XFCFBP8418_025630" metaid="ec323b50-c5ce-4b1c-8d32-997cc14df53a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022120" fbc:label="XFCFBP8418_022120" fbc:name="XFCFBP8418_022120" metaid="_5e39afe7-114c-45c9-8230-63a54558ca2c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001680" fbc:label="XFCFBP8418_001680" fbc:name="XFCFBP8418_001680" metaid="_56f21c8d-a2da-4095-b76f-62ba3b7bc4c5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012220" fbc:label="XFCFBP8418_012220" fbc:name="XFCFBP8418_012220" metaid="c6dc37d0-3831-45ca-ace8-8281e99e1acc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011250" fbc:label="XFCFBP8418_011250" fbc:name="XFCFBP8418_011250" metaid="ba9794ea-f15b-40da-b888-20adb293656e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017910" fbc:label="XFCFBP8418_017910" fbc:name="XFCFBP8418_017910" metaid="_8406f6bb-cf99-4429-b21c-de23d8daf0b6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011490" fbc:label="XFCFBP8418_011490" fbc:name="XFCFBP8418_011490" metaid="_0774d6db-8dbe-4cf2-9d77-e3cbb1ef1dc9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012340" fbc:label="XFCFBP8418_012340" fbc:name="XFCFBP8418_012340" metaid="_6542b3ae-24bb-4bf0-bae9-b01252632fd1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014880" fbc:label="XFCFBP8418_014880" fbc:name="XFCFBP8418_014880" metaid="_1a321a47-a80c-4dae-b371-e5edc0ce7eb9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021180" fbc:label="XFCFBP8418_021180" fbc:name="XFCFBP8418_021180" metaid="d3138cd5-c6ef-4a4b-8b84-e4507850433d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017900" fbc:label="XFCFBP8418_017900" fbc:name="XFCFBP8418_017900" metaid="f547d9c3-d437-4897-9641-39a61694c680"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026750" fbc:label="XFCFBP8418_026750" fbc:name="XFCFBP8418_026750" metaid="ddc6919f-69c1-486a-a9a4-00c1961033a0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003510" fbc:label="XFCFBP8418_003510" fbc:name="XFCFBP8418_003510" metaid="_38b2c686-2fa8-4d6a-bddf-91f712349bbe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027840" fbc:label="XFCFBP8418_027840" fbc:name="XFCFBP8418_027840" metaid="_25bc2b48-319c-4ba1-a3f6-7bbed8f11fc9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025660" fbc:label="XFCFBP8418_025660" fbc:name="XFCFBP8418_025660" metaid="d7554927-39af-47c3-a9b1-1587a1a11af3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027720" fbc:label="XFCFBP8418_027720" fbc:name="XFCFBP8418_027720" metaid="_3fe476a7-4217-45c3-9847-a4914c3b7f83"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023120" fbc:label="XFCFBP8418_023120" fbc:name="XFCFBP8418_023120" metaid="dadc7004-890a-484a-84b9-4865f25c9bea"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024570" fbc:label="XFCFBP8418_024570" fbc:name="XFCFBP8418_024570" metaid="_1f7b5fd5-e828-44ef-a16d-f1f2c0e68ef9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003630" fbc:label="XFCFBP8418_003630" fbc:name="XFCFBP8418_003630" metaid="_328f5206-efe3-4491-a97c-491c67753051"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024690" fbc:label="XFCFBP8418_024690" fbc:name="XFCFBP8418_024690" metaid="_1f0f8dc0-c7ac-4402-8b33-0de82d824edb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001690" fbc:label="XFCFBP8418_001690" fbc:name="XFCFBP8418_001690" metaid="_5ef6c37c-bc5c-4ad9-b5d5-75fe190ed7dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003990" fbc:label="XFCFBP8418_003990" fbc:name="XFCFBP8418_003990" metaid="_0a0e2047-eac0-4c69-a594-f0e3b3096dfb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023000" fbc:label="XFCFBP8418_023000" fbc:name="XFCFBP8418_023000" metaid="_89ac02cf-5904-4e5f-91ac-0ab1190b4a9c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017920" fbc:label="XFCFBP8418_017920" fbc:name="XFCFBP8418_017920" metaid="_6d308aa9-0ba4-4d37-adbb-33aa908e3e48"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017800" fbc:label="XFCFBP8418_017800" fbc:name="XFCFBP8418_017800" metaid="_39151657-7807-4cd1-900a-708c0805f914"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011260" fbc:label="XFCFBP8418_011260" fbc:name="XFCFBP8418_011260" metaid="f672e34e-32b0-4900-8e31-6d68ed420bd0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011380" fbc:label="XFCFBP8418_011380" fbc:name="XFCFBP8418_011380" metaid="a724c53f-7214-4d85-9215-491d72b53228"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014890" fbc:label="XFCFBP8418_014890" fbc:name="XFCFBP8418_014890" metaid="_2f7b26c7-3b99-46c9-9f12-addb9f9c1316"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012590" fbc:label="XFCFBP8418_012590" fbc:name="XFCFBP8418_012590" metaid="_303aa788-bfa4-4adc-92e0-0a619d17037f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012350" fbc:label="XFCFBP8418_012350" fbc:name="XFCFBP8418_012350" metaid="_8a24f528-f805-4c77-b8c5-df6e24928d62"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015860" fbc:label="XFCFBP8418_015860" fbc:name="XFCFBP8418_015860" metaid="_099edf7c-1eed-4be9-bc51-e4263fe9f90f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014650" fbc:label="XFCFBP8418_014650" fbc:name="XFCFBP8418_014650" metaid="_2e1ea636-c3b9-4109-8df0-be251373756f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025650" fbc:label="XFCFBP8418_025650" fbc:name="XFCFBP8418_025650" metaid="d3af8b3f-fd1c-45cb-bc9c-e509b1f54971"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001100" fbc:label="XFCFBP8418_001100" fbc:name="XFCFBP8418_001100" metaid="a74d870f-bde4-44c6-b763-ec6c5999482a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003400" fbc:label="XFCFBP8418_003400" fbc:name="XFCFBP8418_003400" metaid="_2480b1d5-5a1b-4867-a3fd-6c18fe04b5dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002430" fbc:label="XFCFBP8418_002430" fbc:name="XFCFBP8418_002430" metaid="_5326d2ff-3c06-4c5f-a968-d1f1396c4852"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027830" fbc:label="XFCFBP8418_027830" fbc:name="XFCFBP8418_027830" metaid="_707608ac-e418-46f0-8cc6-ffee051a99da"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023590" fbc:label="XFCFBP8418_023590" fbc:name="XFCFBP8418_023590" metaid="f9cd8480-632c-4e88-902c-6b3aec751592"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024680" fbc:label="XFCFBP8418_024680" fbc:name="XFCFBP8418_024680" metaid="f5e73250-5467-49aa-aadb-8c8d48c36ea5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005940" fbc:label="XFCFBP8418_005940" fbc:name="XFCFBP8418_005940" metaid="c9d9e5e9-74f6-4879-97bd-3f334f856d47"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003880" fbc:label="XFCFBP8418_003880" fbc:name="XFCFBP8418_003880" metaid="ff6ca9e3-0135-45ca-b276-463a698bbc99"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023110" fbc:label="XFCFBP8418_023110" fbc:name="XFCFBP8418_023110" metaid="_0e6c132a-bdca-464b-bb03-3ed95724ae8a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025410" fbc:label="XFCFBP8418_025410" fbc:name="XFCFBP8418_025410" metaid="f7c9264f-e91b-4bf7-a725-65452feba723"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026740" fbc:label="XFCFBP8418_026740" fbc:name="XFCFBP8418_026740" metaid="_37512ad2-5300-4a06-8581-f9fb27c0a613"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014300" fbc:label="XFCFBP8418_014300" fbc:name="XFCFBP8418_014300" metaid="_0da1f0b5-fa04-4844-afd9-5fa97f54340e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011030" fbc:label="XFCFBP8418_011030" fbc:name="XFCFBP8418_011030" metaid="_3817e00f-f5de-4bfc-b848-14bb36598c0e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017930" fbc:label="XFCFBP8418_017930" fbc:name="XFCFBP8418_017930" metaid="d3441fd2-9237-464d-b259-63929d173dbe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012360" fbc:label="XFCFBP8418_012360" fbc:name="XFCFBP8418_012360" metaid="_70635c18-c4b5-40a4-8d09-c4f090874bd6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014540" fbc:label="XFCFBP8418_014540" fbc:name="XFCFBP8418_014540" metaid="dc8e17e7-3edc-44bc-be7d-c96b76e9bb03"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022170" fbc:label="XFCFBP8418_022170" fbc:name="XFCFBP8418_022170" metaid="d9a3b42d-d3f1-49d9-ad08-4535bc0b83a7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021080" fbc:label="XFCFBP8418_021080" fbc:name="XFCFBP8418_021080" metaid="_66552558-fa69-412d-924d-633ed8a3bab9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023020" fbc:label="XFCFBP8418_023020" fbc:name="XFCFBP8418_023020" metaid="_032c5212-a731-40bc-bb3b-056200b672fc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025320" fbc:label="XFCFBP8418_025320" fbc:name="XFCFBP8418_025320" metaid="_211ec943-227e-4bb4-97db-c48e8d377ea0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026530" fbc:label="XFCFBP8418_026530" fbc:name="XFCFBP8418_026530" metaid="_30379727-01d4-4e36-98af-ee38178201a8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025440" fbc:label="XFCFBP8418_025440" fbc:name="XFCFBP8418_025440" metaid="_586b6a5e-e081-4449-ab0f-0e7486272c8c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002320" fbc:label="XFCFBP8418_002320" fbc:name="XFCFBP8418_002320" metaid="_05876e6b-03bc-426e-bee3-cd8b65b821aa"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025680" fbc:label="XFCFBP8418_025680" fbc:name="XFCFBP8418_025680" metaid="e12c45f1-06ac-4897-a30f-3ee365019bfe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002680" fbc:label="XFCFBP8418_002680" fbc:name="XFCFBP8418_002680" metaid="_34659f5a-f040-42be-87b3-a96a40b48489"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011280" fbc:label="XFCFBP8418_011280" fbc:name="XFCFBP8418_011280" metaid="_12b0e6fe-8e75-4386-ad65-8d5f7acad0b8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014310" fbc:label="XFCFBP8418_014310" fbc:name="XFCFBP8418_014310" metaid="_5a4f0507-a27d-4c04-a503-028bbae46981"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017940" fbc:label="XFCFBP8418_017940" fbc:name="XFCFBP8418_017940" metaid="_7b76ac93-f597-41d3-9b53-1227e16f6f6f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017820" fbc:label="XFCFBP8418_017820" fbc:name="XFCFBP8418_017820" metaid="_9dbee0b8-66ce-43ae-8371-9469e354fb84"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012370" fbc:label="XFCFBP8418_012370" fbc:name="XFCFBP8418_012370" metaid="b203b749-9563-4325-b3e1-6f2bb1c7c09e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012250" fbc:label="XFCFBP8418_012250" fbc:name="XFCFBP8418_012250" metaid="_9bc7f283-ec28-4ac6-993f-bd4d6c8028c0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014550" fbc:label="XFCFBP8418_014550" fbc:name="XFCFBP8418_014550" metaid="_8b4eb2a6-60f0-47a5-887a-17ede4e7f651"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015760" fbc:label="XFCFBP8418_015760" fbc:name="XFCFBP8418_015760" metaid="_7fb45179-c61e-4a3d-ac3a-501dfb961250"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026760" fbc:label="XFCFBP8418_026760" fbc:name="XFCFBP8418_026760" metaid="_0bbc4419-0767-47be-a9ec-46238a7315cf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025670" fbc:label="XFCFBP8418_025670" fbc:name="XFCFBP8418_025670" metaid="_75878dcb-5540-46e2-973f-fdfa729d1654"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022160" fbc:label="XFCFBP8418_022160" fbc:name="XFCFBP8418_022160" metaid="_24a7ada8-d46c-45b0-be49-ff32aed1fd69"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023250" fbc:label="XFCFBP8418_023250" fbc:name="XFCFBP8418_023250" metaid="f038ca3f-480e-4308-9551-f04bdf99d741"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003300" fbc:label="XFCFBP8418_003300" fbc:name="XFCFBP8418_003300" metaid="_167d3eab-5c85-4a31-b379-029464be376b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004870" fbc:label="XFCFBP8418_004870" fbc:name="XFCFBP8418_004870" metaid="e4c76c11-d98c-45ad-b719-08c2c1aaa071"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004750" fbc:label="XFCFBP8418_004750" fbc:name="XFCFBP8418_004750" metaid="a1be61f5-acdd-4f7f-984e-ada9f3697924"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002690" fbc:label="XFCFBP8418_002690" fbc:name="XFCFBP8418_002690" metaid="a5c7d266-d21f-477e-b0ff-5c056ddc045c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027970" fbc:label="XFCFBP8418_027970" fbc:name="XFCFBP8418_027970" metaid="ad09bc94-24c8-4014-aa46-a3dcb4e55c69"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002450" fbc:label="XFCFBP8418_002450" fbc:name="XFCFBP8418_002450" metaid="_495cac65-d389-4532-9399-41679d4fdb5f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001240" fbc:label="XFCFBP8418_001240" fbc:name="XFCFBP8418_001240" metaid="_72668afd-75dd-4bb6-84f1-d53aa5532ab9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027850" fbc:label="XFCFBP8418_027850" fbc:name="XFCFBP8418_027850" metaid="b4c0a6c9-0283-482d-aabb-092a228dabf8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011290" fbc:label="XFCFBP8418_011290" fbc:name="XFCFBP8418_011290" metaid="_8091067c-7cd8-4e00-bb80-214ac6393e2d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010080" fbc:label="XFCFBP8418_010080" fbc:name="XFCFBP8418_010080" metaid="_49303a59-fb6f-408b-8228-492b36f05ae5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016500" fbc:label="XFCFBP8418_016500" fbc:name="XFCFBP8418_016500" metaid="_7942cc8f-0a2b-4a23-9dcc-b5c270126543"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015410" fbc:label="XFCFBP8418_015410" fbc:name="XFCFBP8418_015410" metaid="ecd52943-b70b-447a-b98a-481dd029c834"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017710" fbc:label="XFCFBP8418_017710" fbc:name="XFCFBP8418_017710" metaid="_0f053eca-0d5a-4836-a745-a6658358d869"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011050" fbc:label="XFCFBP8418_011050" fbc:name="XFCFBP8418_011050" metaid="_8c5dea1a-b5ca-40e0-8388-58dd1b51c0d4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015770" fbc:label="XFCFBP8418_015770" fbc:name="XFCFBP8418_015770" metaid="_87dde2f7-98a5-472c-bd8b-4b4f3447a6c0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014680" fbc:label="XFCFBP8418_014680" fbc:name="XFCFBP8418_014680" metaid="_50144758-6d51-431e-acd2-eb262868a2dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014560" fbc:label="XFCFBP8418_014560" fbc:name="XFCFBP8418_014560" metaid="b51bfa79-dd07-4349-9e71-51ee0b2088b1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013350" fbc:label="XFCFBP8418_013350" fbc:name="XFCFBP8418_013350" metaid="c18b5ccf-2679-45a3-a97b-c0ca6feb6a0d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025580" fbc:label="XFCFBP8418_025580" fbc:name="XFCFBP8418_025580" metaid="_77208b6a-fc31-4a56-8e25-b31136fb5db2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022190" fbc:label="XFCFBP8418_022190" fbc:name="XFCFBP8418_022190" metaid="cd63720c-454c-4a09-9b0b-9342afbec3e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025100" fbc:label="XFCFBP8418_025100" fbc:name="XFCFBP8418_025100" metaid="_23768fb0-04d5-433c-bc51-24691b5a9843"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002100" fbc:label="XFCFBP8418_002100" fbc:name="XFCFBP8418_002100" metaid="cd3b02d7-46a3-412c-b0b0-006728a5b532"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025220" fbc:label="XFCFBP8418_025220" fbc:name="XFCFBP8418_025220" metaid="_5aa9b574-470f-4f13-9f36-7ab319df76f3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026550" fbc:label="XFCFBP8418_026550" fbc:name="XFCFBP8418_026550" metaid="_06f4a428-c8ed-4c59-969f-af789f2f4c33"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025340" fbc:label="XFCFBP8418_025340" fbc:name="XFCFBP8418_025340" metaid="_98eadfa3-2aed-479e-ae1f-c8c2f14ec5f6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000160" fbc:label="XFCFBP8418_000160" fbc:name="XFCFBP8418_000160" metaid="_09f19ec2-3ddb-4a36-aa9d-779b69890f80"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011060" fbc:label="XFCFBP8418_011060" fbc:name="XFCFBP8418_011060" metaid="_022e7903-f179-41ef-9923-a94bac63fdc8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016510" fbc:label="XFCFBP8418_016510" fbc:name="XFCFBP8418_016510" metaid="_333fd8d3-1832-49ae-a651-f0291e389915"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017720" fbc:label="XFCFBP8418_017720" fbc:name="XFCFBP8418_017720" metaid="d1153d78-9c8c-425b-87dc-8f8c8d39b7f3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012150" fbc:label="XFCFBP8418_012150" fbc:name="XFCFBP8418_012150" metaid="_18e66476-47d7-4d0b-973f-9189ec1a119b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016870" fbc:label="XFCFBP8418_016870" fbc:name="XFCFBP8418_016870" metaid="be67357c-353d-4bb3-acfc-ad44e3b68552"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013360" fbc:label="XFCFBP8418_013360" fbc:name="XFCFBP8418_013360" metaid="cf05cbde-8766-4e0c-829f-77a0aab01684"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013240" fbc:label="XFCFBP8418_013240" fbc:name="XFCFBP8418_013240" metaid="_48bb7905-917c-493c-8d6a-45d5412f3838"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000170" fbc:label="XFCFBP8418_000170" fbc:name="XFCFBP8418_000170" metaid="_115f008d-c827-461a-a446-341d80712d24"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025690" fbc:label="XFCFBP8418_025690" fbc:name="XFCFBP8418_025690" metaid="_528d601e-be5d-4b97-9131-a785526ae8f1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021090" fbc:label="XFCFBP8418_021090" fbc:name="XFCFBP8418_021090" metaid="_06a8ed61-2453-46ab-903f-4abd1b110bbb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025330" fbc:label="XFCFBP8418_025330" fbc:name="XFCFBP8418_025330" metaid="_6116020d-9538-4156-a16a-0575c9a535c8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026540" fbc:label="XFCFBP8418_026540" fbc:name="XFCFBP8418_026540" metaid="badf5bdd-8b84-4628-a72b-079451e139e4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025570" fbc:label="XFCFBP8418_025570" fbc:name="XFCFBP8418_025570" metaid="aad06541-9c8b-4898-bdfd-855b90a9f797"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026780" fbc:label="XFCFBP8418_026780" fbc:name="XFCFBP8418_026780" metaid="_0d77ea2b-4b20-4652-bc48-22b47d0f962f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006950" fbc:label="XFCFBP8418_006950" fbc:name="XFCFBP8418_006950" metaid="_44adbc6d-b8b5-4345-8693-59fd674fd662"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005980" fbc:label="XFCFBP8418_005980" fbc:name="XFCFBP8418_005980" metaid="f5096b33-a830-42e7-a5be-de2f60e9faaf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004890" fbc:label="XFCFBP8418_004890" fbc:name="XFCFBP8418_004890" metaid="d7d00bab-93b3-4b36-82e6-76e1362bf5bd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003680" fbc:label="XFCFBP8418_003680" fbc:name="XFCFBP8418_003680" metaid="_75f405e8-b132-48d8-8681-3ee502ef7238"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004770" fbc:label="XFCFBP8418_004770" fbc:name="XFCFBP8418_004770" metaid="cf3baa1f-35c7-4113-bb5a-8b363d4f86ff"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013370" fbc:label="XFCFBP8418_013370" fbc:name="XFCFBP8418_013370" metaid="_2e267577-d39d-4953-912a-9bab0140d30b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012160" fbc:label="XFCFBP8418_012160" fbc:name="XFCFBP8418_012160" metaid="ebc25baa-79be-4d1c-b6c3-fc1b6ee80b5d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011070" fbc:label="XFCFBP8418_011070" fbc:name="XFCFBP8418_011070" metaid="e3f8f29d-14f5-49d6-8f20-7ae281119c9a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011190" fbc:label="XFCFBP8418_011190" fbc:name="XFCFBP8418_011190" metaid="_5e86e2ca-828a-4cb7-9a5b-9ba6d0bfb726"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014460" fbc:label="XFCFBP8418_014460" fbc:name="XFCFBP8418_014460" metaid="_5068f707-0032-4d21-b40c-fa4b7acbf625"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015550" fbc:label="XFCFBP8418_015550" fbc:name="XFCFBP8418_015550" metaid="c8eca82e-de69-4327-8144-0fe64b66e585"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016880" fbc:label="XFCFBP8418_016880" fbc:name="XFCFBP8418_016880" metaid="c9daa238-876c-4058-97b3-7cf738027d45"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014340" fbc:label="XFCFBP8418_014340" fbc:name="XFCFBP8418_014340" metaid="f6345c6a-44aa-4873-addd-0abb173eef88"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015310" fbc:label="XFCFBP8418_015310" fbc:name="XFCFBP8418_015310" metaid="_71c33b32-596b-4527-b7b3-581b0151b1dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015430" fbc:label="XFCFBP8418_015430" fbc:name="XFCFBP8418_015430" metaid="_3669f30d-7a62-4c67-ad22-16e2f8158c59"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003690" fbc:label="XFCFBP8418_003690" fbc:name="XFCFBP8418_003690" metaid="ff6d1f99-b99f-4f0c-a399-e412a32682a5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001390" fbc:label="XFCFBP8418_001390" fbc:name="XFCFBP8418_001390" metaid="e3d6c5b2-b26c-4fcb-a6c2-75b5f1c0ff98"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026570" fbc:label="XFCFBP8418_026570" fbc:name="XFCFBP8418_026570" metaid="_9a9e6b27-14dd-4201-a9b8-71e5ef0d75e8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025480" fbc:label="XFCFBP8418_025480" fbc:name="XFCFBP8418_025480" metaid="a67fc0bc-afcd-4d0d-a72f-a6f87f305816"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026210" fbc:label="XFCFBP8418_026210" fbc:name="XFCFBP8418_026210" metaid="af90d175-5828-41be-b0d8-646106a9ead8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024030" fbc:label="XFCFBP8418_024030" fbc:name="XFCFBP8418_024030" metaid="_72519761-a5d2-4bc8-951f-2ed1a102beb5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025240" fbc:label="XFCFBP8418_025240" fbc:name="XFCFBP8418_025240" metaid="d81440d1-cdb5-4d9a-80ef-18991fff225a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004540" fbc:label="XFCFBP8418_004540" fbc:name="XFCFBP8418_004540" metaid="_772b6239-c720-4b40-8212-378f28a4896e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001030" fbc:label="XFCFBP8418_001030" fbc:name="XFCFBP8418_001030" metaid="af123ca2-6c8c-4431-8fe3-0b8e5df5d6bf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003570" fbc:label="XFCFBP8418_003570" fbc:name="XFCFBP8418_003570" metaid="_055dc003-c313-48c5-8ffe-666cf65727cb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004780" fbc:label="XFCFBP8418_004780" fbc:name="XFCFBP8418_004780" metaid="af4c5a13-80ec-4e6a-beb1-505ea80bf502"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004660" fbc:label="XFCFBP8418_004660" fbc:name="XFCFBP8418_004660" metaid="a4005edc-a4cc-4936-b93f-ed0c6aca7790"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003450" fbc:label="XFCFBP8418_003450" fbc:name="XFCFBP8418_003450" metaid="f12e9d00-1baa-4900-8153-862aaf1b49e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002120" fbc:label="XFCFBP8418_002120" fbc:name="XFCFBP8418_002120" metaid="caea4506-4a77-4eb4-bc3e-33c0f7c38c0b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014590" fbc:label="XFCFBP8418_014590" fbc:name="XFCFBP8418_014590" metaid="_83771f40-7a75-48f4-8227-0e57886271ef"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016890" fbc:label="XFCFBP8418_016890" fbc:name="XFCFBP8418_016890" metaid="bda2c0ff-ce02-4c85-8c9a-4575f6b3975c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013260" fbc:label="XFCFBP8418_013260" fbc:name="XFCFBP8418_013260" metaid="_849e6b6a-38f1-4404-87a4-5ade62abaad8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014470" fbc:label="XFCFBP8418_014470" fbc:name="XFCFBP8418_014470" metaid="_663fb483-0d6d-42c7-9307-02d1edc26664"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012050" fbc:label="XFCFBP8418_012050" fbc:name="XFCFBP8418_012050" metaid="ce89e242-1fc1-4a90-8207-0ae9db237d09"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015440" fbc:label="XFCFBP8418_015440" fbc:name="XFCFBP8418_015440" metaid="e412aa09-e1b4-423d-ab60-a1d3cc729063"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013020" fbc:label="XFCFBP8418_013020" fbc:name="XFCFBP8418_013020" metaid="f6705be3-5f6d-43a6-b22c-a09dcbdad115"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015560" fbc:label="XFCFBP8418_015560" fbc:name="XFCFBP8418_015560" metaid="ac904367-603d-4905-a3ba-b378c6997d65"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015200" fbc:label="XFCFBP8418_015200" fbc:name="XFCFBP8418_015200" metaid="_21dcaa14-d058-4eee-9c48-7d194d781dd6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015320" fbc:label="XFCFBP8418_015320" fbc:name="XFCFBP8418_015320" metaid="_506bf62c-c838-4df8-89c9-1b459e836692"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003580" fbc:label="XFCFBP8418_003580" fbc:name="XFCFBP8418_003580" metaid="_4a0297a6-fc2f-446e-acc5-cd12e276aa7b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004790" fbc:label="XFCFBP8418_004790" fbc:name="XFCFBP8418_004790" metaid="_7a1d17a3-8be1-424a-b14a-e7dab07a9cd6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002490" fbc:label="XFCFBP8418_002490" fbc:name="XFCFBP8418_002490" metaid="ab90a26a-9052-4775-9bce-fb37eb376137"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025470" fbc:label="XFCFBP8418_025470" fbc:name="XFCFBP8418_025470" metaid="_99e1c255-d2ff-46fd-8f42-0a095e68ed8c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026200" fbc:label="XFCFBP8418_026200" fbc:name="XFCFBP8418_026200" metaid="c49c46dd-adb8-45ee-8c12-43cac54422dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025230" fbc:label="XFCFBP8418_025230" fbc:name="XFCFBP8418_025230" metaid="_6a7145a7-4778-43b7-b7a7-7412115e13eb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026560" fbc:label="XFCFBP8418_026560" fbc:name="XFCFBP8418_026560" metaid="_3608d677-0122-4f53-8347-682c60a69cf9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001040" fbc:label="XFCFBP8418_001040" fbc:name="XFCFBP8418_001040" metaid="_2903b1b8-906b-44fc-8cc2-7f92d0fc23fd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004550" fbc:label="XFCFBP8418_004550" fbc:name="XFCFBP8418_004550" metaid="f9170e26-52a6-4cca-8585-7d0f6ce61c36"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003340" fbc:label="XFCFBP8418_003340" fbc:name="XFCFBP8418_003340" metaid="_688d8471-f089-477a-9c2f-f628d16a73c4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014480" fbc:label="XFCFBP8418_014480" fbc:name="XFCFBP8418_014480" metaid="_14e0cbe8-36d3-4982-9731-62bb23a2a15e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013030" fbc:label="XFCFBP8418_013030" fbc:name="XFCFBP8418_013030" metaid="_2bf8a5f1-9a7e-426f-9c03-7859b60c669b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015330" fbc:label="XFCFBP8418_015330" fbc:name="XFCFBP8418_015330" metaid="daf79028-d1a1-4981-87ff-1377043894c7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016540" fbc:label="XFCFBP8418_016540" fbc:name="XFCFBP8418_016540" metaid="_2ba3745e-3f56-4ff6-a6e6-a7389179aa0b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005890" fbc:label="XFCFBP8418_005890" fbc:name="XFCFBP8418_005890" metaid="d8651f5a-0acd-41a4-99cf-4c2a32e974bc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003470" fbc:label="XFCFBP8418_003470" fbc:name="XFCFBP8418_003470" metaid="cea8adab-a74d-400c-b5db-58b45f811944"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004680" fbc:label="XFCFBP8418_004680" fbc:name="XFCFBP8418_004680" metaid="_2106ddcd-1fea-43ac-84b1-898642074d91"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001170" fbc:label="XFCFBP8418_001170" fbc:name="XFCFBP8418_001170" metaid="fe8535a6-ead9-4e91-9760-ab0f235aed32"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007710" fbc:label="XFCFBP8418_007710" fbc:name="XFCFBP8418_007710" metaid="_4dd560ef-6db6-43d0-ba82-5da1995b93f3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024050" fbc:label="XFCFBP8418_024050" fbc:name="XFCFBP8418_024050" metaid="bfb65221-74ff-4bc4-956c-fa4ad83584e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025260" fbc:label="XFCFBP8418_025260" fbc:name="XFCFBP8418_025260" metaid="c0c5bc12-3306-4cc7-b1ef-d79986dc704b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025380" fbc:label="XFCFBP8418_025380" fbc:name="XFCFBP8418_025380" metaid="_996c7f65-a8dc-4be9-a2bc-9156432f7fef"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026230" fbc:label="XFCFBP8418_026230" fbc:name="XFCFBP8418_026230" metaid="_9d8f837f-b005-485e-b126-8cacfbc2f436"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002140" fbc:label="XFCFBP8418_002140" fbc:name="XFCFBP8418_002140" metaid="_541a8650-a91c-4b67-9fab-22375e627b98"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015580" fbc:label="XFCFBP8418_015580" fbc:name="XFCFBP8418_015580" metaid="_5ee398ec-e3bd-4b69-8aec-383318aac58e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013040" fbc:label="XFCFBP8418_013040" fbc:name="XFCFBP8418_013040" metaid="_5dbe7d82-c5b3-4c60-a3f8-cde3179055e9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015100" fbc:label="XFCFBP8418_015100" fbc:name="XFCFBP8418_015100" metaid="ebce0add-0b51-46a4-aa49-fa3bb5316238"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004690" fbc:label="XFCFBP8418_004690" fbc:name="XFCFBP8418_004690" metaid="_4796d981-d777-4f00-8143-630046a4b165"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003480" fbc:label="XFCFBP8418_003480" fbc:name="XFCFBP8418_003480" metaid="cb89d091-a95d-45b5-a4dc-2412d0ecb5ed"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003360" fbc:label="XFCFBP8418_003360" fbc:name="XFCFBP8418_003360" metaid="_08cf6357-287d-4d2d-ab2d-5e051c41106a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007840" fbc:label="XFCFBP8418_007840" fbc:name="XFCFBP8418_007840" metaid="_53fa3704-1080-4937-a6fd-1d143f2ee92e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002150" fbc:label="XFCFBP8418_002150" fbc:name="XFCFBP8418_002150" metaid="_10c3e447-3d8d-42ae-97ee-d34461cb8b04"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002270" fbc:label="XFCFBP8418_002270" fbc:name="XFCFBP8418_002270" metaid="_9d569d38-576b-432e-9dd4-78a3566988e8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008810" fbc:label="XFCFBP8418_008810" fbc:name="XFCFBP8418_008810" metaid="_650ce2d4-3917-49ac-9f15-ae6a8c84b6ee"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025250" fbc:label="XFCFBP8418_025250" fbc:name="XFCFBP8418_025250" metaid="_8de0f863-36f0-4198-9a91-17b925b65947"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007600" fbc:label="XFCFBP8418_007600" fbc:name="XFCFBP8418_007600" metaid="_0f34f093-4ec6-4fb9-b9fa-f466865fa41e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023070" fbc:label="XFCFBP8418_023070" fbc:name="XFCFBP8418_023070" metaid="a6cc3135-2eab-4009-b248-5c4fd17fdec7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026220" fbc:label="XFCFBP8418_026220" fbc:name="XFCFBP8418_026220" metaid="cad58c4a-f2be-4aab-8344-e723ae082f04"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006750" fbc:label="XFCFBP8418_006750" fbc:name="XFCFBP8418_006750" metaid="_618e9e83-ab5e-42d3-be24-bc3b50b04e10"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017890" fbc:label="XFCFBP8418_017890" fbc:name="XFCFBP8418_017890" metaid="ecf34dee-c0a5-40d6-9609-40fb6bc241f4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013290" fbc:label="XFCFBP8418_013290" fbc:name="XFCFBP8418_013290" metaid="_7155af0f-5eef-42bd-8727-ecf9942dc136"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015350" fbc:label="XFCFBP8418_015350" fbc:name="XFCFBP8418_015350" metaid="_22ce9923-13d6-4b3a-baa7-2515b025c6a0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015470" fbc:label="XFCFBP8418_015470" fbc:name="XFCFBP8418_015470" metaid="_4bd20d05-3847-4f0d-b97f-7df58db12d54"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020820" fbc:label="XFCFBP8418_020820" fbc:name="XFCFBP8418_020820" metaid="_0fda6ae0-68d9-4dc5-ad4a-1d2c87efee38"/> + <fbc:geneProduct fbc:id="Spontaneous" fbc:label="Spontaneous" fbc:name="Spontaneous" metaid="_91540909-8718-4b1c-960b-3388e4a89d97"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020700" fbc:label="XFCFBP8418_020700" fbc:name="XFCFBP8418_020700" metaid="_109d9d73-14aa-40f2-8a94-fdb6cf571a15"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018620" fbc:label="XFCFBP8418_018620" fbc:name="XFCFBP8418_018620" metaid="_4988d09e-3bf8-4026-9264-116f127f4679"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015110" fbc:label="XFCFBP8418_015110" fbc:name="XFCFBP8418_015110" metaid="_378f2cb0-34a9-4b4a-b61f-026251f691f0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019710" fbc:label="XFCFBP8418_019710" fbc:name="XFCFBP8418_019710" metaid="b4004d86-f693-4493-b83d-c2b7f6697937"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002280" fbc:label="XFCFBP8418_002280" fbc:name="XFCFBP8418_002280" metaid="_86884968-6a36-431d-96da-36bf9dff681e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003250" fbc:label="XFCFBP8418_003250" fbc:name="XFCFBP8418_003250" metaid="_33610fd0-dd4c-419a-9d7b-f7dcc7abff14"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026250" fbc:label="XFCFBP8418_026250" fbc:name="XFCFBP8418_026250" metaid="_586240dd-5bb5-4bd8-a109-6705ec5ef803"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009910" fbc:label="XFCFBP8418_009910" fbc:name="XFCFBP8418_009910" metaid="_928d5383-2b14-4ee5-846e-281a6f659a79"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025280" fbc:label="XFCFBP8418_025280" fbc:name="XFCFBP8418_025280" metaid="c68d039d-3ae3-4d18-9645-623a05e18d8c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004100" fbc:label="XFCFBP8418_004100" fbc:name="XFCFBP8418_004100" metaid="bc23fcdc-5a8c-4344-b10e-d82e22860dcb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004340" fbc:label="XFCFBP8418_004340" fbc:name="XFCFBP8418_004340" metaid="_73ad96a7-ae5a-4c68-87c4-70c09421b11d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003010" fbc:label="XFCFBP8418_003010" fbc:name="XFCFBP8418_003010" metaid="b8fc948f-1eb3-472a-b557-aba33afeeac2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012090" fbc:label="XFCFBP8418_012090" fbc:name="XFCFBP8418_012090" metaid="af2ef496-0887-4661-9940-2c1a33c2e8e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014390" fbc:label="XFCFBP8418_014390" fbc:name="XFCFBP8418_014390" metaid="_919ce9ed-af86-479e-8dff-f616a33e91e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016450" fbc:label="XFCFBP8418_016450" fbc:name="XFCFBP8418_016450" metaid="a72cd43e-93f4-486e-a06c-78020fe722d4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015120" fbc:label="XFCFBP8418_015120" fbc:name="XFCFBP8418_015120" metaid="_70558edf-ca75-42eb-bea1-835bb13067ff"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002170" fbc:label="XFCFBP8418_002170" fbc:name="XFCFBP8418_002170" metaid="_65ca3427-86db-41bc-9a16-a05517f61848"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006890" fbc:label="XFCFBP8418_006890" fbc:name="XFCFBP8418_006890" metaid="e381e312-7d2c-47cc-aa3e-a1944d1384e6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027690" fbc:label="XFCFBP8418_027690" fbc:name="XFCFBP8418_027690" metaid="_6915dfa4-3d35-4336-be22-442879d4fb51"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026240" fbc:label="XFCFBP8418_026240" fbc:name="XFCFBP8418_026240" metaid="cdcc9809-38b2-496c-b728-90ff94f6be74"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025270" fbc:label="XFCFBP8418_025270" fbc:name="XFCFBP8418_025270" metaid="_6438db1e-a55a-40f6-a874-1dd1869330cc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003020" fbc:label="XFCFBP8418_003020" fbc:name="XFCFBP8418_003020" metaid="_301c4a85-795f-4090-b9f0-c3c5be0245aa"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006650" fbc:label="XFCFBP8418_006650" fbc:name="XFCFBP8418_006650" metaid="_8a2c14a2-07b1-413b-af05-95ae0184549a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015370" fbc:label="XFCFBP8418_015370" fbc:name="XFCFBP8418_015370" metaid="_3ec480dc-eebe-476d-9a1f-ad240baecdc9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015130" fbc:label="XFCFBP8418_015130" fbc:name="XFCFBP8418_015130" metaid="_9b16a9b5-fe80-477a-89d1-2cac3b9a5b35"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015250" fbc:label="XFCFBP8418_015250" fbc:name="XFCFBP8418_015250" metaid="_10b0fc8f-b392-4d58-8301-20899e257841"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016460" fbc:label="XFCFBP8418_016460" fbc:name="XFCFBP8418_016460" metaid="f740ef7a-4342-44ef-aa21-b272fec291f2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020600" fbc:label="XFCFBP8418_020600" fbc:name="XFCFBP8418_020600" metaid="_041939b2-a1af-4cc8-8405-1dfab348583d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020720" fbc:label="XFCFBP8418_020720" fbc:name="XFCFBP8418_020720" metaid="ce06c5cb-37f3-4173-a3c0-4a3604ca60b1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019610" fbc:label="XFCFBP8418_019610" fbc:name="XFCFBP8418_019610" metaid="d5e306cc-d6ea-4511-88d5-a5a06dc33436"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018640" fbc:label="XFCFBP8418_018640" fbc:name="XFCFBP8418_018640" metaid="_870d7a70-904d-4ee9-95a4-bd0a1d1d38fe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006660" fbc:label="XFCFBP8418_006660" fbc:name="XFCFBP8418_006660" metaid="_1132991e-2338-4534-88cd-173d17bc6728"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003030" fbc:label="XFCFBP8418_003030" fbc:name="XFCFBP8418_003030" metaid="b64c26db-5ba3-41df-8829-9355284892a6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003390" fbc:label="XFCFBP8418_003390" fbc:name="XFCFBP8418_003390" metaid="cb864f10-b2c1-49a4-8ff1-16929723b7fb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026270" fbc:label="XFCFBP8418_026270" fbc:name="XFCFBP8418_026270" metaid="_34b29c5b-ed08-4244-b46e-d9e5001d8f3b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004000" fbc:label="XFCFBP8418_004000" fbc:name="XFCFBP8418_004000" metaid="_94282519-d92d-4d6a-88d4-cb6f1bbefd0b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015380" fbc:label="XFCFBP8418_015380" fbc:name="XFCFBP8418_015380" metaid="eb4d3ed4-311b-46a2-9e8b-62d549f872cc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018650" fbc:label="XFCFBP8418_018650" fbc:name="XFCFBP8418_018650" metaid="d7bb87eb-bcfd-4b9d-93a9-5a54644e094a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015020" fbc:label="XFCFBP8418_015020" fbc:name="XFCFBP8418_015020" metaid="_7bde40ff-97ad-411d-a372-d5694b60482d"/> + <fbc:geneProduct fbc:id="or" fbc:label="or" fbc:name="or" metaid="_63f3cb00-6971-483a-b5ca-73a6cc703dd9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020710" fbc:label="XFCFBP8418_020710" fbc:name="XFCFBP8418_020710" metaid="d6be4e28-3876-4081-8465-238de7bb1b3e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019500" fbc:label="XFCFBP8418_019500" fbc:name="XFCFBP8418_019500" metaid="b6488c99-cd09-415e-9cf1-2da491f94fdd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019740" fbc:label="XFCFBP8418_019740" fbc:name="XFCFBP8418_019740" metaid="fc2ddb90-a5d6-4292-9bee-30db528b72f6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025290" fbc:label="XFCFBP8418_025290" fbc:name="XFCFBP8418_025290" metaid="_8fbf3310-bea5-40c6-b483-d7a9e6db1ca1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006790" fbc:label="XFCFBP8418_006790" fbc:name="XFCFBP8418_006790" metaid="f3d9076b-4b07-4cef-8773-e7c03bda5ffd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004370" fbc:label="XFCFBP8418_004370" fbc:name="XFCFBP8418_004370" metaid="a5c07e1e-9492-453c-b32c-01139e95f46d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009820" fbc:label="XFCFBP8418_009820" fbc:name="XFCFBP8418_009820" metaid="_662c2bb3-f9e2-4c6d-9e1c-9808710cc9ce"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026260" fbc:label="XFCFBP8418_026260" fbc:name="XFCFBP8418_026260" metaid="_7cc24378-3702-457a-98ba-10e8e010dd9e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004010" fbc:label="XFCFBP8418_004010" fbc:name="XFCFBP8418_004010" metaid="_409fb5e6-d33f-45a2-b216-51997ea555ad"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016360" fbc:label="XFCFBP8418_016360" fbc:name="XFCFBP8418_016360" metaid="_88e7416b-75ea-43ef-9b57-f188a7ab7d57"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015270" fbc:label="XFCFBP8418_015270" fbc:name="XFCFBP8418_015270" metaid="_9025e082-1d7c-4b50-9f08-8e4ebc0b1158"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017690" fbc:label="XFCFBP8418_017690" fbc:name="XFCFBP8418_017690" metaid="_80db08e0-1f2f-494c-b377-23b3d72d172a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015030" fbc:label="XFCFBP8418_015030" fbc:name="XFCFBP8418_015030" metaid="_01340e67-4017-4517-9eb4-aead3b4fcb75"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013090" fbc:label="XFCFBP8418_013090" fbc:name="XFCFBP8418_013090" metaid="_144322cb-f9ee-4fb9-bc9a-4a467446fae5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015390" fbc:label="XFCFBP8418_015390" fbc:name="XFCFBP8418_015390" metaid="_2c60f0ff-a0d9-40fe-a880-41c07c596779"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004140" fbc:label="XFCFBP8418_004140" fbc:name="XFCFBP8418_004140" metaid="_247a23d4-777f-4d92-bbbd-76b4e00fae8e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006440" fbc:label="XFCFBP8418_006440" fbc:name="XFCFBP8418_006440" metaid="_27b41cf0-907d-4f2b-965d-3e4aede931e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009950" fbc:label="XFCFBP8418_009950" fbc:name="XFCFBP8418_009950" metaid="_0b055816-f919-446c-9bf7-f001a865b53a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003290" fbc:label="XFCFBP8418_003290" fbc:name="XFCFBP8418_003290" metaid="_782bf904-b5fe-4466-a99b-1935c3ebbf40"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010930" fbc:label="XFCFBP8418_010930" fbc:name="XFCFBP8418_010930" metaid="_3efac687-f25f-4d1b-88a2-93d457b5cd9a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006320" fbc:label="XFCFBP8418_006320" fbc:name="XFCFBP8418_006320" metaid="_0f69c2e5-0cb7-4548-9fa2-c65083e883d6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020610" fbc:label="XFCFBP8418_020610" fbc:name="XFCFBP8418_020610" metaid="_8decccfa-cdd6-492c-b4ac-1c90ce7d99c2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016490" fbc:label="XFCFBP8418_016490" fbc:name="XFCFBP8418_016490" metaid="f8b75ab3-cda7-425e-88b7-974d3b1d782e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008630" fbc:label="XFCFBP8418_008630" fbc:name="XFCFBP8418_008630" metaid="c4694492-6b9e-4753-9039-0e6e17472385"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010940" fbc:label="XFCFBP8418_010940" fbc:name="XFCFBP8418_010940" metaid="afbb170f-7b66-4c7c-9b7d-eedbbb275c7d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025070" fbc:label="XFCFBP8418_025070" fbc:name="XFCFBP8418_025070" metaid="_919a25fb-86e7-4893-aead-cfc3faf0f516"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005240" fbc:label="XFCFBP8418_005240" fbc:name="XFCFBP8418_005240" metaid="_594fb251-22ad-4721-8e30-c13058bd8a19"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006450" fbc:label="XFCFBP8418_006450" fbc:name="XFCFBP8418_006450" metaid="_6657ff9a-c7bd-483b-bc30-61176aa3fcf9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009840" fbc:label="XFCFBP8418_009840" fbc:name="XFCFBP8418_009840" metaid="b38da076-ea7e-4fee-942e-1e115f77e188"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006690" fbc:label="XFCFBP8418_006690" fbc:name="XFCFBP8418_006690" metaid="_89e6034a-0b00-4085-9bc9-c8fad83b14ae"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004150" fbc:label="XFCFBP8418_004150" fbc:name="XFCFBP8418_004150" metaid="e1993338-5c48-4735-be96-ca72c9e2bd51"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010700" fbc:label="XFCFBP8418_010700" fbc:name="XFCFBP8418_010700" metaid="aae55b2b-ff2b-4458-8f35-5111cd991aef"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007540" fbc:label="XFCFBP8418_007540" fbc:name="XFCFBP8418_007540" metaid="_0b1f3fe0-0f3a-4e4d-94e3-49f6013e12bc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008750" fbc:label="XFCFBP8418_008750" fbc:name="XFCFBP8418_008750" metaid="_92ac0bb5-8967-48b9-b258-b0320fad67c3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020760" fbc:label="XFCFBP8418_020760" fbc:name="XFCFBP8418_020760" metaid="e4e91f0e-5dbd-4d2e-a07f-32e1ab0c8b05"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019770" fbc:label="XFCFBP8418_019770" fbc:name="XFCFBP8418_019770" metaid="_68208f5e-2aa8-4ca8-9d85-ac7df1b78bbe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018680" fbc:label="XFCFBP8418_018680" fbc:name="XFCFBP8418_018680" metaid="aaafcae3-a92d-418d-b6b6-e22155723b99"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016380" fbc:label="XFCFBP8418_016380" fbc:name="XFCFBP8418_016380" metaid="_8cf5363c-89dc-42f6-b0c4-5e34a6457774"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026070" fbc:label="XFCFBP8418_026070" fbc:name="XFCFBP8418_026070" metaid="_6e4eeaf4-9d68-4e94-8678-4036116fe4e6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006340" fbc:label="XFCFBP8418_006340" fbc:name="XFCFBP8418_006340" metaid="_9f842e28-0a67-40ff-81e1-1ffa7ffb3d59"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005250" fbc:label="XFCFBP8418_005250" fbc:name="XFCFBP8418_005250" metaid="_7fafe3d6-bf37-41b1-9f59-f53f0fad0651"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006460" fbc:label="XFCFBP8418_006460" fbc:name="XFCFBP8418_006460" metaid="_7b830632-6a38-430f-a32c-2db897364b1a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004160" fbc:label="XFCFBP8418_004160" fbc:name="XFCFBP8418_004160" metaid="_3c80f6b6-f069-4848-80e3-6dffea0f1062"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003190" fbc:label="XFCFBP8418_003190" fbc:name="XFCFBP8418_003190" metaid="_1b137cb7-6c5a-4349-96a0-d420833c706f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011800" fbc:label="XFCFBP8418_011800" fbc:name="XFCFBP8418_011800" metaid="_1fae67de-c17a-4cd9-b708-c20e51b969ef"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010710" fbc:label="XFCFBP8418_010710" fbc:name="XFCFBP8418_010710" metaid="f061abf5-9d26-445b-bfe8-59e2129c1922"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009850" fbc:label="XFCFBP8418_009850" fbc:name="XFCFBP8418_009850" metaid="_4fb7859d-b172-4d26-b3aa-326ee9096ab3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007430" fbc:label="XFCFBP8418_007430" fbc:name="XFCFBP8418_007430" metaid="_1f26e597-9a70-4f92-84ba-39191c93afda"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019420" fbc:label="XFCFBP8418_019420" fbc:name="XFCFBP8418_019420" metaid="_7081cc1c-5b60-41d4-90f9-41029a380e95"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020870" fbc:label="XFCFBP8418_020870" fbc:name="XFCFBP8418_020870" metaid="f82e510d-5340-4f99-8dd4-13183c24e7e6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019540" fbc:label="XFCFBP8418_019540" fbc:name="XFCFBP8418_019540" metaid="_0b521de4-6233-4a6f-8738-6f5ed693116c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020630" fbc:label="XFCFBP8418_020630" fbc:name="XFCFBP8418_020630" metaid="_5cb7052c-9845-4644-9f1d-54472ccd9cb9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021600" fbc:label="XFCFBP8418_021600" fbc:name="XFCFBP8418_021600" metaid="_4a77ef08-5eb5-4b35-8599-c57d2cbe915d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023900" fbc:label="XFCFBP8418_023900" fbc:name="XFCFBP8418_023900" metaid="d36609da-fe5c-426d-a25b-afeb04ced854"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026060" fbc:label="XFCFBP8418_026060" fbc:name="XFCFBP8418_026060" metaid="_37b08f58-f025-4a9c-96bd-251ac8feab05"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010720" fbc:label="XFCFBP8418_010720" fbc:name="XFCFBP8418_010720" metaid="_80df5172-3034-409e-889e-ee735d0b2f74"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006350" fbc:label="XFCFBP8418_006350" fbc:name="XFCFBP8418_006350" metaid="_8d1d4f6b-10e9-40c7-a999-70dbab00533f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005140" fbc:label="XFCFBP8418_005140" fbc:name="XFCFBP8418_005140" metaid="_315bbb13-9217-488a-ba48-a9e06aa2f7d4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004170" fbc:label="XFCFBP8418_004170" fbc:name="XFCFBP8418_004170" metaid="_196a2b58-c2ab-4123-8f78-8415fabdc0ce"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007680" fbc:label="XFCFBP8418_007680" fbc:name="XFCFBP8418_007680" metaid="_74ac6d8b-8ee1-4242-9078-1ace06a09271"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009740" fbc:label="XFCFBP8418_009740" fbc:name="XFCFBP8418_009740" metaid="_606b92a0-c99c-4fd3-821f-913cb19b2834"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008650" fbc:label="XFCFBP8418_008650" fbc:name="XFCFBP8418_008650" metaid="_8c528a72-6904-4306-b776-bacc7575d741"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020420" fbc:label="XFCFBP8418_020420" fbc:name="XFCFBP8418_020420" metaid="_948c356f-5670-49a7-a619-a01d93770b32"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019430" fbc:label="XFCFBP8418_019430" fbc:name="XFCFBP8418_019430" metaid="cd772af5-958a-46bf-9f17-6184767c639b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023810" fbc:label="XFCFBP8418_023810" fbc:name="XFCFBP8418_023810" metaid="_24cdbdf3-b65e-4a73-a20b-d77815b9039e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021510" fbc:label="XFCFBP8418_021510" fbc:name="XFCFBP8418_021510" metaid="_96bfab54-693a-4df3-b314-05655be54c45"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020300" fbc:label="XFCFBP8418_020300" fbc:name="XFCFBP8418_020300" metaid="c784ff5b-812f-4880-9b25-434b1d34bd97"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024900" fbc:label="XFCFBP8418_024900" fbc:name="XFCFBP8418_024900" metaid="_604bf253-f842-4f66-a9b3-8e39871aa3fe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010980" fbc:label="XFCFBP8418_010980" fbc:name="XFCFBP8418_010980" metaid="_12df8f0d-530f-4745-8b61-73fb8716e1ed"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010730" fbc:label="XFCFBP8418_010730" fbc:name="XFCFBP8418_010730" metaid="_5bd6079d-2813-4c5b-8626-b100c7bb48c9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005030" fbc:label="XFCFBP8418_005030" fbc:name="XFCFBP8418_005030" metaid="e5a389ed-5703-4fac-9f75-1a635598b7cd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010970" fbc:label="XFCFBP8418_010970" fbc:name="XFCFBP8418_010970" metaid="f3875c37-239b-484c-b85c-8e55bdce74de"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004180" fbc:label="XFCFBP8418_004180" fbc:name="XFCFBP8418_004180" metaid="_4e1aa067-4f99-480f-935e-f1e1285b1e93"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004060" fbc:label="XFCFBP8418_004060" fbc:name="XFCFBP8418_004060" metaid="_33ce81d9-d713-416a-bc84-3883ba49e9a2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007690" fbc:label="XFCFBP8418_007690" fbc:name="XFCFBP8418_007690" metaid="d552d0f6-b5df-46dd-b060-adab64b17df5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007450" fbc:label="XFCFBP8418_007450" fbc:name="XFCFBP8418_007450" metaid="b5cae619-084e-4f65-8740-7c7a71bddce6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008660" fbc:label="XFCFBP8418_008660" fbc:name="XFCFBP8418_008660" metaid="_38e8f57e-710b-4f47-b2dc-755bb89b701f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008540" fbc:label="XFCFBP8418_008540" fbc:name="XFCFBP8418_008540" metaid="_8be148fe-bcf2-4ccc-aabc-5f75e34bbbf5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018110" fbc:label="XFCFBP8418_018110" fbc:name="XFCFBP8418_018110" metaid="d8eb045c-aa2e-4bb0-9482-4f314b47c341"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021500" fbc:label="XFCFBP8418_021500" fbc:name="XFCFBP8418_021500" metaid="d22457b3-5d30-4944-a0ee-8890cd8bd090"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019440" fbc:label="XFCFBP8418_019440" fbc:name="XFCFBP8418_019440" metaid="_1b667ba7-0d9a-4aa5-bcee-060670e118d0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019680" fbc:label="XFCFBP8418_019680" fbc:name="XFCFBP8418_019680" metaid="_1b7d9fc1-1ff5-401e-8438-f9f103be05dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010500" fbc:label="XFCFBP8418_010500" fbc:name="XFCFBP8418_010500" metaid="_0e9804e2-a388-414b-bcae-31d1ede34a1f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006010" fbc:label="XFCFBP8418_006010" fbc:name="XFCFBP8418_006010" metaid="ac594632-749a-4d5d-bf72-ea00101a0777"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026080" fbc:label="XFCFBP8418_026080" fbc:name="XFCFBP8418_026080" metaid="df794132-1bf5-4018-8706-912b6a3cd1b5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005040" fbc:label="XFCFBP8418_005040" fbc:name="XFCFBP8418_005040" metaid="_0f0723f9-fc6a-4bd4-8f8d-c05d8958a5b6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004070" fbc:label="XFCFBP8418_004070" fbc:name="XFCFBP8418_004070" metaid="_36045a66-6a4e-4ae1-b2dd-ef5dd2098140"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006490" fbc:label="XFCFBP8418_006490" fbc:name="XFCFBP8418_006490" metaid="eefc0364-4fdb-480d-a33b-400fbecdd031"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012920" fbc:label="XFCFBP8418_012920" fbc:name="XFCFBP8418_012920" metaid="_8dbd1a53-1787-4388-b84e-ee72c038918e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009760" fbc:label="XFCFBP8418_009760" fbc:name="XFCFBP8418_009760" metaid="_2891d25c-6dd3-474d-ab43-fb3a0fb4764d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020780" fbc:label="XFCFBP8418_020780" fbc:name="XFCFBP8418_020780" metaid="fb6b7aeb-42ce-41b5-865a-b98b849b0e15"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021410" fbc:label="XFCFBP8418_021410" fbc:name="XFCFBP8418_021410" metaid="_312e2c57-6ee5-462f-bdde-1a490ecddcb2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020320" fbc:label="XFCFBP8418_020320" fbc:name="XFCFBP8418_020320" metaid="_83978127-3730-4f21-a9f9-1b4e1d949756"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019450" fbc:label="XFCFBP8418_019450" fbc:name="XFCFBP8418_019450" metaid="_921854c4-c6c1-4fa6-8a41-b8dcb1b6325d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018480" fbc:label="XFCFBP8418_018480" fbc:name="XFCFBP8418_018480" metaid="_4c5c44df-e9b4-43c8-a4b6-f84bdd98ce79"/> + <fbc:geneProduct fbc:id="No_Assignment" fbc:label="No_Assignment" fbc:name="No_Assignment" metaid="_0ed9ff45-4a3e-4e47-ba71-ca9272df97ec"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011970" fbc:label="XFCFBP8418_011970" fbc:name="XFCFBP8418_011970" metaid="_1b91fc13-f478-4237-97b7-e0106e05b059"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010510" fbc:label="XFCFBP8418_010510" fbc:name="XFCFBP8418_010510" metaid="_59119fb5-da1d-4fa5-a0ee-16154f252179"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010630" fbc:label="XFCFBP8418_010630" fbc:name="XFCFBP8418_010630" metaid="_2f707fb1-6b67-48d9-a1c5-a6efaea79d71"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011960" fbc:label="XFCFBP8418_011960" fbc:name="XFCFBP8418_011960" metaid="_04a0e1e5-8cef-4ff6-9d15-a76651284298"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005050" fbc:label="XFCFBP8418_005050" fbc:name="XFCFBP8418_005050" metaid="_1f97ade5-3013-4b5e-b48f-6f40ee12e868"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005170" fbc:label="XFCFBP8418_005170" fbc:name="XFCFBP8418_005170" metaid="_636ad1f3-54a0-4a4d-8cf5-3f831be6ddb6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004080" fbc:label="XFCFBP8418_004080" fbc:name="XFCFBP8418_004080" metaid="_1d6f5920-10bb-4d47-ae30-66b94bde5918"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009650" fbc:label="XFCFBP8418_009650" fbc:name="XFCFBP8418_009650" metaid="_24617600-e7e1-485f-a887-f50267208af8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023960" fbc:label="XFCFBP8418_023960" fbc:name="XFCFBP8418_023960" metaid="_7f3b7a06-2db6-4b5d-a91c-3991e1a17b82"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009770" fbc:label="XFCFBP8418_009770" fbc:name="XFCFBP8418_009770" metaid="_4c30e149-d8c5-4281-8738-5e8e77611acd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020330" fbc:label="XFCFBP8418_020330" fbc:name="XFCFBP8418_020330" metaid="e1fb3f61-eeea-4d8a-bbd6-79a9f167ce32"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021660" fbc:label="XFCFBP8418_021660" fbc:name="XFCFBP8418_021660" metaid="_8bd87615-bd4f-4d09-8efa-d30eedaedd7e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020310" fbc:label="XFCFBP8418_020310" fbc:name="XFCFBP8418_020310" metaid="d5f4da41-cb2a-4679-bb3c-37e0b610eb2d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024910" fbc:label="XFCFBP8418_024910" fbc:name="XFCFBP8418_024910" metaid="_746ef16f-af84-4ab5-a434-9e2a7b4ca968"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021520" fbc:label="XFCFBP8418_021520" fbc:name="XFCFBP8418_021520" metaid="_22cd1748-7f2a-4d10-b793-cb80b6dba265"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023820" fbc:label="XFCFBP8418_023820" fbc:name="XFCFBP8418_023820" metaid="dc6c6701-fa42-4432-8443-f90cf7194d7c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020430" fbc:label="XFCFBP8418_020430" fbc:name="XFCFBP8418_020430" metaid="_5875e96e-bde4-461b-8e4e-abb508a2aa59"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019220" fbc:label="XFCFBP8418_019220" fbc:name="XFCFBP8418_019220" metaid="_83ef86ea-346d-411b-bd71-adbb97845ccf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021400" fbc:label="XFCFBP8418_021400" fbc:name="XFCFBP8418_021400" metaid="fcc037b1-dc0c-4666-95d4-d3e6a7b3c189"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000840" fbc:label="XFCFBP8418_000840" fbc:name="XFCFBP8418_000840" metaid="_02c21d2a-4f4c-4680-b376-9d59b93687a8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010890" fbc:label="XFCFBP8418_010890" fbc:name="XFCFBP8418_010890" metaid="_370f87ce-2fc8-4564-a38a-a7b63a26d0ad"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010520" fbc:label="XFCFBP8418_010520" fbc:name="XFCFBP8418_010520" metaid="_97e20af6-179e-4fc3-82da-518ab5dcb275"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005060" fbc:label="XFCFBP8418_005060" fbc:name="XFCFBP8418_005060" metaid="_08e98200-7f30-4cdf-89bb-2838414910a1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004090" fbc:label="XFCFBP8418_004090" fbc:name="XFCFBP8418_004090" metaid="_4226cdaf-5f57-4593-9637-3c7f868133b7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005180" fbc:label="XFCFBP8418_005180" fbc:name="XFCFBP8418_005180" metaid="_0eb13d1d-df41-4e66-bb26-29dd223173ef"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009780" fbc:label="XFCFBP8418_009780" fbc:name="XFCFBP8418_009780" metaid="_5ae9d90d-312e-43f8-b8fa-dc9d46a2b8a8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025910" fbc:label="XFCFBP8418_025910" fbc:name="XFCFBP8418_025910" metaid="_475467d2-f0d2-4849-a40e-3a130532b6a5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024700" fbc:label="XFCFBP8418_024700" fbc:name="XFCFBP8418_024700" metaid="f4c7ba29-b06b-4576-97ee-7068f3379545"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023610" fbc:label="XFCFBP8418_023610" fbc:name="XFCFBP8418_023610" metaid="_3df0f6a6-cd16-42da-9895-27f7de8c80c9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011750" fbc:label="XFCFBP8418_011750" fbc:name="XFCFBP8418_011750" metaid="e33a9bde-ff87-4cdb-a310-55f79c453c32"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011870" fbc:label="XFCFBP8418_011870" fbc:name="XFCFBP8418_011870" metaid="_8ed6c505-d32d-4110-bbb2-155044fdd122"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005070" fbc:label="XFCFBP8418_005070" fbc:name="XFCFBP8418_005070" metaid="_2b68c588-7147-4b11-941f-1e164c762e4e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007370" fbc:label="XFCFBP8418_007370" fbc:name="XFCFBP8418_007370" metaid="_2888a890-6ee7-41bc-b0bd-1ecc430024c9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008580" fbc:label="XFCFBP8418_008580" fbc:name="XFCFBP8418_008580" metaid="f9601fbe-a139-4382-a6f3-2fed5262e5fd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009670" fbc:label="XFCFBP8418_009670" fbc:name="XFCFBP8418_009670" metaid="_2cc4a89b-d8fa-4c02-b6be-11a9049ed033"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009790" fbc:label="XFCFBP8418_009790" fbc:name="XFCFBP8418_009790" metaid="_8b6598ac-52b2-4849-bd4c-c41c66f1b833"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007250" fbc:label="XFCFBP8418_007250" fbc:name="XFCFBP8418_007250" metaid="e18ea72f-3354-4f0a-bacb-dc794905140c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023860" fbc:label="XFCFBP8418_023860" fbc:name="XFCFBP8418_023860" metaid="_1308da9e-231e-4046-bfec-3beb0687f028"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020350" fbc:label="XFCFBP8418_020350" fbc:name="XFCFBP8418_020350" metaid="_59634916-dd72-49f7-a1ad-88e81c53c424"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024950" fbc:label="XFCFBP8418_024950" fbc:name="XFCFBP8418_024950" metaid="a2dbcbdb-b558-428c-a6ad-1cea77c18a9f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022890" fbc:label="XFCFBP8418_022890" fbc:name="XFCFBP8418_022890" metaid="_667fb5d2-263d-4c79-a57a-71ffbc1c20ff"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020230" fbc:label="XFCFBP8418_020230" fbc:name="XFCFBP8418_020230" metaid="_45c430c0-3be6-4fc4-a4fc-c4c229bdbcf4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021440" fbc:label="XFCFBP8418_021440" fbc:name="XFCFBP8418_021440" metaid="_659c097d-3b27-4f6a-87a8-12745eb8e021"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023980" fbc:label="XFCFBP8418_023980" fbc:name="XFCFBP8418_023980" metaid="f9b7fd35-6eed-4c89-b6bc-1d930cca74dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023600" fbc:label="XFCFBP8418_023600" fbc:name="XFCFBP8418_023600" metaid="_2582a0cb-bd4c-410c-aa36-1efe9e4c51bf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024810" fbc:label="XFCFBP8418_024810" fbc:name="XFCFBP8418_024810" metaid="_304e1ca4-bf8f-4e5e-b853-d713ba7b6566"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020210" fbc:label="XFCFBP8418_020210" fbc:name="XFCFBP8418_020210" metaid="_81c41356-592c-45bf-b773-691e7cd204a5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021420" fbc:label="XFCFBP8418_021420" fbc:name="XFCFBP8418_021420" metaid="e4104578-60bf-4ba1-99ba-185bfa8a11c3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023840" fbc:label="XFCFBP8418_023840" fbc:name="XFCFBP8418_023840" metaid="_78a41df0-b0af-431e-a9b0-c087e2487184"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019240" fbc:label="XFCFBP8418_019240" fbc:name="XFCFBP8418_019240" metaid="_56cd2a82-a317-4d21-b378-b50c00f05a51"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018150" fbc:label="XFCFBP8418_018150" fbc:name="XFCFBP8418_018150" metaid="ce418af6-1f89-42ae-9f27-7049d7f34739"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000740" fbc:label="XFCFBP8418_000740" fbc:name="XFCFBP8418_000740" metaid="_9cb2b8c2-d5c7-4367-96a9-04949af50168"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002800" fbc:label="XFCFBP8418_002800" fbc:name="XFCFBP8418_002800" metaid="_2bb26670-3c46-4815-a7b9-91018dfb7664"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011760" fbc:label="XFCFBP8418_011760" fbc:name="XFCFBP8418_011760" metaid="_540d429f-ffbf-4766-8abe-a498596d8410"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010550" fbc:label="XFCFBP8418_010550" fbc:name="XFCFBP8418_010550" metaid="_53aee272-92c2-4dbd-b569-3ee2f6c2d4d7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010420" fbc:label="XFCFBP8418_010420" fbc:name="XFCFBP8418_010420" metaid="b4e8263c-e6a3-4f37-93f7-6ea7256a1fe7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012840" fbc:label="XFCFBP8418_012840" fbc:name="XFCFBP8418_012840" metaid="_9713f688-1d6c-4c9c-bb16-8e69349c7811"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006050" fbc:label="XFCFBP8418_006050" fbc:name="XFCFBP8418_006050" metaid="ee9bb37a-2e13-4b0e-a470-af5665a6561b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007260" fbc:label="XFCFBP8418_007260" fbc:name="XFCFBP8418_007260" metaid="_6a725864-6d79-42d5-a6ea-de73e4994260"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000870" fbc:label="XFCFBP8418_000870" fbc:name="XFCFBP8418_000870" metaid="ae943569-771e-4dcc-9448-5faf24e54e20"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007140" fbc:label="XFCFBP8418_007140" fbc:name="XFCFBP8418_007140" metaid="_4f80c0f6-6a6e-410b-95ae-db278dc082c2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020460" fbc:label="XFCFBP8418_020460" fbc:name="XFCFBP8418_020460" metaid="b269bb85-c15a-4226-9d74-b0da03c2460c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023970" fbc:label="XFCFBP8418_023970" fbc:name="XFCFBP8418_023970" metaid="fe0b616c-cc44-4084-bcf1-f7bcd381b85a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021670" fbc:label="XFCFBP8418_021670" fbc:name="XFCFBP8418_021670" metaid="_51a38aeb-3bb3-4ca0-b1b7-a0a059eb8f29"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020220" fbc:label="XFCFBP8418_020220" fbc:name="XFCFBP8418_020220" metaid="df8f75d9-575c-4824-a335-27a078caea48"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021550" fbc:label="XFCFBP8418_021550" fbc:name="XFCFBP8418_021550" metaid="a2c65090-c229-41f0-ad8d-2b085b1f63b2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024720" fbc:label="XFCFBP8418_024720" fbc:name="XFCFBP8418_024720" metaid="d3fe1ce0-0b54-400e-bfc3-aaee6d17b206"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002810" fbc:label="XFCFBP8418_002810" fbc:name="XFCFBP8418_002810" metaid="_84869037-8ec9-46f7-9fa8-a95942e9648c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001720" fbc:label="XFCFBP8418_001720" fbc:name="XFCFBP8418_001720" metaid="b98edc71-0135-470e-aa18-a2fce5e65f5a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019130" fbc:label="XFCFBP8418_019130" fbc:name="XFCFBP8418_019130" metaid="_68278259-e9cf-4818-aaab-6a8c64ded20f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003900" fbc:label="XFCFBP8418_003900" fbc:name="XFCFBP8418_003900" metaid="_7261e30e-88b3-4dd3-9540-e00fe7f02b4e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002930" fbc:label="XFCFBP8418_002930" fbc:name="XFCFBP8418_002930" metaid="d35389bb-235c-4fb5-84f0-1ac11a471282"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005090" fbc:label="XFCFBP8418_005090" fbc:name="XFCFBP8418_005090" metaid="_21668add-865b-45dc-b108-47bbb270a5b7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010560" fbc:label="XFCFBP8418_010560" fbc:name="XFCFBP8418_010560" metaid="_00851fba-7766-4aa3-82ce-cb42dc3ab20d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011400" fbc:label="XFCFBP8418_011400" fbc:name="XFCFBP8418_011400" metaid="bdc808ce-ef7e-4aa7-948b-2bb08064502c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000880" fbc:label="XFCFBP8418_000880" fbc:name="XFCFBP8418_000880" metaid="bbd65aa5-4023-4264-a843-05931444de15"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007390" fbc:label="XFCFBP8418_007390" fbc:name="XFCFBP8418_007390" metaid="_8796c952-3c3d-4a86-875b-4d6dfd5bf7b8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009690" fbc:label="XFCFBP8418_009690" fbc:name="XFCFBP8418_009690" metaid="_8651f10d-8c78-401b-a631-28224fd086f3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022790" fbc:label="XFCFBP8418_022790" fbc:name="XFCFBP8418_022790" metaid="_5cd0d8a1-56e8-49fc-82ae-08e3a2914795"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007150" fbc:label="XFCFBP8418_007150" fbc:name="XFCFBP8418_007150" metaid="ba678625-3a88-4038-b3a6-6462c52c3c0c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020370" fbc:label="XFCFBP8418_020370" fbc:name="XFCFBP8418_020370" metaid="fed7b3eb-14e6-4681-8066-eebf749185be"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000640" fbc:label="XFCFBP8418_000640" fbc:name="XFCFBP8418_000640" metaid="_93cfb692-6747-4a2d-a336-2706da4ae00c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021340" fbc:label="XFCFBP8418_021340" fbc:name="XFCFBP8418_021340" metaid="_2052b095-41cd-4f2e-a130-2b1a7c775199"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023640" fbc:label="XFCFBP8418_023640" fbc:name="XFCFBP8418_023640" metaid="_6403aadf-5dae-4528-aa38-3653f56604c4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025940" fbc:label="XFCFBP8418_025940" fbc:name="XFCFBP8418_025940" metaid="b97d2453-ca18-4750-91cf-b1e3855125a7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021460" fbc:label="XFCFBP8418_021460" fbc:name="XFCFBP8418_021460" metaid="_07bdb74c-b4af-4839-b8c6-73a56eb75283"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020250" fbc:label="XFCFBP8418_020250" fbc:name="XFCFBP8418_020250" metaid="_4c865f57-950b-4a33-bc94-3cc27545bd9b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024850" fbc:label="XFCFBP8418_024850" fbc:name="XFCFBP8418_024850" metaid="dc13366f-1cbb-4c3f-b4f1-0ce27a394e13"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021100" fbc:label="XFCFBP8418_021100" fbc:name="XFCFBP8418_021100" metaid="_9c2658a4-3484-4dfd-af5d-59e003a3665d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021200" fbc:label="XFCFBP8418_021200" fbc:name="XFCFBP8418_021200" metaid="_87fd6306-7708-4fdb-be14-4666ca52c481"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023620" fbc:label="XFCFBP8418_023620" fbc:name="XFCFBP8418_023620" metaid="e2e046e2-96dd-44b9-a7e1-98c0cf480c61"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024710" fbc:label="XFCFBP8418_024710" fbc:name="XFCFBP8418_024710" metaid="_5f88ddca-d60a-4190-8aac-ce1ad01dd75e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024830" fbc:label="XFCFBP8418_024830" fbc:name="XFCFBP8418_024830" metaid="_34a98f14-e1cf-43b0-b988-2eea4b49cf16"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002940" fbc:label="XFCFBP8418_002940" fbc:name="XFCFBP8418_002940" metaid="_314c13ce-b352-434e-93ac-bcb4d4b963ce"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002700" fbc:label="XFCFBP8418_002700" fbc:name="XFCFBP8418_002700" metaid="_277aaac0-c8ec-4dc5-8cd4-833e612b1d46"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012870" fbc:label="XFCFBP8418_012870" fbc:name="XFCFBP8418_012870" metaid="_00eff5db-5e5d-4291-80a4-a59028fdcc65"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010210" fbc:label="XFCFBP8418_010210" fbc:name="XFCFBP8418_010210" metaid="_63e5a0fd-eac2-41a2-9b70-c4c288f58cfb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010570" fbc:label="XFCFBP8418_010570" fbc:name="XFCFBP8418_010570" metaid="d2e24758-a3b3-48e3-b608-c6bb3282a7a2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012500" fbc:label="XFCFBP8418_012500" fbc:name="XFCFBP8418_012500" metaid="_948ac07a-77ac-4d92-9ca7-ba3805401292"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000770" fbc:label="XFCFBP8418_000770" fbc:name="XFCFBP8418_000770" metaid="_4fcace10-bfae-4c85-9d53-ba3f463cc87c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007280" fbc:label="XFCFBP8418_007280" fbc:name="XFCFBP8418_007280" metaid="a5a2cfcf-3d74-49f8-a131-92a01cb20d85"/> + <fbc:geneProduct fbc:id="No_Assignment2" fbc:label="No_Assignment2" fbc:name="No_Assignment2" metaid="_8e363e90-8dd0-48ec-939d-fd11b66afd23"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002950" fbc:label="XFCFBP8418_002950" fbc:name="XFCFBP8418_002950" metaid="e310f09e-0504-49ed-9686-cb7974f90360"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000890" fbc:label="XFCFBP8418_000890" fbc:name="XFCFBP8418_000890" metaid="f3a66ad4-0f37-4214-af9e-873fb61180ae"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000650" fbc:label="XFCFBP8418_000650" fbc:name="XFCFBP8418_000650" metaid="_406baabf-1904-435e-8d50-a3f80917dc11"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020240" fbc:label="XFCFBP8418_020240" fbc:name="XFCFBP8418_020240" metaid="_0c8de81c-d16e-4b97-a9b6-c3607249d9f4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024840" fbc:label="XFCFBP8418_024840" fbc:name="XFCFBP8418_024840" metaid="_8051e251-c17f-4afb-8eca-c109de14e8ab"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021450" fbc:label="XFCFBP8418_021450" fbc:name="XFCFBP8418_021450" metaid="efe0556b-406c-4fa9-9711-5ccb60cbf071"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020360" fbc:label="XFCFBP8418_020360" fbc:name="XFCFBP8418_020360" metaid="f4a0c5ca-0c55-4756-9363-e20f1571335a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023630" fbc:label="XFCFBP8418_023630" fbc:name="XFCFBP8418_023630" metaid="_008e1dc3-fb8e-488e-a846-4f4279d34023"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021330" fbc:label="XFCFBP8418_021330" fbc:name="XFCFBP8418_021330" metaid="_0f6b9dfd-583f-45bb-a29f-11c56c7f9adf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025955" fbc:label="XFCFBP8418_025955" fbc:name="XFCFBP8418_025955" metaid="_2510c364-65af-4b29-9327-480ab2698c2a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025954" fbc:label="XFCFBP8418_025954" fbc:name="XFCFBP8418_025954" metaid="_2a764f49-ed4e-44e0-b1b8-8d5e71381e43"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025953" fbc:label="XFCFBP8418_025953" fbc:name="XFCFBP8418_025953" metaid="b8461f30-8f52-4b71-8391-da4dc64f2d0c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025952" fbc:label="XFCFBP8418_025952" fbc:name="XFCFBP8418_025952" metaid="_50f1558b-73da-42e8-b699-9d7310cbbb51"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002710" fbc:label="XFCFBP8418_002710" fbc:name="XFCFBP8418_002710" metaid="afeead46-196c-41f0-8523-7e2b923e69cd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026800" fbc:label="XFCFBP8418_026800" fbc:name="XFCFBP8418_026800" metaid="dbf6c5b5-44c9-48e6-9d70-ea475cdd1199"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025958" fbc:label="XFCFBP8418_025958" fbc:name="XFCFBP8418_025958" metaid="_467fc7a3-cd2b-4951-8ea0-6f63d2a1ddf9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025957" fbc:label="XFCFBP8418_025957" fbc:name="XFCFBP8418_025957" metaid="_0902a677-7145-4813-a942-c8ae796e98dd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025956" fbc:label="XFCFBP8418_025956" fbc:name="XFCFBP8418_025956" metaid="_07361964-2dad-43dc-95cf-0f8fa4f8b3a9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011310" fbc:label="XFCFBP8418_011310" fbc:name="XFCFBP8418_011310" metaid="_7f4e2541-cd59-4021-a6b6-a802bec70fda"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010100" fbc:label="XFCFBP8418_010100" fbc:name="XFCFBP8418_010100" metaid="_9ade6ec5-abdf-465e-8567-efdec1fe52c2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010460" fbc:label="XFCFBP8418_010460" fbc:name="XFCFBP8418_010460" metaid="_3dbee0f8-d99b-4c7a-9f29-baa695e8ec96"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011300" fbc:label="XFCFBP8418_011300" fbc:name="XFCFBP8418_011300" metaid="f9db817f-f54b-4915-aaeb-056c873377ab"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014810" fbc:label="XFCFBP8418_014810" fbc:name="XFCFBP8418_014810" metaid="_5c0e842c-8662-46d3-834e-0aa4f727ac28"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014930" fbc:label="XFCFBP8418_014930" fbc:name="XFCFBP8418_014930" metaid="_5cd53500-3e68-42b3-ba5e-be6727e9e3da"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002960" fbc:label="XFCFBP8418_002960" fbc:name="XFCFBP8418_002960" metaid="_7507c197-902d-4cca-b659-2f51d38d16ec"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024990" fbc:label="XFCFBP8418_024990" fbc:name="XFCFBP8418_024990" metaid="ea25cde0-a257-4bf1-8f3e-491882c2c1a5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000660" fbc:label="XFCFBP8418_000660" fbc:name="XFCFBP8418_000660" metaid="_6140e34e-fc05-4a84-93dd-068f68f67d35"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020390" fbc:label="XFCFBP8418_020390" fbc:name="XFCFBP8418_020390" metaid="_498dbc10-e664-4f33-873e-e8fb28cfe1ac"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022570" fbc:label="XFCFBP8418_022570" fbc:name="XFCFBP8418_022570" metaid="ca931cb3-d635-403d-8de1-ce1a4e6a65f2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000540" fbc:label="XFCFBP8418_000540" fbc:name="XFCFBP8418_000540" metaid="_590f01b9-c2a6-4582-a03c-13e611a65ac4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020270" fbc:label="XFCFBP8418_020270" fbc:name="XFCFBP8418_020270" metaid="_56424929-6d76-4722-b9cb-e9f6ca8a0e1e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021480" fbc:label="XFCFBP8418_021480" fbc:name="XFCFBP8418_021480" metaid="e53ead2b-3062-40d5-9da2-b181ec3ee075"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025720" fbc:label="XFCFBP8418_025720" fbc:name="XFCFBP8418_025720" metaid="b5d02b4f-cf01-4af7-b30b-8954cbb5ef9b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021120" fbc:label="XFCFBP8418_021120" fbc:name="XFCFBP8418_021120" metaid="_7d1b223e-d9ca-4b53-9815-fd36e363e10a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025700" fbc:label="XFCFBP8418_025700" fbc:name="XFCFBP8418_025700" metaid="e58bd30e-51ed-423b-b7b6-3a67224e5c9c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024610" fbc:label="XFCFBP8418_024610" fbc:name="XFCFBP8418_024610" metaid="_97b3a2e2-3844-4863-89df-fa744b396ea2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004900" fbc:label="XFCFBP8418_004900" fbc:name="XFCFBP8418_004900" metaid="b3fe439f-2a72-4b94-8144-f1a190757884"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001510" fbc:label="XFCFBP8418_001510" fbc:name="XFCFBP8418_001510" metaid="f2b27bd0-4015-4e77-a451-433eb07a277d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002720" fbc:label="XFCFBP8418_002720" fbc:name="XFCFBP8418_002720" metaid="afaebac6-4c6e-44ef-a400-45a1ec547edf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003930" fbc:label="XFCFBP8418_003930" fbc:name="XFCFBP8418_003930" metaid="_27a00736-0056-4811-b748-da93597da211"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007180" fbc:label="XFCFBP8418_007180" fbc:name="XFCFBP8418_007180" metaid="_6a021a4e-6654-4d2e-9597-33dd6c250590"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010590" fbc:label="XFCFBP8418_010590" fbc:name="XFCFBP8418_010590" metaid="f622a452-ef10-405b-95bc-65030e6ce73b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012410" fbc:label="XFCFBP8418_012410" fbc:name="XFCFBP8418_012410" metaid="ebf42e22-08b3-44f6-b0d2-5d28ad7ece09"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011560" fbc:label="XFCFBP8418_011560" fbc:name="XFCFBP8418_011560" metaid="_1a49c128-8e75-447f-a9df-604c97544f9f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012890" fbc:label="XFCFBP8418_012890" fbc:name="XFCFBP8418_012890" metaid="e85f0bed-15d1-4532-8cf3-71e176908aa1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015910" fbc:label="XFCFBP8418_015910" fbc:name="XFCFBP8418_015910" metaid="ed7a7c0a-54d3-4ac9-87b9-2d86fa34484d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018190" fbc:label="XFCFBP8418_018190" fbc:name="XFCFBP8418_018190" metaid="_3ab57745-8839-4535-9774-2f414b621847"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000550" fbc:label="XFCFBP8418_000550" fbc:name="XFCFBP8418_000550" metaid="_84cbfa1f-8717-4f59-b76c-89a00672f284"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003940" fbc:label="XFCFBP8418_003940" fbc:name="XFCFBP8418_003940" metaid="_6a6260df-88fc-4943-b58c-7ab73144c684"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020260" fbc:label="XFCFBP8418_020260" fbc:name="XFCFBP8418_020260" metaid="_650b8eb5-a277-4571-969c-e2d795274c1d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000310" fbc:label="XFCFBP8418_000310" fbc:name="XFCFBP8418_000310" metaid="d706cce0-32a1-460b-99a0-fc4efe743362"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020380" fbc:label="XFCFBP8418_020380" fbc:name="XFCFBP8418_020380" metaid="b93a2dda-8d07-49f2-b567-73b0b247aab2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025951" fbc:label="XFCFBP8418_025951" fbc:name="XFCFBP8418_025951" metaid="_917de50d-484b-4fbd-808e-eaab63dc70ea"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024620" fbc:label="XFCFBP8418_024620" fbc:name="XFCFBP8418_024620" metaid="_0a3a0461-0e56-42df-a65a-66d1474598ba"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021350" fbc:label="XFCFBP8418_021350" fbc:name="XFCFBP8418_021350" metaid="f56b2db6-3c3b-447e-aff0-d0bfada5e9bb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025950" fbc:label="XFCFBP8418_025950" fbc:name="XFCFBP8418_025950" metaid="_839d0956-c541-4c16-a189-ddf49c2b73b8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022200" fbc:label="XFCFBP8418_022200" fbc:name="XFCFBP8418_022200" metaid="_6e2ef2e2-87cc-4204-9b03-3468ccd9c1cf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022440" fbc:label="XFCFBP8418_022440" fbc:name="XFCFBP8418_022440" metaid="_50e113d8-85e4-4fc0-acc4-0f3f34e201b9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023650" fbc:label="XFCFBP8418_023650" fbc:name="XFCFBP8418_023650" metaid="a340789e-eadf-4143-8036-4bfa77ab5427"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027910" fbc:label="XFCFBP8418_027910" fbc:name="XFCFBP8418_027910" metaid="be56024a-5bf2-4c03-af07-284640fe986c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002610" fbc:label="XFCFBP8418_002610" fbc:name="XFCFBP8418_002610" metaid="f31c8e11-1f57-4f35-874a-aed02384039f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003820" fbc:label="XFCFBP8418_003820" fbc:name="XFCFBP8418_003820" metaid="_4c641716-3197-4c6c-88c2-70d02fdac033"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003700" fbc:label="XFCFBP8418_003700" fbc:name="XFCFBP8418_003700" metaid="cefafbb4-cf34-4bac-81e5-48ff7ba8bb13"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012420" fbc:label="XFCFBP8418_012420" fbc:name="XFCFBP8418_012420" metaid="_603cf11e-581f-4cdf-b40d-5efa5c521c70"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015800" fbc:label="XFCFBP8418_015800" fbc:name="XFCFBP8418_015800" metaid="_5bc53423-801f-4eee-a2d2-e0e9a5fc38ac"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023680" fbc:label="XFCFBP8418_023680" fbc:name="XFCFBP8418_023680" metaid="_1c400afd-fa07-4503-b396-8342e4df3da4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024890" fbc:label="XFCFBP8418_024890" fbc:name="XFCFBP8418_024890" metaid="_9906003f-f637-460b-94dd-49d0fd8f1412"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003830" fbc:label="XFCFBP8418_003830" fbc:name="XFCFBP8418_003830" metaid="_40b6881b-0254-4e6a-b405-88f154c7c88f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020290" fbc:label="XFCFBP8418_020290" fbc:name="XFCFBP8418_020290" metaid="_535864cd-959e-4774-9223-c15d6aabcbbb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022350" fbc:label="XFCFBP8418_022350" fbc:name="XFCFBP8418_022350" metaid="c3090db3-18ef-4a11-a59c-ade326279ed0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000560" fbc:label="XFCFBP8418_000560" fbc:name="XFCFBP8418_000560" metaid="_8267f696-7d64-49a5-a848-c51985ead21f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001410" fbc:label="XFCFBP8418_001410" fbc:name="XFCFBP8418_001410" metaid="_4f2d4b24-9245-4340-8737-08e224233711"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002620" fbc:label="XFCFBP8418_002620" fbc:name="XFCFBP8418_002620" metaid="c9ae4702-1c8f-463b-9b93-6494cc3fb943"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000200" fbc:label="XFCFBP8418_000200" fbc:name="XFCFBP8418_000200" metaid="_1fc18107-28d7-4410-ad80-ac0b162f9acd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026710" fbc:label="XFCFBP8418_026710" fbc:name="XFCFBP8418_026710" metaid="_7269de46-bb60-45cb-807a-2b0f02a25827"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025620" fbc:label="XFCFBP8418_025620" fbc:name="XFCFBP8418_025620" metaid="da8961d8-d5da-41be-8c16-78f832e84d57"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024530" fbc:label="XFCFBP8418_024530" fbc:name="XFCFBP8418_024530" metaid="_4de0b22d-dfbc-44d2-9212-fd9e10c362e9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022230" fbc:label="XFCFBP8418_022230" fbc:name="XFCFBP8418_022230" metaid="d9f45082-09b9-44cc-b883-84d3d91433ad"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025600" fbc:label="XFCFBP8418_025600" fbc:name="XFCFBP8418_025600" metaid="_159aaf1f-8e50-4419-b270-063093843d22"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027900" fbc:label="XFCFBP8418_027900" fbc:name="XFCFBP8418_027900" metaid="f31ebb15-359b-44d2-b526-c206333fbe7a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003710" fbc:label="XFCFBP8418_003710" fbc:name="XFCFBP8418_003710" metaid="ad1ac4df-7fb0-477d-9d7d-f876ee5bc703"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004800" fbc:label="XFCFBP8418_004800" fbc:name="XFCFBP8418_004800" metaid="e744a5a8-80e0-4d7c-b4b5-2af34160afff"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015820" fbc:label="XFCFBP8418_015820" fbc:name="XFCFBP8418_015820" metaid="_2f4de6cb-ec12-47c2-a7a9-747ceb6c19a5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015810" fbc:label="XFCFBP8418_015810" fbc:name="XFCFBP8418_015810" metaid="b245e80f-6458-49f1-9009-9b7fcef1a2aa"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021490" fbc:label="XFCFBP8418_021490" fbc:name="XFCFBP8418_021490" metaid="_61f06b9f-4f2f-4dc2-aa3a-283b75342f7d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020280" fbc:label="XFCFBP8418_020280" fbc:name="XFCFBP8418_020280" metaid="b12d91f1-12f5-49d4-b015-23327225f3e7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024880" fbc:label="XFCFBP8418_024880" fbc:name="XFCFBP8418_024880" metaid="ede3afb3-b595-4b1a-b24a-aebdec76686f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000330" fbc:label="XFCFBP8418_000330" fbc:name="XFCFBP8418_000330" metaid="_010446bc-b586-4f68-b476-f83d3161074d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019180" fbc:label="XFCFBP8418_019180" fbc:name="XFCFBP8418_019180" metaid="c212ab48-5a0f-44da-8fb5-bef9457ee71e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004930" fbc:label="XFCFBP8418_004930" fbc:name="XFCFBP8418_004930" metaid="_24b7d05a-8ede-4c88-b495-1fac9a7f07cc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001660" fbc:label="XFCFBP8418_001660" fbc:name="XFCFBP8418_001660" metaid="_903991ca-34cc-4199-934e-a125ee6f0d23"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023670" fbc:label="XFCFBP8418_023670" fbc:name="XFCFBP8418_023670" metaid="_08bd99a0-2c63-472f-9af6-64f88dd41224"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003720" fbc:label="XFCFBP8418_003720" fbc:name="XFCFBP8418_003720" metaid="_701e8f64-369b-4e8e-bb01-ac2834eb8084"/> + <fbc:geneProduct fbc:id="XFCFBP9418_023100" fbc:label="XFCFBP9418_023100" fbc:name="XFCFBP9418_023100" metaid="ad6c8faf-aeaf-474c-9732-382b4d8b01a4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002510" fbc:label="XFCFBP8418_002510" fbc:name="XFCFBP8418_002510" metaid="_0631785a-f615-4b80-bdf7-e6a914e0ca08"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002870" fbc:label="XFCFBP8418_002870" fbc:name="XFCFBP8418_002870" metaid="_277f51db-54d5-4447-ae5a-e724ada639ce"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025610" fbc:label="XFCFBP8418_025610" fbc:name="XFCFBP8418_025610" metaid="b2a3f5bd-9cfe-4793-98e9-9457deb2243e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025730" fbc:label="XFCFBP8418_025730" fbc:name="XFCFBP8418_025730" metaid="_138c3720-23d1-45ae-b490-a116ee2c7d45"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021130" fbc:label="XFCFBP8418_021130" fbc:name="XFCFBP8418_021130" metaid="_209f7951-2857-40c7-9116-4b337d6b5d85"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024520" fbc:label="XFCFBP8418_024520" fbc:name="XFCFBP8418_024520" metaid="_2d645272-561c-4c94-83e2-6b75891d65c9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024640" fbc:label="XFCFBP8418_024640" fbc:name="XFCFBP8418_024640" metaid="b45c7fec-afbe-4ed8-a1eb-f0f31285c699"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024760" fbc:label="XFCFBP8418_024760" fbc:name="XFCFBP8418_024760" metaid="f21039d0-00e1-4550-b83b-9fc77c59163d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022220" fbc:label="XFCFBP8418_022220" fbc:name="XFCFBP8418_022220" metaid="_85236683-afe2-4b02-b931-7e34fe65e20e"/> + </fbc:listOfGeneProducts> + <groups:listOfGroups> + <groups:group groups:id="Pyruvate_Metabolism" groups:kind="classification" groups:name="Pyruvate_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_OAADC"/> + <groups:member groups:idRef="R_ACS"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glycolysis_Gluconeogenesis" groups:kind="classification" groups:name="Glycolysis_Gluconeogenesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PGM"/> + <groups:member groups:idRef="R_PFK"/> + <groups:member groups:idRef="R_FBP"/> + <groups:member groups:idRef="R_PGK"/> + <groups:member groups:idRef="R_PDH"/> + <groups:member groups:idRef="R_PPS"/> + <groups:member groups:idRef="R_HEX1"/> + <groups:member groups:idRef="R_PGI"/> + <groups:member groups:idRef="R_TPI"/> + <groups:member groups:idRef="R_GAPD"/> + <groups:member groups:idRef="R_ENO"/> + <groups:member groups:idRef="R_FBA"/> + <groups:member groups:idRef="R_PYK"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="tRNA_Charging" groups:kind="classification" groups:name="tRNA_Charging"> + <groups:listOfMembers> + <groups:member groups:idRef="R_TRPTRS"/> + <groups:member groups:idRef="R_THRTRS"/> + <groups:member groups:idRef="R_TYRTRS"/> + <groups:member groups:idRef="R_ALATRS"/> + <groups:member groups:idRef="R_SERTRS"/> + <groups:member groups:idRef="R_HISTRS"/> + <groups:member groups:idRef="R_PROTRS"/> + <groups:member groups:idRef="R_VALTRS"/> + <groups:member groups:idRef="R_ARGTRS"/> + <groups:member groups:idRef="R_METTRS"/> + <groups:member groups:idRef="R_LYSTRS"/> + <groups:member groups:idRef="R_ILETRS"/> + <groups:member groups:idRef="R_LEUTRS"/> + <groups:member groups:idRef="R_GLNTRS"/> + <groups:member groups:idRef="R_ASPTRS"/> + <groups:member groups:idRef="R_CYSTRS"/> + <groups:member groups:idRef="R_ASNTRS"/> + <groups:member groups:idRef="R_SERTRS2"/> + <groups:member groups:idRef="R_FMETTRS"/> + <groups:member groups:idRef="R_GLUTRS"/> + <groups:member groups:idRef="R_GLUTRR"/> + <groups:member groups:idRef="R_PHETRS"/> + <groups:member groups:idRef="R_GLYTRS"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Electron_transfer" groups:kind="classification" groups:name="Electron_transfer"> + <groups:listOfMembers> + <groups:member groups:idRef="R_DSBDR"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Citric_Acid_Cycle" groups:kind="classification" groups:name="Citric_Acid_Cycle"> + <groups:listOfMembers> + <groups:member groups:idRef="R_MDH2"/> + <groups:member groups:idRef="R_SUCD1"/> + <groups:member groups:idRef="R_AKGDH"/> + <groups:member groups:idRef="R_ICDHyr2"/> + <groups:member groups:idRef="R_ICDHyr1"/> + <groups:member groups:idRef="R_CS"/> + <groups:member groups:idRef="R_MDH"/> + <groups:member groups:idRef="R_ACONTa"/> + <groups:member groups:idRef="R_ACONTb"/> + <groups:member groups:idRef="R_SUCOAS"/> + <groups:member groups:idRef="R_FUM"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Superoxide_radicals_degradation" groups:kind="classification" groups:name="Superoxide_radicals_degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_CAT"/> + <groups:member groups:idRef="R_GTHPe"/> + <groups:member groups:idRef="R_THIORDXi"/> + <groups:member groups:idRef="R_GTHP"/> + <groups:member groups:idRef="R_SPODM"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Purine_and_Pyrimidine_Biosynthesis" groups:kind="classification" groups:name="Purine_and_Pyrimidine_Biosynthesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_GLUPRT"/> + <groups:member groups:idRef="R_AIRC2r"/> + <groups:member groups:idRef="R_PRAGSr"/> + <groups:member groups:idRef="R_CTPS2"/> + <groups:member groups:idRef="R_PRASCS"/> + <groups:member groups:idRef="R_ADSL2r"/> + <groups:member groups:idRef="R_AICART"/> + <groups:member groups:idRef="R_ADSL1r"/> + <groups:member groups:idRef="R_PRFGS"/> + <groups:member groups:idRef="R_IMPC"/> + <groups:member groups:idRef="R_IMPD"/> + <groups:member groups:idRef="R_PRAIS"/> + <groups:member groups:idRef="R_ADSS"/> + <groups:member groups:idRef="R_DHORD2"/> + <groups:member groups:idRef="R_ORPT"/> + <groups:member groups:idRef="R_GARFT"/> + <groups:member groups:idRef="R_OMPDC"/> + <groups:member groups:idRef="R_AIRC3"/> + <groups:member groups:idRef="R_ASPCTn"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Purine_biosynthesis" groups:kind="classification" groups:name="Purine_biosynthesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_GMPS2"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Alternate_Carbon_Metabolism" groups:kind="classification" groups:name="Alternate_Carbon_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_dextrin_DEC_e_"/> + <groups:member groups:idRef="R_INSEPIH"/> + <groups:member groups:idRef="R_SPS"/> + <groups:member groups:idRef="R_GLYKr"/> + <groups:member groups:idRef="R_DGLUISO"/> + <groups:member groups:idRef="R_GLTN2pp"/> + <groups:member groups:idRef="R_G2PP"/> + <groups:member groups:idRef="R_X5PL3E"/> + <groups:member groups:idRef="R_XYLK2"/> + <groups:member groups:idRef="R_G3PD2"/> + <groups:member groups:idRef="R_UDPG4E"/> + <groups:member groups:idRef="R_PGLYCP"/> + <groups:member groups:idRef="R_INSDH"/> + <groups:member groups:idRef="R_ADNUC"/> + <groups:member groups:idRef="R_DTARTD"/> + <groups:member groups:idRef="R_UGLT"/> + <groups:member groups:idRef="R_ALCD2y"/> + <groups:member groups:idRef="R_6PDDGLUCA"/> + <groups:member groups:idRef="R_G6PDA"/> + <groups:member groups:idRef="R_DMPO_LACCASE"/> + <groups:member groups:idRef="R_LACZ"/> + <groups:member groups:idRef="R_SSALy"/> + <groups:member groups:idRef="R_MMSAD3"/> + <groups:member groups:idRef="R_CHTNDA2"/> + <groups:member groups:idRef="R_OCOAT1r"/> + <groups:member groups:idRef="R_PFK_2"/> + <groups:member groups:idRef="R_BHEXAMD"/> + <groups:member groups:idRef="R_MCITL2"/> + <groups:member groups:idRef="R_5DGLCNR"/> + <groups:member groups:idRef="R_A5PISO"/> + <groups:member groups:idRef="R_ACM6PH"/> + <groups:member groups:idRef="R_RBKr"/> + <groups:member groups:idRef="R_MICITDr"/> + <groups:member groups:idRef="R_LACZpp"/> + <groups:member groups:idRef="R_DKGLUCK"/> + <groups:member groups:idRef="R_PPM"/> + <groups:member groups:idRef="R_GLCGSD_c"/> + <groups:member groups:idRef="R_XYLI1"/> + <groups:member groups:idRef="R_GDDMR"/> + <groups:member groups:idRef="R_XYLK"/> + <groups:member groups:idRef="R_ABTA"/> + <groups:member groups:idRef="R_DDGLK"/> + <groups:member groups:idRef="R_ACCOAL2r"/> + <groups:member groups:idRef="R_AACOAR"/> + <groups:member groups:idRef="R_ACGAMABCt"/> + <groups:member groups:idRef="R_TREHpp"/> + <groups:member groups:idRef="R_AGDC_r"/> + <groups:member groups:idRef="R_BHEXAMD_p"/> + <groups:member groups:idRef="R_GALKr"/> + <groups:member groups:idRef="R_DHAPT"/> + <groups:member groups:idRef="R_INS2D"/> + <groups:member groups:idRef="R_RBP4E"/> + <groups:member groups:idRef="R_ACACT1r"/> + <groups:member groups:idRef="R_CHTNA2"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Arginine_and_Proline_Metabolism" groups:kind="classification" groups:name="Arginine_and_Proline_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_UREA"/> + <groups:member groups:idRef="R_ARGSSr"/> + <groups:member groups:idRef="R_ADMDCr"/> + <groups:member groups:idRef="R_AMPTASEPG"/> + <groups:member groups:idRef="R_ACGK"/> + <groups:member groups:idRef="R_SOTA"/> + <groups:member groups:idRef="R_ARGDC"/> + <groups:member groups:idRef="R_P5CD"/> + <groups:member groups:idRef="R_SPMS"/> + <groups:member groups:idRef="R_ACOTA"/> + <groups:member groups:idRef="R_ARGN"/> + <groups:member groups:idRef="R_G5SD"/> + <groups:member groups:idRef="R_PROD2"/> + <groups:member groups:idRef="R_CBPS"/> + <groups:member groups:idRef="R_AGDI_1"/> + <groups:member groups:idRef="R_APCS"/> + <groups:member groups:idRef="R_P5CR"/> + <groups:member groups:idRef="R_P5CD1p"/> + <groups:member groups:idRef="R_ARGDCpp"/> + <groups:member groups:idRef="R_ACODA"/> + <groups:member groups:idRef="R_AGPR"/> + <groups:member groups:idRef="R_NACODA"/> + <groups:member groups:idRef="R_ARGSL"/> + <groups:member groups:idRef="R_NITL5"/> + <groups:member groups:idRef="R_OCBT"/> + <groups:member groups:idRef="R_GLU5K"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Histidine_Metabolism" groups:kind="classification" groups:name="Histidine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_HISTD"/> + <groups:member groups:idRef="R_ATPPRTr"/> + <groups:member groups:idRef="R_HISDr"/> + <groups:member groups:idRef="R_IGPDH"/> + <groups:member groups:idRef="R_IG3PS"/> + <groups:member groups:idRef="R_PRMICI"/> + <groups:member groups:idRef="R_PRPPS"/> + <groups:member groups:idRef="R_HSTPTr"/> + <groups:member groups:idRef="R_PRATPP"/> + <groups:member groups:idRef="R_HISTP"/> + <groups:member groups:idRef="R_IZPN"/> + <groups:member groups:idRef="R_PRAMPC"/> + <groups:member groups:idRef="R_URCN"/> + <groups:member groups:idRef="R_FGLU"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Tyrosine__tryptophan__and_phenylalanine_metabolism" groups:kind="classification" groups:name="Tyrosine__tryptophan__and_phenylalanine_metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PRAI"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Extracellular_exchange" groups:kind="classification" groups:name="Extracellular_exchange"> + <groups:listOfMembers> + <groups:member groups:idRef="R_DM_DAD_5"/> + <groups:member groups:idRef="R_EX_chitin_polymer_e"/> + <groups:member groups:idRef="R_DM_FOR"/> + <groups:member groups:idRef="R_EX_asp_L_e"/> + <groups:member groups:idRef="R_EX_mn2_e"/> + <groups:member groups:idRef="R_EX_arg_L_e"/> + <groups:member groups:idRef="R_EX_man_e"/> + <groups:member groups:idRef="R_EX_gam_e"/> + <groups:member groups:idRef="R_EX_glyc_e"/> + <groups:member groups:idRef="R_DM_FRMD"/> + <groups:member groups:idRef="R_EX_pro_L_e"/> + <groups:member groups:idRef="R_EX_fe2_e"/> + <groups:member groups:idRef="R_EX_glu_L_e"/> + <groups:member groups:idRef="R_EX_4abut_e"/> + <groups:member groups:idRef="R_EX_so4_e"/> + <groups:member groups:idRef="R_DM_MEOH"/> + <groups:member groups:idRef="R_EX_rib_D_e"/> + <groups:member groups:idRef="R_EX_pi_e"/> + <groups:member groups:idRef="R_EX_h_e"/> + <groups:member groups:idRef="R_EX_fru_e"/> + <groups:member groups:idRef="R_EX_cu2_e"/> + <groups:member groups:idRef="R_EX_ni2_e"/> + <groups:member groups:idRef="R_DM_GCALD"/> + <groups:member groups:idRef="R_EX_dextrin_e"/> + <groups:member groups:idRef="R_EX_pyr_e"/> + <groups:member groups:idRef="R_EX_cl_e"/> + <groups:member groups:idRef="R_EX_lys_L_e"/> + <groups:member groups:idRef="R_DM_LesA_e"/> + <groups:member groups:idRef="R_EX_glc_D_e"/> + <groups:member groups:idRef="R_EX_ala_L_e"/> + <groups:member groups:idRef="R_DM_BIOMASS_c"/> + <groups:member groups:idRef="R_EX_ac_e"/> + <groups:member groups:idRef="R_EX_mobd_e"/> + <groups:member groups:idRef="R_EX_k_e"/> + <groups:member groups:idRef="R_EX_ca2_e"/> + <groups:member groups:idRef="R_EX_o2_e"/> + <groups:member groups:idRef="R_EX_s_e"/> + <groups:member groups:idRef="R_EX_gal_e"/> + <groups:member groups:idRef="R_EX_fe3_e"/> + <groups:member groups:idRef="R_EX_gln_L_e"/> + <groups:member groups:idRef="R_EX_cobalt2_e"/> + <groups:member groups:idRef="R_EX_URA_e"/> + <groups:member groups:idRef="R_DM_ADE"/> + <groups:member groups:idRef="R_EX_his_L_e"/> + <groups:member groups:idRef="R_EX_so3_e"/> + <groups:member groups:idRef="R_EX_xyl_D_e"/> + <groups:member groups:idRef="R_EX_zn2_e"/> + <groups:member groups:idRef="R_EX_h2o_e"/> + <groups:member groups:idRef="R_DM_AMOB"/> + <groups:member groups:idRef="R_EX_co2_e"/> + <groups:member groups:idRef="R_EX_inost_e"/> + <groups:member groups:idRef="R_EX_mg2_e"/> + <groups:member groups:idRef="R_EX_cit_e"/> + <groups:member groups:idRef="R_EX_nh4_e"/> + <groups:member groups:idRef="R_DM_E4P"/> + <groups:member groups:idRef="R_EX_tre_e"/> + <groups:member groups:idRef="R_EX_orn_e"/> + <groups:member groups:idRef="R_DM_EPS_XF_e"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Anaplerotic_Reactions" groups:kind="classification" groups:name="Anaplerotic_Reactions"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ME2"/> + <groups:member groups:idRef="R_PPA2"/> + <groups:member groups:idRef="R_MALS"/> + <groups:member groups:idRef="R_ICL"/> + <groups:member groups:idRef="R_PPA"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Nucleotides_degradation" groups:kind="classification" groups:name="Nucleotides_degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PPTHpp"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Protein_disulfide_bond_transfer" groups:kind="classification" groups:name="Protein_disulfide_bond_transfer"> + <groups:listOfMembers> + <groups:member groups:idRef="R_DSBCGT"/> + <groups:member groups:idRef="R_DSBAO1"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Methylglyoxal_Metabolism" groups:kind="classification" groups:name="Methylglyoxal_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_GLYOX3"/> + <groups:member groups:idRef="R_LGTHL"/> + <groups:member groups:idRef="R_ALR2"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Murein_Recycling" groups:kind="classification" groups:name="Murein_Recycling"> + <groups:listOfMembers> + <groups:member groups:idRef="R_MDDEP3pp"/> + <groups:member groups:idRef="R_MDDEP4pp"/> + <groups:member groups:idRef="R_AGM3PApp"/> + <groups:member groups:idRef="R_4PCPpp"/> + <groups:member groups:idRef="R_UM3PL"/> + <groups:member groups:idRef="R_UM4PL"/> + <groups:member groups:idRef="R_AGMH"/> + <groups:member groups:idRef="R_AGM3Pt2pp"/> + <groups:member groups:idRef="R_MDDEP1pp"/> + <groups:member groups:idRef="R_MDDEP2pp"/> + <groups:member groups:idRef="R_MLTGY2pp"/> + <groups:member groups:idRef="R_UDCPPtppi"/> + <groups:member groups:idRef="R_MLTGY3pp"/> + <groups:member groups:idRef="R_MLTGY4pp"/> + <groups:member groups:idRef="R_AGM4PApp"/> + <groups:member groups:idRef="R_AGMt2pp"/> + <groups:member groups:idRef="R_MLDEP1pp"/> + <groups:member groups:idRef="R_MLDEP2pp"/> + <groups:member groups:idRef="R_AGM4PH"/> + <groups:member groups:idRef="R_AGM3PH"/> + <groups:member groups:idRef="R_AGM4Pt2pp"/> + <groups:member groups:idRef="R_AGM4PCPpp"/> + <groups:member groups:idRef="R_MLTGY1pp"/> + <groups:member groups:idRef="R_ANHMK"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Oxidative_Phosphorylation" groups:kind="classification" groups:name="Oxidative_Phosphorylation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ATPS4rpp"/> + <groups:member groups:idRef="R_ETFDH"/> + <groups:member groups:idRef="R_PPK2r"/> + <groups:member groups:idRef="R_TRDR"/> + <groups:member groups:idRef="R_PPKr"/> + <groups:member groups:idRef="R_NADH16pp"/> + <groups:member groups:idRef="R_CYTBO3_4pp"/> + <groups:member groups:idRef="R_SUCDi"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Transport" groups:kind="classification" groups:name="Transport"> + <groups:listOfMembers> + <groups:member groups:idRef="R_CITt10"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glycerol_Degradation" groups:kind="classification" groups:name="Glycerol_Degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_G3PD5"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Transport__Outer_Membrane" groups:kind="classification" groups:name="Transport__Outer_Membrane"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ILEtex"/> + <groups:member groups:idRef="R_FRUpts2"/> + <groups:member groups:idRef="R_MINCYCtpp"/> + <groups:member groups:idRef="R_CYStex"/> + <groups:member groups:idRef="R_GLNtex"/> + <groups:member groups:idRef="R_SPMDtex"/> + <groups:member groups:idRef="R_PROT_pe_LesA"/> + <groups:member groups:idRef="R_HYXNtex"/> + <groups:member groups:idRef="R_METDtex"/> + <groups:member groups:idRef="R_LEUtex"/> + <groups:member groups:idRef="R_PTRCtex"/> + <groups:member groups:idRef="R_ORNtex"/> + <groups:member groups:idRef="R_GLYC2Ptex"/> + <groups:member groups:idRef="R_METtex"/> + <groups:member groups:idRef="R_THRtex"/> + <groups:member groups:idRef="R_MANtex"/> + <groups:member groups:idRef="R_OCDCAtexi"/> + <groups:member groups:idRef="R_ADNtex"/> + <groups:member groups:idRef="R_ALAt2tex"/> + <groups:member groups:idRef="R_METSOX2tex"/> + <groups:member groups:idRef="R_ACt2rex"/> + <groups:member groups:idRef="R_INDOLEtex"/> + <groups:member groups:idRef="R_VALtex"/> + <groups:member groups:idRef="R_NACtex"/> + <groups:member groups:idRef="R_HIStex"/> + <groups:member groups:idRef="R_ARGtex"/> + <groups:member groups:idRef="R_GLYCt"/> + <groups:member groups:idRef="R_RFAMPtpp"/> + <groups:member groups:idRef="R_TTRCYCtpp"/> + <groups:member groups:idRef="R_TTDCAtex"/> + <groups:member groups:idRef="R_FEENTERtonex"/> + <groups:member groups:idRef="R_GALt2"/> + <groups:member groups:idRef="R_BTNt2tex"/> + <groups:member groups:idRef="R_GLYC3Ptex"/> + <groups:member groups:idRef="R_FRUtex"/> + <groups:member groups:idRef="R_FUSAtpp"/> + <groups:member groups:idRef="R_3HPPtex"/> + <groups:member groups:idRef="R_ADEtex"/> + <groups:member groups:idRef="R_GLUtex"/> + <groups:member groups:idRef="R_OCDCEAtexi"/> + <groups:member groups:idRef="R_XYLtex"/> + <groups:member groups:idRef="R_CMtpp"/> + <groups:member groups:idRef="R_FUCtex"/> + <groups:member groups:idRef="R_GLYtex"/> + <groups:member groups:idRef="R_G3PItex"/> + <groups:member groups:idRef="R_DAPtex"/> + <groups:member groups:idRef="R_ARGt2rpp"/> + <groups:member groups:idRef="R_LYSt3r"/> + <groups:member groups:idRef="R_CITt3tex"/> + <groups:member groups:idRef="R_Bztex"/> + <groups:member groups:idRef="R_HDCAtex"/> + <groups:member groups:idRef="R_METSOX1tex"/> + <groups:member groups:idRef="R_OAAtex"/> + <groups:member groups:idRef="R_DOXRBCNtpp"/> + <groups:member groups:idRef="R_PROtex"/> + <groups:member groups:idRef="R_G3PEtex"/> + <groups:member groups:idRef="R_AKGt2rtex"/> + <groups:member groups:idRef="R_14GLUCANtex"/> + <groups:member groups:idRef="R_FUMt2_2tex"/> + <groups:member groups:idRef="R_INSTtex"/> + <groups:member groups:idRef="R_TREtex"/> + <groups:member groups:idRef="R_HDCEAtexi"/> + <groups:member groups:idRef="R_GUAtex"/> + <groups:member groups:idRef="R_NOVBCNtpp"/> + <groups:member groups:idRef="R_RIBtex"/> + <groups:member groups:idRef="R_URAtex"/> + <groups:member groups:idRef="R_PHEMEtiex"/> + <groups:member groups:idRef="R_GAMtex"/> + <groups:member groups:idRef="R_SERtex"/> + <groups:member groups:idRef="R_OTOTt2_2tex"/> + <groups:member groups:idRef="R_QUIN2tex"/> + <groups:member groups:idRef="R_THYMtex"/> + <groups:member groups:idRef="R_MEOHtex"/> + <groups:member groups:idRef="R_CYSDtex"/> + <groups:member groups:idRef="R_ABUTtex"/> + <groups:member groups:idRef="R_MSO3tex"/> + <groups:member groups:idRef="R_G3PStex"/> + <groups:member groups:idRef="R_CHTNtex"/> + <groups:member groups:idRef="R_TTDCEAtexi"/> + <groups:member groups:idRef="R_DDCAtex"/> + <groups:member groups:idRef="R_FORtex"/> + <groups:member groups:idRef="R_GLCt2"/> + <groups:member groups:idRef="R_NMNtex"/> + <groups:member groups:idRef="R_GLYALDtex"/> + <groups:member groups:idRef="R_ACALDtex"/> + <groups:member groups:idRef="R_MALDt2_2tex"/> + <groups:member groups:idRef="R_GLCtex"/> + <groups:member groups:idRef="R_G3PGtex"/> + <groups:member groups:idRef="R_GLYCLTt4ex"/> + <groups:member groups:idRef="R_ASPt2_2tex"/> + <groups:member groups:idRef="R_PYRt2rtex"/> + <groups:member groups:idRef="R_G3PCtex"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Inorganic_Ion_Transport_and_Metabolism" groups:kind="classification" groups:name="Inorganic_Ion_Transport_and_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_TSULabcpp"/> + <groups:member groups:idRef="R_NH4tex"/> + <groups:member groups:idRef="R_NAt3_1"/> + <groups:member groups:idRef="R_PItex"/> + <groups:member groups:idRef="R_COBALT2tpp"/> + <groups:member groups:idRef="R_NAabcO"/> + <groups:member groups:idRef="R_FE2t2pp"/> + <groups:member groups:idRef="R_MN2t3pp"/> + <groups:member groups:idRef="R_FE3tex"/> + <groups:member groups:idRef="R_SLNTtpp"/> + <groups:member groups:idRef="R_PIuabcpp"/> + <groups:member groups:idRef="R_CLtpp"/> + <groups:member groups:idRef="R_H2O2tex"/> + <groups:member groups:idRef="R_SELGTHR3"/> + <groups:member groups:idRef="R_SELGTHR2"/> + <groups:member groups:idRef="R_CU1Opp"/> + <groups:member groups:idRef="R_CD2tex"/> + <groups:member groups:idRef="R_O2tex"/> + <groups:member groups:idRef="R_MOBDtex"/> + <groups:member groups:idRef="R_CU2tex"/> + <groups:member groups:idRef="R_NI2t3tex"/> + <groups:member groups:idRef="R_St"/> + <groups:member groups:idRef="R_Niabcpp"/> + <groups:member groups:idRef="R_NOtpp"/> + <groups:member groups:idRef="R_MG2tex"/> + <groups:member groups:idRef="R_CU2tpp"/> + <groups:member groups:idRef="R_SELGTHR"/> + <groups:member groups:idRef="R_CO2tpp"/> + <groups:member groups:idRef="R_MOBDabcpp"/> + <groups:member groups:idRef="R_CA2tex"/> + <groups:member groups:idRef="R_COBALT2tex"/> + <groups:member groups:idRef="R_MG2t3_2pp"/> + <groups:member groups:idRef="R_SLNTtex"/> + <groups:member groups:idRef="R_H2tex"/> + <groups:member groups:idRef="R_NITL4"/> + <groups:member groups:idRef="R_H2Otex"/> + <groups:member groups:idRef="R_SO3abcpp"/> + <groups:member groups:idRef="R_NH4tpp"/> + <groups:member groups:idRef="R_H2Stex"/> + <groups:member groups:idRef="R_CD2t3pp"/> + <groups:member groups:idRef="R_CU2_bd_CopA"/> + <groups:member groups:idRef="R_NI2t3pp"/> + <groups:member groups:idRef="R_NO3abcpp"/> + <groups:member groups:idRef="R_H2O2tpp"/> + <groups:member groups:idRef="R_FE3abcpp"/> + <groups:member groups:idRef="R_Kt2tex"/> + <groups:member groups:idRef="R_SULtex"/> + <groups:member groups:idRef="R_COBALT2t3pp"/> + <groups:member groups:idRef="R_NOtex"/> + <groups:member groups:idRef="R_Mntex"/> + <groups:member groups:idRef="R_SULabcpp"/> + <groups:member groups:idRef="R_FEENTERtex"/> + <groups:member groups:idRef="R_FE3Gabcpp"/> + <groups:member groups:idRef="R_HCO3tex"/> + <groups:member groups:idRef="R_SO3tex"/> + <groups:member groups:idRef="R_H2SO"/> + <groups:member groups:idRef="R_NH3c"/> + <groups:member groups:idRef="R_ASR"/> + <groups:member groups:idRef="R_HCO3abcpp"/> + <groups:member groups:idRef="R_TSULtex"/> + <groups:member groups:idRef="R_FE2abcpp"/> + <groups:member groups:idRef="R_CLtex"/> + <groups:member groups:idRef="R_MG2tpp"/> + <groups:member groups:idRef="R_Actex"/> + <groups:member groups:idRef="R_Htex"/> + <groups:member groups:idRef="R_FE2tex"/> + <groups:member groups:idRef="R_O2tpp"/> + <groups:member groups:idRef="R_ZN2t3pp"/> + <groups:member groups:idRef="R_H2Stpp"/> + <groups:member groups:idRef="R_Kt2pp"/> + <groups:member groups:idRef="R_H2Otpp"/> + <groups:member groups:idRef="R_H2tpp"/> + <groups:member groups:idRef="R_CO2tex"/> + <groups:member groups:idRef="R_CA2tpp"/> + <groups:member groups:idRef="R_ZN2tex"/> + <groups:member groups:idRef="R_NO3tex"/> + <groups:member groups:idRef="R_MNabc_1"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Methionine_Metabolism" groups:kind="classification" groups:name="Methionine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PSP_L"/> + <groups:member groups:idRef="R_METOX1s"/> + <groups:member groups:idRef="R_DKMPPD"/> + <groups:member groups:idRef="R_2KMBT"/> + <groups:member groups:idRef="R_METOX2s"/> + <groups:member groups:idRef="R_METSr"/> + <groups:member groups:idRef="R_OXOGAH"/> + <groups:member groups:idRef="R_METAT"/> + <groups:member groups:idRef="R_SHSL1r"/> + <groups:member groups:idRef="R_METSOXR2"/> + <groups:member groups:idRef="R_METSOXR1"/> + <groups:member groups:idRef="R_HSERTA"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Murein_Biosynthesis" groups:kind="classification" groups:name="Murein_Biosynthesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_MDDCP5pp"/> + <groups:member groups:idRef="R_MDDCP1pp"/> + <groups:member groups:idRef="R_MDDCP2pp"/> + <groups:member groups:idRef="R_MDDCP3pp"/> + <groups:member groups:idRef="R_MDDCP4pp"/> + <groups:member groups:idRef="R_MCTP1Bpp"/> + <groups:member groups:idRef="R_MPTG"/> + <groups:member groups:idRef="R_MPTG2"/> + <groups:member groups:idRef="R_MCTP1App"/> + <groups:member groups:idRef="R_MCTP2App"/> + <groups:member groups:idRef="R_MLDCP2App"/> + <groups:member groups:idRef="R_MLDCP2Bpp"/> + <groups:member groups:idRef="R_MLDCP1App"/> + <groups:member groups:idRef="R_MLDCP1Bpp"/> + <groups:member groups:idRef="R_UM4PCP"/> + <groups:member groups:idRef="R_MLDCP3App"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Threonine_and_Lysine_Metabolism" groups:kind="classification" groups:name="Threonine_and_Lysine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ATHRDHr"/> + <groups:member groups:idRef="R_HSDy"/> + <groups:member groups:idRef="R_SDPDS"/> + <groups:member groups:idRef="R_THRS"/> + <groups:member groups:idRef="R_DHDPS"/> + <groups:member groups:idRef="R_ASADH"/> + <groups:member groups:idRef="R_SDPTA"/> + <groups:member groups:idRef="R_DHDPRy"/> + <groups:member groups:idRef="R_THRA2r"/> + <groups:member groups:idRef="R_DAPE"/> + <groups:member groups:idRef="R_THDPS"/> + <groups:member groups:idRef="R_ASPK"/> + <groups:member groups:idRef="R_HSK"/> + <groups:member groups:idRef="R_DAPDC"/> + <groups:member groups:idRef="R_THRAr"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Transport__Inner_Membrane" groups:kind="classification" groups:name="Transport__Inner_Membrane"> + <groups:listOfMembers> + <groups:member groups:idRef="R_NMNt7pp"/> + <groups:member groups:idRef="R_OROTt2_2pp"/> + <groups:member groups:idRef="R_PGP140abcpp"/> + <groups:member groups:idRef="R_PG180abcpp"/> + <groups:member groups:idRef="R_GLUt2rpp"/> + <groups:member groups:idRef="R_MANptspp"/> + <groups:member groups:idRef="R_DALAt2pp"/> + <groups:member groups:idRef="R_INOSTt2pp"/> + <groups:member groups:idRef="R_MNt2pp"/> + <groups:member groups:idRef="R_PE141abcpp"/> + <groups:member groups:idRef="R_PGP141abcpp"/> + <groups:member groups:idRef="R_PG120abcpp"/> + <groups:member groups:idRef="R_PA160abcpp"/> + <groups:member groups:idRef="R_AKGt2rpp"/> + <groups:member groups:idRef="R_PA141abcpp"/> + <groups:member groups:idRef="R_INDOLEt2pp"/> + <groups:member groups:idRef="R_UREAtpp"/> + <groups:member groups:idRef="R_ALAALAabcpp"/> + <groups:member groups:idRef="R_ALAt2pp"/> + <groups:member groups:idRef="R_ETOHtrpp"/> + <groups:member groups:idRef="R_GAMptspp"/> + <groups:member groups:idRef="R_GLYC3Pabcpp"/> + <groups:member groups:idRef="R_XYLabcpp"/> + <groups:member groups:idRef="R_ARGabcpp"/> + <groups:member groups:idRef="R_MSO3abcpp"/> + <groups:member groups:idRef="R_PTRCabcpp"/> + <groups:member groups:idRef="R_PGP120abcpp"/> + <groups:member groups:idRef="R_PHEMEabcpp"/> + <groups:member groups:idRef="R_FORtppi"/> + <groups:member groups:idRef="R_3PEPTabcpp"/> + <groups:member groups:idRef="R_GLNabc"/> + <groups:member groups:idRef="R_NACtpp"/> + <groups:member groups:idRef="R_PE161abcpp"/> + <groups:member groups:idRef="R_ORNtpp"/> + <groups:member groups:idRef="R_PA161abcpp"/> + <groups:member groups:idRef="R_GLCptspp"/> + <groups:member groups:idRef="R_ILEabcpp"/> + <groups:member groups:idRef="R_12DGR180tipp"/> + <groups:member groups:idRef="R_GLUabcpp"/> + <groups:member groups:idRef="R_MALDt2_2pp"/> + <groups:member groups:idRef="R_GLYALDtpp"/> + <groups:member groups:idRef="R_PE160abcpp"/> + <groups:member groups:idRef="R_12DGR140tipp"/> + <groups:member groups:idRef="R_CHTBSptspp"/> + <groups:member groups:idRef="R_GLYC3Pabc"/> + <groups:member groups:idRef="R_CITt3pp"/> + <groups:member groups:idRef="R_PGP180abcpp"/> + <groups:member groups:idRef="R_PG140abcpp"/> + <groups:member groups:idRef="R_PTRCt2pp"/> + <groups:member groups:idRef="R_PA180abcpp"/> + <groups:member groups:idRef="R_PGP161abcpp"/> + <groups:member groups:idRef="R_ICITt_kt"/> + <groups:member groups:idRef="R_PG181abcpp"/> + <groups:member groups:idRef="R_GLYCtpp"/> + <groups:member groups:idRef="R_HYXNtpp"/> + <groups:member groups:idRef="R_FUMt2_2pp"/> + <groups:member groups:idRef="R_Bztpp"/> + <groups:member groups:idRef="R_METabcpp"/> + <groups:member groups:idRef="R_LYSabcpp"/> + <groups:member groups:idRef="R_SERabcpp"/> + <groups:member groups:idRef="R_METSOX2abcpp"/> + <groups:member groups:idRef="R_CHTNABCt"/> + <groups:member groups:idRef="R_ADEt2rpp"/> + <groups:member groups:idRef="R_PROt2rpp"/> + <groups:member groups:idRef="R_PA120abcpp"/> + <groups:member groups:idRef="R_PA181abcpp"/> + <groups:member groups:idRef="R_QUIN2tpp"/> + <groups:member groups:idRef="R_GLUt4pp"/> + <groups:member groups:idRef="R_GUAtpp"/> + <groups:member groups:idRef="R_PG141abcpp"/> + <groups:member groups:idRef="R_TDSR2"/> + <groups:member groups:idRef="R_ACt4pp"/> + <groups:member groups:idRef="R_TDSR1"/> + <groups:member groups:idRef="R_THRabcpp"/> + <groups:member groups:idRef="R_GLYC2Pabcpp"/> + <groups:member groups:idRef="R_12DGR161tipp"/> + <groups:member groups:idRef="R_MEOHtrpp"/> + <groups:member groups:idRef="R_PE180abcpp"/> + <groups:member groups:idRef="R_ASPt2_3pp"/> + <groups:member groups:idRef="R_SUCCt3pp"/> + <groups:member groups:idRef="R_METSOX1abcpp"/> + <groups:member groups:idRef="R_G3PEabcpp"/> + <groups:member groups:idRef="R_PROabcpp"/> + <groups:member groups:idRef="R_ACMUMptspp"/> + <groups:member groups:idRef="R_14GLUCANabcpp"/> + <groups:member groups:idRef="R_DAPabcpp"/> + <groups:member groups:idRef="R_BTNt2ipp"/> + <groups:member groups:idRef="R_ADNt2pp"/> + <groups:member groups:idRef="R_CYSDabcpp"/> + <groups:member groups:idRef="R_G3PGabcpp"/> + <groups:member groups:idRef="R_PROT_cp_LesA"/> + <groups:member groups:idRef="R_4PEPTabcpp"/> + <groups:member groups:idRef="R_PGP181abcpp"/> + <groups:member groups:idRef="R_12DGR120tipp"/> + <groups:member groups:idRef="R_THYMt3pp"/> + <groups:member groups:idRef="R_G3PSabcpp"/> + <groups:member groups:idRef="R_URAt2pp"/> + <groups:member groups:idRef="R_CYSabcpp"/> + <groups:member groups:idRef="R_FRUptspp"/> + <groups:member groups:idRef="R_PE120abcpp"/> + <groups:member groups:idRef="R_GLYCLTt4pp"/> + <groups:member groups:idRef="R_12DGR181tipp"/> + <groups:member groups:idRef="R_PYRt2rpp"/> + <groups:member groups:idRef="R_GLYt2pp"/> + <groups:member groups:idRef="R_LPSabctpp"/> + <groups:member groups:idRef="R_PG161abcpp"/> + <groups:member groups:idRef="R_METDabcpp"/> + <groups:member groups:idRef="R_PG160abcpp"/> + <groups:member groups:idRef="R_LEUabcpp"/> + <groups:member groups:idRef="R_OAAt2_2pp"/> + <groups:member groups:idRef="R_PGP160abcpp"/> + <groups:member groups:idRef="R_ASPt2_2pp"/> + <groups:member groups:idRef="R_ACALDtpp"/> + <groups:member groups:idRef="R_SPMDabcpp"/> + <groups:member groups:idRef="R_ABUTt2pp"/> + <groups:member groups:idRef="R_PE140abcpp"/> + <groups:member groups:idRef="R_FEENTERtpp"/> + <groups:member groups:idRef="R_ACt2rpp"/> + <groups:member groups:idRef="R_12DGR141tipp"/> + <groups:member groups:idRef="R_3HPPtpp"/> + <groups:member groups:idRef="R_G3PIabcpp"/> + <groups:member groups:idRef="R_G3PCabcpp"/> + <groups:member groups:idRef="R_RIBabcpp"/> + <groups:member groups:idRef="R_HISabcpp"/> + <groups:member groups:idRef="R_VALabcpp"/> + <groups:member groups:idRef="R_PA140abcpp"/> + <groups:member groups:idRef="R_TREptspp"/> + <groups:member groups:idRef="R_PE181abcpp"/> + <groups:member groups:idRef="R_12DGR160tipp"/> + <groups:member groups:idRef="R_FUCtpp"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Membrane_Lipid_Metabolism" groups:kind="classification" groups:name="Membrane_Lipid_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_KAS14"/> + <groups:member groups:idRef="R_MCOATA"/> + <groups:member groups:idRef="R_ACCOACr"/> + <groups:member groups:idRef="R_ACOATA"/> + <groups:member groups:idRef="R_KAS15"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cofactor_and_Prosthetic_Group_Biosynthesis" groups:kind="classification" groups:name="Cofactor_and_Prosthetic_Group_Biosynthesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_OPMEACPR"/> + <groups:member groups:idRef="R_OPMEACPS"/> + <groups:member groups:idRef="R_RZ5PP"/> + <groups:member groups:idRef="R_SCYSDS"/> + <groups:member groups:idRef="R_AOXSr2"/> + <groups:member groups:idRef="R_NADK"/> + <groups:member groups:idRef="R_ALATA_D2"/> + <groups:member groups:idRef="R_TMPKr"/> + <groups:member groups:idRef="R_OPHBDC"/> + <groups:member groups:idRef="R_NNDPR"/> + <groups:member groups:idRef="R_CPPPGO"/> + <groups:member groups:idRef="R_ALATA_L2"/> + <groups:member groups:idRef="R_GLUCYS"/> + <groups:member groups:idRef="R_DHNCOAT"/> + <groups:member groups:idRef="R_CDPMEK"/> + <groups:member groups:idRef="R_AKP1"/> + <groups:member groups:idRef="R_ThDPAT"/> + <groups:member groups:idRef="R_FADRx2"/> + <groups:member groups:idRef="R_UBQBM"/> + <groups:member groups:idRef="R_ICYSDS"/> + <groups:member groups:idRef="R_EPMEACPR"/> + <groups:member groups:idRef="R_DXPS"/> + <groups:member groups:idRef="R_PMEACPE"/> + <groups:member groups:idRef="R_GRTT"/> + <groups:member groups:idRef="R_S4FE4SR"/> + <groups:member groups:idRef="R_OPMEACPD"/> + <groups:member groups:idRef="R_FMNRx2"/> + <groups:member groups:idRef="R_QULNS"/> + <groups:member groups:idRef="R_MPTSS"/> + <groups:member groups:idRef="R_S4FE4ST"/> + <groups:member groups:idRef="R_APRAUR"/> + <groups:member groups:idRef="R_2THZPSN2"/> + <groups:member groups:idRef="R_DMPPS"/> + <groups:member groups:idRef="R_NAMNPP"/> + <groups:member groups:idRef="R_GDPTPDP"/> + <groups:member groups:idRef="R_THFAT"/> + <groups:member groups:idRef="R_S2FE2ST"/> + <groups:member groups:idRef="R_GDPDPK"/> + <groups:member groups:idRef="R_LIPOS"/> + <groups:member groups:idRef="R_S2FE2SS"/> + <groups:member groups:idRef="R_S2FE2SR"/> + <groups:member groups:idRef="R_MECDPDH5"/> + <groups:member groups:idRef="R_2MAHMP"/> + <groups:member groups:idRef="R_LIPOCT"/> + <groups:member groups:idRef="R_SHCHF"/> + <groups:member groups:idRef="R_G1SAT"/> + <groups:member groups:idRef="R_NADDP"/> + <groups:member groups:idRef="R_UDCPDPS"/> + <groups:member groups:idRef="R_DHFR"/> + <groups:member groups:idRef="R_PYAM5POr"/> + <groups:member groups:idRef="R_NMNATr"/> + <groups:member groups:idRef="R_DHFS"/> + <groups:member groups:idRef="R_UPP3MT"/> + <groups:member groups:idRef="R_CCGS"/> + <groups:member groups:idRef="R_PPBNGS"/> + <groups:member groups:idRef="R_GTHRDHpp"/> + <groups:member groups:idRef="R_PPPGO"/> + <groups:member groups:idRef="R_DHPPDA2"/> + <groups:member groups:idRef="R_AMPMS2"/> + <groups:member groups:idRef="R_FLDR2"/> + <groups:member groups:idRef="R_EGMEACPR"/> + <groups:member groups:idRef="R_DHNPTE"/> + <groups:member groups:idRef="R_MALCOAMT"/> + <groups:member groups:idRef="R_DXPRIi"/> + <groups:member groups:idRef="R_DHGLYH"/> + <groups:member groups:idRef="R_DB4PS"/> + <groups:member groups:idRef="R_FMNAT"/> + <groups:member groups:idRef="R_DPR"/> + <groups:member groups:idRef="R_UPP3S"/> + <groups:member groups:idRef="R_FLVR"/> + <groups:member groups:idRef="R_NADS2"/> + <groups:member groups:idRef="R_DNTPPA"/> + <groups:member groups:idRef="R_SEAHCYSHYD"/> + <groups:member groups:idRef="R_RBFK"/> + <groups:member groups:idRef="R_AHSERL3"/> + <groups:member groups:idRef="R_PNTK"/> + <groups:member groups:idRef="R_DPCOAK"/> + <groups:member groups:idRef="R_PHEMEAS"/> + <groups:member groups:idRef="R_NNAMr"/> + <groups:member groups:idRef="R_GTPDPK"/> + <groups:member groups:idRef="R_HPPK2"/> + <groups:member groups:idRef="R_TMPPP"/> + <groups:member groups:idRef="R_IPDPS"/> + <groups:member groups:idRef="R_DMATT"/> + <groups:member groups:idRef="R_GTPCI"/> + <groups:member groups:idRef="R_PPGPPDP"/> + <groups:member groups:idRef="R_FCLT"/> + <groups:member groups:idRef="R_THZPSN3"/> + <groups:member groups:idRef="R_CPH4S"/> + <groups:member groups:idRef="R_CDGS"/> + <groups:member groups:idRef="R_CDGR"/> + <groups:member groups:idRef="R_2THZPSN"/> + <groups:member groups:idRef="R_RBFSb"/> + <groups:member groups:idRef="R_BTS5"/> + <groups:member groups:idRef="R_MECDPS"/> + <groups:member groups:idRef="R_HMBS"/> + <groups:member groups:idRef="R_RBFSa"/> + <groups:member groups:idRef="R_CHRPL"/> + <groups:member groups:idRef="R_OMPHHX"/> + <groups:member groups:idRef="R_HMPK1"/> + <groups:member groups:idRef="R_NMNDA"/> + <groups:member groups:idRef="R_GTPCII2"/> + <groups:member groups:idRef="R_PTPAT"/> + <groups:member groups:idRef="R_HBZOPT"/> + <groups:member groups:idRef="R_GRXR"/> + <groups:member groups:idRef="R_4HTHRS"/> + <groups:member groups:idRef="R_SHCHD2"/> + <groups:member groups:idRef="R_PPCDC"/> + <groups:member groups:idRef="R_NMNN"/> + <groups:member groups:idRef="R_OGMEACPD"/> + <groups:member groups:idRef="R_THBPTD"/> + <groups:member groups:idRef="R_UPPDC1"/> + <groups:member groups:idRef="R_MEPCT"/> + <groups:member groups:idRef="R_PMPK"/> + <groups:member groups:idRef="R_GTHS"/> + <groups:member groups:idRef="R_DBTSr"/> + <groups:member groups:idRef="R_DHNPA2"/> + <groups:member groups:idRef="R_AMAOTr"/> + <groups:member groups:idRef="R_PMDPHT"/> + <groups:member groups:idRef="R_OMMBLHX"/> + <groups:member groups:idRef="R_S2FE2SS2"/> + <groups:member groups:idRef="R_E4PD"/> + <groups:member groups:idRef="R_PDX5PS"/> + <groups:member groups:idRef="R_HEMEOS"/> + <groups:member groups:idRef="R_ALKP"/> + <groups:member groups:idRef="R_TDP"/> + <groups:member groups:idRef="R_MOHMT"/> + <groups:member groups:idRef="R_CPPPGO2"/> + <groups:member groups:idRef="R_DMQMT"/> + <groups:member groups:idRef="R_ADCL"/> + <groups:member groups:idRef="R_ASPO5"/> + <groups:member groups:idRef="R_DNMPPA"/> + <groups:member groups:idRef="R_OCTDPS"/> + <groups:member groups:idRef="R_ASPO3"/> + <groups:member groups:idRef="R_DHPS2"/> + <groups:member groups:idRef="R_PDX5PO"/> + <groups:member groups:idRef="R_ADCS"/> + <groups:member groups:idRef="R_ASP1DC"/> + <groups:member groups:idRef="R_ASPO6"/> + <groups:member groups:idRef="R_PANTS"/> + <groups:member groups:idRef="R_OGMEACPS"/> + <groups:member groups:idRef="R_OPHHX"/> + <groups:member groups:idRef="R_OHPBAT"/> + <groups:member groups:idRef="R_OGMEACPR"/> + <groups:member groups:idRef="R_PPNCL2"/> + <groups:member groups:idRef="R_NADPPPS"/> + <groups:member groups:idRef="R_OHPHM"/> + <groups:member groups:idRef="R_PERD"/> + <groups:member groups:idRef="R_GTHOr"/> + <groups:member groups:idRef="R_OMBZLM"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glycine_and_Serine_Metabolism" groups:kind="classification" groups:name="Glycine_and_Serine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_DSERDHr"/> + <groups:member groups:idRef="R_LSERDHr"/> + <groups:member groups:idRef="R_GHMT2r"/> + <groups:member groups:idRef="R_PGCDr"/> + <groups:member groups:idRef="R_GLYAT"/> + <groups:member groups:idRef="R_PSERTr"/> + <groups:member groups:idRef="R_PSP"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Pentose_Phosphate_Pathway" groups:kind="classification" groups:name="Pentose_Phosphate_Pathway"> + <groups:listOfMembers> + <groups:member groups:idRef="R_RPI"/> + <groups:member groups:idRef="R_SBPA"/> + <groups:member groups:idRef="R_RPE"/> + <groups:member groups:idRef="R_EDD"/> + <groups:member groups:idRef="R_PGL"/> + <groups:member groups:idRef="R_G6PDH2r"/> + <groups:member groups:idRef="R_EDA"/> + <groups:member groups:idRef="R_TKT2"/> + <groups:member groups:idRef="R_TKT1"/> + <groups:member groups:idRef="R_PFK_3"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cyanate_degradation" groups:kind="classification" groups:name="Cyanate_degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_HCO3E"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cystein_Metabolism" groups:kind="classification" groups:name="Cystein_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_AHC"/> + <groups:member groups:idRef="R_CYSSr2"/> + <groups:member groups:idRef="R_CYSTS"/> + <groups:member groups:idRef="R_CYSTGL"/> + <groups:member groups:idRef="R_SLCYSS"/> + <groups:member groups:idRef="R_AHSERL2"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glutamate_Metabolism_" groups:kind="classification" groups:name="Glutamate_Metabolism_"> + <groups:listOfMembers> + <groups:member groups:idRef="R_GLNS"/> + <groups:member groups:idRef="R_GLUSy"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Nitrile_degradation" groups:kind="classification" groups:name="Nitrile_degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_NTRLASE3"/> + <groups:member groups:idRef="R_NTRLASE2"/> + <groups:member groups:idRef="R_NTRLASE"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Nitrogen_Metabolism" groups:kind="classification" groups:name="Nitrogen_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_NODOx"/> + <groups:member groups:idRef="R_ALLTNr"/> + <groups:member groups:idRef="R_NODOy"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glycerophospholipid_Metabolism" groups:kind="classification" groups:name="Glycerophospholipid_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PGPP160"/> + <groups:member groups:idRef="R_PGPP120"/> + <groups:member groups:idRef="R_PGPP161"/> + <groups:member groups:idRef="R_AGPAT160"/> + <groups:member groups:idRef="R_DASYN141"/> + <groups:member groups:idRef="R_AGPAT161"/> + <groups:member groups:idRef="R_AGPAT120"/> + <groups:member groups:idRef="R_DASYN181"/> + <groups:member groups:idRef="R_PGSA180"/> + <groups:member groups:idRef="R_DASYN140"/> + <groups:member groups:idRef="R_DASYN180"/> + <groups:member groups:idRef="R_DAGK120"/> + <groups:member groups:idRef="R_EAR181x"/> + <groups:member groups:idRef="R_G3PAT161"/> + <groups:member groups:idRef="R_PGSA141"/> + <groups:member groups:idRef="R_G3PAT160"/> + <groups:member groups:idRef="R_EAR161x"/> + <groups:member groups:idRef="R_EAR40x"/> + <groups:member groups:idRef="R_EAR141x"/> + <groups:member groups:idRef="R_PGSA181"/> + <groups:member groups:idRef="R_EAR60x"/> + <groups:member groups:idRef="R_G3PAT120"/> + <groups:member groups:idRef="R_PGSA140"/> + <groups:member groups:idRef="R_EAR121x"/> + <groups:member groups:idRef="R_EAR80x"/> + <groups:member groups:idRef="R_DAGK180"/> + <groups:member groups:idRef="R_DAGK181"/> + <groups:member groups:idRef="R_DAGK140"/> + <groups:member groups:idRef="R_CLPNS181pp"/> + <groups:member groups:idRef="R_CLPNS160pp"/> + <groups:member groups:idRef="R_PSSA120"/> + <groups:member groups:idRef="R_CLPNS141pp"/> + <groups:member groups:idRef="R_PGPP140pp"/> + <groups:member groups:idRef="R_PSSA161"/> + <groups:member groups:idRef="R_PSD160"/> + <groups:member groups:idRef="R_PSSA160"/> + <groups:member groups:idRef="R_PGPP161pp"/> + <groups:member groups:idRef="R_PSD161"/> + <groups:member groups:idRef="R_PSD120"/> + <groups:member groups:idRef="R_PGPP180pp"/> + <groups:member groups:idRef="R_PGPP181"/> + <groups:member groups:idRef="R_PGPP180"/> + <groups:member groups:idRef="R_PGPP141"/> + <groups:member groups:idRef="R_AGPAT180"/> + <groups:member groups:idRef="R_AGPAT181"/> + <groups:member groups:idRef="R_PGPP140"/> + <groups:member groups:idRef="R_AGPAT140"/> + <groups:member groups:idRef="R_DASYN120"/> + <groups:member groups:idRef="R_AGPAT141"/> + <groups:member groups:idRef="R_CLPNS120pp"/> + <groups:member groups:idRef="R_DASYN160"/> + <groups:member groups:idRef="R_DASYN161"/> + <groups:member groups:idRef="R_G3PAT140"/> + <groups:member groups:idRef="R_PGSA120"/> + <groups:member groups:idRef="R_DAGK141"/> + <groups:member groups:idRef="R_G3PAT181"/> + <groups:member groups:idRef="R_PGSA160"/> + <groups:member groups:idRef="R_G3PAT141"/> + <groups:member groups:idRef="R_PGSA161"/> + <groups:member groups:idRef="R_G3PAT180"/> + <groups:member groups:idRef="R_DAGK160"/> + <groups:member groups:idRef="R_DAGK161"/> + <groups:member groups:idRef="R_CLPNS180pp"/> + <groups:member groups:idRef="R_CLPNS161pp"/> + <groups:member groups:idRef="R_CLPNS140pp"/> + <groups:member groups:idRef="R_PSSA141"/> + <groups:member groups:idRef="R_PSD180"/> + <groups:member groups:idRef="R_PSSA140"/> + <groups:member groups:idRef="R_PGPP120pp"/> + <groups:member groups:idRef="R_PSD181"/> + <groups:member groups:idRef="R_PSSA181"/> + <groups:member groups:idRef="R_PGPP141pp"/> + <groups:member groups:idRef="R_PSSA180"/> + <groups:member groups:idRef="R_EAR180x"/> + <groups:member groups:idRef="R_EAR160x"/> + <groups:member groups:idRef="R_EAR140x"/> + <groups:member groups:idRef="R_PSD140"/> + <groups:member groups:idRef="R_EAR120x"/> + <groups:member groups:idRef="R_PGPP160pp"/> + <groups:member groups:idRef="R_PGPP181pp"/> + <groups:member groups:idRef="R_EAR100x"/> + <groups:member groups:idRef="R_PSD141"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Biomass_and_maintenance_functions" groups:kind="classification" groups:name="Biomass_and_maintenance_functions"> + <groups:listOfMembers> + <groups:member groups:idRef="R_XF_Biomass"/> + <groups:member groups:idRef="R_ATPM"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Nucleotide_Salvage_Pathway" groups:kind="classification" groups:name="Nucleotide_Salvage_Pathway"> + <groups:listOfMembers> + <groups:member groups:idRef="R_CYTK1"/> + <groups:member groups:idRef="R_DCTPD"/> + <groups:member groups:idRef="R_DHORTS"/> + <groups:member groups:idRef="R_DCTPD2"/> + <groups:member groups:idRef="R_DTMPK"/> + <groups:member groups:idRef="R_CYTK2"/> + <groups:member groups:idRef="R_RNDR3b"/> + <groups:member groups:idRef="R_NTPP11"/> + <groups:member groups:idRef="R_NTPP10"/> + <groups:member groups:idRef="R_DGK1"/> + <groups:member groups:idRef="R_GUAPRT"/> + <groups:member groups:idRef="R_ATPHs"/> + <groups:member groups:idRef="R_RNDR2b"/> + <groups:member groups:idRef="R_HXPRT"/> + <groups:member groups:idRef="R_UMPK"/> + <groups:member groups:idRef="R_ADK1"/> + <groups:member groups:idRef="R_NDPK4"/> + <groups:member groups:idRef="R_NDPK5"/> + <groups:member groups:idRef="R_NTPP2"/> + <groups:member groups:idRef="R_NDPK2"/> + <groups:member groups:idRef="R_NTPP1"/> + <groups:member groups:idRef="R_NDPK3"/> + <groups:member groups:idRef="R_NTP5"/> + <groups:member groups:idRef="R_NDPK1"/> + <groups:member groups:idRef="R_GP4GH"/> + <groups:member groups:idRef="R_NTP1"/> + <groups:member groups:idRef="R_NTP3"/> + <groups:member groups:idRef="R_NDPK8"/> + <groups:member groups:idRef="R_AP4AS"/> + <groups:member groups:idRef="R_ADK3"/> + <groups:member groups:idRef="R_NDPK6"/> + <groups:member groups:idRef="R_ADK4"/> + <groups:member groups:idRef="R_NDPK7"/> + <groups:member groups:idRef="R_RNDR1b"/> + <groups:member groups:idRef="R_NTD9"/> + <groups:member groups:idRef="R_PYNP2r"/> + <groups:member groups:idRef="R_NTPP8"/> + <groups:member groups:idRef="R_NTD5"/> + <groups:member groups:idRef="R_AP4AHr"/> + <groups:member groups:idRef="R_DUTPDP"/> + <groups:member groups:idRef="R_NTPP7"/> + <groups:member groups:idRef="R_NTD6"/> + <groups:member groups:idRef="R_NTD7"/> + <groups:member groups:idRef="R_NTPP9"/> + <groups:member groups:idRef="R_NTD8"/> + <groups:member groups:idRef="R_NTPP4"/> + <groups:member groups:idRef="R_NTD1"/> + <groups:member groups:idRef="R_NTPP3"/> + <groups:member groups:idRef="R_NTD2"/> + <groups:member groups:idRef="R_NTPP6"/> + <groups:member groups:idRef="R_NTD3"/> + <groups:member groups:idRef="R_NTPP5"/> + <groups:member groups:idRef="R_NTD4"/> + <groups:member groups:idRef="R_GK1"/> + <groups:member groups:idRef="R_DADK"/> + <groups:member groups:idRef="R_TMDS"/> + <groups:member groups:idRef="R_ADPRDP"/> + <groups:member groups:idRef="R_DATPHs"/> + <groups:member groups:idRef="R_MSAR"/> + <groups:member groups:idRef="R_ADNK1"/> + <groups:member groups:idRef="R_RNDR4b"/> + <groups:member groups:idRef="R_NTP10"/> + <groups:member groups:idRef="R_CMPN"/> + <groups:member groups:idRef="R_AP5AH"/> + <groups:member groups:idRef="R_NNATr"/> + <groups:member groups:idRef="R_RNDR2"/> + <groups:member groups:idRef="R_RNDR1"/> + <groups:member groups:idRef="R_NTD11"/> + <groups:member groups:idRef="R_NTD10"/> + <groups:member groups:idRef="R_RNDR4"/> + <groups:member groups:idRef="R_RNDR3"/> + <groups:member groups:idRef="R_NTD12"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cell_Envelope_Biosynthesis" groups:kind="classification" groups:name="Cell_Envelope_Biosynthesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_UAAGDS"/> + <groups:member groups:idRef="R_3HAD121"/> + <groups:member groups:idRef="R_3HAD120"/> + <groups:member groups:idRef="R_GMAND"/> + <groups:member groups:idRef="R_AACPS9"/> + <groups:member groups:idRef="R_EPSsynthXF"/> + <groups:member groups:idRef="R_PMANM"/> + <groups:member groups:idRef="R_3OAR160"/> + <groups:member groups:idRef="R_3OAR161"/> + <groups:member groups:idRef="R_K2L4Aabctex"/> + <groups:member groups:idRef="R_FACOAL141t2pp"/> + <groups:member groups:idRef="R_ALAALAr"/> + <groups:member groups:idRef="R_UGMDDS"/> + <groups:member groups:idRef="R_UDPGDC"/> + <groups:member groups:idRef="R_UDCPDP"/> + <groups:member groups:idRef="R_AACPS8"/> + <groups:member groups:idRef="R_AACPS7"/> + <groups:member groups:idRef="R_AACPS6"/> + <groups:member groups:idRef="R_3HAD60"/> + <groups:member groups:idRef="R_AACPS5"/> + <groups:member groups:idRef="R_AACPS4"/> + <groups:member groups:idRef="R_AACPS3"/> + <groups:member groups:idRef="R_3OAS120"/> + <groups:member groups:idRef="R_AACPS2"/> + <groups:member groups:idRef="R_3OAS121"/> + <groups:member groups:idRef="R_AACPS1"/> + <groups:member groups:idRef="R_F2NAPPUDC"/> + <groups:member groups:idRef="R_FACOAE140"/> + <groups:member groups:idRef="R_FACOAE141"/> + <groups:member groups:idRef="R_FACOAL80t2pp"/> + <groups:member groups:idRef="R_G1PTT"/> + <groups:member groups:idRef="R_LIPAabctex"/> + <groups:member groups:idRef="R_LPADSSXF"/> + <groups:member groups:idRef="R_3HAD100"/> + <groups:member groups:idRef="R_GLUR"/> + <groups:member groups:idRef="R_PGAMT"/> + <groups:member groups:idRef="R_EDTXS3XF"/> + <groups:member groups:idRef="R_COLIPAabcpp"/> + <groups:member groups:idRef="R_FACOAL161t2pp"/> + <groups:member groups:idRef="R_3HAD181"/> + <groups:member groups:idRef="R_3HAD180"/> + <groups:member groups:idRef="R_3OAR140"/> + <groups:member groups:idRef="R_3OAR141"/> + <groups:member groups:idRef="R_FACOAL180t2pp"/> + <groups:member groups:idRef="R_EPStexXF"/> + <groups:member groups:idRef="R_USHDXF"/> + <groups:member groups:idRef="R_LPSS2XF"/> + <groups:member groups:idRef="R_ACMAMUT"/> + <groups:member groups:idRef="R_3OAS180"/> + <groups:member groups:idRef="R_3OAS181"/> + <groups:member groups:idRef="R_MAN6PI"/> + <groups:member groups:idRef="R_EPStppXF"/> + <groups:member groups:idRef="R_UAGPT3"/> + <groups:member groups:idRef="R_KDOPS"/> + <groups:member groups:idRef="R_3HAD80"/> + <groups:member groups:idRef="R_TDPGDH"/> + <groups:member groups:idRef="R_3OAS100"/> + <groups:member groups:idRef="R_KDOPP"/> + <groups:member groups:idRef="R_UDP4KPS"/> + <groups:member groups:idRef="R_3OAR40"/> + <groups:member groups:idRef="R_MOAT2XF"/> + <groups:member groups:idRef="R_3OAS60"/> + <groups:member groups:idRef="R_FACOAE160"/> + <groups:member groups:idRef="R_UAGDP"/> + <groups:member groups:idRef="R_FACOAE161"/> + <groups:member groups:idRef="R_MAN1PT2r"/> + <groups:member groups:idRef="R_FACOAL140t2pp"/> + <groups:member groups:idRef="R_U23GAATXF"/> + <groups:member groups:idRef="R_3HAD161"/> + <groups:member groups:idRef="R_TDSKXF"/> + <groups:member groups:idRef="R_3HAD160"/> + <groups:member groups:idRef="R_PAPPT3"/> + <groups:member groups:idRef="R_HEPT1"/> + <groups:member groups:idRef="R_MI1PP"/> + <groups:member groups:idRef="R_3OAR120"/> + <groups:member groups:idRef="R_COLIPAabctex"/> + <groups:member groups:idRef="R_HEPT3"/> + <groups:member groups:idRef="R_UDCPDPtppi"/> + <groups:member groups:idRef="R_3OAR121"/> + <groups:member groups:idRef="R_LPSS1XF"/> + <groups:member groups:idRef="R_UAMAS"/> + <groups:member groups:idRef="R_FACOAL181t2pp"/> + <groups:member groups:idRef="R_UAPGR"/> + <groups:member groups:idRef="R_UDCPDPpp"/> + <groups:member groups:idRef="R_O16A4COLIPAabctex"/> + <groups:member groups:idRef="R_UACMAMO"/> + <groups:member groups:idRef="R_LIPAabcpp"/> + <groups:member groups:idRef="R_FACOAE60"/> + <groups:member groups:idRef="R_FACOAL120t2pp"/> + <groups:member groups:idRef="R_FACOAE100"/> + <groups:member groups:idRef="R_3OAS160"/> + <groups:member groups:idRef="R_3OAS161"/> + <groups:member groups:idRef="R_UDPGLCUR4EP"/> + <groups:member groups:idRef="R_FACOAE180"/> + <groups:member groups:idRef="R_3OAR60"/> + <groups:member groups:idRef="R_FACOAE181"/> + <groups:member groups:idRef="R_PROT_LesA_BioS"/> + <groups:member groups:idRef="R_FACOAL60t2pp"/> + <groups:member groups:idRef="R_3OAS80"/> + <groups:member groups:idRef="R_3HAD141"/> + <groups:member groups:idRef="R_3HAD140"/> + <groups:member groups:idRef="R_EDTXS1XF"/> + <groups:member groups:idRef="R_T2DECAI"/> + <groups:member groups:idRef="R_ULA4NFT"/> + <groups:member groups:idRef="R_3HAD40"/> + <groups:member groups:idRef="R_UAMAGS"/> + <groups:member groups:idRef="R_3OAR180"/> + <groups:member groups:idRef="R_3OAR181"/> + <groups:member groups:idRef="R_3OAR100"/> + <groups:member groups:idRef="R_UAGCVT"/> + <groups:member groups:idRef="R_FACOAL100t2pp"/> + <groups:member groups:idRef="R_PGMT"/> + <groups:member groups:idRef="R_G1PACT"/> + <groups:member groups:idRef="R_UAGAATXF"/> + <groups:member groups:idRef="R_UHGADAXF"/> + <groups:member groups:idRef="R_TDPDRE"/> + <groups:member groups:idRef="R_FACOAE80"/> + <groups:member groups:idRef="R_3OAS140"/> + <groups:member groups:idRef="R_3OAS141"/> + <groups:member groups:idRef="R_KDOCT2"/> + <groups:member groups:idRef="R_GF6PTAr"/> + <groups:member groups:idRef="R_FACOAL160t2pp"/> + <groups:member groups:idRef="R_GALU"/> + <groups:member groups:idRef="R_TDPDRR"/> + <groups:member groups:idRef="R_UDPXYLS"/> + <groups:member groups:idRef="R_ACGAMT"/> + <groups:member groups:idRef="R_3OAR80"/> + <groups:member groups:idRef="R_MOATXF"/> + <groups:member groups:idRef="R_UDPGDr"/> + <groups:member groups:idRef="R_FACOAE120"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Tyrosine__Tryptophan__and_Phenylalanine_Metabolism" groups:kind="classification" groups:name="Tyrosine__Tryptophan__and_Phenylalanine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_QUINDH"/> + <groups:member groups:idRef="R_IGPS"/> + <groups:member groups:idRef="R_TRPS2"/> + <groups:member groups:idRef="R_TYRTA"/> + <groups:member groups:idRef="R_DHQD"/> + <groups:member groups:idRef="R_ANPRT"/> + <groups:member groups:idRef="R_SHKK"/> + <groups:member groups:idRef="R_PPNDH"/> + <groups:member groups:idRef="R_PPND"/> + <groups:member groups:idRef="R_PHETA1"/> + <groups:member groups:idRef="R_CHORS"/> + <groups:member groups:idRef="R_SHK3Dr"/> + <groups:member groups:idRef="R_CHORM"/> + <groups:member groups:idRef="R_ANS"/> + <groups:member groups:idRef="R_DDPA"/> + <groups:member groups:idRef="R_PSCVT"/> + <groups:member groups:idRef="R_DHQS"/> + <groups:member groups:idRef="R_TRPS3r"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Valine__Leucine__and_Isoleucine_Metabolism" groups:kind="classification" groups:name="Valine__Leucine__and_Isoleucine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ILETA"/> + <groups:member groups:idRef="R_IPMDr"/> + <groups:member groups:idRef="R_KARA1"/> + <groups:member groups:idRef="R_THRD_L"/> + <groups:member groups:idRef="R_ACHBS"/> + <groups:member groups:idRef="R_IPPMIb"/> + <groups:member groups:idRef="R_DHAD2"/> + <groups:member groups:idRef="R_IPPMIa"/> + <groups:member groups:idRef="R_DHAD1"/> + <groups:member groups:idRef="R_MOPG"/> + <groups:member groups:idRef="R_ACLS"/> + <groups:member groups:idRef="R_VALTA"/> + <groups:member groups:idRef="R_LEUTA"/> + <groups:member groups:idRef="R_KARA2"/> + <groups:member groups:idRef="R_IPPS"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cysteine_Metabolism" groups:kind="classification" groups:name="Cysteine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PAPSR"/> + <groups:member groups:idRef="R_SULRi"/> + <groups:member groups:idRef="R_BPNT"/> + <groups:member groups:idRef="R_CYSSADS"/> + <groups:member groups:idRef="R_AMPTASECG"/> + <groups:member groups:idRef="R_SERAT"/> + <groups:member groups:idRef="R_SADT2"/> + <groups:member groups:idRef="R_PAPSR2"/> + <groups:member groups:idRef="R_ADSK"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Alanine_and_Aspartate_Metabolism" groups:kind="classification" groups:name="Alanine_and_Aspartate_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_DAAD"/> + <groups:member groups:idRef="R_ASPT"/> + <groups:member groups:idRef="R_ASPTA"/> + <groups:member groups:idRef="R_ALATA_L"/> + <groups:member groups:idRef="R_ASNN"/> + <groups:member groups:idRef="R_ASNS1"/> + <groups:member groups:idRef="R_ALAR"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Methylglyoxal_degradation" groups:kind="classification" groups:name="Methylglyoxal_degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_GLYOX"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glutamate_Metabolism" groups:kind="classification" groups:name="Glutamate_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ORNTA"/> + <groups:member groups:idRef="R_ACCITRH"/> + <groups:member groups:idRef="R_GLUN"/> + <groups:member groups:idRef="R_ACOCMT"/> + <groups:member groups:idRef="R_P5CG"/> + <groups:member groups:idRef="R_GLUDxi"/> + <groups:member groups:idRef="R_CMPA_1"/> + <groups:member groups:idRef="R_ACGS"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Folate_Metabolism" groups:kind="classification" groups:name="Folate_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_MTHFR2"/> + <groups:member groups:idRef="R_FTHFD"/> + <groups:member groups:idRef="R_GLYCL"/> + <groups:member groups:idRef="R_FOMETR"/> + <groups:member groups:idRef="R_MTHFD"/> + <groups:member groups:idRef="R_MTHFC"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cysteine_and_methionine_metabolism" groups:kind="classification" groups:name="Cysteine_and_methionine_metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_MTRI"/> + <groups:member groups:idRef="R_ARD"/> + <groups:member groups:idRef="R_MDRPDr"/> + <groups:member groups:idRef="R_ARD2"/> + <groups:member groups:idRef="R_ENOPH"/> + <groups:member groups:idRef="R_MTAP"/> + </groups:listOfMembers> + </groups:group> + </groups:listOfGroups> + <listOfUnitDefinitions> + <unitDefinition id="mmol_per_gDW_per_hr" name="mmol_per_gDW_per_hr"> + <listOfUnits> + <unit exponent="-1" kind="gram" multiplier="1" scale="0"/> + <unit exponent="1" kind="mole" multiplier="1" scale="-3"/> + <unit exponent="-1" kind="second" multiplier="0.00027777" scale="0"/> + </listOfUnits> + </unitDefinition> + </listOfUnitDefinitions> + <listOfCompartments> + <compartment constant="false" id="p" metaid="_43be7dad-5b92-450e-be6a-a69cbf6b295d" name="p" spatialDimensions="3"/> + <compartment constant="false" id="c" metaid="_37f973ef-d0be-4203-9777-e037f1222d90" name="c" spatialDimensions="3"/> + <compartment constant="false" id="e" metaid="b4d9b2bb-d72a-4183-9081-ce1b23ce885c" name="e" spatialDimensions="3"/> + </listOfCompartments> + <listOfSpecies> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H29O2" hasOnlySubstanceUnits="true" id="M_hdcea_c" metaid="_83a30aa3-d844-48f9-a634-0d61506245d3" name="M_hdcea_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H29O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H29O2" hasOnlySubstanceUnits="true" id="M_hdcea_e" metaid="_5b81de6a-46d4-4aa1-b51a-a61989930aa1" name="Hexadecenoate__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H29O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H29N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ohexACP_c" metaid="_09cc2866-3763-4a58-b634-1e9391011c2c" name="3_Oxohexanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H29N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO6" hasOnlySubstanceUnits="true" id="M_sucgsa_c" metaid="_95bdb449-54c9-4128-a9b7-5d7bee0b8728" name="M_sucgsa_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11NO6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H21N5O15P2" hasOnlySubstanceUnits="true" id="M_gdpddman_c" metaid="_5621cf38-5dfc-4cf2-b7e3-283d7235c86b" name="GDP_4_dehydro_6_deoxy_D_mannose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H21N5O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H13N2O2" hasOnlySubstanceUnits="true" id="M_orn_p" metaid="c3c6cd96-69bb-4134-bd0d-223a4a770348" name="Ornithine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H13N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO4" hasOnlySubstanceUnits="true" id="M_glu_D_c" metaid="_71a68abb-5db5-4c53-91d2-24a2e4beab94" name="D_Glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="MoO4" hasOnlySubstanceUnits="true" id="M_mobd_e" metaid="_42cec621-b997-409f-ae61-2b06e193e88c" name="Molybdate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: MoO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O8P" hasOnlySubstanceUnits="true" id="M_g3pg_c" metaid="_4195cc12-3ead-499a-babc-f43402625ce1" name="Glycerophosphoglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H14O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_h2o_p" metaid="_1d2341b1-a141-4a22-bd62-fa338f7f2346" name="H2O" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O8P" hasOnlySubstanceUnits="true" id="M_g3pg_e" metaid="_2afa5d9d-9d23-45cd-a848-5b2daa9ce630" name="Glycerophosphoglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H14O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaasp_c" metaid="_81402407-ed90-4c32-b133-7c1b5a2e1a6e" name="tRNA_Asp_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Ni" hasOnlySubstanceUnits="true" id="M_ni2_p" metaid="c63ab7cd-3059-44f4-ae8f-9b967625ebca" name="nickel" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ni</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H74N1O8P1" hasOnlySubstanceUnits="true" id="M_pe160_c" metaid="_59c509d6-1751-4e87-b01c-14cf34ac9b4c" name="phosphatidylethanolamine__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H74N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H31N2O8PRS" hasOnlySubstanceUnits="true" id="M_hexACP_c" metaid="d3d3b718-243e-4d20-b658-13f3bb77c444" name="Hexanoyl_ACP__n_C6_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H31N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="MoO4" hasOnlySubstanceUnits="true" id="M_mobd_c" metaid="cf476b69-9c74-45db-bf2b-145a2fd50ba3" name="Molybdate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: MoO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C77H117N15O40" hasOnlySubstanceUnits="true" id="M_murein5px4p_p" metaid="c53ad754-9f5c-4984-af4c-6b2b5e446284" name="two_disacharide_linked_murein_units__pentapeptide_crosslinked_tetrapeptide__A2pm__D_ala___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C77H117N15O40</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H10O3" hasOnlySubstanceUnits="true" id="M_dmoxpol_c" metaid="beb0eb5d-519f-4b06-8171-7dc4a7d1af7b" name="Dimethoxyphenol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H10O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H74N1O8P1" hasOnlySubstanceUnits="true" id="M_pe160_p" metaid="a44dcca2-66e7-44ae-9186-978f6b1542ba" name="phosphatidylethanolamine__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H74N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Ni" hasOnlySubstanceUnits="true" id="M_ni2_e" metaid="_6949f66e-e627-4fdb-9009-56246e4dc4b0" name="nickel" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ni</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Ni" hasOnlySubstanceUnits="true" id="M_ni2_c" metaid="_40131acb-4ecf-4acd-af9c-91224f8e4960" name="nickel" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ni</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9O6" hasOnlySubstanceUnits="true" id="M_3dhq_c" metaid="_89b598af-c5d9-4d78-a32f-886d14936013" name="3_Dehydroquinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H9O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11N3O4P" hasOnlySubstanceUnits="true" id="M_hisp_c" metaid="_406b497f-432f-4b2b-a34a-075cb4a46571" name="L_Histidinol_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11N3O4P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O4" hasOnlySubstanceUnits="true" id="M_23dhmb_c" metaid="_07921bfa-da8f-4679-84dc-9765988d4938" name="R__2_3_Dihydroxy_3_methylbutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N4O9P" hasOnlySubstanceUnits="true" id="M_fprica_c" metaid="_72798c59-4852-475e-a2d5-2e972bc9ac1c" name="5_Formamido_1__5_phospho_D_ribosyl_imidazole_4_carboxamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15O2" hasOnlySubstanceUnits="true" id="M_octa_p" metaid="_30c3518e-a938-43f3-9051-a3e711f90b51" name="octanoate__n_C8_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H65N1O10P1" hasOnlySubstanceUnits="true" id="M_ps140_c" metaid="_3aa73b52-633a-48e2-b679-62294e71a142" name="phosphatidylserine__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H65N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_man6p_c" metaid="_6a1d6c5a-1a82-48c8-b683-6aaa8bc960f0" name="D_Mannose_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H15N4O9P" hasOnlySubstanceUnits="true" id="M_5aprbu_c" metaid="_956bb393-be66-4b4b-a4ba-2d429c8bd248" name="5_Amino_6__5__phosphoribitylamino_uracil" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H15N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="X" hasOnlySubstanceUnits="true" id="M_dsbdox_c" metaid="_284731a5-c739-47cf-8d77-97ce4a14ed4a" name="fused_thiol_disulfide_interchange_protein__oxidized_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O13P3" hasOnlySubstanceUnits="true" id="M_atp_c" metaid="_19cd466b-47a4-41ff-8587-533476481886" name="ATP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O13P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_fuc_L_p" metaid="_61db7a7f-c90a-4ce6-bca1-2f069f020836" name="M_fuc_L_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H15N2O3S" hasOnlySubstanceUnits="true" id="M_btn_e" metaid="_927232ea-6021-48bc-9666-ef542c59560c" name="M_btn_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H15N2O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NOSR" hasOnlySubstanceUnits="true" id="M_cystrna_c" metaid="f79ecc3e-685c-48e1-80dc-e13aa96fbbed" name="L_Cysteinyl_tRNA_Cys_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NOSR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15O2" hasOnlySubstanceUnits="true" id="M_octa_c" metaid="cc6b7289-42de-4e34-8da9-691d9ccc8500" name="octanoate__n_C8_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H15N2O3S" hasOnlySubstanceUnits="true" id="M_btn_p" metaid="_749e35e8-ab24-45d7-93ba-1afe7f049832" name="M_btn_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H15N2O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8NO4PS" hasOnlySubstanceUnits="true" id="M_4mpetz_c" metaid="cd921023-9544-4ec4-b121-887e4358d966" name="4_Methyl_5__2_phosphoethyl__thiazole" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8NO4PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H13N2O2" hasOnlySubstanceUnits="true" id="M_orn_c" metaid="c72afa0a-cfdb-4bcf-ab8d-2d7b74fb2088" name="Ornithine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H13N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NOR" hasOnlySubstanceUnits="true" id="M_valtrna_c" metaid="_4251ba8b-01cc-4752-9443-08cef24bdb93" name="L_Valyl_tRNA_Val_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnagly_c" metaid="_9c1bcdbe-60da-4ece-bd5a-0a9bf30c26b0" name="tRNA_Gly_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H13N2O2" hasOnlySubstanceUnits="true" id="M_orn_e" metaid="_86686940-58f7-40a6-b87b-9bcfb66c59e9" name="Ornithine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H13N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H36N7O19P3S" hasOnlySubstanceUnits="true" id="M_malcoame_c" metaid="_1052078b-3eba-478d-9087-7b7e0e161b42" name="malonyl_CoA_methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H36N7O19P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_h2o_e" metaid="e11a6b2b-0b7e-4a36-8a04-0af722bbf9c1" name="H2O" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H32N4O4" hasOnlySubstanceUnits="true" id="M_ppp9_c" metaid="d533814d-ad29-4c19-8387-463c4c6fa319" name="Protoporphyrin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H32N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2" hasOnlySubstanceUnits="true" id="M_co2_e" metaid="_3421dea5-b95e-4be2-b898-7349691945a2" name="Carbon_dioxide_CO2" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_h2o_c" metaid="ba40bb8c-cf64-404e-9faa-1c5435e09c2c" name="H2O" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H15N2O3S" hasOnlySubstanceUnits="true" id="M_btn_c" metaid="e34048c3-50fa-419d-9e5d-ac985f6fdf30" name="Biotin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H15N2O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2" hasOnlySubstanceUnits="true" id="M_co2_c" metaid="_7f7c8e07-16ce-490f-b701-6cfb7edd1cc5" name="Carbon_dioxide_CO2" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O8P" hasOnlySubstanceUnits="true" id="M_cmp_c" metaid="ce3a8631-3514-4927-a5fc-9266053df778" name="CMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H15N2O5" hasOnlySubstanceUnits="true" id="M_sucorn_c" metaid="_49eee4fa-a32f-4d62-99a1-a758a3e171b8" name="M_sucorn_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H15N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11O7P" hasOnlySubstanceUnits="true" id="M_2me4p_c" metaid="_74b04e95-84b3-4aab-94da-f8858bd56b44" name="2_C_methyl_D_erythritol_4_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C107H177N29O29S2" hasOnlySubstanceUnits="true" id="M_LesA_e" metaid="_795a3dc1-b108-47e4-82da-a966f9204c0e" name="M_LesA_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C107H177N29O29S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H61O13P2" hasOnlySubstanceUnits="true" id="M_pgp141_c" metaid="_7bc2cd0a-2755-4383-9602-b2b68e04de0e" name="Phosphatidylglycerophosphate__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H61O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C107H177N29O29S2" hasOnlySubstanceUnits="true" id="M_LesA_c" metaid="_9a311e5a-f85b-4af7-83b1-307bb1e1a41e" name="M_LesA_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C107H177N29O29S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H24N10O21P4" hasOnlySubstanceUnits="true" id="M_gp4g_c" metaid="_7f862854-7604-4f31-90ef-06ec0af81a4a" name="P1_P4_Bis_5__guanosyl__tetraphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H24N10O21P4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HSe" hasOnlySubstanceUnits="true" id="M_seln_c" metaid="_7f45bce4-645d-4eb0-a162-61532f8bb480" name="Selenide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HSe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2" hasOnlySubstanceUnits="true" id="M_co2_p" metaid="e3fda4fd-1cd7-4cfc-9921-a79e27f8ce10" name="Carbon_dioxide_CO2" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H10O5" hasOnlySubstanceUnits="true" id="M_3c3hmp_c" metaid="_216d7643-f563-44c8-9cd7-6c6f804a68b7" name="3_Carboxy_3_hydroxy_4_methylpentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H66N7O17P3S" hasOnlySubstanceUnits="true" id="M_stcoa_c" metaid="bded8546-6745-4b87-a769-96038f1148b6" name="Stearoyl_CoA__n_C18_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H66N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C44H79N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdhdecg_c" metaid="_71e9eef0-13ec-4a15-ae4e-41e4f8012ba2" name="CDP_1_2_dihexadecanoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C44H79N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H61O13P2" hasOnlySubstanceUnits="true" id="M_pgp141_p" metaid="f1441528-9bed-4ed1-81d1-40a0e3d45edf" name="Phosphatidylglycerophosphate__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H61O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H12O11P" hasOnlySubstanceUnits="true" id="M_kdo8p_c" metaid="_3870b262-b055-423b-82f9-cceb24028cf0" name="3_Deoxy_D_manno_octulosonate_8_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H12O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H21N4O9P" hasOnlySubstanceUnits="true" id="M_fmnh2_c" metaid="fbc52601-3142-4153-a874-df831c3329e3" name="Reduced_FMN" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H21N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_f1p_c" metaid="_732925ea-c862-44b5-b095-fc72f48c84c1" name="D_Fructose_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C80H124N16O42" hasOnlySubstanceUnits="true" id="M_murein5p5p_p" metaid="_767502c9-bffc-4038-9454-353c3eec46b5" name="two_linked_disacharide_pentapeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C80H124N16O42</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H63O8P" hasOnlySubstanceUnits="true" id="M_pa161_p" metaid="_859222c2-bac6-476c-aec6-1e01bb937695" name="1_2_dihexadec_9_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H63O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H25N2O8PRS" hasOnlySubstanceUnits="true" id="M_but2eACP_c" metaid="e30db6f9-3447-42ac-bfd6-6c005ac804b3" name="But_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H25N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H58N7O17P3S" hasOnlySubstanceUnits="true" id="M_tdcoa_c" metaid="_40b38630-6ac7-4df3-b3d1-b8b6c5937bf9" name="Tetradecanoyl_CoA__n_C14_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H58N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C107H177N29O29S2" hasOnlySubstanceUnits="true" id="M_LesA_p" metaid="fab00509-5733-4be1-812b-dcd3bf58f433" name="M_LesA_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C107H177N29O29S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H18O11P" hasOnlySubstanceUnits="true" id="M_g3pi_p" metaid="_0c73fa4a-1bce-4d13-84df-e0da19418edc" name="sn_Glycero_3_phospho_1_inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H18O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H29O7P1" hasOnlySubstanceUnits="true" id="M_1ddecg3p_c" metaid="ecffca5d-e302-4a6b-831c-ea3a5c41242e" name="1_dodecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H29O7P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H63O8P" hasOnlySubstanceUnits="true" id="M_pa161_c" metaid="_435728ef-032c-4a1e-b01c-fa04d674b275" name="1_2_dihexadec_9_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H63O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C49H76O4" hasOnlySubstanceUnits="true" id="M_q8h2_c" metaid="_4974a112-1b7c-4849-ba38-76daac76671f" name="Ubiquinol_8" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C49H76O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C940H1548N8O661P8" hasOnlySubstanceUnits="true" id="M_core_kdo2lip6_XF_p" metaid="cff7fb8f-ce56-4a84-acd8-a2651d1805c3" name="M_core_kdo2lip6_XF_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C940H1548N8O661P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="HPO4" hasOnlySubstanceUnits="true" id="M_pi_e" metaid="_42bc2734-835b-4640-9646-02c816f521ca" name="Phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HPO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C71H109N13O39" hasOnlySubstanceUnits="true" id="M_murein4p3p_p" metaid="f8f7d39e-bdaa-4ee9-814d-c0b4ec9160f5" name="two_linked_disacharide_tetrapeptide_and_tripeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C71H109N13O39</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="HPO4" hasOnlySubstanceUnits="true" id="M_pi_p" metaid="_61d6192c-12fb-4874-8564-e8046e4c5c4b" name="Phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HPO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O2" hasOnlySubstanceUnits="true" id="M_ac_p" metaid="_5b78739f-a245-49b5-a6c1-569bfc8d4190" name="Acetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H23N5O15P2" hasOnlySubstanceUnits="true" id="M_gdp6dm_c" metaid="f67b76aa-cca5-41d4-aa13-b154bd82377c" name="M_gdp6dm_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H23N5O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaser_c" metaid="_94ef3223-799e-471a-a1c8-613e870c7f5d" name="tRNA_Ser_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H18O11P" hasOnlySubstanceUnits="true" id="M_g3pi_c" metaid="fc2173d0-12bd-44f8-89a1-2a39027bfe36" name="sn_Glycero_3_phospho_1_inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H18O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H27N3O15" hasOnlySubstanceUnits="true" id="M_enter_c" metaid="e0461604-6ffb-422a-b6b7-7b113fa01607" name="M_enter_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H27N3O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H18O11P" hasOnlySubstanceUnits="true" id="M_g3pi_e" metaid="_4b9027db-81ed-47db-90e0-74b9277095ad" name="sn_Glycero_3_phospho_1_inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H18O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H27N3O15" hasOnlySubstanceUnits="true" id="M_enter_e" metaid="_5703cd1f-aea5-4cf1-8f7d-5f9cf0f72c8d" name="M_enter_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H27N3O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaasn_c" metaid="_1e5964c2-05d7-4d2a-a5b9-dec66466ab0e" name="M_trnaasn_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="R" hasOnlySubstanceUnits="true" id="M_CopA_p" metaid="_12b71ebf-a259-4f49-8429-b7845a88e872" name="Protein_CopA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H30N6O12S2" hasOnlySubstanceUnits="true" id="M_gthox_c" metaid="c7bf02ef-66b8-4dc1-9026-53fec7f7feee" name="Oxidized_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H30N6O12S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C940H1548N8O661P8" hasOnlySubstanceUnits="true" id="M_core_kdo2lip6_XF_c" metaid="_523bd485-6a20-4c1c-ba49-a4bcd8e839f5" name="M_core_kdo2lip6_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C940H1548N8O661P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C940H1548N8O661P8" hasOnlySubstanceUnits="true" id="M_core_kdo2lip6_XF_e" metaid="_3c4b17e4-1a58-4d30-a679-831996c94151" name="M_core_kdo2lip6_XF_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C940H1548N8O661P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H27N2O11PRS" hasOnlySubstanceUnits="true" id="M_ogmeACP_c" metaid="_83613f5f-54e6-4465-b92a-7751cae06841" name="3_Oxo_glutaryl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H27N2O11PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaleu_c" metaid="_107bbd4f-b67f-4387-9455-7b833fcf6e1e" name="tRNA_Leu_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnalys_c" metaid="_79f3e812-04d9-429e-be7d-00d183252771" name="tRNA_Lys_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O6P" hasOnlySubstanceUnits="true" id="M_g3p_c" metaid="_2455d675-97e0-427d-80b5-ef339cc6e2ac" name="Glyceraldehyde_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H27N3O15" hasOnlySubstanceUnits="true" id="M_enter_p" metaid="_36d171ac-68e5-47ea-84de-7f657cad5803" name="M_enter_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H27N3O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2Se" hasOnlySubstanceUnits="true" id="M_selcys_c" metaid="_2ef535bc-d692-4e1e-9cc9-ce51d614b918" name="M_selcys_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O3" hasOnlySubstanceUnits="true" id="M_acorn_c" metaid="_2df9a240-cce3-45d5-92ab-8d8b55b249ba" name="N2_Acetyl_L_ornithine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HPO4" hasOnlySubstanceUnits="true" id="M_pi_c" metaid="b321ede9-f332-40f5-bd9c-8757e9fae686" name="Phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HPO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H30N6O12S2" hasOnlySubstanceUnits="true" id="M_gthox_e" metaid="cb7ad6c5-1d9d-46be-985b-1580063ca9d6" name="Oxidized_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H30N6O12S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2R" hasOnlySubstanceUnits="true" id="M_sertrna_sec_c" metaid="_813b9900-7e83-4d33-8f58-d813654969ef" name="M_sertrna_sec_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11NO4" hasOnlySubstanceUnits="true" id="M_achms_c" metaid="_654b6487-592d-4ac2-9d08-f499b6df30b3" name="O_Acetyl_L_homoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H21N7O7" hasOnlySubstanceUnits="true" id="M_10fthf_c" metaid="a18c185f-3892-48a6-9c88-b7d7fb0619e6" name="10_Formyltetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H21N7O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H32N7O16P3S" hasOnlySubstanceUnits="true" id="M_coa_c" metaid="c9061d98-c8fc-433d-a37f-e984fe545067" name="Coenzyme_A" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H32N7O16P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O2S" hasOnlySubstanceUnits="true" id="M_so2_c" metaid="_20457c4d-2162-49a6-807b-5e5f4d4227af" name="M_so2_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O" hasOnlySubstanceUnits="true" id="M_acald_p" metaid="_3d51ca32-ee50-4913-a791-0c41f0989c06" name="M_acald_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6NO4" hasOnlySubstanceUnits="true" id="M_2ogm_c" metaid="_5884f0fd-9263-47df-88ea-da40d9d374e3" name="M_2ogm_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N5O6S" hasOnlySubstanceUnits="true" id="M_amob_c" metaid="_1d835c16-17ae-4d73-93bb-36cb6d93ba15" name="S_Adenosyl_4_methylthio_2_oxobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H19N5O6S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O" hasOnlySubstanceUnits="true" id="M_acald_e" metaid="_0abd461f-9a15-4211-9311-ce43c62aab62" name="M_acald_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O" hasOnlySubstanceUnits="true" id="M_acald_c" metaid="_143625ae-b64c-4fb0-80f6-9efe13a7b9d0" name="Acetaldehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8N5O3" hasOnlySubstanceUnits="true" id="M_cph4_c" metaid="afd05253-971f-4a66-8b65-5ac1f306509d" name="6_carboxy_5_6_7_8_tetrahydropterin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H8N5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H24N2O16P2" hasOnlySubstanceUnits="true" id="M_dtdpglu_c" metaid="_0bba1122-5723-4fd3-8f21-e2e91020abec" name="dTDPglucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H24N2O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O7PS" hasOnlySubstanceUnits="true" id="M_5mdr1p_c" metaid="_184f9078-bb7d-46cf-8a62-b5539976b76d" name="M_5mdr1p_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O7PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C55H89O7P2" hasOnlySubstanceUnits="true" id="M_udcpdp_c" metaid="ad0e2184-1624-418e-9618-17b79197331f" name="Undecaprenyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C55H89O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Mg" hasOnlySubstanceUnits="true" id="M_mg2_c" metaid="_8d2dc306-1ffd-4add-8283-c1b37704bcb9" name="Magnesium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mg</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H21N7O7" hasOnlySubstanceUnits="true" id="M_5fthf_c" metaid="acdfb364-95bd-4e0e-a46f-f1920c900da7" name="5_Formyltetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H21N7O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H49N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hcpalm9eACP_c" metaid="f543c9a3-fd16-4ccb-9272-7617c7a973f0" name="R__3_hydroxy_cis_palm_9_eoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H49N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H82NO8P" hasOnlySubstanceUnits="true" id="M_pe180_c" metaid="_4048579e-4f31-481a-947b-5325a88a525f" name="phosphatidylethanolamine__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41H82NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="S4Fe4" hasOnlySubstanceUnits="true" id="M_4fe4s_c" metaid="_9b98389e-5f17-43b1-97af-987fda6edd76" name="4Fe_4S__iron_sulfur_cluster" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: S4Fe4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Mg" hasOnlySubstanceUnits="true" id="M_mg2_e" metaid="_6204c224-60fd-496c-ae7d-3a640cf96806" name="Magnesium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mg</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O5" hasOnlySubstanceUnits="true" id="M_gsn_c" metaid="_675aea4f-9d89-4316-b21d-8835e7bdf088" name="Guanosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5O" hasOnlySubstanceUnits="true" id="M_gua_p" metaid="bd079a49-4a78-4596-b5a4-e1e2e0ce31a1" name="M_gua_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="S" hasOnlySubstanceUnits="true" id="M_s_c" metaid="_0abe441f-373f-44a8-a346-438e07c487ed" name="M_s_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="S" hasOnlySubstanceUnits="true" id="M_s_e" metaid="_02ce892b-ee70-4605-826f-fac5cfb92aa4" name="M_s_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H23N6O5S" hasOnlySubstanceUnits="true" id="M_amet_c" metaid="_05c3b996-37d0-476c-bd6b-8e86a72850b0" name="S_Adenosyl_L_methionine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H23N6O5S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C800H1302N100O501" hasOnlySubstanceUnits="true" id="M_chitin_polymer_e" metaid="_2f386823-86f0-417b-a5d8-4ddbd63d6fe5" name="M_chitin_polymer_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C800H1302N100O501</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H82NO8P" hasOnlySubstanceUnits="true" id="M_pe180_p" metaid="_4aa176f4-546c-4bce-bbbc-259d7819815a" name="phosphatidylethanolamine__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41H82NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H12N3O7P" hasOnlySubstanceUnits="true" id="M_air_c" metaid="bafef441-55b1-482a-83ef-2628e0331c85" name="5_amino_1__5_phospho_D_ribosyl_imidazole" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H12N3O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H57N1O10P1" hasOnlySubstanceUnits="true" id="M_ps120_c" metaid="_7286fb91-0c02-49b2-9a94-7e458d73ae30" name="phosphatidylserine__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H57N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N2OR" hasOnlySubstanceUnits="true" id="M_lystrna_c" metaid="adb25803-b9e7-4b8b-a860-1b9ffd6ad032" name="L_Lysine_tRNA__Lys_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N2OR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5O" hasOnlySubstanceUnits="true" id="M_gua_e" metaid="b20f58dc-f884-461b-a907-84d41e230386" name="M_gua_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5O" hasOnlySubstanceUnits="true" id="M_gua_c" metaid="_8174d229-a534-4c7b-b1e1-9157c17c78fb" name="Guanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Mg" hasOnlySubstanceUnits="true" id="M_mg2_p" metaid="_3478a092-b7f3-4a06-b4b7-2932b0c98361" name="Magnesium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mg</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO2R" hasOnlySubstanceUnits="true" id="M_tyrtrna_c" metaid="_104ba3cc-a31b-4300-b87d-1d71d75e5eb4" name="L_Tyrosyl_tRNA_Tyr_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11NO2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H20N4O6" hasOnlySubstanceUnits="true" id="M_ribflv_c" metaid="_355d6a80-123c-435c-86bd-93b68e593626" name="Riboflavin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H20N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H20N2O9PS" hasOnlySubstanceUnits="true" id="M_4ppcys_c" metaid="_2279bafc-1eda-409b-8625-74311a00675d" name="N___R__4_Phosphopantothenoyl__L_cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H20N2O9PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H65O7P2" hasOnlySubstanceUnits="true" id="M_octdp_c" metaid="_699d66d7-799f-41db-829e-575eb4fd5124" name="all_trans_Octaprenyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C40H65O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H30N6O12S2" hasOnlySubstanceUnits="true" id="M_gthox_p" metaid="_26ddbc66-1814-4d9a-99fa-e789983744f4" name="Oxidized_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H30N6O12S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H7N2O3" hasOnlySubstanceUnits="true" id="M_4izp_c" metaid="_35b8c0ec-00e3-478a-8b32-e6ea450f48ca" name="4_Imidazolone_5_propanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H7N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5N4O3" hasOnlySubstanceUnits="true" id="M_cdg_c" metaid="ba9e8d8e-5f5a-4d46-a4eb-ee9bc01d6cc8" name="7_deaza_7_carboxyguanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5N4O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="true" id="M_BIOMASS_XF_c" metaid="_977000d3-3f7b-4a5e-9b66-f76349244748" name="M_BIOMASS_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O6" hasOnlySubstanceUnits="true" id="M_2ins_c" metaid="_18dda0b7-ffe4-4fbe-bea5-0c48a7b1fba9" name="2_Inosose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H6NO2" hasOnlySubstanceUnits="true" id="M_4abz_c" metaid="c3252fbe-8ecb-4cea-a46e-72ae990ae870" name="4_Aminobenzoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H6NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N5O14P2" hasOnlySubstanceUnits="true" id="M_prbamp_c" metaid="_9b62d40a-b552-45b2-bcaa-e6abfc107cf8" name="1__5_Phosphoribosyl__AMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H19N5O14P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="MoO4" hasOnlySubstanceUnits="true" id="M_mobd_p" metaid="ddf06dd7-4534-41b4-b9f5-4bfa80feb7e8" name="Molybdate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: MoO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O2" hasOnlySubstanceUnits="true" id="M_ac_c" metaid="_9fa08c5e-81e9-4b89-bd09-002a3b6a40a1" name="Acetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C55H89O7P2" hasOnlySubstanceUnits="true" id="M_udcpdp_p" metaid="a5341159-851e-4f2b-8b6c-1a0bef5d110f" name="Undecaprenyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C55H89O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O2" hasOnlySubstanceUnits="true" id="M_ac_e" metaid="b8c75f41-aa81-415f-adca-07a804537370" name="Acetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7O2S" hasOnlySubstanceUnits="true" id="M_mtpp_c" metaid="_5168e61b-5473-429a-af16-459b37a372fa" name="M_mtpp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7O2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H45N2O9PRS" hasOnlySubstanceUnits="true" id="M_3omrsACP_c" metaid="b6f11f96-e986-4bb4-8cfa-769c56fd0286" name="3_Oxotetradecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H45N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H28N2O11" hasOnlySubstanceUnits="true" id="M_chtbs_e" metaid="bfff0b3d-04c2-4d68-be9f-36697be6f607" name="N_N_diacetylchitobiose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H28N2O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6N2O5" hasOnlySubstanceUnits="true" id="M_cbasp_c" metaid="_1955851f-53a2-41d8-810e-c6a10d53f245" name="N_Carbamoyl_L_aspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H28N2O11" hasOnlySubstanceUnits="true" id="M_chtbs_c" metaid="_95bfee1b-96ad-46c3-ad16-1dec0a80adde" name="N_N_diacetylchitobiose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H28N2O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P" hasOnlySubstanceUnits="true" id="M_g3pc_c" metaid="_618ce2bf-2ed0-4cb8-aaa2-7c81d5cc9570" name="sn_Glycero_3_phosphocholine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H20NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H69O13P2" hasOnlySubstanceUnits="true" id="M_pgp161_c" metaid="_4c529996-78c3-4952-99e8-fba13ecc8f9f" name="Phosphatidylglycerophosphate__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H69O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="H2S" hasOnlySubstanceUnits="true" id="M_h2s_p" metaid="fae23ffb-3137-4836-bcf0-8783b4e71fdc" name="Hydrogen_sulfide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P" hasOnlySubstanceUnits="true" id="M_g3pc_e" metaid="_3a4a7647-cc01-4b46-a0ed-e2caca8ae008" name="sn_Glycero_3_phosphocholine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H20NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H23O2" hasOnlySubstanceUnits="true" id="M_ddca_e" metaid="_122ad39f-5de6-42b6-ba49-0c2c3585b9f4" name="Dodecanoate__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H23O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H28N2O11" hasOnlySubstanceUnits="true" id="M_chtbs_p" metaid="d8376137-fc3d-4416-9fda-76a02f848570" name="N_N_diacetylchitobiose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H28N2O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N2O18P2" hasOnlySubstanceUnits="true" id="M_udpgalur_c" metaid="_3e478232-7397-4d11-856d-df50f0daaac3" name="M_udpgalur_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H19N2O18P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H22N3" hasOnlySubstanceUnits="true" id="M_spmd_e" metaid="ff16cf44-82b1-4346-94e1-245b42443e1a" name="Spermidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H22N3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O3" hasOnlySubstanceUnits="true" id="M_glyc_p" metaid="_6c5d646c-4449-4507-ad71-ba318ebaf4df" name="Glycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H8O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N3O4" hasOnlySubstanceUnits="true" id="M_dcyt_c" metaid="e43f2edb-9189-4fbb-a1f9-430eb760eae3" name="Deoxycytidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N3O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H23O2" hasOnlySubstanceUnits="true" id="M_ddca_c" metaid="c682527b-94e1-4c8a-87df-9517957f0965" name="Dodecanoate__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H23O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C68H102N12O37" hasOnlySubstanceUnits="true" id="M_murein3px3p_p" metaid="_476f5504-6060-4a5b-ba42-ea0c14f37e1a" name="two_disacharide_linked_murein_units__tripeptide_crosslinked_tripeptide__A2pm__A2pm___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C68H102N12O37</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C64H115N2O30P2" hasOnlySubstanceUnits="true" id="M_kdolipid4_XF_c" metaid="_8f6f558e-3e61-4022-81a0-821f62a0529c" name="M_kdolipid4_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C64H115N2O30P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H22N3" hasOnlySubstanceUnits="true" id="M_spmd_c" metaid="_1bc902f1-27a8-40e4-ac43-2f6dadec93e3" name="Spermidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H22N3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O12P2" hasOnlySubstanceUnits="true" id="M_udp_c" metaid="_886d8581-de18-42c5-b2f3-5bd554ba92bd" name="UDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O12P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H53N2O8PRS" hasOnlySubstanceUnits="true" id="M_octeACP_c" metaid="_6fc1220a-b131-4747-81f2-970e39a8f3aa" name="cis_octadec_11_enoyl__acyl_carrier_protein___n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H53N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H3N2O4" hasOnlySubstanceUnits="true" id="M_orot_c" metaid="_9892e8f7-cd75-424c-9921-d2e5441a9bf2" name="Orotate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H3N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H22N3" hasOnlySubstanceUnits="true" id="M_spmd_p" metaid="_88096ddb-8776-4948-a7de-e0cf40e74b5d" name="Spermidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H22N3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N4O2" hasOnlySubstanceUnits="true" id="M_arg_L_c" metaid="_94c434a4-5a34-4449-8db4-853c81a64cc9" name="L_Arginine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N4O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H19N4O9P" hasOnlySubstanceUnits="true" id="M_fmn_c" metaid="_5ad4d4a7-2aa3-47bd-8e30-3d523930f1e9" name="FMN" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H19N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H22N4O6" hasOnlySubstanceUnits="true" id="M_rbflvrd_c" metaid="a6e8fe44-0f41-4834-91f6-6edf74df2da0" name="M_rbflvrd_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H22N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N4O2" hasOnlySubstanceUnits="true" id="M_arg_L_e" metaid="_0c8316dc-3ba0-49d6-a957-aae85d9e7cad" name="L_Arginine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N4O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H69O13P2" hasOnlySubstanceUnits="true" id="M_pgp161_p" metaid="a0da53b8-c792-41ba-8484-f4ec21057617" name="Phosphatidylglycerophosphate__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H69O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O3" hasOnlySubstanceUnits="true" id="M_glyc_c" metaid="_9df2aff8-e262-4ebe-9101-31dd63ea3f87" name="Glycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H8O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N5O20P4" hasOnlySubstanceUnits="true" id="M_prbatp_c" metaid="f7a1bbc2-1d49-4a51-969c-3e4ea072aa16" name="1__5_Phosphoribosyl__ATP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H19N5O20P4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O11P2" hasOnlySubstanceUnits="true" id="M_cdp_c" metaid="_12dfc747-9d1d-42fc-8415-cef561969dd8" name="CDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O11P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O3" hasOnlySubstanceUnits="true" id="M_glyc_e" metaid="_36ac6ef4-5949-4647-ae8e-7d19fdfdb042" name="Glycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H8O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O4" hasOnlySubstanceUnits="true" id="M_pant_R_c" metaid="ba5bdbf6-327c-4868-bdb6-05e79154bf88" name="R__Pantoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N4O2" hasOnlySubstanceUnits="true" id="M_arg_L_p" metaid="e75fff8e-1303-4870-b151-b37a796d810c" name="L_Arginine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N4O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H62O10P1" hasOnlySubstanceUnits="true" id="M_pg141_c" metaid="_396efca1-3737-4da9-801b-835aba9e0d3b" name="Phosphatidylglycerol__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H62O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H3N2O4" hasOnlySubstanceUnits="true" id="M_orot_p" metaid="f3256e54-e8cb-4076-a633-48b7d04e0753" name="Orotate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H3N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="CHO2" hasOnlySubstanceUnits="true" id="M_for_p" metaid="_94e1c75d-9258-432e-a9f0-c5510773ae4b" name="Formate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CHO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="O4S" hasOnlySubstanceUnits="true" id="M_so4_e" metaid="_75423fa7-d028-4ccd-87fd-e54fb68a549e" name="Sulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O4S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5O6" hasOnlySubstanceUnits="true" id="M_2mcacn_c" metaid="_0369c556-1309-46b7-911c-c8ae4028fa9e" name="cis_2_Methylaconitate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H71O8P1" hasOnlySubstanceUnits="true" id="M_pa181_p" metaid="_53a3581f-53a2-4327-bd2e-d961186629d2" name="1_2_dioctadec_11_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H71O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O4S" hasOnlySubstanceUnits="true" id="M_so4_c" metaid="_5d8acb70-ed97-4be9-8bf7-0924b2df4903" name="Sulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O4S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H3N2O4" hasOnlySubstanceUnits="true" id="M_orot_e" metaid="_2a2ef40d-c0e1-43a3-b035-3f8c6aad8341" name="Orotate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H3N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="O4S" hasOnlySubstanceUnits="true" id="M_so4_p" metaid="_0e3610ce-7c67-4912-b48c-247cfa74a857" name="Sulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O4S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="H2S" hasOnlySubstanceUnits="true" id="M_h2s_e" metaid="_2a472705-813d-43ca-bc43-a33f7afca219" name="Hydrogen_sulfide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2S" hasOnlySubstanceUnits="true" id="M_h2s_c" metaid="ad954544-7662-42d5-800f-2f227ad2acaf" name="Hydrogen_sulfide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H71O8P1" hasOnlySubstanceUnits="true" id="M_pa181_c" metaid="_2726332e-0f8d-4091-a348-94bdb68d7b10" name="1_2_dioctadec_11_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H71O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H21O14P" hasOnlySubstanceUnits="true" id="M_tre6p_c" metaid="_1a6fc82e-1e0c-4fc2-99eb-4550d4c85a83" name="alpha_alpha__Trehalose_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H21O14P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O7P" hasOnlySubstanceUnits="true" id="M_dxyl5p_c" metaid="f1d8ed1b-b19b-4fde-8fcd-c8e21723c2b3" name="1_deoxy_D_xylulose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H62O10P1" hasOnlySubstanceUnits="true" id="M_pg141_p" metaid="_2a7a19c8-9350-4c9e-a897-932010c24e8e" name="Phosphatidylglycerol__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H62O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5" hasOnlySubstanceUnits="true" id="M_ade_p" metaid="_88c0f2d2-4508-4acc-bf5f-a0d5b625e467" name="Adenine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3O2" hasOnlySubstanceUnits="true" id="M_his_L_p" metaid="d0fff8a7-0697-486a-bf94-43f3a5b74cba" name="L_Histidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C63H103O11N1P2" hasOnlySubstanceUnits="true" id="M_f2Nappudp_c" metaid="bb9d8548-b26d-4f7a-b0d4-1f504d604de4" name="M_f2Nappudp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C63H103O11N1P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_fru_p" metaid="_69c8f14d-d64c-4d8c-9a77-25967c14aa76" name="D_Fructose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H2NO2" hasOnlySubstanceUnits="true" id="M_dhgly_c" metaid="_7254c1c8-5a1c-4d57-8589-aeecd451abfd" name="M_dhgly_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H2NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C33H66N1O8P1" hasOnlySubstanceUnits="true" id="M_pe140_c" metaid="_8245318c-ed8c-49d2-84fc-e779a60f1962" name="phosphatidylethanolamine__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C33H66N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3O2" hasOnlySubstanceUnits="true" id="M_his_L_e" metaid="_8f084f1e-30e1-4cb4-bcb6-460cd5e20606" name="L_Histidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3O2" hasOnlySubstanceUnits="true" id="M_his_L_c" metaid="_61773072-1fb7-4ec7-ac8f-2390ada500aa" name="L_Histidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O12P2" hasOnlySubstanceUnits="true" id="M_fdp_c" metaid="_6ccf20bf-c7be-4f81-a98e-3f4d6b73a91c" name="D_Fructose_1_6_bisphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O12P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C111H169N21O59" hasOnlySubstanceUnits="true" id="M_murein4px4p4p_p" metaid="_4cb12875-094c-41d1-94ff-bc20d2e0fbd7" name="three_disacharide_linked_murein_units__tetrapeptide_crosslinked_tetrapeptide__A2pm__D_ala___one_uncrosslinked_tetrapaptide___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C111H169N21O59</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H73N1O10P1" hasOnlySubstanceUnits="true" id="M_ps160_c" metaid="b76187c5-3735-4406-9f26-251c7ca293bc" name="phosphatidylserine__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H73N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C33H66N1O8P1" hasOnlySubstanceUnits="true" id="M_pe140_p" metaid="bf97d63f-337c-4ba2-a1db-c9d2ed5dfe73" name="phosphatidylethanolamine__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C33H66N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H7O5" hasOnlySubstanceUnits="true" id="M_3dhsk_c" metaid="_041d6376-f95e-45b0-9bdd-fac22a1cf373" name="3_Dehydroshikimate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H7O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H14N3O4" hasOnlySubstanceUnits="true" id="M_accitr_c" metaid="b0c01965-2d7a-4351-9104-cb4d34ab2630" name="M_accitr_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H14N3O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O13P3" hasOnlySubstanceUnits="true" id="M_ditp_c" metaid="dfef8771-f0e8-476f-84ae-980d23f32ed1" name="dITP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O13P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H15N5O4" hasOnlySubstanceUnits="true" id="M_thbpt4acam_c" metaid="f1c18f41-2bc6-4b31-b2ec-468cb38d0dca" name="Tetrahydrobiopterin_4a_carbinolamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H15N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C65H124O17P2" hasOnlySubstanceUnits="true" id="M_clpn140_p" metaid="d976ebdc-3b64-4c21-b18c-e8002752fbda" name="cardiolipin__tetratetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C65H124O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C34FeH30N4O4" hasOnlySubstanceUnits="true" id="M_pheme_e" metaid="_3b4e271f-4b4f-46be-b161-64021c86a3fd" name="M_pheme_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34FeH30N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O8P" hasOnlySubstanceUnits="true" id="M_ohpb_c" metaid="_43cfdd25-bc13-446b-b54b-1c3ecd101f70" name="2_Oxo_3_hydroxy_4_phosphobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H24N3O15P" hasOnlySubstanceUnits="true" id="M_ckdo_c" metaid="_7358cc12-80df-4e0c-938a-3256918f1736" name="CMP_3_deoxy_D_manno_octulosonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H24N3O15P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3" hasOnlySubstanceUnits="true" id="M_thr_L_p" metaid="ef6fc25f-dc22-448e-ac56-09bb7cd71dd7" name="L_Threonine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HSR" hasOnlySubstanceUnits="true" id="M_iscs_c" metaid="_22cb5b73-fbba-4c16-a2ed-1e9242363b30" name="IscS_sulfur_acceptor_protein" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HSR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13N2O5S" hasOnlySubstanceUnits="true" id="M_glucys_c" metaid="f236c86d-42fa-4142-b0e7-d89e523011c4" name="gamma_L_Glutamyl_L_cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H13N2O5S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12N2OR" hasOnlySubstanceUnits="true" id="M_trptrna_c" metaid="_0529dcc8-2336-4478-a8e2-4e0f631fa51b" name="L_Tryptophanyl_tRNA_Trp_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12N2OR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15O" hasOnlySubstanceUnits="true" id="M_octapb_c" metaid="f7686454-00d0-42f2-b814-35f5295d8038" name="octanoate__protein_bound_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34FeH30N4O4" hasOnlySubstanceUnits="true" id="M_pheme_c" metaid="_1abc66e7-59fa-40cd-88c1-4242cf1fa425" name="Protoheme" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34FeH30N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H3N" hasOnlySubstanceUnits="true" id="M_nh3_c" metaid="b86d4940-5cb3-4099-971b-2bcc661b41b7" name="M_nh3_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H3N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_fru_e" metaid="_4cb9c971-bd9c-48a4-a844-7414f11e8932" name="D_Fructose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H45N2O8PRS" hasOnlySubstanceUnits="true" id="M_tmrs2eACP_c" metaid="c4c1e4fd-5a97-403f-916f-593ac932e591" name="trans_Tetradec_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H45N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H14NO6P" hasOnlySubstanceUnits="true" id="M_g3pe_p" metaid="_57754263-bd27-4ea0-b4c9-9a119d3c8eed" name="sn_Glycero_3_phosphoethanolamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H14NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5" hasOnlySubstanceUnits="true" id="M_ade_e" metaid="_52f357c9-6dc1-429d-ad0d-51c134be17ad" name="Adenine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H35N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hoctACP_c" metaid="_4f206e71-6854-4ada-8bf4-c315e03c6c74" name="R__3_Hydroxyoctanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H35N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5" hasOnlySubstanceUnits="true" id="M_ade_c" metaid="_400eef5a-a6b2-4fda-bfb1-350215ef981e" name="Adenine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_tag6p_D_c" metaid="_2fdadae5-7512-4e34-a916-92f11dfbc22d" name="M_tag6p_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H24N3" hasOnlySubstanceUnits="true" id="M_na15dap_c" metaid="_64ba78a0-186c-45a2-b118-8ec27de6bd9e" name="M_na15dap_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H24N3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7N" hasOnlySubstanceUnits="true" id="M_pheacnit_c" metaid="cfd55262-5b07-4537-8d4f-7589f090f6c0" name="Phenylacetonitrile" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H7N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6O8P" hasOnlySubstanceUnits="true" id="M_4per_c" metaid="_1f658f0f-13bc-4762-bb3d-5ab2ea667f37" name="4_Phospho_D_erythronate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H56N7O17P3S" hasOnlySubstanceUnits="true" id="M_tdecoa_c" metaid="_0e92c27a-f47c-4a45-adce-07b0220da4af" name="Tetradecenoyl_CoA__n_C14_1CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H56N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O9P2" hasOnlySubstanceUnits="true" id="M_2mecdp_c" metaid="_65745c5a-9ad9-4206-88c7-5d4a1d556609" name="2_C_methyl_D_erythritol_2_4_cyclodiphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O9P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H14NO6P" hasOnlySubstanceUnits="true" id="M_g3pe_c" metaid="_904be4a7-e1c6-4224-901a-ee9c05f9bd13" name="sn_Glycero_3_phosphoethanolamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H14NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H14NO6P" hasOnlySubstanceUnits="true" id="M_g3pe_e" metaid="_5163c9e9-c52c-43a2-aa1d-5212aa0df27f" name="sn_Glycero_3_phosphoethanolamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H14NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H9O3" hasOnlySubstanceUnits="true" id="M_tmoxdpq_c" metaid="_5dc181bf-7b30-4e56-a32b-2125c3f403ac" name="tetramethoxydiphenylquinone" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H9O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H30N6O12S2Se" hasOnlySubstanceUnits="true" id="M_dgslnt_c" metaid="a265ea4f-bf5e-4aca-8bca-8b5d5c1a15d4" name="M_dgslnt_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H30N6O12S2Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H38N4O17" hasOnlySubstanceUnits="true" id="M_hmbil_c" metaid="_12277419-30ac-46b8-a5c0-7da316ff20ec" name="Hydroxymethylbilane" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C40H38N4O17</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13N2O9P" hasOnlySubstanceUnits="true" id="M_fgam_c" metaid="_6f4ac80f-34f4-49cf-97d7-f2a191e7f6bd" name="N2_Formyl_N1__5_phospho_D_ribosyl_glycinamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H13N2O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_L_c" metaid="_4ce2e4aa-b2df-43a7-8dca-aed5ebdf3607" name="L_Cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_L_e" metaid="_46466521-2bd4-405a-a792-7e71ccb6e2a2" name="L_Cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="X" hasOnlySubstanceUnits="true" id="M_dsbgox_p" metaid="_3ccba35c-1507-4ef0-beb4-8e449643c06b" name="M_dsbgox_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NOR" hasOnlySubstanceUnits="true" id="M_leutrna_c" metaid="_5a4d57a8-8d7d-4c7c-b513-ba3118976bde" name="L_Leucyl_tRNA_Leu_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H13NO9P" hasOnlySubstanceUnits="true" id="M_2cpr5p_c" metaid="b943f4bf-1162-4b51-971c-2b5ca8356d8b" name="1__2_Carboxyphenylamino__1_deoxy_D_ribulose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H13NO9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H43N2O8PRS" hasOnlySubstanceUnits="true" id="M_t3c7mrseACP_c" metaid="f3aeb5ef-5d98-4c04-83cf-f75440550e36" name="trans_3_cis_7_myristoleoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H43N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34FeH30N4O4" hasOnlySubstanceUnits="true" id="M_pheme_p" metaid="_026945df-54db-48df-be4f-6d32c2a30bc4" name="M_pheme_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34FeH30N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C57H108O17P2" hasOnlySubstanceUnits="true" id="M_clpn120_p" metaid="eadfade5-58ca-408e-a1e6-177a0f674584" name="cardiolipin__tetradodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C57H108O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H24N6O3S" hasOnlySubstanceUnits="true" id="M_ametam_c" metaid="_90a70698-c4fd-42d3-a190-fce1e543592b" name="S_Adenosylmethioninamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H24N6O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H17N4O6" hasOnlySubstanceUnits="true" id="M_argsuc_c" metaid="_548dad0d-e810-4e0c-916f-533710098c69" name="N_omega___L_Arginino_succinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H17N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H57N7O20" hasOnlySubstanceUnits="true" id="M_anhgm4p_p" metaid="ef437769-d96e-486c-a0ac-7675c9c1f6b6" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H57N7O20</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H8NO6P" hasOnlySubstanceUnits="true" id="M_pydx5p_c" metaid="a265d20f-239c-4f2b-96e4-47806c52cb44" name="Pyridoxal_5__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H8NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C36H63N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdddecg_c" metaid="_5e0de559-0d9f-4aef-bea2-0424d18015d3" name="CDP_1_2_didodecanoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C36H63N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C26H39N5O14" hasOnlySubstanceUnits="true" id="M_anhm3p_c" metaid="_09dfe524-bbda-4378-a739-2054adc3159d" name="1_6_anhydrous_N_Acetylmuramyl_tripeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C26H39N5O14</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8N3O7P2" hasOnlySubstanceUnits="true" id="M_2mahmp_c" metaid="_8f0c1114-c946-4418-90a9-839ab1169ae7" name="2_Methyl_4_amino_5_hydroxymethylpyrimidine_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8N3O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H57N7O20" hasOnlySubstanceUnits="true" id="M_anhgm4p_c" metaid="ea3dd031-aa5c-47ed-910a-0abf1490feef" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H57N7O20</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_xu5p_L_c" metaid="_23436539-9e41-4a4d-a6d2-81cd76e0feb0" name="M_xu5p_L_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8O3S" hasOnlySubstanceUnits="true" id="M_4met2obut_c" metaid="_368e95c1-6823-484a-9e7b-8cf21f3f3edb" name="M_4met2obut_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H43N2O8PRS" hasOnlySubstanceUnits="true" id="M_ddcaACP_c" metaid="a40a1259-338c-48b2-806e-4b8876626406" name="Dodecanoyl_ACP__n_C12_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H43N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H34N7O17P3S" hasOnlySubstanceUnits="true" id="M_accoa_c" metaid="dc821adc-7533-46fc-b79a-b053bc224359" name="Acetyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H34N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C22H28N9O13P3S" hasOnlySubstanceUnits="true" id="M_athtp_c" metaid="_14063840-dfe8-4359-ad41-296aff807402" name="M_athtp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C22H28N9O13P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_man_e" metaid="ea9e4baf-ac95-4edd-9e5f-f6af023440fd" name="M_man_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnatrp_c" metaid="_4133f28a-dc52-4412-a730-8785003f0495" name="tRNA_Trp_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Cd" hasOnlySubstanceUnits="true" id="M_cd2_p" metaid="_68615065-261f-4adb-90dd-4169baae9fee" name="Cadmium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cd</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C26H43O25P" hasOnlySubstanceUnits="true" id="M_EPS_XF_p" metaid="_1425e0c1-5151-429b-82d0-690b4ac59ccc" name="M_EPS_XF_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C26H43O25P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_man_p" metaid="f7ff6e43-be3c-438a-8e9b-65925ce6ea46" name="M_man_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8N5O8P2" hasOnlySubstanceUnits="true" id="M_6hmhptpp_c" metaid="_409c710f-29d6-4d07-b8f4-d87df02cb571" name="6_hydroxymethyl_dihydropterin_pyrophosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H8N5O8P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6N4O3" hasOnlySubstanceUnits="true" id="M_alltn_c" metaid="_47bab33a-0766-4505-87e4-28d8a330b249" name="Allantoin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6N4O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Cd" hasOnlySubstanceUnits="true" id="M_cd2_e" metaid="_44d6e309-8a37-487d-99c4-d0bdb19e9ec2" name="Cadmium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cd</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N2O6" hasOnlySubstanceUnits="true" id="M_uri_c" metaid="f8983947-5a36-4518-b9bf-e2aef0578fdd" name="Uridine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N2O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CH2NO5P" hasOnlySubstanceUnits="true" id="M_cbp_c" metaid="b1c48880-7eb1-4123-981b-4ee1cea764b5" name="Carbamoyl_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH2NO5P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Cd" hasOnlySubstanceUnits="true" id="M_cd2_c" metaid="_4eed35d5-b595-421f-adaf-11b88f15f818" name="Cadmium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cd</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2HO3" hasOnlySubstanceUnits="true" id="M_glx_c" metaid="_674c32f1-edd7-40d6-a8bd-5f6faae95194" name="Glyoxylate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2HO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_L_p" metaid="b7003694-442e-48bd-a6fd-13dbdfd3041b" name="L_Cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8O8P" hasOnlySubstanceUnits="true" id="M_skm5p_c" metaid="_61c0b10c-e2ef-43ea-9718-a86f1544ca6e" name="M_skm5p_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H8O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C96H172N2O41P2" hasOnlySubstanceUnits="true" id="M_kdo2lipidA_XF_p" metaid="_1099b2b6-5b56-4daa-b70e-9a2872702c32" name="M_kdo2lipidA_XF_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C96H172N2O41P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_g1p_c" metaid="f0b1a5ef-33c9-4a08-92b5-7871d31dfeec" name="D_Glucose_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H22N2O15P2" hasOnlySubstanceUnits="true" id="M_dtdp4d6dm_c" metaid="_2a63a7ff-a67f-4f69-b544-8a572a3bc467" name="dTDP_4_dehydro_6_deoxy_L_mannose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H22N2O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C96H172N2O41P2" hasOnlySubstanceUnits="true" id="M_kdo2lipidA_XF_c" metaid="_502ee221-f070-45a1-b54b-0c150d3ff782" name="M_kdo2lipidA_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C96H172N2O41P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H21O14P" hasOnlySubstanceUnits="true" id="M_suc6p_c" metaid="_7253893e-3747-45d3-a25b-3efa6dbb7ecb" name="Sucrose_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H21O14P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C48H74O4" hasOnlySubstanceUnits="true" id="M_2omhmbl_c" metaid="f209ff94-a4fd-4bf0-a0b0-794f2dc7026f" name="2_Octaprenyl_3_methyl_5_hydroxy_6_methoxy_1_4_benzoquinol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C48H74O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C96H172N2O41P2" hasOnlySubstanceUnits="true" id="M_kdo2lipidA_XF_e" metaid="_69303646-b652-47d7-b28c-a06b743379f5" name="M_kdo2lipidA_XF_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C96H172N2O41P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C77H139N2O38P3" hasOnlySubstanceUnits="true" id="M_hphhlipidA_XF_c" metaid="_3e5799d3-05f9-4a49-96cc-7de3d1cc505c" name="M_hphhlipidA_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C77H139N2O38P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N2O5" hasOnlySubstanceUnits="true" id="M_duri_c" metaid="_34107222-3dde-46bf-9616-4a1acfd462f1" name="Deoxyuridine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc2p_p" metaid="_57e43951-ed1a-4e31-820d-96d129a5db07" name="Glycerol_2_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H41N2O8PRS" hasOnlySubstanceUnits="true" id="M_tddec2eACP_c" metaid="_59c66f20-37e6-4161-8b60-c809a99967cb" name="trans_Dodec_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H41N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnagln_c" metaid="dfb26a16-0150-4829-98dd-75d71683c2c5" name="tRNA_Gln_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H27FeN3O15" hasOnlySubstanceUnits="true" id="M_feenter_e" metaid="_06f569a1-82b1-43b5-b046-026c0df888af" name="M_feenter_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H27FeN3O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O4S2R4" hasOnlySubstanceUnits="true" id="M_trdox_c" metaid="cf02ed71-77c9-4b39-80b2-51932a2f7eca" name="Oxidized_thioredoxin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N4O4S2R4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O8P" hasOnlySubstanceUnits="true" id="M_g3pg_p" metaid="e47dbb18-e115-41f7-9384-3cc6a6e3458c" name="Glycerophosphoglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H14O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H29O2" hasOnlySubstanceUnits="true" id="M_hdcea_p" metaid="_90416f38-abc8-4831-829d-60e30cc03e11" name="Hexadecenoate__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H29O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C26H43O25P" hasOnlySubstanceUnits="true" id="M_EPS_XF_e" metaid="_2dac150b-c2bc-4097-92ab-2c0d40f43e0b" name="M_EPS_XF_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C26H43O25P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc2p_e" metaid="e1acabc2-2018-4e6b-97d6-976018236dfe" name="Glycerol_2_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H27FeN3O15" hasOnlySubstanceUnits="true" id="M_feenter_p" metaid="_9c8ce71a-2f18-4327-ad3f-83dd1397a99c" name="M_feenter_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H27FeN3O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H7O3" hasOnlySubstanceUnits="true" id="M_phpyr_c" metaid="a97a873d-235e-43f9-8f4f-ccc996e10f53" name="Phenylpyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H7O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H39N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hdecACP_c" metaid="_7df5fb06-d0db-476d-ab24-9362bd3fbfaf" name="S__3_Hydroxydecanoyl__acyl_carrier_protein" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H39N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C26H43O25P" hasOnlySubstanceUnits="true" id="M_EPS_XF_c" metaid="_4ec00c07-8dd8-42fd-8e51-fae404b3a71b" name="M_EPS_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C26H43O25P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc2p_c" metaid="_88c71068-60b9-4b38-88fe-4ea34f0dac5a" name="Glycerol_2_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H23O2" hasOnlySubstanceUnits="true" id="M_ddca_p" metaid="_4d96532d-03b0-4b58-887f-70241760ab8b" name="Dodecanoate__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H23O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2S" hasOnlySubstanceUnits="true" id="M_hcys_L_c" metaid="_4cf57846-c9a4-42d7-9458-b50552789a85" name="L_Homocysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H14N2O5" hasOnlySubstanceUnits="true" id="M_thymd_c" metaid="_0ae5c203-0786-41f7-9cc0-7b9349cf63a2" name="Thymidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H14N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Cl" hasOnlySubstanceUnits="true" id="M_cl_p" metaid="a85023b1-6044-4628-88e4-6505990be08b" name="Chloride" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cl</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HSR" hasOnlySubstanceUnits="true" id="M_sufse_c" metaid="c65b45a3-b9bd-4356-be1d-95a6ad9649b2" name="M_sufse_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HSR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H4O7P" hasOnlySubstanceUnits="true" id="M_3pg_c" metaid="_7c850fdc-7ee4-4131-8713-1c4e7db33ef9" name="3_Phospho_D_glycerate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H4O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="RH2" hasOnlySubstanceUnits="true" id="M_etfrd_c" metaid="bc7d1494-f2e3-4392-a6b4-20e2abdfe54f" name="Electron_transfer_flavoprotein_reduced" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: RH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H49N2O9PRS" hasOnlySubstanceUnits="true" id="M_3opalmACP_c" metaid="d03ccd95-0ad8-40a6-99ec-cff5d909c168" name="3_Oxohexadecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H49N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H38N7O18P3S" hasOnlySubstanceUnits="true" id="M_r3hbcoa_c" metaid="_7091ffad-7925-4b77-97de-67b2358b790e" name="R__3_Hydroxybutanoyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H38N7O18P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H21N5O14P2" hasOnlySubstanceUnits="true" id="M_adprib_c" metaid="_8447d936-9b96-4794-adad-6e64e8be25e9" name="ADPribose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H21N5O14P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H25N3O17P2" hasOnlySubstanceUnits="true" id="M_uacmam_c" metaid="_87ee04d6-6c04-42fb-99a4-635593f51ae1" name="UDP_N_acetyl_D_mannosamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H25N3O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H20N2O16P2" hasOnlySubstanceUnits="true" id="M_udpxyl_c" metaid="_121290d7-eee1-43b4-9cc3-5cac99592dba" name="UDP_D_xylose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H20N2O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C56H105N2O20P" hasOnlySubstanceUnits="true" id="M_lipidAds_XF_c" metaid="fdd44c49-62fd-40fe-a8f0-de3f2a5cf27f" name="M_lipidAds_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C56H105N2O20P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15NO6" hasOnlySubstanceUnits="true" id="M_acgam_c" metaid="_929cca87-4c08-439f-8e38-8d760db037eb" name="N_Acetyl_D_glucosamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15NO6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H44N6O15" hasOnlySubstanceUnits="true" id="M_anhm4p_c" metaid="_55dc95a9-9c90-4e47-ac05-b51200af8681" name="1_6_anhydrous_N_Acetylmuramyl_tetrapeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H44N6O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H8NO2" hasOnlySubstanceUnits="true" id="M_ind3ac_c" metaid="c05f427b-cebf-48fc-881b-2db18a86688c" name="Indole_3_acetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H8NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Cl" hasOnlySubstanceUnits="true" id="M_cl_e" metaid="_8de57525-7850-4331-955a-593d97aa5cd9" name="Chloride" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cl</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8NO7P" hasOnlySubstanceUnits="true" id="M_phthr_c" metaid="_688ae74e-7e6c-444f-8ac7-ef9a56c07efc" name="O_Phospho_4_hydroxy_L_threonine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H8NO7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H41N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hcddec5eACP_c" metaid="e8ad6c5c-ffcf-4c14-bf13-617ce96feeaa" name="R__3_hydroxy_cis_dodec_5_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H41N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H7NO4" hasOnlySubstanceUnits="true" id="M_thdp_c" metaid="_1b78ecb9-a1be-43a5-9061-6b31d460fca8" name="2_3_4_5_Tetrahydrodipicolinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H7NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C73H140O17P2" hasOnlySubstanceUnits="true" id="M_clpn160_p" metaid="be613459-f8dd-4b09-893a-2559577ca2fe" name="cardiolipin__tetrahexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C73H140O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15NO6" hasOnlySubstanceUnits="true" id="M_acgam_p" metaid="ebd83331-b18c-41b4-a44b-059dcf479c03" name="M_acgam_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15NO6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H29N2O8PRS" hasOnlySubstanceUnits="true" id="M_thex2eACP_c" metaid="e378c6d1-fb50-4d2c-be3f-7d9d0026a9d0" name="trans_Hex_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H29N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H41N4O16" hasOnlySubstanceUnits="true" id="M_dscl_c" metaid="ea6c4aa1-cc4d-4ada-87f2-809ebb395fa8" name="dihydrosirohydrochlorin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H41N4O16</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C70H127N2O32P3" hasOnlySubstanceUnits="true" id="M_phhlipidA_XF_c" metaid="c96f56b7-b608-43d3-a6a1-356c9ba4b3e0" name="M_phhlipidA_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C70H127N2O32P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N5O13P2S" hasOnlySubstanceUnits="true" id="M_paps_c" metaid="f209ccf7-0a4e-4739-a0cd-7b1df95736a6" name="3__Phosphoadenylyl_sulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N5O13P2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5O2" hasOnlySubstanceUnits="true" id="M_bz_c" metaid="ae1c7a8d-8097-40e1-8dac-f56ed8b8c459" name="Benzoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O13P3" hasOnlySubstanceUnits="true" id="M_dgtp_c" metaid="_02b8aea4-dd62-45c1-8ee6-2ed83d65c1a7" name="dGTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O13P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H60O5" hasOnlySubstanceUnits="true" id="M_12dgr140_p" metaid="aba63d0f-24a8-409d-850d-51ff5ed4bb19" name="M_12dgr140_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H60O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H10NO6P" hasOnlySubstanceUnits="true" id="M_pdx5p_c" metaid="_8c22f1f8-8834-4467-9706-e5cf85181be4" name="Pyridoxine_5__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H10NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12N5O8P1X" hasOnlySubstanceUnits="true" id="M_moadamp_c" metaid="_1673f815-08ff-48a9-a6c1-7fce124ac8f8" name="MoaD_Protein_with_bound_AMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12N5O8P1X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5O2" hasOnlySubstanceUnits="true" id="M_bz_p" metaid="_4c50d908-be09-41cc-bd87-d9e77149cd86" name="M_bz_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O7P" hasOnlySubstanceUnits="true" id="M_dimp_c" metaid="_4847f1ea-fbe8-46a0-b954-d777099b14f5" name="dIMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_r1p_c" metaid="c51fe663-a96c-4d5f-b044-fd55cadbf789" name="alpha_D_Ribose_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H42N3O18P2" hasOnlySubstanceUnits="true" id="M_u3hga_XF_c" metaid="_8688a4a6-3274-4c07-b155-4025fa339e4e" name="M_u3hga_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H42N3O18P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O10P2" hasOnlySubstanceUnits="true" id="M_adp_c" metaid="_2c5d4c58-1d75-4ae1-885b-ca295055afa8" name="ADP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O10P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5O2" hasOnlySubstanceUnits="true" id="M_bz_e" metaid="_50d58e18-184f-4feb-a6bb-b7f585abcda2" name="M_bz_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C71H113N2O18P2" hasOnlySubstanceUnits="true" id="M_unagamu_c" metaid="_9d0cf216-7876-451e-a63a-64554bdc32c4" name="M_unagamu_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C71H113N2O18P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10NO2S" hasOnlySubstanceUnits="true" id="M_met_D_e" metaid="_0c467055-569b-4120-a154-eb8045b1652b" name="M_met_D_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10NO2S" hasOnlySubstanceUnits="true" id="M_met_D_c" metaid="_4742ba11-749b-45ba-831f-6756fc3f2680" name="M_met_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H21N2O7PS" hasOnlySubstanceUnits="true" id="M_pan4p_c" metaid="b39ca11a-6517-469c-838a-d90ebfc77437" name="Pantetheine_4__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H21N2O7PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O9P" hasOnlySubstanceUnits="true" id="M_ump_c" metaid="_52592ef6-e980-4115-a0ce-3be62c414f22" name="UMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4N4O" hasOnlySubstanceUnits="true" id="M_hxan_p" metaid="_43301271-49c5-439a-b48c-343af7c883ec" name="Hypoxanthine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4N4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H14NO9P" hasOnlySubstanceUnits="true" id="M_acgam1p_c" metaid="ee099462-057f-40f2-9318-435b77e02ac5" name="N_Acetyl_D_glucosamine_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H14NO9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C84H149N2O39P2" hasOnlySubstanceUnits="true" id="M_kdo2lipid4HL_XF_c" metaid="_5f10e95f-0f73-4cb4-86f8-a423a42e26b4" name="M_kdo2lipid4HL_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C84H149N2O39P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnasecys_c" metaid="_43e9e8dc-27a9-45c7-a846-a9806ffc5900" name="tRNA_SeCys_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H22N2O15P2" hasOnlySubstanceUnits="true" id="M_dtdp4d6dg_c" metaid="c3c4a7d9-e30f-4081-a77a-b0f5247d5e59" name="dTDP_4_dehydro_6_deoxy_D_glucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H22N2O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H39N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ocddec5eACP_c" metaid="c3249e6e-3844-464e-912b-eaffa32b9b2e" name="3_oxo_cis_dodec_5_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H39N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H56O3" hasOnlySubstanceUnits="true" id="M_2hpmhobq_c" metaid="e92b21fa-04e6-4466-8e88-54b6da43b2ec" name="2_Hexaprenyl_3_methyl_6_methoxy_1_4_benzoquinone" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H56O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3" hasOnlySubstanceUnits="true" id="M_gln_L_c" metaid="f4a97e17-4cd4-4c44-a820-68d123b6536e" name="L_Glutamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3" hasOnlySubstanceUnits="true" id="M_gln_L_e" metaid="cb3178e8-82df-4bfc-9bd3-2225d4f2deae" name="L_Glutamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33O2" hasOnlySubstanceUnits="true" id="M_ocdcea_e" metaid="c49ceefe-cbb1-4c1f-b2c9-7d2be26c1725" name="octadecenoate__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H33O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H70O10P1" hasOnlySubstanceUnits="true" id="M_pg161_c" metaid="_30287bb9-8205-4e45-936c-6b7ff079fb61" name="Phosphatidylglycerol__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H70O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33O2" hasOnlySubstanceUnits="true" id="M_ocdcea_c" metaid="_80627c1f-2ab2-4b5e-b9ee-f3bace1053ad" name="M_ocdcea_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H33O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HS2R" hasOnlySubstanceUnits="true" id="M_sufsesh_c" metaid="_8a50d7ae-12e1-458b-bca1-41d50528128f" name="M_sufsesh_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HS2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H41O7P1" hasOnlySubstanceUnits="true" id="M_1odecg3p_c" metaid="bc7afb5b-a544-4ac5-b596-28d4f53b5a73" name="1_octadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H41O7P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O10PS" hasOnlySubstanceUnits="true" id="M_aps_c" metaid="e8f644aa-cf4e-4851-9b52-524f55800b88" name="Adenosine_5__phosphosulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O10PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Cl" hasOnlySubstanceUnits="true" id="M_cl_c" metaid="_460e0853-51f1-4911-9939-66ee68043783" name="Chloride" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cl</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Cu" hasOnlySubstanceUnits="true" id="M_cu2_e" metaid="fa22814a-ff48-4484-925b-60b9d589e426" name="Copper_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cu</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10NO2S" hasOnlySubstanceUnits="true" id="M_met_D_p" metaid="_29bc905d-471c-422d-ac52-fb6b64907c9f" name="M_met_D_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Cu" hasOnlySubstanceUnits="true" id="M_cu2_c" metaid="_7f917db6-f623-4384-ae7d-b478ab60e6e9" name="Copper_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cu</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4N4O" hasOnlySubstanceUnits="true" id="M_hxan_c" metaid="d2e6ca98-7ed8-4c5b-9b61-fdd33de2e076" name="Hypoxanthine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4N4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C33H54N7O17P3S" hasOnlySubstanceUnits="true" id="M_ddcacoa_c" metaid="_108bae10-3aa7-4e54-955e-3f76398c8f5c" name="Dodecanoyl_CoA__n_C12_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C33H54N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H70O10P1" hasOnlySubstanceUnits="true" id="M_pg161_p" metaid="_40f2b6ec-e609-48b0-a490-7f91812458f9" name="Phosphatidylglycerol__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H70O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3" hasOnlySubstanceUnits="true" id="M_gln_L_p" metaid="_11575be7-e27d-4ba4-b151-c5045e19fccd" name="L_Glutamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Cu" hasOnlySubstanceUnits="true" id="M_cu2_p" metaid="_4a0f9fdb-ba9d-4617-b1f5-84637d786267" name="Copper_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cu</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33O2" hasOnlySubstanceUnits="true" id="M_ocdcea_p" metaid="accd4a8b-5987-440e-a077-9adbb463d0ea" name="octadecenoate__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H33O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4N4O" hasOnlySubstanceUnits="true" id="M_hxan_e" metaid="aad41c36-39a2-4627-9de3-54ebb9a099c0" name="Hypoxanthine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4N4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H55N2O8PRS" hasOnlySubstanceUnits="true" id="M_ocdcaACP_c" metaid="a99cb6e9-3d7b-4418-8e12-3e3eadb5e4ac" name="Octadecanoyl_ACP__n_C18_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H55N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H67N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdtdec7eg_c" metaid="cfed38fb-a6aa-4c04-925b-a8ddecbef47f" name="CDP_1_2_ditetradec_7_enoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C40H67N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H4O7P" hasOnlySubstanceUnits="true" id="M_2pg_c" metaid="e70b8811-d6b0-4409-805b-b6cb4cbcc792" name="D_Glycerate_2_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H4O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H22N2O17P2" hasOnlySubstanceUnits="true" id="M_udpgal_c" metaid="ca9477b5-955c-4986-8dda-a59e550e5e7a" name="UDPgalactose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H22N2O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H29N2O10PRS" hasOnlySubstanceUnits="true" id="M_gmeACP_c" metaid="ddead12e-825c-49d7-aabf-988f35133766" name="Glutaryl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H29N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_inost_p" metaid="bdbe4468-697b-4df1-8745-7da05a39e022" name="myo_Inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H81N1O10P1" hasOnlySubstanceUnits="true" id="M_ps180_c" metaid="_8df23e87-1dbe-4a1a-aad2-a2499978d7bb" name="phosphatidylserine__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H81N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2" hasOnlySubstanceUnits="true" id="M_thym_c" metaid="_78dcf97b-b64a-4383-8155-483beeb01f07" name="Thymine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12NO6P" hasOnlySubstanceUnits="true" id="M_3ig3p_c" metaid="_4794eeab-2b3a-4e86-947e-a3668dd50e19" name="C___3_Indolyl__glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H64N7O17P3S" hasOnlySubstanceUnits="true" id="M_odecoa_c" metaid="_09cf7336-e84b-4f05-badd-7be76bcbabe8" name="Octadecenoyl_CoA__n_C18_1CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H64N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16N3O6S" hasOnlySubstanceUnits="true" id="M_gthrd_c" metaid="_6d318b97-a47e-49aa-87cc-3ad6fb676344" name="Reduced_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H16N3O6S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H4O2S10Fe4R" hasOnlySubstanceUnits="true" id="M_sufbcd_4fe4s_c" metaid="ef85ce8a-599c-49c2-b934-52d0e2f16d6c" name="M_sufbcd_4fe4s_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H4O2S10Fe4R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C68H104N12O38" hasOnlySubstanceUnits="true" id="M_murein3p3p_p" metaid="_9933264b-e15a-4ed1-a4f0-f4fc7c227565" name="two_linked_disacharide_tripeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C68H104N12O38</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H31O7P1" hasOnlySubstanceUnits="true" id="M_1tdec7eg3p_c" metaid="ab977643-263a-4a03-a254-bb852121a6e2" name="1_tetradec_7_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H31O7P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2" hasOnlySubstanceUnits="true" id="M_4abut_e" metaid="_83f27303-75f4-4d6e-8ac2-28eeb19db871" name="4_Aminobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO3" hasOnlySubstanceUnits="true" id="M_5aop_c" metaid="a32ed875-f60f-4312-961c-01fc0b55d16b" name="5_Amino_4_oxopentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2" hasOnlySubstanceUnits="true" id="M_thym_p" metaid="b8c96569-55bb-4c39-bfb6-94c7bdf53eda" name="M_thym_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4O1" hasOnlySubstanceUnits="true" id="M_meoh_e" metaid="a3aecd07-6bf3-464b-8ac1-bdd59da7f49e" name="Methanol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH4O1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4O1" hasOnlySubstanceUnits="true" id="M_meoh_c" metaid="_9890bb12-45ac-4f4d-a19a-fc811557ae3c" name="Methanol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH4O1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O3" hasOnlySubstanceUnits="true" id="M_dad_2_c" metaid="_90683926-b866-41fe-80c1-98babccbacf6" name="Deoxyadenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H78O10P1" hasOnlySubstanceUnits="true" id="M_pg181_c" metaid="_8f92af48-2761-440e-9022-9d3fa1cbc681" name="Phosphatidylglycerol__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H78O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2" hasOnlySubstanceUnits="true" id="M_4abut_c" metaid="b71769b5-a14b-48f8-91d0-88bb3d343059" name="4_Aminobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2" hasOnlySubstanceUnits="true" id="M_thym_e" metaid="_7f85071a-6a4f-43db-9823-8a031f2c7d41" name="M_thym_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H33N2O11PRS" hasOnlySubstanceUnits="true" id="M_hpmeACP_c" metaid="_94c28444-1421-443a-aba2-0691b5acec37" name="3_Hydroxypimeloyl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H33N2O11PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C74H112N14O39" hasOnlySubstanceUnits="true" id="M_murein4px4p_p" metaid="eeb327c2-4345-4f36-91b1-60518942ab25" name="two_disacharide_linked_murein_units__tetrapeptide_corsslinked_tetrapeptide__A2pm__D_ala___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C74H112N14O39</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2" hasOnlySubstanceUnits="true" id="M_4abut_p" metaid="_7bbf70a8-f779-47ec-a17e-4c489edf91d3" name="4_Aminobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4O1" hasOnlySubstanceUnits="true" id="M_meoh_p" metaid="d5cde6e6-4478-4de3-a0a9-0fef3954603c" name="Methanol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH4O1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H78O10P1" hasOnlySubstanceUnits="true" id="M_pg181_p" metaid="_12290258-af5c-47c1-979d-c45053f67323" name="Phosphatidylglycerol__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H78O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H37N2O8PRS" hasOnlySubstanceUnits="true" id="M_tdec2eACP_c" metaid="b40796b5-d9da-41e2-8108-7ab4fac80089" name="trans_Dec_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H37N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C47H72O2" hasOnlySubstanceUnits="true" id="M_2omph_c" metaid="_50c8fd8a-0b8d-4b9d-9f3f-7e73939896c7" name="2_Octaprenyl_6_methoxyphenol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C47H72O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H33N7O13P2S" hasOnlySubstanceUnits="true" id="M_dpcoa_c" metaid="_2114affe-c062-4904-a403-daf62352e50a" name="Dephospho_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H33N7O13P2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="K" hasOnlySubstanceUnits="true" id="M_k_p" metaid="_215c8043-9dff-438d-a258-cec5f2bc47ac" name="potassium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: K</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5NO4" hasOnlySubstanceUnits="true" id="M_23dhdp_c" metaid="_752884b5-3ccf-4ce5-b928-ef740b225ab0" name="2_3_Dihydrodipicolinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_lcts_p" metaid="f961f514-f854-4ab7-a243-2b378a11a89f" name="M_lcts_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H22O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H15N5O3S" hasOnlySubstanceUnits="true" id="M_5mta_c" metaid="cbac2a4e-49f7-48a8-9add-029ce811ba89" name="5_Methylthioadenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H15N5O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H77O13P2" hasOnlySubstanceUnits="true" id="M_pgp181_c" metaid="_5f9ad7b0-8d3c-43cf-8a33-90e1eb710e57" name="Phosphatidylglycerophosphate__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H77O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H16N4O7P2S" hasOnlySubstanceUnits="true" id="M_thmpp_c" metaid="_30903d62-892f-48e3-a1c0-6b6a72280043" name="Thiamine_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H16N4O7P2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O7P" hasOnlySubstanceUnits="true" id="M_amp_c" metaid="_4fe6c29c-fecf-470c-be2a-a9bcf8656833" name="AMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H60O5" hasOnlySubstanceUnits="true" id="M_12dgr140_c" metaid="_7e1e6be4-b6d5-4044-b0b9-2f04b2bea97a" name="1_2_Diacyl_sn_glycerol__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H60O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2R" hasOnlySubstanceUnits="true" id="M_sertrna_c" metaid="_81f93249-c898-454e-98bd-866ce601f5ba" name="L_Seryl_tRNA_Ser_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H33N9O15P2" hasOnlySubstanceUnits="true" id="M_fadh2_c" metaid="_4041656b-e412-49f4-b816-7600ed0651ee" name="Flavin_adenine_dinucleotide_reduced" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H33N9O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_lcts_c" metaid="_37a5c5d2-2f41-4400-b1e7-bcba04bb38d5" name="M_lcts_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H22O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N5O13P3" hasOnlySubstanceUnits="true" id="M_ahdt_c" metaid="_5035af71-197d-41f9-aa74-443f3358baaf" name="2_Amino_4_hydroxy_6__erythro_1_2_3_trihydroxypropyl_dihydropteridine_triphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N5O13P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O14P3" hasOnlySubstanceUnits="true" id="M_dutp_c" metaid="_80fe83ce-be12-4f96-a6f6-a17511a22de4" name="dUTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H37N2O9PRS" hasOnlySubstanceUnits="true" id="M_3odecACP_c" metaid="a34c0d26-e907-4875-baf3-7229d06e1f16" name="3_Oxodecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H37N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO8P" hasOnlySubstanceUnits="true" id="M_gam6p_c" metaid="f0da3ccb-33da-4fb1-ac90-d48b92df0746" name="D_Glucosamine_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H77O13P2" hasOnlySubstanceUnits="true" id="M_pgp181_p" metaid="af1769b8-8aed-4c2c-a532-e2aab8ffd559" name="Phosphatidylglycerophosphate__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H77O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H21N5O15P2" hasOnlySubstanceUnits="true" id="M_prfp_c" metaid="fa867997-62a0-40f2-99a3-cf71a1fa8319" name="1__5_Phosphoribosyl__5___5_phosphoribosylamino_methylideneamino_imidazole_4_carboxamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H21N5O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O4" hasOnlySubstanceUnits="true" id="M_succ_c" metaid="_474e6990-28d1-4ec8-9f01-356e9e7060cd" name="Succinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO8P" hasOnlySubstanceUnits="true" id="M_g3ps_p" metaid="_4f51406a-ef1b-4d16-9d37-94c2adea606c" name="Glycerophosphoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O4" hasOnlySubstanceUnits="true" id="M_succ_p" metaid="_37f6347d-7051-42e9-a560-40c4bf52c173" name="Succinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_gal_p" metaid="fa6238b5-6319-4f16-8851-65f593e11a36" name="D_Galactose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16N3O6S" hasOnlySubstanceUnits="true" id="M_gthrd_e" metaid="f6eae696-19ab-4dd8-af09-37528a564931" name="Reduced_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H16N3O6S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16N3O6S" hasOnlySubstanceUnits="true" id="M_gthrd_p" metaid="a9635167-b7c7-4115-a2fa-95aa4914a33b" name="Reduced_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H16N3O6S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C63H116N2O29P2" hasOnlySubstanceUnits="true" id="M_hlipidA_XF_c" metaid="cde26a11-d4db-4032-a434-28c5ec93113f" name="M_hlipidA_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C63H116N2O29P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H50N7O17P3S" hasOnlySubstanceUnits="true" id="M_dcacoa_c" metaid="_793f8d72-7a4d-47d7-98e2-bcbb112cd0b2" name="Decanoyl_CoA__n_C10_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H50N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_gal_c" metaid="_9ba9d16d-988a-4711-970f-57a94cce6ea5" name="D_Galactose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_gal_e" metaid="_52e47f01-5ef5-4afe-bfda-be27bfeca562" name="D_Galactose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="K" hasOnlySubstanceUnits="true" id="M_k_c" metaid="_232f0d8c-8b0a-4749-a7ca-5d12734bd206" name="potassium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: K</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H5O3" hasOnlySubstanceUnits="true" id="M_2obut_c" metaid="ee189109-cd3b-4543-81a6-b72eefb96c9d" name="2_Oxobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO8P" hasOnlySubstanceUnits="true" id="M_g3ps_c" metaid="_40067cd7-167d-4fba-a233-0883aa18794d" name="Glycerophosphoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H5N3O" hasOnlySubstanceUnits="true" id="M_csn_c" metaid="_0a157836-f6dd-476a-b4fb-6fe5231d5451" name="Cytosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H5N3O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="K" hasOnlySubstanceUnits="true" id="M_k_e" metaid="_806bd4c5-c3bb-413a-bf66-963a22bfb2f4" name="potassium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: K</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO8P" hasOnlySubstanceUnits="true" id="M_g3ps_e" metaid="_9df4095e-2177-43b9-b941-0114c6f850c6" name="Glycerophosphoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O7P2" hasOnlySubstanceUnits="true" id="M_ipdp_c" metaid="_57069a2f-f263-4d87-b32a-03f2a90a3ce3" name="Isopentenyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H23N2O8PRS" hasOnlySubstanceUnits="true" id="M_acACP_c" metaid="_7a08b1a3-ec7b-4b70-acd9-8907b1ab9e9f" name="Acetyl_ACP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C13H23N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C111H167N21O58" hasOnlySubstanceUnits="true" id="M_murein4px4px4p_p" metaid="_7034283c-795d-4c7c-8dd9-c73ebfa3af89" name="three_disacharide_linked_murein_units__tetrapeptide_crosslinked_tetrapeptide__A2pm__D_ala____tetrapeptide_corsslinked_tetrapeptide__A2pm__D_ala____middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C111H167N21O58</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C49H54FeN4O6" hasOnlySubstanceUnits="true" id="M_hemeA_1_c" metaid="_8dafc607-8c60-4144-bb61-e69d7933af41" name="M_hemeA_1_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C49H54FeN4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3" hasOnlySubstanceUnits="true" id="M_glyald_c" metaid="_99315983-b783-4d15-a64c-bb7c50508372" name="D_Glyceraldehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O5" hasOnlySubstanceUnits="true" id="M_mal_D_e" metaid="_3f836984-888d-442d-a80d-124ea9653d5e" name="M_mal_D_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3" hasOnlySubstanceUnits="true" id="M_glyald_e" metaid="_52131b8a-027f-4a1b-b1dc-4307a0d9d7c4" name="M_glyald_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="HCO3" hasOnlySubstanceUnits="true" id="M_hco3_p" metaid="_73857529-3fa7-459d-b32c-74dc47eeba72" name="M_hco3_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HCO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O5" hasOnlySubstanceUnits="true" id="M_mal_D_p" metaid="b66491f9-b558-456f-84fe-f45205b1a417" name="M_mal_D_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16N3O6SSe" hasOnlySubstanceUnits="true" id="M_gslnt_c" metaid="f5b6bdf7-9148-4ce7-bd50-24127c890289" name="M_gslnt_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H16N3O6SSe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5N5O" hasOnlySubstanceUnits="true" id="M_preq0_c" metaid="b309cee8-6e97-4114-96bd-93c5d0ba25cb" name="7_cyano_7_carbaguanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5N5O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O5" hasOnlySubstanceUnits="true" id="M_mal_D_c" metaid="_458861eb-3197-4592-90fe-ca6bd9aa0f88" name="M_mal_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O9P" hasOnlySubstanceUnits="true" id="M_6pgl_c" metaid="ee88dbde-4073-4637-b00b-0767b52d584b" name="6_phospho_D_glucono_1_5_lactone" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H3O6" hasOnlySubstanceUnits="true" id="M_acon_C_c" metaid="_983551f4-31f2-4080-ae0b-846e98ef4a74" name="cis_Aconitate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H3O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_R_L_c" metaid="ed0f82b6-0a1a-4986-a913-e2835731af7d" name="L_methionine_R_sulfoxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8N2O2R" hasOnlySubstanceUnits="true" id="M_asntrna_c" metaid="ee82cb7d-b294-4e8f-bcbd-9d89b010173f" name="L_Asparaginyl_tRNA_Asn_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H8N2O2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_R_L_e" metaid="d6df6cfa-f5fd-4e6a-bb9f-54c0f495e3fd" name="M_metsox_R_L_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H18N4O6" hasOnlySubstanceUnits="true" id="M_dmlz_c" metaid="cb34b92e-e342-4791-b821-d9e212d8605d" name="6_7_Dimethyl_8__1_D_ribityl_lumazine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C13H18N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Zn" hasOnlySubstanceUnits="true" id="M_zn2_e" metaid="_4a556ba2-0ee3-43e7-a4f8-7546de1ffafa" name="Zinc" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Zn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H7O4" hasOnlySubstanceUnits="true" id="M_34hpp_c" metaid="c9300efc-7e75-456f-b6a3-aea4c65b139d" name="3__4_Hydroxyphenyl_pyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H7O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="RCu11" hasOnlySubstanceUnits="true" id="M_11cu2s_CopA_p" metaid="_997bc6c2-f19f-44e1-b525-322eb1f375bb" name="Protein_CopA_bounded_to_11_atoms_of_copper" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: RCu11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Zn" hasOnlySubstanceUnits="true" id="M_zn2_c" metaid="_1fb155a7-e27d-4f0f-8fb7-10e208dcab56" name="Zinc" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Zn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H12NO6" hasOnlySubstanceUnits="true" id="M_suchms_c" metaid="_3f394db0-1c6a-4775-9589-e5b9a86fe816" name="M_suchms_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H12NO6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Zn" hasOnlySubstanceUnits="true" id="M_zn2_p" metaid="_3f542a6b-e6f5-429b-a313-c9d62a9fe0c9" name="Zinc" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Zn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H7N2O5P" hasOnlySubstanceUnits="true" id="M_imacp_c" metaid="aabf93be-f89c-4836-a9ec-ea62f62bbbc9" name="3__Imidazol_4_yl__2_oxopropyl_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H7N2O5P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" hasOnlySubstanceUnits="true" id="M_na1_e" metaid="_83d73a25-8317-4dca-910b-370f23535b9c" name="Sodium" sboTerm="SBO:0000240"/> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7N4O4" hasOnlySubstanceUnits="true" id="M_alltt_c" metaid="eee9822b-fa76-413e-9f94-233797c284c6" name="Allantoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="true" id="M_na1_c" metaid="_4c0b1829-431b-453e-a0be-2f3caf81bfe3" name="Sodium" sboTerm="SBO:0000240"/> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13O8" hasOnlySubstanceUnits="true" id="M_kdo_c" metaid="_83255d96-44c0-4eac-9047-d321d1883508" name="3_Deoxy_D_manno_2_octulosonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H13O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO4" hasOnlySubstanceUnits="true" id="M_4hthr_c" metaid="_2f970658-3405-49d2-827e-cda31ac3c580" name="M_4hthr_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H37O7P" hasOnlySubstanceUnits="true" id="M_1hdecg3p_c" metaid="e94be5d7-f496-4f2a-8593-3bcfc9c2d1ce" name="1_hexadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H37O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" hasOnlySubstanceUnits="true" id="M_na1_p" metaid="_67530b6e-a8f1-458c-b939-90f3fc424138" name="Sodium" sboTerm="SBO:0000240"/> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H41N2O8PRS" hasOnlySubstanceUnits="true" id="M_cddec5eACP_c" metaid="_7d9bf15a-c064-4218-a701-d71b4206b45f" name="cis_dodec_5_enoyl__acyl_carrier_protein___n_C12_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H41N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H15NO8P" hasOnlySubstanceUnits="true" id="M_4ppan_c" metaid="_32fb951f-9d39-48a0-bf99-b42cd73fcf37" name="D_4__Phosphopantothenate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H15NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H18N2O16P2" hasOnlySubstanceUnits="true" id="M_udp4kp_c" metaid="_267c7469-631b-4806-b114-f73873b2ca8f" name="UDP_4_keto_pentose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H18N2O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12NO8" hasOnlySubstanceUnits="true" id="M_sl2a6o_c" metaid="c53714e9-99bf-443b-a309-9745c89bcdac" name="N_Succinyl_2_L_amino_6_oxoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12NO8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O7P" hasOnlySubstanceUnits="true" id="M_dgmp_c" metaid="_88eff2be-703f-4c42-9026-2053283954d6" name="dGMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_R_L_p" metaid="_1a7ecca6-839c-43db-a508-6bb4abbdeec9" name="M_metsox_R_L_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H76O5" hasOnlySubstanceUnits="true" id="M_12dgr180_c" metaid="_912e1495-951c-4316-88ef-1f633ce29a60" name="1_2_Diacyl_sn_glycerol__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H76O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H16N4O6" hasOnlySubstanceUnits="true" id="M_4r5au_c" metaid="f669c91e-8061-44ca-aa0c-0aa962f5d915" name="4__1_D_Ribitylamino__5_aminouracil" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H16N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NOR" hasOnlySubstanceUnits="true" id="M_iletrna_c" metaid="_6b19678e-6701-474f-9abc-29755a992a42" name="L_Isoleucyl_tRNA_Ile_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H35N7O19P3S" hasOnlySubstanceUnits="true" id="M_succoa_c" metaid="_09209ea9-8108-4d26-8459-40fe64cf3fb6" name="Succinyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H35N7O19P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H76O5" hasOnlySubstanceUnits="true" id="M_12dgr180_p" metaid="_00a128f5-2674-4f2d-8a4c-aeb6c8a5bc36" name="M_12dgr180_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H76O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_inost_e" metaid="_75ad0a0a-5032-4e7e-bb14-0333fceb16a6" name="myo_Inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H24N10O22P5" hasOnlySubstanceUnits="true" id="M_ap5a_c" metaid="_84f0382a-a19e-4f6c-9e95-ad5376ac7502" name="P1_P5_Bis_5__adenosyl__pentaphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H24N10O22P5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_inost_c" metaid="de6efc63-7434-4c4c-ae58-746a80de0478" name="myo_Inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H43N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hddecACP_c" metaid="_80a29bd8-d2b9-471b-bb2b-956596ab1831" name="R__3_Hydroxydodecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H43N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H24N7O6" hasOnlySubstanceUnits="true" id="M_5mthf_c" metaid="d2df0672-3e3e-4352-aada-dde3e5ab2c86" name="5_Methyltetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H24N7O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3" hasOnlySubstanceUnits="true" id="M_glyald_p" metaid="_61ea2ba8-0f32-4126-96e8-4b79cae44de2" name="M_glyald_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HCO3" hasOnlySubstanceUnits="true" id="M_hco3_c" metaid="f323515f-6b4d-4f7b-9856-3eefd33b670e" name="Bicarbonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HCO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O8P" hasOnlySubstanceUnits="true" id="M_gar_c" metaid="fd54baee-ee54-4189-b660-6d95f5456c1b" name="N1__5_Phospho_D_ribosyl_glycinamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="HCO3" hasOnlySubstanceUnits="true" id="M_hco3_e" metaid="_61d939b1-ed1f-43ce-9e03-a4c08e8bc887" name="M_hco3_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HCO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H27N2O9PRS" hasOnlySubstanceUnits="true" id="M_3haACP_c" metaid="_033de923-3d72-446f-8bf6-1ceeaf457028" name="3R__3_Hydroxyacyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H27N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3" hasOnlySubstanceUnits="true" id="M_dha_c" metaid="a0bfad08-cbfb-4f6d-806f-0f4ff1765afa" name="M_dha_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12O6" hasOnlySubstanceUnits="true" id="M_quin_e" metaid="bd99a476-4b2e-4522-a3e4-6f25d1489e01" name="M_quin_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4" hasOnlySubstanceUnits="true" id="M_adn_p" metaid="_7d39ad76-0d65-4592-89a3-0c21f052f029" name="Adenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4N2O" hasOnlySubstanceUnits="true" id="M_urea_c" metaid="_77223863-1562-4b4d-8f6e-dd771c950861" name="Urea" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH4N2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H21N2O2" hasOnlySubstanceUnits="true" id="M_dann_c" metaid="_2352f11e-ba6f-4ddd-a073-d343b40a6112" name="7_8_Diaminononanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H21N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3" hasOnlySubstanceUnits="true" id="M_ser_D_c" metaid="aeb53456-a522-4845-a201-588cd0c2e42a" name="D_Serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C44H75N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdhdec9eg_c" metaid="_43d30dbe-5f11-4ef3-953f-e8f9ea4f67b2" name="CDP_1_2_dihexadec_9_enoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C44H75N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12O6" hasOnlySubstanceUnits="true" id="M_quin_p" metaid="_8fc5fa9f-9288-4b97-99a7-dff2a6505342" name="M_quin_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H16N2O7" hasOnlySubstanceUnits="true" id="M_sl26da_c" metaid="_41ef3c64-c064-4cd4-92ed-418079560801" name="N_Succinyl_LL_2_6_diaminoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H16N2O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O3S" hasOnlySubstanceUnits="true" id="M_dhmtp_c" metaid="ac881e6e-fec6-4756-b044-e561c508a25e" name="M_dhmtp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H68O5" hasOnlySubstanceUnits="true" id="M_12dgr160_c" metaid="_0afbc90f-9b1c-452c-8ad7-a4429280ce87" name="1_2_Diacyl_sn_glycerol__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H68O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_S_L_c" metaid="_16643f8f-c679-4729-9aa3-9f1f5f62564f" name="L_Methionine_Sulfoxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O4" hasOnlySubstanceUnits="true" id="M_23dhmp_c" metaid="c4a26a7f-7396-4c9b-b382-953bea50f73f" name="R__2_3_Dihydroxy_3_methylpentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_S_L_e" metaid="_49986ea5-6b53-4473-b693-50ce26c6e9e8" name="M_metsox_S_L_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4N2O" hasOnlySubstanceUnits="true" id="M_urea_p" metaid="_43c3bda0-062b-47b6-a12b-f30f608bbe0d" name="Urea" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH4N2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H55O8P1" hasOnlySubstanceUnits="true" id="M_pa141_c" metaid="c188f9da-a9ab-4218-9ddf-0a1bf83e6f7c" name="1_2_ditetradec_7_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H55O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO3R" hasOnlySubstanceUnits="true" id="M_asptrna_c" metaid="_1bc00e1f-f2fd-4a62-9bba-e097ba867cb0" name="L_Aspartyl_tRNA_Asp_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6NO3R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H7O3" hasOnlySubstanceUnits="true" id="M_3mob_c" metaid="_026bee60-b896-4ae9-ac99-18069021688d" name="3_Methyl_2_oxobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H7O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N5O7P" hasOnlySubstanceUnits="true" id="M_dhpmp_c" metaid="f228857b-3f2f-4b3f-83ca-0044dd00329f" name="M_dhpmp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N5O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H25N5O16P2" hasOnlySubstanceUnits="true" id="M_adphep_LD_c" metaid="_043aff48-157c-40a7-820d-8b79c5d4c269" name="ADP_L_glycero_D_manno_heptose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H25N5O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H27O2" hasOnlySubstanceUnits="true" id="M_ttdca_c" metaid="_8193484f-1f9f-4cde-8c77-a264ef32b72c" name="tetradecanoate__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H27O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_xylu_L_c" metaid="_9ea7f04a-68b4-4f04-b027-8a9a1d987e35" name="M_xylu_L_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H27O2" hasOnlySubstanceUnits="true" id="M_ttdca_e" metaid="_85bf543c-dbf3-40b8-aec0-f8867d1a9759" name="tetradecanoate__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H27O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H55O8P1" hasOnlySubstanceUnits="true" id="M_pa141_p" metaid="f110f5d8-f27b-4fb9-86de-ac4db73ccf6d" name="1_2_ditetradec_7_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H55O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H62N7O17P3S" hasOnlySubstanceUnits="true" id="M_pmtcoa_c" metaid="a2492e1d-7658-447e-bc3f-6f124b6498ca" name="Palmitoyl_CoA__n_C16_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H62N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H39N2O8PRS" hasOnlySubstanceUnits="true" id="M_dcaACP_c" metaid="_39d6026b-bd6c-43e1-819e-3e37a4d38279" name="Decanoyl_ACP__n_C10_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H39N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4" hasOnlySubstanceUnits="true" id="M_adn_e" metaid="_06681255-ca55-4d6e-a318-5146048fe430" name="Adenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H45N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hcmrs7eACP_c" metaid="_991b9738-33dd-4908-9225-f410485a340b" name="R__3_hydroxy_cis_myristol_7_eoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H45N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O4" hasOnlySubstanceUnits="true" id="M_2dhp_c" metaid="_35e85121-8948-4271-b5da-3a8ee3131c50" name="2_Dehydropantoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4" hasOnlySubstanceUnits="true" id="M_adn_c" metaid="_7ee4933b-44b9-4ef3-b32f-6eb2879a4af8" name="Adenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12O6" hasOnlySubstanceUnits="true" id="M_quin_c" metaid="_0f6f353d-ba4b-494d-90c0-1ed3ad6ee4e1" name="M_quin_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H6O" hasOnlySubstanceUnits="true" id="M_etoh_c" metaid="e47016c7-19a2-4935-ab82-c5eb220b89d0" name="Ethanol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H6O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2" hasOnlySubstanceUnits="true" id="M_val_L_p" metaid="d9887695-6657-4c5f-bb99-08f7125c9e82" name="L_Valine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C46H70O" hasOnlySubstanceUnits="true" id="M_2oph_c" metaid="d49cb102-3bd8-47e0-bf24-9cfa84e5179e" name="2_Octaprenylphenol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C46H70O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2" hasOnlySubstanceUnits="true" id="M_val_L_c" metaid="e438fed2-aa4e-4393-abde-490c77c49a61" name="L_Valine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3O" hasOnlySubstanceUnits="true" id="M_4ahmmp_c" metaid="ce138066-f4d6-4c15-9b02-8caddd0dff9e" name="4_Amino_5_hydroxymethyl_2_methylpyrimidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N3O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2" hasOnlySubstanceUnits="true" id="M_val_L_e" metaid="_46ca55d5-b6be-4c78-9219-c02c32c4dc16" name="L_Valine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_fuc_L_e" metaid="e73d084e-64bf-40b1-b7b4-945299e2f7c9" name="M_fuc_L_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H26N7O14P2" hasOnlySubstanceUnits="true" id="M_nad_c" metaid="bb1b199e-2969-485a-a88c-1ec5f0179d20" name="Nicotinamide_adenine_dinucleotide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H26N7O14P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_fuc_L_c" metaid="_355a215d-4db8-4832-8fb8-ca1ab01f0eda" name="M_fuc_L_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="AsO3" hasOnlySubstanceUnits="true" id="M_aso3_c" metaid="_5453d5d0-a66b-49bb-b42a-eabca45bc40c" name="Arsenite" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: AsO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8O9P" hasOnlySubstanceUnits="true" id="M_2ddg6p_c" metaid="_114fd6c5-31ba-4155-b85e-21f7a01dd1c9" name="M_2ddg6p_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C77H119N15O41" hasOnlySubstanceUnits="true" id="M_murein5p4p_p" metaid="_9dc1160f-ee56-4e10-a93c-c065af2fb172" name="two_linked_disacharide_pentapeptide_and_tetrapeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C77H119N15O41</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H27O2" hasOnlySubstanceUnits="true" id="M_ttdca_p" metaid="f632defc-455c-460e-8b73-ffab54254999" name="tetradecanoate__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H27O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O7" hasOnlySubstanceUnits="true" id="M_5dglcn_c" metaid="d17cd973-347c-4f92-808f-f3db2829a900" name="5_Dehydro_D_gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C81H156O17P2" hasOnlySubstanceUnits="true" id="M_clpn180_p" metaid="_070e315e-74cc-433c-867e-b5840ddb5f12" name="cardiolipin__tetraoctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C81H156O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H10O5" hasOnlySubstanceUnits="true" id="M_3c2hmp_c" metaid="_177a430c-8868-472c-893e-1beb2488d67f" name="3_Carboxy_2_hydroxy_4_methylpentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H22N3O15P2" hasOnlySubstanceUnits="true" id="M_udpLa4n_c" metaid="ce336872-4e86-448f-8eff-547a30ec3470" name="M_udpLa4n_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H22N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_S_L_p" metaid="fa47220e-2432-42c1-9b38-149e2ebb40e0" name="M_metsox_S_L_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H68O5" hasOnlySubstanceUnits="true" id="M_12dgr160_p" metaid="e162bccf-b25d-40c0-b12e-e97ff2edd2ff" name="M_12dgr160_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H68O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H53NO12P" hasOnlySubstanceUnits="true" id="M_lipidX_XF_c" metaid="b1c41bb2-0646-4bcc-9e04-a1133485d7d4" name="M_lipidX_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C28H53NO12P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H36N2O11" hasOnlySubstanceUnits="true" id="M_novbcn_e" metaid="_47801743-fdfb-408d-a8a7-9787d1283699" name="novobiocin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H36N2O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N3O9P" hasOnlySubstanceUnits="true" id="M_5caiz_c" metaid="_6c9e98ef-7d1e-44ce-b4a9-42c3263c2ab8" name="5_phosphoribosyl_5_carboxyaminoimidazole" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N3O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H6O" hasOnlySubstanceUnits="true" id="M_etoh_p" metaid="_83b31a68-c565-4434-910e-c0c6359fff49" name="M_etoh_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H6O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H49N2O8PRS" hasOnlySubstanceUnits="true" id="M_tpalm2eACP_c" metaid="_22e5a1e3-e9c3-4ff0-90da-9ab71904dc41" name="trans_Hexadec_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H49N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8N2O4" hasOnlySubstanceUnits="true" id="M_forglu_c" metaid="e0b032b0-6ff3-46ef-b5ab-71288f24bc8d" name="N_Formimidoyl_L_glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12N2O3" hasOnlySubstanceUnits="true" id="M_progly_c" metaid="_691ebdf0-21c6-4598-a1ad-36baaae52159" name="M_progly_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H12N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H22N3O18P2" hasOnlySubstanceUnits="true" id="M_uacmamu_c" metaid="a6428724-467c-4601-8651-14050b290d18" name="UDP_N_acetyl_D_mannosaminouronate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H22N3O18P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO7P" hasOnlySubstanceUnits="true" id="M_pram_c" metaid="_85c62393-413d-4893-8c01-3c328c75978f" name="5_Phospho_beta_D_ribosylamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H43N3O19P2" hasOnlySubstanceUnits="true" id="M_u3aga_XF_c" metaid="bdcddf87-891e-48b4-ada6-61140f93ac48" name="M_u3aga_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H43N3O19P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H36N2O11" hasOnlySubstanceUnits="true" id="M_novbcn_p" metaid="_352b1076-1234-4942-9297-1cd9f37bc16d" name="novobiocin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H36N2O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H14N4O4S2R4" hasOnlySubstanceUnits="true" id="M_trdrd_c" metaid="c0f2e38a-aeaf-4c60-9faa-7d994d090104" name="Reduced_thioredoxin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H14N4O4S2R4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3OR" hasOnlySubstanceUnits="true" id="M_histrna_c" metaid="_46576463-2ab2-47d6-bc19-ece0396b696e" name="L_Histidyl_tRNA_His_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N3OR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H24N2O15P2" hasOnlySubstanceUnits="true" id="M_dtdprmn_c" metaid="_7248c5f2-5536-4fa6-8885-a1f09fd313f4" name="dTDP_L_rhamnose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H24N2O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO2" hasOnlySubstanceUnits="true" id="M_pro_L_e" metaid="e5935128-9d10-4545-bc60-df7762d32050" name="L_Proline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO2" hasOnlySubstanceUnits="true" id="M_pro_L_c" metaid="_60cffd2a-0723-46c3-b847-76149ed8ba06" name="L_Proline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O6" hasOnlySubstanceUnits="true" id="M_2ddglcn_c" metaid="_0c68e62b-a2ad-4ab3-a62d-59eea5cf7389" name="2_Dehydro_3_deoxy_D_gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H71N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdtdecg_c" metaid="d172f13d-c895-4c2c-b6e8-bbe229008d13" name="CDP_1_2_ditetradecanoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C40H71N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N5O17P4" hasOnlySubstanceUnits="true" id="M_ppgpp_c" metaid="fbbed2b2-bc7f-463e-8a61-dedfb2f17969" name="Guanosine_3__5__bis_diphosphate_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N5O17P4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N3O5" hasOnlySubstanceUnits="true" id="M_cytd_c" metaid="d7071268-659c-44cc-9d26-6f94bc593872" name="Cytidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N3O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_ara5p_c" metaid="e94b938e-eac2-49a5-b775-b6b2ada4953a" name="D_Arabinose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O10P2" hasOnlySubstanceUnits="true" id="M_dgdp_c" metaid="f40b6e12-896e-42da-ad86-290ed78876b0" name="dGDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O10P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="R" hasOnlySubstanceUnits="true" id="M_etfox_c" metaid="_1d6c03df-9b36-4f17-99aa-1b3c105d8f19" name="Electron_transfer_flavoprotein_oxidized" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H35N2O8PRS" hasOnlySubstanceUnits="true" id="M_ocACP_c" metaid="a12506fc-a8d8-4489-83e9-6eca6690bad8" name="Octanoyl_ACP__n_C8_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H35N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO2" hasOnlySubstanceUnits="true" id="M_pro_L_p" metaid="_3aa4181e-df32-468a-996f-8ee889f22e76" name="L_Proline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H14N5O11P" hasOnlySubstanceUnits="true" id="M_dcamp_c" metaid="_3e36d473-0360-46f6-bea3-6e69921f5b5d" name="N6__1_2_Dicarboxyethyl__AMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H14N5O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H8O6" hasOnlySubstanceUnits="true" id="M_chor_c" metaid="_861501cd-bfaf-4379-af20-55f06b55f048" name="chorismate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H8O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H17NO11P" hasOnlySubstanceUnits="true" id="M_acmum6p_c" metaid="a7f2ca1c-7335-40a7-a4c9-40213dffd6c9" name="N_acetylmuramate_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H17NO11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H5O3" hasOnlySubstanceUnits="true" id="M_sucsal_c" metaid="_5bb109ef-224e-4128-9d2a-82069c112e24" name="Succinic_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12N2O3" hasOnlySubstanceUnits="true" id="M_alaala_p" metaid="_2b110650-1ab5-4691-97e0-2452fdb6ee7f" name="D_Alanyl_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N5O4" hasOnlySubstanceUnits="true" id="M_dhmpt_c" metaid="_9d286888-17b3-45e3-8d35-29df68cb72e1" name="M_dhmpt_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="P2HO7" hasOnlySubstanceUnits="true" id="M_ppi_c" metaid="_86a426b1-c2d9-4c3c-93bc-3c02dc0df33f" name="Diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: P2HO7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3" hasOnlySubstanceUnits="true" id="M_asn_L_c" metaid="b6b0aa02-7dd9-4612-be46-f310627219fa" name="L_Asparagine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H8N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H10O10P" hasOnlySubstanceUnits="true" id="M_2dda7p_c" metaid="_3886d780-2882-46ea-a946-49d3ccb7923c" name="2_Dehydro_3_deoxy_D_arabino_heptonate_7_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H10O10P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H16N4" hasOnlySubstanceUnits="true" id="M_agm_p" metaid="_441bd501-469e-41d8-b5ad-a13ace02d988" name="M_agm_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H16N4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Co" hasOnlySubstanceUnits="true" id="M_cobalt2_c" metaid="_21744346-1c03-4851-8278-ffdcbdc40d47" name="Cobalt_Co2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Co</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H33O7P" hasOnlySubstanceUnits="true" id="M_1tdecg3p_c" metaid="_3b77a3b0-f42e-4935-b884-401ffdffec0a" name="1_tetradecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H33O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Co" hasOnlySubstanceUnits="true" id="M_cobalt2_e" metaid="f70b5bb1-2240-48c1-a529-dd502abf1328" name="Cobalt_Co2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Co</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12N2O3" hasOnlySubstanceUnits="true" id="M_alaala_c" metaid="_9f439b98-142d-4805-8d78-4ff57bfc2251" name="D_Alanyl_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Co" hasOnlySubstanceUnits="true" id="M_cobalt2_p" metaid="_374b1ce7-42eb-4fc3-a848-cd0b91f8727f" name="Cobalt_Co2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Co</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H51N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hpalmACP_c" metaid="_591f9614-19ff-4312-b06f-e9a075408c77" name="R_3_hydroxypalmitoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H51N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C36H40N4O8" hasOnlySubstanceUnits="true" id="M_cpppg3_c" metaid="a0e3b7c5-adee-4995-8dcd-0f8e09571690" name="Coproporphyrinogen_III" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C36H40N4O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N4O9P" hasOnlySubstanceUnits="true" id="M_5apru_c" metaid="_88bc271c-57ea-4ef6-b7fa-972715ec43f4" name="5_Amino_6__5__phosphoribosylamino_uracil" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H27N2O8PRS" hasOnlySubstanceUnits="true" id="M_butACP_c" metaid="_17ce6730-5fbe-4b03-91a1-82b6ca8b65d1" name="Butyryl_ACP__n_C4_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H27N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7O2" hasOnlySubstanceUnits="true" id="M_pac_c" metaid="d0773256-1447-4dbc-aaf0-41ad8a833922" name="Phenylacetic_acid" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H7O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H8O6" hasOnlySubstanceUnits="true" id="M_pphn_c" metaid="eac503bd-6aef-46b3-9533-9b26f1f8c190" name="Prephenate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H8O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaile_c" metaid="e4d6442b-ae1e-436b-8f82-0baeedc19d5d" name="tRNA_Ile_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C48H87N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdodecg_c" metaid="_81e152a5-a783-4702-8f88-e73bf5766026" name="CDP_1_2_dioctadecanoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C48H87N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5NO3" hasOnlySubstanceUnits="true" id="M_2amsa_c" metaid="_207bcba1-43b4-459f-a665-42b837a9ff00" name="2_Aminomalonate_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O2" hasOnlySubstanceUnits="true" id="M_h2o2_p" metaid="_42b77eb6-d10c-45a7-ac8c-1518b2ee7787" name="Hydrogen_peroxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2S" hasOnlySubstanceUnits="true" id="M_met_L_e" metaid="_26554b8f-fc5f-42e3-a5a2-22d5acae17b6" name="L_Methionine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2S" hasOnlySubstanceUnits="true" id="M_met_L_c" metaid="a5c2ad58-768a-4217-812c-eb0b377dc6d2" name="L_Methionine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H17NO3" hasOnlySubstanceUnits="true" id="M_8aonn_c" metaid="_5e5dd73e-e9b3-4ad5-97e3-36dbba07eac7" name="8_Amino_7_oxononanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H17NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H60N7O17P3S" hasOnlySubstanceUnits="true" id="M_hdcoa_c" metaid="ab7c9567-6b41-46ec-8ca0-9208c5931875" name="Hexadecenoyl_CoA__n_C16_1CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H60N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O2" hasOnlySubstanceUnits="true" id="M_h2o2_e" metaid="_5cddf336-5581-454d-a420-15eb05f6f669" name="Hydrogen_peroxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9N5O2" hasOnlySubstanceUnits="true" id="M_6hmhpt_c" metaid="_099a49ea-bc36-4aa8-8ea5-7a5fc7abdd76" name="6_hydroxymethyl_dihydropterin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H9N5O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O2" hasOnlySubstanceUnits="true" id="M_h2o2_c" metaid="d3edff3f-0965-4524-988e-e012dd269a53" name="Hydrogen_peroxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H16N4" hasOnlySubstanceUnits="true" id="M_agm_c" metaid="e5d12b90-0e92-4296-99a1-4fa488158079" name="Agmatine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H16N4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H19N7O6" hasOnlySubstanceUnits="true" id="M_dhf_c" metaid="_0cdde813-73c0-4312-a5ac-3270f214d9dd" name="7_8_Dihydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H19N7O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H61N1O10P1" hasOnlySubstanceUnits="true" id="M_ps141_c" metaid="d979247f-71a8-407d-bc8e-9683a02c94fb" name="phosphatidylserine__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H61N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N2O4" hasOnlySubstanceUnits="true" id="M_ppbng_c" metaid="_59903941-7a27-49b5-a881-95339159efd4" name="Porphobilinogen" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Cu" hasOnlySubstanceUnits="true" id="M_cu_p" metaid="e8bcc9b6-666f-4fc5-85b6-a38ecd155920" name="Copper_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cu</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H28N3O19P2" hasOnlySubstanceUnits="true" id="M_uamr_c" metaid="_7aedc4d6-d209-4d7a-9c88-bdf456a7a1a8" name="UDP_N_acetylmuramate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H28N3O19P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H21N5O15P2" hasOnlySubstanceUnits="true" id="M_prlp_c" metaid="b905b0c2-fac2-411a-a2bf-d1590df284b5" name="5___5_phospho_1_deoxyribulos_1_ylamino_methylideneamino__1__5_phosphoribosyl_imidazole_4_carboxamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H21N5O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C32H38N7O19P3S" hasOnlySubstanceUnits="true" id="M_14dhncoa_c" metaid="_68633470-e8bf-451e-8dfd-33ed36f1747c" name="M_14dhncoa_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C32H38N7O19P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_rib_D_p" metaid="_9b4632b8-c810-4aa9-bcef-4dd8c6dac22a" name="M_rib_D_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H1O10P3" hasOnlySubstanceUnits="true" id="M_pppi_c" metaid="_20ac260f-64a1-48ce-95b8-612167d825e9" name="Inorganic_triphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H1O10P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C49H74O4" hasOnlySubstanceUnits="true" id="M_q8_c" metaid="_713ced97-3ec8-4988-9d3e-4b6f02e22aeb" name="Ubiquinone_8" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C49H74O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_rib_D_c" metaid="b609e0d5-8769-49ee-af1c-6bd774cc1742" name="D_Ribose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_rib_D_e" metaid="_7fe4e843-8b2e-4a79-9c69-113790e3fbd3" name="M_rib_D_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H33N4O20P2" hasOnlySubstanceUnits="true" id="M_uama_c" metaid="e88b32e9-3ab7-4339-9dac-ee5d6103e7bd" name="UDP_N_acetylmuramoyl_L_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H33N4O20P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8O5" hasOnlySubstanceUnits="true" id="M_dkdepiins_c" metaid="_57aa188e-b0ff-4aa5-bf0a-0f5ade5ba851" name="D_2_3_diketo_4_deoxy_epi_inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9NO5" hasOnlySubstanceUnits="true" id="M_acglu_c" metaid="_71143921-2770-4402-81e5-ab47f3ce3c7c" name="N_Acetyl_L_glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H9NO5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C74H112N14O39" hasOnlySubstanceUnits="true" id="M_murein5px3p_p" metaid="_9398569c-4242-4675-8c1e-cf6e06b7b4d5" name="two_disacharide_linked_murein_units__pentapeptide_corsslinked_tripeptide__A2pm__A2pm___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C74H112N14O39</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H35O2" hasOnlySubstanceUnits="true" id="M_ocdca_p" metaid="_4270b066-041a-4f59-8667-d54dd587d40e" name="octadecanoate__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H35O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H16N2" hasOnlySubstanceUnits="true" id="M_15dap_c" metaid="_39242362-797d-43b7-9196-266844627539" name="1_5_Diaminopentane" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H16N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H10NO5" hasOnlySubstanceUnits="true" id="M_4adcho_c" metaid="dfc3c1be-3f1c-46e7-baae-871822414165" name="4_amino_4_deoxychorismate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H10NO5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H35O2" hasOnlySubstanceUnits="true" id="M_ocdca_c" metaid="_013a03d1-ca68-44fd-a28c-d3e27ab6b81b" name="octadecanoate__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H35O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O8P" hasOnlySubstanceUnits="true" id="M_dump_c" metaid="_90502e6c-c63e-4585-872c-71a131527779" name="dUMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H35O2" hasOnlySubstanceUnits="true" id="M_ocdca_e" metaid="_01d7b1e3-4e48-4381-aa07-2bfafb8091e3" name="octadecanoate__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H35O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2S" hasOnlySubstanceUnits="true" id="M_met_L_p" metaid="_31660c24-6d1e-44f1-901e-9d1e1a6fd1bd" name="L_Methionine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO2" hasOnlySubstanceUnits="true" id="M_phe_L_c" metaid="efb6a520-6566-47f5-97e2-6b479ac974a7" name="L_Phenylalanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H8N2" hasOnlySubstanceUnits="true" id="M_ind3acnl_c" metaid="_8f6328bd-b54a-481c-ae9a-d62bbec59141" name="Indole_3_acetonitrile" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H8N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO8P" hasOnlySubstanceUnits="true" id="M_gam1p_c" metaid="d5721ea7-3c6b-4522-af59-b79d2ccc5ea0" name="D_Glucosamine_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C46H70O2" hasOnlySubstanceUnits="true" id="M_2ohph_c" metaid="_0fdfb462-13a9-4101-9ec0-697b8a86cb64" name="2_Octaprenyl_6_hydroxyphenol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C46H70O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H78N1O8P1" hasOnlySubstanceUnits="true" id="M_pe181_c" metaid="fd43a421-7afe-430a-b14b-75d2b355a298" name="phosphatidylethanolamine__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41H78N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N2O4" hasOnlySubstanceUnits="true" id="M_dhor_S_c" metaid="_421dc086-7ce2-4b8d-9030-1a5c923a7b2b" name="S__Dihydroorotate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8O9P" hasOnlySubstanceUnits="true" id="M_6pddgluc_c" metaid="_2793caa9-dd17-4761-aa7a-a6efa7a36fac" name="6_phospho_5_dehydro_2_deoxy_D_gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H21N7O6" hasOnlySubstanceUnits="true" id="M_thf_c" metaid="c7211891-9bf2-4e60-b017-af0d573d8261" name="5_6_7_8_Tetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H21N7O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H78N1O8P1" hasOnlySubstanceUnits="true" id="M_pe181_p" metaid="_2b926724-e5fb-40cb-8651-d6b9e7712f48" name="phosphatidylethanolamine__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41H78N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_tre_p" metaid="bbc8cd77-7423-4cba-9801-a0333bfb5efe" name="Trehalose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H22O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H29NO11" hasOnlySubstanceUnits="true" id="M_doxrbcn_p" metaid="c38ad4b2-1917-4507-ac64-0f8d0800ea51" name="doxorubicin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H29NO11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H17N2O7P" hasOnlySubstanceUnits="true" id="M_5prdmbz_c" metaid="_31322133-ee94-4555-bdbc-0ce4d1fcaebc" name="N1__5_Phospho_alpha_D_ribosyl__5_6_dimethylbenzimidazole" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H17N2O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H37N2O8PRS" hasOnlySubstanceUnits="true" id="M_cdec3eACP_c" metaid="_55282680-fafe-4f12-a120-486dd25a84e0" name="cis_dec_3_enoyl__acyl_carrier_protein___n_C10_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H37N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H53N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hcvac11eACP_c" metaid="_9137c6a2-dc9d-4d8f-a838-f0326b61f795" name="R__3_hydroxy_cis_vacc_11_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H53N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H48O5" hasOnlySubstanceUnits="true" id="M_fusa_p" metaid="ff503e73-c9f2-4b3c-8775-6bc323cb4be2" name="fusidic_acid" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H48O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H31O2" hasOnlySubstanceUnits="true" id="M_hdca_e" metaid="_145ff66e-ac94-4a8c-a834-024f1c35ee98" name="Hexadecanoate__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H31O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H23N3O14P2" hasOnlySubstanceUnits="true" id="M_4c2me_c" metaid="_294e9ce7-1a62-4f47-b794-aa14f1cd97c8" name="4__cytidine_5__diphospho__2_C_methyl_D_erythritol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H23N3O14P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H31O2" hasOnlySubstanceUnits="true" id="M_hdca_c" metaid="_10ffd07d-57bf-4f7b-ad24-9f3742897e53" name="Hexadecanoate__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H31O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9O5" hasOnlySubstanceUnits="true" id="M_skm_c" metaid="f1c19d7a-3ba5-48c5-be9b-4107b1b8dced" name="Shikimate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H9O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO4" hasOnlySubstanceUnits="true" id="M_acser_c" metaid="_7a0e7d9e-ac6c-47c6-b80e-7cffd61fe6c4" name="O_Acetyl_L_serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H58O10P1" hasOnlySubstanceUnits="true" id="M_pg120_c" metaid="_69cc85e7-8d6e-49ce-8b76-0e4e45449467" name="Phosphatidylglycerol__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H58O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H26N3O19P2" hasOnlySubstanceUnits="true" id="M_uaccg_c" metaid="_37ec534f-d7ca-48a3-9fe9-c7f96048cb01" name="UDP_N_acetyl_3_O__1_carboxyvinyl__D_glucosamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H26N3O19P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H67O8P" hasOnlySubstanceUnits="true" id="M_pa160_p" metaid="fe0dbd2d-c340-4ad2-864f-963bfd9fe175" name="1_2_dihexadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H67O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H9O10P" hasOnlySubstanceUnits="true" id="M_3psme_c" metaid="d94b5739-b97f-4b86-8b80-835b55bdd053" name="5_O__1_Carboxyvinyl__3_phosphoshikimate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H9O10P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnacys_c" metaid="_90505ec1-a563-4122-bdd0-896e9288e5ad" name="tRNA_Cys_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H15N4O12P" hasOnlySubstanceUnits="true" id="M_25aics_c" metaid="c67d6700-c935-4ec0-9260-96c100b30df9" name="S__2__5_Amino_1__5_phospho_D_ribosyl_imidazole_4_carboxamido_succinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C13H15N4O12P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H29NO11" hasOnlySubstanceUnits="true" id="M_doxrbcn_e" metaid="_0762590e-2935-478c-8104-b4a1dc326bcf" name="doxorubicin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H29NO11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N5O4" hasOnlySubstanceUnits="true" id="M_dhnpt_c" metaid="d54cfcb8-dc3a-4021-8796-53a7230eb806" name="Dihydroneopterin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_tre_e" metaid="b4805ee3-69b6-4e31-b5fb-2e3f0a9cb952" name="Trehalose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H22O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H31O2" hasOnlySubstanceUnits="true" id="M_hdca_p" metaid="cc21791b-825b-4982-8e9d-9dbe5e055551" name="Hexadecanoate__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H31O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H3NO4" hasOnlySubstanceUnits="true" id="M_iasp_c" metaid="_93117f5e-0e6d-4a26-991c-2fbf5b7298c8" name="Iminoaspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H3NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H25N7O17P3" hasOnlySubstanceUnits="true" id="M_nadp_c" metaid="_7a21d41c-2527-4fa5-a89d-c0f684871ac8" name="Nicotinamide_adenine_dinucleotide_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H25N7O17P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N4O8P" hasOnlySubstanceUnits="true" id="M_aicar_c" metaid="c365e5c7-e20c-491b-8600-054f09cfbd2e" name="5_Amino_1__5_Phospho_D_ribosyl_imidazole_4_carboxamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N4O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_ile_L_p" metaid="_25731139-3702-4a6d-966c-ae4d0b79a88d" name="L_Isoleucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O5" hasOnlySubstanceUnits="true" id="M_ins_c" metaid="fca9d728-c3db-4aac-a171-4b2fd1cc7a08" name="Inosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O3Se" hasOnlySubstanceUnits="true" id="M_slnt_c" metaid="d8724f50-c723-4339-90c4-d760b6ff272a" name="M_slnt_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_ile_L_e" metaid="_10d6d005-33ed-4b6a-9940-3b391a2db297" name="L_Isoleucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="O3Se" hasOnlySubstanceUnits="true" id="M_slnt_e" metaid="_66b164a6-1705-494f-905b-2b68072c7e6c" name="M_slnt_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H58O10P1" hasOnlySubstanceUnits="true" id="M_pg120_p" metaid="_8d2f2626-1dd2-4252-9ed9-0ebdb215520a" name="Phosphatidylglycerol__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H58O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_ru5p_D_c" metaid="_4e6d32d9-35cb-48cc-8b7c-551c09c7a4eb" name="D_Ribulose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_ile_L_c" metaid="_29a7e4f6-5584-4bd6-b056-f1832a26f099" name="L_Isoleucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H67O8P" hasOnlySubstanceUnits="true" id="M_pa160_c" metaid="_36623cd0-5efa-4a3e-a7e4-389e9e59611e" name="1_2_dihexadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H67O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H25O7P2" hasOnlySubstanceUnits="true" id="M_frdp_c" metaid="_14d57c51-4548-451c-9235-2ad74a5f1456" name="Farnesyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H25O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnahis_c" metaid="e909d795-209b-4437-8c01-081dddf99e02" name="tRNA_His_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H6NO2" hasOnlySubstanceUnits="true" id="M_anth_c" metaid="e755e642-5aa5-4644-a8cd-b64fe895b125" name="Anthranilate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H6NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="XH2" hasOnlySubstanceUnits="true" id="M_dsbard_p" metaid="b5ea8e0e-dfdc-41a2-b871-13f5e34057c4" name="periplasmic_protein_disulfide_isomerase_I__reduced_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H57O13P2" hasOnlySubstanceUnits="true" id="M_pgp120_c" metaid="_06e4d779-1980-4ed0-888a-4a87b304bd3c" name="Phosphatidylglycerophosphate__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H57O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnamet_c" metaid="_11ed32e7-7671-4cb2-a6d8-003f716f0c48" name="tRNA_Met_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="O3Se" hasOnlySubstanceUnits="true" id="M_slnt_p" metaid="_9a371751-3fa6-44d4-80cd-fd9398bd2621" name="M_slnt_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H51N7O26P2" hasOnlySubstanceUnits="true" id="M_ugmd_c" metaid="_6ce9d60d-b574-4192-be81-79aba1aa37bb" name="UDP_N_acetylmuramoyl_L_alanyl_D_gamma_glutamyl_meso_2_6_diaminopimelate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H51N7O26P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H57O13P2" hasOnlySubstanceUnits="true" id="M_pgp120_p" metaid="_9380ba53-3d75-46e5-a124-f315e5dc9226" name="Phosphatidylglycerophosphate__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H57O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C15668H28496N8O10693P8" hasOnlySubstanceUnits="true" id="M_OLPS_XF_p" metaid="_6b61be36-75b6-4cc1-b813-63b83b808e30" name="M_OLPS_XF_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15668H28496N8O10693P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H7O7" hasOnlySubstanceUnits="true" id="M_micit_c" metaid="_89b182bb-9101-4f1a-9c52-62f1a4245ea4" name="methylisocitrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H7O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C15668H28496N8O10693P8" hasOnlySubstanceUnits="true" id="M_OLPS_XF_e" metaid="_6534f674-cebc-4996-91cd-7c83559f5d44" name="M_OLPS_XF_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15668H28496N8O10693P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P2" hasOnlySubstanceUnits="true" id="M_h2mb4p_c" metaid="e88af32f-52bf-4ea3-96d4-c9ed6f6b9627" name="1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O11P2" hasOnlySubstanceUnits="true" id="M_dudp_c" metaid="_7f99c338-b79b-4a9e-9a3d-55ab23354df3" name="dUDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O11P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O15P3" hasOnlySubstanceUnits="true" id="M_utp_c" metaid="_78f0205b-6045-4d99-afb0-1036908abb19" name="UTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O15P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15668H28496N8O10693P8" hasOnlySubstanceUnits="true" id="M_OLPS_XF_c" metaid="e5ec0980-9d6c-4725-a6d8-01596295f970" name="M_OLPS_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15668H28496N8O10693P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H7NO6PS" hasOnlySubstanceUnits="true" id="M_2c4mthzep_c" metaid="_5e130cfb-277f-428a-a098-650ca7817479" name="M_2c4mthzep_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H7NO6PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O9P" hasOnlySubstanceUnits="true" id="M_xmp_c" metaid="_8099d8a8-dd25-47cf-915e-c00420a9d421" name="Xanthosine_5__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O13P3" hasOnlySubstanceUnits="true" id="M_dctp_c" metaid="a08642fb-55ee-4236-8a19-b968415caa32" name="dCTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O13P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO3" hasOnlySubstanceUnits="true" id="M_tyr_L_c" metaid="_50dc732a-90b1-4d27-bc77-30a603eeef26" name="L_Tyrosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H48O5" hasOnlySubstanceUnits="true" id="M_fusa_e" metaid="a4f39bd6-6d7a-4f83-ab21-906515cb01fe" name="fusidic_acid" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H48O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O3" hasOnlySubstanceUnits="true" id="M_4mop_c" metaid="ec7b9db0-e55f-4b85-a54e-67ba036de2ea" name="4_Methyl_2_oxopentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O14P3" hasOnlySubstanceUnits="true" id="M_gtp_c" metaid="f501b58d-8a76-4c4b-b5b0-0cb6af68405d" name="GTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="SO3" hasOnlySubstanceUnits="true" id="M_so3_c" metaid="_4530d80a-8366-4757-8e42-1a12017a710b" name="Sulfite" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: SO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N2O8P" hasOnlySubstanceUnits="true" id="M_dtmp_c" metaid="_8fa8df5e-f9a6-4a2a-9535-563565b3373c" name="dTMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Ca" hasOnlySubstanceUnits="true" id="M_ca2_p" metaid="a8f8369a-3d8f-471a-980e-ce1a5aa73b7f" name="M_ca2_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ca</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="SO3" hasOnlySubstanceUnits="true" id="M_so3_e" metaid="_770add00-6e39-4481-92b6-c6c36783a157" name="M_so3_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: SO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="SO3" hasOnlySubstanceUnits="true" id="M_so3_p" metaid="_226de117-767b-413e-b81c-90865ae649c2" name="M_so3_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: SO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Ca" hasOnlySubstanceUnits="true" id="M_ca2_e" metaid="a50766e1-e816-4b32-bd89-9ea5ed091798" name="M_ca2_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ca</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H13O10P" hasOnlySubstanceUnits="true" id="M_s7p_c" metaid="fe317856-0f85-41e7-8c01-d8fce29b7d8a" name="Sedoheptulose_7_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H13O10P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N2O6P" hasOnlySubstanceUnits="true" id="M_eig3p_c" metaid="_570003c0-6fb9-48ed-908a-2f1b9254e4ad" name="D_erythro_1__Imidazol_4_yl_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N2O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Ca" hasOnlySubstanceUnits="true" id="M_ca2_c" metaid="_57786765-d0e3-4a2a-ac05-231fa2bfec2d" name="M_ca2_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ca</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO4" hasOnlySubstanceUnits="true" id="M_asp_L_p" metaid="eccbb63e-15b0-4489-8866-49653582bf25" name="L_Aspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnathr_c" metaid="caa87872-92e6-48eb-8128-373ec9bdbf40" name="tRNA_Thr_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O5" hasOnlySubstanceUnits="true" id="M_mal_L_c" metaid="_97fc5cd6-bf2d-42b1-b914-4cefd2653eaf" name="L_Malate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C47H69O3" hasOnlySubstanceUnits="true" id="M_3ophb_c" metaid="f749e6a4-51c6-4758-9ee2-e1082b623069" name="3_Octaprenyl_4_hydroxybenzoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C47H69O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C33H62N1O8P1" hasOnlySubstanceUnits="true" id="M_pe141_c" metaid="f3f86fa3-01b6-4446-b2b3-aeaddbba06eb" name="phosphatidylethanolamine__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C33H62N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H4O2S8Fe2R" hasOnlySubstanceUnits="true" id="M_sufbcd_2fe2s_c" metaid="a5250cc2-3161-4938-b306-d352fac7e26c" name="M_sufbcd_2fe2s_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H4O2S8Fe2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="XH2" hasOnlySubstanceUnits="true" id="M_grxrd_c" metaid="_8b3a6c1e-90fb-4fbd-b760-309122e8d542" name="glutaredoxin__reduced_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H10NO4" hasOnlySubstanceUnits="true" id="M_acg5sa_c" metaid="_9a6a69d9-7816-41ad-8ab3-31de0f63cebd" name="N_Acetyl_L_glutamate_5_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H10NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H52O5" hasOnlySubstanceUnits="true" id="M_12dgr120_c" metaid="_3307887d-664c-42df-99b3-c0d5d6546753" name="1_2_Diacyl_sn_glycerol__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H52O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H17N2O3" hasOnlySubstanceUnits="true" id="M_dtbt_c" metaid="_0af8ca97-a291-4301-b6f0-9f7dadb736a3" name="Dethiobiotin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H17N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C33H62N1O8P1" hasOnlySubstanceUnits="true" id="M_pe141_p" metaid="_4f68c804-0133-4b13-93a2-83e5d3e98b36" name="phosphatidylethanolamine__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C33H62N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C65H116O17P2" hasOnlySubstanceUnits="true" id="M_clpn141_p" metaid="b55e712c-9b04-4968-b46a-97f0ed08440c" name="cardiolipin__tetratetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C65H116O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13OS2" hasOnlySubstanceUnits="true" id="M_lipopb_c" metaid="_9197acaa-244b-4a66-8eed-d7562ebe699a" name="lipoate__protein_bound_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H13OS2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7O6P" hasOnlySubstanceUnits="true" id="M_db4p_c" metaid="be6cc88e-8869-4f0a-95ea-1cec56d68bf0" name="3_4_dihydroxy_2_butanone_4_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO3" hasOnlySubstanceUnits="true" id="M_glu1sa_c" metaid="f8659985-6b20-4514-bdbd-5c4e7b903e27" name="L_Glutamate_1_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C74H114N14O40" hasOnlySubstanceUnits="true" id="M_murein4p4p_p" metaid="_6a913d64-d6ad-45f8-8a62-2825c672fe2e" name="two_linked_disacharide_tetrapeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C74H114N14O40</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="NH4" hasOnlySubstanceUnits="true" id="M_nh4_p" metaid="e3e1fbef-5cca-40a9-a98c-22d68418d224" name="Ammonium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NH4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_xyl_D_p" metaid="_41893ac6-e7a9-4d67-896f-7d614296c101" name="M_xyl_D_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_D_p" metaid="cc2947f7-02aa-4881-b504-703d4e90a8de" name="D_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_xyl_D_c" metaid="_55996ed3-aa03-4e98-9d22-d87f9c5ced2f" name="M_xyl_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H8O2S6R" hasOnlySubstanceUnits="true" id="M_sufbcd_c" metaid="c5d03c04-fb33-411e-a839-cb6400a75a7e" name="M_sufbcd_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H8O2S6R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_xyl_D_e" metaid="_190803c7-1935-49e4-b876-02d5c43612c7" name="M_xyl_D_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe2_c" metaid="_83518b44-6823-4dea-81ce-fabf6225aa85" name="Iron_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe2_e" metaid="_490d747d-96d9-44b5-a74f-ea08c79312b2" name="Iron_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H64N3O20P2" hasOnlySubstanceUnits="true" id="M_u23ga_XF_c" metaid="d830b30e-b667-4e90-b157-3346d21687d9" name="M_u23ga_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H64N3O20P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O2" hasOnlySubstanceUnits="true" id="M_o2s_c" metaid="_03c73ba3-08aa-40cd-b94f-267fccb11f22" name="Superoxide_anion" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="NH4" hasOnlySubstanceUnits="true" id="M_nh4_e" metaid="_238ce08f-7369-4406-88eb-adef1a32991c" name="Ammonium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NH4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H26N7O17P3" hasOnlySubstanceUnits="true" id="M_nadph_c" metaid="_79cb1c70-0605-41de-a3db-25cfc1fba402" name="Nicotinamide_adenine_dinucleotide_phosphate___reduced" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H26N7O17P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="NH4" hasOnlySubstanceUnits="true" id="M_nh4_c" metaid="f4b835be-56be-4913-9e89-389293095d56" name="Ammonium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NH4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe2_p" metaid="e656a6e5-41a0-4119-a49e-ef75e9115fbf" name="Iron_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H22N3O17P3" hasOnlySubstanceUnits="true" id="M_2p4c2me_c" metaid="_84c625cc-fc64-4646-9307-d5026b6bba60" name="2_phospho_4__cytidine_5__diphospho__2_C_methyl_D_erythritol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H22N3O17P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_D_c" metaid="be26013f-3974-45f5-86c0-9aede6e77f48" name="D_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_r5p_c" metaid="c107c6cb-e28d-4921-9a7e-0eb61b9914be" name="alpha_D_Ribose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H52N6O19" hasOnlySubstanceUnits="true" id="M_anhgm3p_p" metaid="e188fdee-dc75-4563-beb0-502ac6769ee4" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H52N6O19</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H73O13P2" hasOnlySubstanceUnits="true" id="M_pgp160_c" metaid="_2e531889-f3ed-462b-9edc-1ef72593aeac" name="Phosphatidylglycerophosphate__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H73O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O10P" hasOnlySubstanceUnits="true" id="M_6pgc_c" metaid="b25c40ad-223d-4863-b211-23866e13e178" name="6_Phospho_D_gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O10P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N2O14P3" hasOnlySubstanceUnits="true" id="M_dttp_c" metaid="_97d315e1-8977-45fa-abb6-cd2266001fbb" name="dTTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N2O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H55N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hoctaACP_c" metaid="cd8a2f3e-3417-498f-aedf-ccd745a14f68" name="R__3_Hydroxyoctadecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H55N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H25N2O9PRS" hasOnlySubstanceUnits="true" id="M_actACP_c" metaid="_6d21b80a-2c5d-460d-b282-74d450bbc9d5" name="Acetoacetyl_ACP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H25N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H52N6O19" hasOnlySubstanceUnits="true" id="M_anhgm3p_c" metaid="_4c36a102-91f7-4e9a-bfe5-7fb7765935e6" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H52N6O19</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H27N2O10PRS" hasOnlySubstanceUnits="true" id="M_egmeACP_c" metaid="ae0a7dd9-3026-414e-8379-a1c2e313a528" name="Enoylglutaryl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H27N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H31N2O10PRS" hasOnlySubstanceUnits="true" id="M_pimACP_c" metaid="_4a6b456d-2fb7-48bc-afc1-f4e457b15704" name="Pimeloyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H31N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H20N7O6" hasOnlySubstanceUnits="true" id="M_methf_c" metaid="c972eb08-db57-420d-9381-e52b69f26d30" name="5_10_Methenyltetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H20N7O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="O2" hasOnlySubstanceUnits="true" id="M_o2_p" metaid="_08237c0b-8d28-4610-8edb-c238b34de557" name="Dioxygen" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H73O13P2" hasOnlySubstanceUnits="true" id="M_pgp160_p" metaid="_810197d9-640e-48b3-bf2f-8d401750eff4" name="Phosphatidylglycerophosphate__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H73O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8NO6P" hasOnlySubstanceUnits="true" id="M_phom_c" metaid="_15898cdc-8b5e-4ebd-9877-8cc61ccd4930" name="O_Phospho_L_homoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H8NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C48H83N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdodec11eg_c" metaid="_46d36596-2ce2-41b5-b835-54c7218187b4" name="CDP_1_2_dioctadec_11_enoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C48H83N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H7O4" hasOnlySubstanceUnits="true" id="M_alac_S_c" metaid="_687953f9-6829-4dd8-823c-84bc6e6c29b3" name="S__2_Acetolactate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H7O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H75O8P" hasOnlySubstanceUnits="true" id="M_pa180_p" metaid="_32343c1c-0a3c-4091-86df-62277eff228c" name="1_2_dioctadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H75O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H52O5" hasOnlySubstanceUnits="true" id="M_12dgr120_p" metaid="ae07c5f0-d23b-484e-97b4-195dda7d543d" name="M_12dgr120_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H52O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12N2O2" hasOnlySubstanceUnits="true" id="M_trp_L_c" metaid="_86423dcb-31bd-4177-b7eb-f7b9c3c27372" name="L_Tryptophan" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H39N5O23P2" hasOnlySubstanceUnits="true" id="M_uamag_c" metaid="_8c17a128-5d55-4f9a-9be4-f4911ab7e4fb" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C28H39N5O23P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C71H107N13O38" hasOnlySubstanceUnits="true" id="M_murein3px4p_p" metaid="a00f4e63-0a18-4c52-810f-238542cdfbc1" name="two_disacharide_linked_murein_units__tripeptide_crosslinked_tetrapeptide__A2pm__D_ala___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C71H107N13O38</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H21N2O7PRS" hasOnlySubstanceUnits="true" id="M_ACP_c" metaid="_472116a4-d2cf-45ba-915d-86b5cc105f06" name="acyl_carrier_protein" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H21N2O7PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O7PS" hasOnlySubstanceUnits="true" id="M_5mdru1p_c" metaid="_71100846-7171-4b77-8870-62eca0fd573d" name="M_5mdru1p_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O7PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H4O2" hasOnlySubstanceUnits="true" id="M_mthgxl_c" metaid="b887965c-9452-42d7-a22e-baa0a5a843ff" name="Methylglyoxal" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H4O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H75O8P" hasOnlySubstanceUnits="true" id="M_pa180_c" metaid="_3732d255-4381-4bb1-8ebd-a90d1432fbe8" name="1_2_dioctadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H75O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H41N2O9PRS" hasOnlySubstanceUnits="true" id="M_3oddecACP_c" metaid="_6ffd781b-5e15-4bb0-adc8-b0b05ec36855" name="3_Oxododecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H41N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H65O13P2" hasOnlySubstanceUnits="true" id="M_pgp140_c" metaid="_5fb87366-9fc9-4a49-b0f1-5c18e13a6018" name="Phosphatidylglycerophosphate__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H65O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3" hasOnlySubstanceUnits="true" id="M_ser_L_c" metaid="b666fa77-cef2-4c37-8d40-a553b728e8ad" name="L_Serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H18N2O4" hasOnlySubstanceUnits="true" id="M_rdmbzi_c" metaid="_9bf3dd91-d3c2-4be1-83b9-d15eb375d1d3" name="N1__alpha_D_ribosyl__5_6_dimethylbenzimidazole" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H18N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H36N4O16" hasOnlySubstanceUnits="true" id="M_uppg3_c" metaid="aefadabf-4806-463b-8dcf-424db614e01e" name="Uroporphyrinogen_III" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C40H36N4O16</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2Se" hasOnlySubstanceUnits="true" id="M_selhcys_c" metaid="add92886-d68c-400d-a608-87b7d2655da8" name="Selenohomocysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3" hasOnlySubstanceUnits="true" id="M_hom_L_c" metaid="bf36d9c9-5f97-41cb-bd84-506bf8977cd0" name="L_Homoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7N" hasOnlySubstanceUnits="true" id="M_indole_c" metaid="c9ff885b-532d-49e6-ac9d-4ab3afdef128" name="M_indole_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H7N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H36N7O18P3S" hasOnlySubstanceUnits="true" id="M_aacoa_c" metaid="d7c74ffc-762e-4458-8aa4-990be3b32b43" name="Acetoacetyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H36N7O18P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H31N2O11PRS" hasOnlySubstanceUnits="true" id="M_opmeACP_c" metaid="_0a001492-7fe0-47cd-babd-0c3415d27b2b" name="3_Oxo_pimeloyl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H31N2O11PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NO2" hasOnlySubstanceUnits="true" id="M_gly_p" metaid="b35981b6-aee2-4541-988d-3eeb4e9a7c26" name="Glycine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H5NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H5O3" hasOnlySubstanceUnits="true" id="M_acac_c" metaid="f897ec0e-395a-4bf1-bba0-bcb8e72c3648" name="Acetoacetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O7P" hasOnlySubstanceUnits="true" id="M_dcmp_c" metaid="_6c621c31-b987-4e9f-9880-794aeff18760" name="dCMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O14P3" hasOnlySubstanceUnits="true" id="M_itp_c" metaid="_774db795-83b1-4585-8485-3bfa0156e766" name="ITP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NO2" hasOnlySubstanceUnits="true" id="M_gly_e" metaid="_11049dd9-1838-42ae-90b6-d7081ea742e8" name="Glycine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H5NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H69N1O10P1" hasOnlySubstanceUnits="true" id="M_ps161_c" metaid="ac18d7e5-0b39-4fb7-b1fc-bb08d4f1ae96" name="phosphatidylserine__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H69N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2R" hasOnlySubstanceUnits="true" id="M_thrtrna_c" metaid="_860a736f-5b1f-44be-8559-f3a648922a5f" name="L_Threonyl_tRNA_Thr_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O2S10Fe4R" hasOnlySubstanceUnits="true" id="M_sufbcd_2fe2s2_c" metaid="a22e912a-1f29-4df2-9e79-f57714fe2a00" name="M_sufbcd_2fe2s2_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2S10Fe4R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H61N9O28P2" hasOnlySubstanceUnits="true" id="M_ugmda_c" metaid="c3bd4715-8445-4d3c-bbde-ea68d321c37b" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamyl_meso_2_6_diaminopimeloyl_D_alanyl_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41H61N9O28P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NO2" hasOnlySubstanceUnits="true" id="M_gly_c" metaid="_1eb1bf75-0a4f-4556-b9a1-367bbb5da0f9" name="Glycine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H5NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H65O13P2" hasOnlySubstanceUnits="true" id="M_pgp140_p" metaid="_36585e3d-b923-4499-9905-981b8a14a1b8" name="Phosphatidylglycerophosphate__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H65O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="XH2" hasOnlySubstanceUnits="true" id="M_dsbcrd_p" metaid="_17c951f0-f66b-4570-bc25-0fc79729db39" name="protein_disulfide_isomerase_II__reduced_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_B_c" metaid="_5eef8089-a73c-420e-a253-fd35255ab7c4" name="beta_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_xylu_D_c" metaid="cac99b80-c7f6-4b10-8f29-6c9bcbe43731" name="D_Xylulose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O2R" hasOnlySubstanceUnits="true" id="M_glntrna_c" metaid="_1afac2e2-a970-45d3-9b2a-a99818ff5717" name="L_Glutaminyl_tRNA_Gln_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="O2" hasOnlySubstanceUnits="true" id="M_o2_e" metaid="_7a3c546d-aae9-400f-8a68-2584af93deab" name="Dioxygen" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O2" hasOnlySubstanceUnits="true" id="M_o2_c" metaid="_920db3b3-4cfd-4d03-a1bb-99fb95379c36" name="Dioxygen" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H21N7O6" hasOnlySubstanceUnits="true" id="M_mlthf_c" metaid="d7a2c78b-dbaf-49fb-97e6-b7bdf8707ee6" name="5_10_Methylenetetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H21N7O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O2" hasOnlySubstanceUnits="true" id="M_gcald_c" metaid="_4045042c-4961-478c-9a3c-9af1e66a3996" name="Glycolaldehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H4O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3" hasOnlySubstanceUnits="true" id="M_ser_L_p" metaid="_1194e4f2-dd8f-4074-9966-92524ee9094c" name="L_Serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H21N3O16P2" hasOnlySubstanceUnits="true" id="M_udpLa4fn_c" metaid="_36f966e5-da63-4c99-8a43-558ae54009cb" name="M_udpLa4fn_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H21N3O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H51N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ocvac11eACP_c" metaid="db6136a2-7b96-4201-be7d-8455a2ca2886" name="3_oxo_cis_vacc_11_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H51N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3" hasOnlySubstanceUnits="true" id="M_ser_L_e" metaid="d0f98745-1684-4a23-bb58-b12c850f41a2" name="L_Serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H14N3O" hasOnlySubstanceUnits="true" id="M_Ncbmpts_c" metaid="c2189df2-d53f-42e3-a49f-4df323c52e6d" name="M_Ncbmpts_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H14N3O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H19O2" hasOnlySubstanceUnits="true" id="M_dca_c" metaid="_66ed4545-1d94-4af3-b8db-d431ff6d993a" name="Decanoate__n_C10_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H19O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O2" hasOnlySubstanceUnits="true" id="M_acetol_c" metaid="e01fadbd-2425-46dc-bf6a-0d89e3023690" name="Acetol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4" hasOnlySubstanceUnits="true" id="M_26dap_LL_c" metaid="_384c9764-e06f-4341-8700-cc42fb02c829" name="LL_2_6_Diaminoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H19O2" hasOnlySubstanceUnits="true" id="M_dca_p" metaid="e4ee61d6-be90-4fe4-a39a-b3fdf5f10d40" name="Decanoate__n_C10_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H19O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7N2" hasOnlySubstanceUnits="true" id="M_aprop_c" metaid="b4654be9-f0de-481b-99db-20c6c45e318b" name="alpha_Aminopropiononitrile" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H70N1O8P1" hasOnlySubstanceUnits="true" id="M_pe161_c" metaid="b4642c87-1848-4d86-a0e9-43f209ea22f7" name="phosphatidylethanolamine__dihexadec_9enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H70N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H70N1O8P1" hasOnlySubstanceUnits="true" id="M_pe161_p" metaid="_06e1ce0a-e5fd-4faa-bb0a-10460b9bbb83" name="phosphatidylethanolamine__dihexadec_9enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H70N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O12P3" hasOnlySubstanceUnits="true" id="M_datp_c" metaid="c8230291-6069-4824-b5c3-bd4a92f40ceb" name="dATP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O12P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H14N2O8P" hasOnlySubstanceUnits="true" id="M_nmn_p" metaid="_90a0300f-a58a-43a6-bdaa-a8f418893a53" name="M_nmn_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H14N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H27N3O7" hasOnlySubstanceUnits="true" id="M_mincyc_p" metaid="_9eec1621-5626-4005-9798-12f0bd29d07d" name="minocycline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H27N3O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H27N3O7" hasOnlySubstanceUnits="true" id="M_mincyc_e" metaid="_97f9c245-fc34-4fdc-82cc-125c0a03dba5" name="minocycline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H27N3O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H31N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hhexACP_c" metaid="_99f7a9f7-c421-452d-a75f-4e1fc7a93682" name="R__3_Hydroxyhexanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H31N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H14N2O8P" hasOnlySubstanceUnits="true" id="M_nmn_c" metaid="c527a149-b573-43fd-a723-0b38da30fd60" name="NMN" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H14N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H14N2O8P" hasOnlySubstanceUnits="true" id="M_nmn_e" metaid="b74a8305-5c42-4e87-93fe-43e5523f2d8c" name="M_nmn_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H14N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O6" hasOnlySubstanceUnits="true" id="M_dkglc_c" metaid="_0aff4c17-50d4-459d-8d62-799a5a7a6700" name="2_deoxy_5_keto_D_gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13N3O3" hasOnlySubstanceUnits="true" id="M_citr_L_c" metaid="b702e36d-a82d-44d2-b37e-3c02741b65b2" name="L_Citrulline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13N3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H66O10P1" hasOnlySubstanceUnits="true" id="M_pg140_c" metaid="c76e89dc-a277-4202-95f8-3ae6b5867643" name="Phosphatidylglycerol__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H66O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H14N5O8P" hasOnlySubstanceUnits="true" id="M_25drapp_c" metaid="e80af714-1c96-4b5b-bdb7-2687affcb2e8" name="2_5_Diamino_6__ribosylamino__4__3H__pyrimidinone_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H14N5O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5O3" hasOnlySubstanceUnits="true" id="M_4hbz_c" metaid="_01257ba0-9cfe-4e3c-92a6-a1755daa91fc" name="4_Hydroxybenzoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N5O20P5" hasOnlySubstanceUnits="true" id="M_gdptp_c" metaid="_74530af1-b0ef-4b97-8d8d-d032e3302ef1" name="Guanosine_3__diphosphate_5__triphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N5O20P5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7N" hasOnlySubstanceUnits="true" id="M_indole_p" metaid="c4486849-9f1e-493a-a783-f4e0f11b44a3" name="M_indole_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H7N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N4OR" hasOnlySubstanceUnits="true" id="M_argtrna_c" metaid="a29f6a64-1972-4bdd-ab20-a07401403bd7" name="L_Arginyl_tRNA_Arg_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N4OR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="S2Fe2" hasOnlySubstanceUnits="true" id="M_2fe2s_c" metaid="_042234e1-a6d4-4292-b6e0-44286a168d5f" name="2Fe_2S__iron_sulfur_cluster" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: S2Fe2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H36FeN4O16" hasOnlySubstanceUnits="true" id="M_sheme_c" metaid="_44458f90-77ca-472f-9d9c-544e52c2a5c1" name="M_sheme_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H36FeN4O16</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H7O3S" hasOnlySubstanceUnits="true" id="M_2kmb_c" metaid="dc176f49-8ff2-46a7-8d86-9197a8296b77" name="M_2kmb_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H7O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H6N2O" hasOnlySubstanceUnits="true" id="M_ncam_c" metaid="_069e618e-c1cd-4e94-8c46-163f9c8650ee" name="Nicotinamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H6N2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H66O10P1" hasOnlySubstanceUnits="true" id="M_pg140_p" metaid="_21d0ab57-2ce0-4bb3-ac3b-3ccd08dd0f74" name="Phosphatidylglycerol__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H66O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C95H152N8O28P2" hasOnlySubstanceUnits="true" id="M_uaagmda_c" metaid="_839ad1c3-0c7f-4c19-acca-2baf0c1dfe00" name="Undecaprenyl_diphospho_N_acetylmuramoyl__N_acetylglucosamine__L_ala_D_glu_meso_2_6_diaminopimeloyl_D_ala_D_ala" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C95H152N8O28P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7N" hasOnlySubstanceUnits="true" id="M_indole_e" metaid="c7b03900-6569-43ef-b1d4-d52ac716312c" name="M_indole_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H7N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO4" hasOnlySubstanceUnits="true" id="M_glu_L_c" metaid="c88ceaf9-ec64-4a8f-ad11-4f5278c32933" name="L_Glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N2O18P2" hasOnlySubstanceUnits="true" id="M_udpglcur_c" metaid="ee49d88c-916d-4d33-a508-9c2c2e573e93" name="UDP_D_glucuronate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H19N2O18P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4" hasOnlySubstanceUnits="true" id="M_dgsn_c" metaid="_8a68773e-a15e-434a-9255-30db16dd9f60" name="Deoxyguanosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O8P" hasOnlySubstanceUnits="true" id="M_gmp_c" metaid="_1fec28c5-4bfe-4f14-88cf-9c69eb01035b" name="GMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H20N3O8S" hasOnlySubstanceUnits="true" id="M_lgt_S_c" metaid="_0f9a8114-4c5e-4b9c-96bb-3f1fd1496125" name="R__S_Lactoylglutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C13H20N3O8S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H24N6O15P2" hasOnlySubstanceUnits="true" id="M_dnad_c" metaid="_54379ba1-6b67-419c-b014-16b8f6e4f0ec" name="Deamino_NAD_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H24N6O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H16NO5" hasOnlySubstanceUnits="true" id="M_pnto_R_c" metaid="a8479452-3800-4d7d-9011-e72a1d15395e" name="R__Pantothenate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H16NO5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CH3NO" hasOnlySubstanceUnits="true" id="M_frmd_c" metaid="_8fdc8aae-84a9-44e2-bfa6-b23c27efad70" name="Formamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH3NO</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H81O13P2" hasOnlySubstanceUnits="true" id="M_pgp180_c" metaid="_3c1a78a0-2626-4e14-a3f8-920fe080e89b" name="Phosphatidylglycerophosphate__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H81O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O3" hasOnlySubstanceUnits="true" id="M_glyclt_p" metaid="_008a959d-4c73-4490-9e90-bfaaa2800594" name="Glycolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="NO3" hasOnlySubstanceUnits="true" id="M_no3_p" metaid="a9461d95-59e4-4416-be08-825cfd9ab462" name="Nitrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H42N7O17P3S" hasOnlySubstanceUnits="true" id="M_hxcoa_c" metaid="_62173060-2365-4b0a-844b-ebe9570612c9" name="Hexanoyl_CoA__n_C6_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H42N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H30N5O9" hasOnlySubstanceUnits="true" id="M_LalaDgluMdapDala_c" metaid="bf130d8a-ea65-4f7a-8fba-05c81f75a16c" name="L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H30N5O9</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O6" hasOnlySubstanceUnits="true" id="M_tartr_D_c" metaid="_3c55486e-a3b2-41b5-9259-17fa9bced04f" name="M_tartr_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_glc_D_p" metaid="fc4e897f-6c9e-4db6-9e88-e152a0314e66" name="D_Glucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc3p_p" metaid="_3d54e1ba-ed15-451c-9697-d90757980854" name="Glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO4" hasOnlySubstanceUnits="true" id="M_glu_L_p" metaid="_2502dd0a-d150-47fd-8c37-bcf8aca3ee2e" name="L_Glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C114H172N22O59" hasOnlySubstanceUnits="true" id="M_murein5px4px4p_p" metaid="_982b8cc4-953e-4d0a-9e96-4b7c42b10abd" name="three_disacharide_linked_murein_units__pentapeptide_crosslinked_tetrapeptide__A2pm__D_ala__tetrapeptide_corsslinked_tetrapeptide__A2pm__D_ala____middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C114H172N22O59</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="XH2" hasOnlySubstanceUnits="true" id="M_dsbdrd_c" metaid="a64e1365-cc16-429a-b6d5-c065eab028b0" name="fused_thiol_disulfide_interchange_protein__reduced_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11NO4" hasOnlySubstanceUnits="true" id="M_chitos_c" metaid="_2bcac2b8-afeb-48f4-ae21-030887e3a747" name="Chitosan" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="SFe2" hasOnlySubstanceUnits="true" id="M_2fe1s_c" metaid="_17a6cca5-606c-4941-b5d6-7835d25c528a" name="2Fe_1S__desulfurated_iron_sulfur_cluster" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: SFe2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7O7P" hasOnlySubstanceUnits="true" id="M_e4p_c" metaid="_39835147-d3d9-49a8-885f-283d08d181fd" name="D_Erythrose_4_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc3p_e" metaid="e5abd030-9340-4a4e-bbbd-5b21d8656a66" name="Glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="NO3" hasOnlySubstanceUnits="true" id="M_no3_c" metaid="f978f7a7-8bf7-4482-b9c2-beca681339e9" name="Nitrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H55O4" hasOnlySubstanceUnits="true" id="M_2hp6mobq_me_c" metaid="_33497ea1-1610-4c76-9877-727932b040a4" name="2_Hexaprenyl_3_methyl_5_hydroxy_6_methoxy_1_4_benzoquinone" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H55O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O3" hasOnlySubstanceUnits="true" id="M_glyclt_e" metaid="_554d2a97-1bee-4264-9fa6-09be7456bcbb" name="Glycolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O3" hasOnlySubstanceUnits="true" id="M_glyclt_c" metaid="_65b2183a-ddcf-4381-9de2-a107d713f3a8" name="Glycolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H30N5O9" hasOnlySubstanceUnits="true" id="M_LalaDgluMdapDala_p" metaid="_1d4db780-a420-49a8-83b6-7216e38f38dd" name="L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H30N5O9</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="NO3" hasOnlySubstanceUnits="true" id="M_no3_e" metaid="e581c969-9254-4298-8248-0014f6c0c620" name="Nitrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc3p_c" metaid="_6feed938-b90a-4460-8d02-c8d50ef986ac" name="Glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H81O13P2" hasOnlySubstanceUnits="true" id="M_pgp180_p" metaid="_2858a7ce-a73d-4680-9ac4-c5dac0db95a5" name="Phosphatidylglycerophosphate__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H81O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO4" hasOnlySubstanceUnits="true" id="M_glu_L_e" metaid="b2a967d6-406d-4bcc-ab0f-b663177bbcdc" name="L_Glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H31N2O10PRS" hasOnlySubstanceUnits="true" id="M_epmeACP_c" metaid="_21d1ec1b-e598-4833-9f17-a385008ae05b" name="Enoylpimeloyl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H31N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="H2" hasOnlySubstanceUnits="true" id="M_h2_p" metaid="f9691f5b-e9a3-46e9-ba1f-01fc7b113133" name="M_h2_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_glc_D_c" metaid="_6565bacc-687b-449e-a5f4-9ca05d63f802" name="D_Glucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_glc_D_e" metaid="_72aab22e-24dc-4b6f-8b30-b0522ba63937" name="D_Glucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NOR" hasOnlySubstanceUnits="true" id="M_phetrna_c" metaid="c3fe7524-0ceb-4b49-936a-7221e11250e1" name="L_Phenylalanyl_tRNA_Phe_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H53N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ooctdACP_c" metaid="_13fdd979-fb86-4511-bba9-1aac7d2c3f2e" name="3_Oxooctadecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H53N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O7" hasOnlySubstanceUnits="true" id="M_glcn_c" metaid="cb536510-dcdf-4b75-a366-17ae03734737" name="D_Gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O2" hasOnlySubstanceUnits="true" id="M_ppa_c" metaid="_9674bdfc-fb67-4d2a-8e5a-6b29aa955e0e" name="Propionate__n_C3_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H18NO8" hasOnlySubstanceUnits="true" id="M_acmum_p" metaid="_8d4998e5-1b2b-460a-b8bd-129c29763583" name="M_acmum_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H18NO8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H74O10P1" hasOnlySubstanceUnits="true" id="M_pg160_c" metaid="_121f3ff0-ac59-41a0-a978-2201a7442d0c" name="Phosphatidylglycerol__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H74O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6NO6P" hasOnlySubstanceUnits="true" id="M_pser_L_c" metaid="e14edc1e-83a9-4b8f-8b17-a9be3ffae083" name="O_Phospho_L_serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3" hasOnlySubstanceUnits="true" id="M_athr_L_c" metaid="_1c12eff7-8faa-474b-a5cd-871c7482cb12" name="L_Allo_threonine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3S" hasOnlySubstanceUnits="true" id="M_cgly_p" metaid="_3f734818-c32c-4729-a252-3045cff50a39" name="Cys_Gly" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H20N6O5S" hasOnlySubstanceUnits="true" id="M_ahcys_c" metaid="_303ab19e-02a1-48ac-8d2c-e25e1dbe9c1e" name="S_Adenosyl_L_homocysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H20N6O5S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="H2" hasOnlySubstanceUnits="true" id="M_h2_e" metaid="bcf85acc-a44f-467a-9cc5-c5e5f281e208" name="M_h2_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H45N2O8PRS" hasOnlySubstanceUnits="true" id="M_tdeACP_c" metaid="_83fee56a-50df-467a-8ab0-75d7032b0bcb" name="cis_tetradec_7_enoyl__acyl_carrier_protein___n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H45N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2" hasOnlySubstanceUnits="true" id="M_h2_c" metaid="_2155aa07-cf0e-4b2f-a153-5d4c88585a86" name="H2" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H10N2O11P" hasOnlySubstanceUnits="true" id="M_orot5p_c" metaid="_39237433-67e9-4f38-a4bd-d779b10786ce" name="Orotidine_5__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H10N2O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_man1p_c" metaid="_3c7cb235-19e6-4f35-8408-9af3a85ca92b" name="D_Mannose_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="XH" hasOnlySubstanceUnits="true" id="M_flxr_c" metaid="_7a8b6c4f-b4c2-4987-9e52-5356b96bfc4b" name="M_flxr_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O3" hasOnlySubstanceUnits="true" id="M_3mop_c" metaid="a523d445-008c-4f73-91d3-478484d82d72" name="S__3_Methyl_2_oxopentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C49H56FeN4O5" hasOnlySubstanceUnits="true" id="M_hemeO_c" metaid="_0862868f-02c0-4967-861e-a89874c6b49a" name="Heme_O" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C49H56FeN4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O7" hasOnlySubstanceUnits="true" id="M_glcn_p" metaid="_30675c26-1429-4eb7-a42f-3b346589fbef" name="D_Gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H74O10P1" hasOnlySubstanceUnits="true" id="M_pg160_p" metaid="_41f5eda1-869c-44af-a7a1-e2ee7a28e24f" name="Phosphatidylglycerol__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H74O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3S" hasOnlySubstanceUnits="true" id="M_cgly_c" metaid="_8f4859cd-9f82-4c9a-88b1-2dd331db4644" name="Cys_Gly" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O4" hasOnlySubstanceUnits="true" id="M_fum_c" metaid="_31430382-6fc5-4576-ae42-16748a9951bf" name="Fumarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_f6p_c" metaid="e58dcf26-8f99-4c9c-a634-506b81f9fb2a" name="D_Fructose_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H47N2O8PRS" hasOnlySubstanceUnits="true" id="M_t3c9palmeACP_c" metaid="_9aeb9984-cc71-424e-8288-087fa414f07d" name="trans_3_cis_9_palmitoleoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H47N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O4" hasOnlySubstanceUnits="true" id="M_fum_e" metaid="fc9ab27f-4e10-4baa-b4d7-a2d9134f3e3f" name="Fumarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_ru5p_L_c" metaid="_5aa83291-7ce9-4bc9-909f-2193bc0ed427" name="M_ru5p_L_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12Cl2N2O5" hasOnlySubstanceUnits="true" id="M_cm_p" metaid="_397a31ba-d391-49b7-b384-000d062a6aaa" name="Chloramphenicol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12Cl2N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C43H58N4O12" hasOnlySubstanceUnits="true" id="M_rfamp_e" metaid="_352e74f1-4166-49d0-bb20-fb3eb7aeb53f" name="rifampin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C43H58N4O12</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C1O2X" hasOnlySubstanceUnits="true" id="M_moadcoo_c" metaid="a8316226-bed9-4f26-93a8-6be58383b8b6" name="MoaD_Protein_with_carboxylate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C1O2X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H51N2O8PRS" hasOnlySubstanceUnits="true" id="M_palmACP_c" metaid="_3762fc7b-6549-4a88-9003-48b60822fd9b" name="Palmitoyl_ACP__n_C16_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H51N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12Cl2N2O5" hasOnlySubstanceUnits="true" id="M_cm_e" metaid="_9a640f21-052a-4b92-9827-f460860e5f2a" name="Chloramphenicol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12Cl2N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C43H58N4O12" hasOnlySubstanceUnits="true" id="M_rfamp_p" metaid="_9e523d1e-bcfb-4063-b0b4-9b52feb69de7" name="rifampin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C43H58N4O12</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O4" hasOnlySubstanceUnits="true" id="M_fum_p" metaid="_074c5051-13ae-413f-946f-848579c350a9" name="Fumarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7NO3" hasOnlySubstanceUnits="true" id="M_2aobut_c" metaid="_846910d3-7931-4ddb-9936-20ee14b3ad7e" name="L_2_Amino_3_oxobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H64O5" hasOnlySubstanceUnits="true" id="M_12dgr161_c" metaid="_73cd75d1-afde-4e2b-9ae1-eee238056f1f" name="1_2_Diacyl_sn_glycerol__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H64O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H51N2O8PRS" hasOnlySubstanceUnits="true" id="M_t3c11vaceACP_c" metaid="_2e9bdb87-6192-421d-bd4b-73afeb5524eb" name="trans_3_cis_11_vacceoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H51N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12NO9P" hasOnlySubstanceUnits="true" id="M_nicrnt_c" metaid="cf878e02-dec2-4a25-aafa-e0c88bc7cc46" name="Nicotinate_D_ribonucleotide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12NO9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O7" hasOnlySubstanceUnits="true" id="M_icit_p" metaid="_2ea942c4-3bb3-4f7b-a6d2-b3dd291513f3" name="M_icit_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C22H24N2O8" hasOnlySubstanceUnits="true" id="M_ttrcyc_p" metaid="c872ba42-6e97-4150-8915-a81262ca281c" name="tetracycline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C22H24N2O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H4O10P2" hasOnlySubstanceUnits="true" id="M_13dpg_c" metaid="_270a294f-95f4-44eb-b2b5-d1521a2fff09" name="3_Phospho_D_glyceroyl_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H4O10P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C22H24N2O8" hasOnlySubstanceUnits="true" id="M_ttrcyc_e" metaid="f670aae4-f0dd-4f6b-8ed1-a4fa8390d25a" name="tetracycline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C22H24N2O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H53N2O8PRS" hasOnlySubstanceUnits="true" id="M_toctd2eACP_c" metaid="_8280755e-4003-4945-8e15-4f0cb979c977" name="trans_octadec_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H53N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O4" hasOnlySubstanceUnits="true" id="M_2ahbut_c" metaid="d2a9e733-d780-46e4-830b-4945c038cd20" name="S__2_Aceto_2_hydroxybutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H122O61" hasOnlySubstanceUnits="true" id="M_dextrin_e" metaid="aba1bc8e-b8b7-490e-956a-4dee1f2680ab" name="M_dextrin_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H122O61</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O6" hasOnlySubstanceUnits="true" id="M_g15l_p" metaid="_0a17ce51-04cc-417a-ab06-c85a5e0c8db2" name="D_Glucono_1_5_lactone" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O7" hasOnlySubstanceUnits="true" id="M_icit_c" metaid="_390ea3f2-ac4d-4790-9ee7-cdb1988ba3c1" name="Isocitrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaarg_c" metaid="_46cb99e1-98d9-44f4-8f95-544977a6f5e7" name="tRNA_Arg_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O6PS" hasOnlySubstanceUnits="true" id="M_dkmpp_c" metaid="d3778e9a-8347-4952-b345-6ecea063cafe" name="M_dkmpp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O6PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H16NO7" hasOnlySubstanceUnits="true" id="M_anhm_c" metaid="d8f281e8-5887-440f-9c17-f97971d3c49e" name="1_6_anhydrous_N_Acetylmuramate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H16NO7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O3" hasOnlySubstanceUnits="true" id="M_dad_5_c" metaid="_162bf943-8215-436c-9a89-d5c63f6d3dfb" name="5__Deoxyadenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Mn" hasOnlySubstanceUnits="true" id="M_mn2_e" metaid="_0ea01ae0-7a5d-47a4-8207-c196a812ded6" name="Mn2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Mn" hasOnlySubstanceUnits="true" id="M_mn2_c" metaid="_83d9933b-0372-4a51-bfc7-169bdd775534" name="Manganese_II_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O6" hasOnlySubstanceUnits="true" id="M_dglca_c" metaid="_03dac608-6eae-4ee4-91b3-0618ed2fc166" name="5_deoxy_D_glucuronate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O3" hasOnlySubstanceUnits="true" id="M_lac_D_c" metaid="_92fe2025-bab0-45f4-89f0-5a654c84b81c" name="D_Lactate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N5O3" hasOnlySubstanceUnits="true" id="M_dhbpt_c" metaid="_2ef223f7-d5f3-4373-8f36-0fbb847f6ab2" name="6_7_Dihydrobiopterin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15N3O8P" hasOnlySubstanceUnits="true" id="M_fpram_c" metaid="_11f9ced6-220d-4c17-bd17-96e8243fe635" name="2__Formamido__N1__5_phospho_D_ribosyl_acetamidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15N3O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C56H104N2O23P2" hasOnlySubstanceUnits="true" id="M_lipidA_XF_c" metaid="edce8bf3-d3c8-44d2-a24c-327cfbec2374" name="M_lipidA_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C56H104N2O23P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H2O6P" hasOnlySubstanceUnits="true" id="M_pep_c" metaid="_2765b289-a330-4856-81c4-71992fa0bb32" name="Phosphoenolpyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H2O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NOSR" hasOnlySubstanceUnits="true" id="M_mettrna_c" metaid="_94574803-7c62-41d4-8341-a609b551a430" name="L_Methionyl_tRNA__Met_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NOSR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Mn" hasOnlySubstanceUnits="true" id="M_mn2_p" metaid="_63cac064-c94d-4dde-b64a-11d3f308d2f5" name="Mn2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C24H36N7O17P3S" hasOnlySubstanceUnits="true" id="M_ppcoa_c" metaid="a27fc8f7-130b-4386-849e-70cb867096c9" name="Propanoyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C24H36N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H39N2O8PRS" hasOnlySubstanceUnits="true" id="M_t3c5ddeceACP_c" metaid="_4bc7d4c1-4433-455a-8181-396b0a525b28" name="trans_3_cis_5_dodecenoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H39N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H58N1O8P1" hasOnlySubstanceUnits="true" id="M_pe120_c" metaid="_2c84ea61-f646-49c6-ac1e-dbc1f2fdf85d" name="phosphatidylethanolamine__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H58N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12N3O" hasOnlySubstanceUnits="true" id="M_histd_c" metaid="d5fb9dd9-a2f3-407e-9b0d-a719c112bc83" name="L_Histidinol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12N3O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H56O5" hasOnlySubstanceUnits="true" id="M_12dgr141_c" metaid="_16a0df8e-1911-417d-b125-2918f2299f9a" name="1_2_Diacyl_sn_glycerol__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H56O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H58N1O8P1" hasOnlySubstanceUnits="true" id="M_pe120_p" metaid="_2efe61fc-09ae-4a2b-b42e-7f9d89a4bb36" name="phosphatidylethanolamine__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H58N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H3NO4" hasOnlySubstanceUnits="true" id="M_quln_c" metaid="_7e704a7e-2d52-4f55-a31c-bb6bf13405bc" name="Quinolinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H3NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H2O6P" hasOnlySubstanceUnits="true" id="M_2pglyc_c" metaid="a9c779bc-73bb-429c-82ac-f1d5e8105b9e" name="2_Phosphoglycolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H2O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3" hasOnlySubstanceUnits="true" id="M_thr_L_e" metaid="_7ed40c3c-689a-4997-b5ad-0079ba185554" name="L_Threonine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3" hasOnlySubstanceUnits="true" id="M_thr_L_c" metaid="ccef9837-5d96-4e60-9c0c-2672a5629645" name="L_Threonine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H25O2" hasOnlySubstanceUnits="true" id="M_ttdcea_p" metaid="f59f3bc5-3c3c-4fd6-ae5b-939942a79ce0" name="tetradecenoate__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H25O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8O4" hasOnlySubstanceUnits="true" id="M_2ippm_c" metaid="d51257c2-db77-41ea-9b03-b8d41edcae98" name="2_Isopropylmaleate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H8O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO7P" hasOnlySubstanceUnits="true" id="M_glu5p_c" metaid="_4523a949-71c1-409d-9cba-ec22cd14f73c" name="L_Glutamate_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4" hasOnlySubstanceUnits="true" id="M_26dap_M_e" metaid="_560a0eeb-b33c-4ace-aef9-bcac1be88ff4" name="M_26dap_M_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14NO5" hasOnlySubstanceUnits="true" id="M_gam_p" metaid="_7d19cc7c-930d-466e-845e-2aedfc790de2" name="M_gam_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H14NO5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H27N7O14P2" hasOnlySubstanceUnits="true" id="M_nadh_c" metaid="feac70b0-8dd4-49dd-9afb-0fc93df5401c" name="Nicotinamide_adenine_dinucleotide___reduced" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H27N7O14P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H25O2" hasOnlySubstanceUnits="true" id="M_ttdcea_e" metaid="bafb266d-7642-47fc-bdc2-40a2f41bf73b" name="tetradecenoate__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H25O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C63H103NO12P2" hasOnlySubstanceUnits="true" id="M_unaga_c" metaid="_97140357-6131-49e4-9c24-ca9e51a3081f" name="M_unaga_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C63H103NO12P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaphe_c" metaid="_36e668f0-8836-43fc-b8c4-e22366d250a1" name="tRNA_Phe_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O6P" hasOnlySubstanceUnits="true" id="M_damp_c" metaid="f801f755-6314-40e9-9e9d-68dd8967bcbf" name="dAMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4" hasOnlySubstanceUnits="true" id="M_26dap_M_p" metaid="_8537f091-4c5b-4e94-9386-71ef84199284" name="M_26dap_M_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H25O2" hasOnlySubstanceUnits="true" id="M_ttdcea_c" metaid="_7387439c-8c10-4deb-b715-adda9dd0959a" name="M_ttdcea_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H25O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14NO5" hasOnlySubstanceUnits="true" id="M_gam_e" metaid="bf3397ff-7c27-49cf-a5e5-8f48f161aba5" name="M_gam_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H14NO5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O4" hasOnlySubstanceUnits="true" id="M_din_c" metaid="_9c2d087d-1c06-4a51-9bc1-8b8202068d0c" name="Deoxyinosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H2O7P" hasOnlySubstanceUnits="true" id="M_3php_c" metaid="_0fb5b963-9894-4c7e-900d-7d5b7f4ccbb1" name="3_Phosphohydroxypyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H2O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4" hasOnlySubstanceUnits="true" id="M_26dap_M_c" metaid="_6b4708cc-8d37-4523-a33a-8a3f548e9865" name="meso_2_6_Diaminoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7NO3" hasOnlySubstanceUnits="true" id="M_aspsa_c" metaid="_1995c6c7-5118-4172-82bb-296c56d148c8" name="L_Aspartate_4_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="NO" hasOnlySubstanceUnits="true" id="M_no_c" metaid="f5066035-7862-4549-9d2b-5e71f281bf18" name="Nitric_oxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C48H74O3" hasOnlySubstanceUnits="true" id="M_2ommbl_c" metaid="_40ed71e3-12af-489c-a5e3-a5ba53cb72bc" name="2_Octaprenyl_3_methyl_6_methoxy__1_4_benzoquinol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C48H74O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H25N4O8" hasOnlySubstanceUnits="true" id="M_LalaDgluMdap_p" metaid="e73ed5ad-98a2-4070-80bc-d3ece99cd822" name="L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H25N4O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="NO" hasOnlySubstanceUnits="true" id="M_no_e" metaid="a0e6dc03-ad15-426d-9a8e-80908dccacac" name="Nitric_oxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H25N4O8" hasOnlySubstanceUnits="true" id="M_LalaDgluMdap_c" metaid="_8624a039-983f-4473-82b6-1b7be44491fa" name="L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H25N4O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CO" hasOnlySubstanceUnits="true" id="M_co_c" metaid="f711aaca-47ad-450e-8cca-6070cf65cd51" name="M_co_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CO</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O10P2" hasOnlySubstanceUnits="true" id="M_dcdp_c" metaid="d547ceea-a425-42bc-87d6-39f4026f90a9" name="dCDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O10P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="CHO2" hasOnlySubstanceUnits="true" id="M_for_e" metaid="_1cf5bbb7-1e75-4de6-bf05-dc6db17d2a86" name="Formate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CHO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H77N1O10P1" hasOnlySubstanceUnits="true" id="M_ps181_c" metaid="b0f4bfe5-188c-46b3-a87f-2c85f2a79d71" name="phosphatidylserine__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H77N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C87H139N7O23P2" hasOnlySubstanceUnits="true" id="M_uagmda_c" metaid="_52361ad1-ff9e-4601-b62f-10d13922c6b9" name="Undecaprenyl_diphospho_N_acetylmuramoyl_L_alanyl_D_glutamyl_meso_2_6_diaminopimeloyl_D_alanyl_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C87H139N7O23P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O11P2" hasOnlySubstanceUnits="true" id="M_gdp_c" metaid="_4d576e1f-6b4a-47cc-963f-9390631ffd78" name="GDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O11P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O14P3" hasOnlySubstanceUnits="true" id="M_ctp_c" metaid="e2a3d3fa-1d81-45c3-8f1b-92f4ffeecca8" name="CTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4S" hasOnlySubstanceUnits="true" id="M_cyst_L_c" metaid="_04430647-1956-47c6-b6e4-6ddb82c1762f" name="L_Cystathionine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O4S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CHO2" hasOnlySubstanceUnits="true" id="M_for_c" metaid="_90d52229-a7c1-4b06-b990-b044c20d6001" name="Formate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CHO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H22N2O17P2" hasOnlySubstanceUnits="true" id="M_udpg_c" metaid="_25040098-e003-4d31-b33b-a7110bc635b2" name="UDPglucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H22N2O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8O14P3" hasOnlySubstanceUnits="true" id="M_prpp_c" metaid="_1fa598cf-8d1c-40fa-ae87-674bb649493b" name="5_Phospho_alpha_D_ribose_1_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H10N5O" hasOnlySubstanceUnits="true" id="M_preq1_c" metaid="_7561f96b-0fd2-4731-9323-d56c511ab333" name="7_aminomethyl_7_deazaguanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H10N5O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C73H132O17P2" hasOnlySubstanceUnits="true" id="M_clpn161_p" metaid="_563f51c7-0c46-4fc5-8a8d-ba9a4903ad18" name="cardiolipin__tetrahexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C73H132O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe3_e" metaid="_48392e55-55a3-43d1-b536-869f6a74fd42" name="Iron_3_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H56O5" hasOnlySubstanceUnits="true" id="M_12dgr141_p" metaid="_754f9919-8169-46b9-8786-2863fde130ee" name="M_12dgr141_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H56O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe3_c" metaid="_8a3ed28f-207c-43fe-b93d-1cc888d93a36" name="Iron_3_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P" hasOnlySubstanceUnits="true" id="M_g3pc_p" metaid="_3038c5c8-ce15-40c6-abc5-8979b9a20954" name="sn_Glycero_3_phosphocholine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H20NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C47H72O3" hasOnlySubstanceUnits="true" id="M_2ombzl_c" metaid="_198940b7-84bf-4c2e-8459-5c043ce406c2" name="2_Octaprenyl_6_methoxy_1_4_benzoquinol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C47H72O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H33N2O8PRS" hasOnlySubstanceUnits="true" id="M_toct2eACP_c" metaid="a191ac13-d59a-4a6b-ae86-5a90fba15916" name="trans_Oct_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H33N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C120H186N24O63" hasOnlySubstanceUnits="true" id="M_murein5p5p5p_p" metaid="_58b3d38e-2db7-4756-83ac-4ccc4b40fed5" name="three_linked_disacharide_pentapeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C120H186N24O63</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10NO2SR" hasOnlySubstanceUnits="true" id="M_fmettrna_c" metaid="be2f4cde-d70c-4406-8a4e-b5a64ac4fcd0" name="N_Formylmethionyl_tRNA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10NO2SR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="NO" hasOnlySubstanceUnits="true" id="M_no_p" metaid="b5ab317d-edc9-4068-9a7a-7877a6a0be75" name="Nitric_oxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C24H33N7O19P3S" hasOnlySubstanceUnits="true" id="M_malcoa_c" metaid="e598fbb1-d731-4b58-ac81-16ff15473763" name="Malonyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C24H33N7O19P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe3_p" metaid="a6c68052-dae6-45cc-8564-bfa30186a4a8" name="Iron_3_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="X" hasOnlySubstanceUnits="true" id="M_dsbaox_p" metaid="_301d5e8f-ca9f-481d-8160-a26c73c5f724" name="periplasmic_protein_disulfide_isomerase_I__oxidized_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H35O7P1" hasOnlySubstanceUnits="true" id="M_1hdec9eg3p_c" metaid="f10511bc-e638-4271-9657-1a007c59f626" name="1_hexadec_9_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H35O7P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H3O3" hasOnlySubstanceUnits="true" id="M_pyr_e" metaid="_2d2e9441-87cd-4cb5-9dae-d9b322fab05c" name="Pyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H39O7P1" hasOnlySubstanceUnits="true" id="M_1odec11eg3p_c" metaid="_355949af-0df1-4d5d-9200-f9726a162b09" name="1_octadec_11_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H39O7P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H3O3" hasOnlySubstanceUnits="true" id="M_pyr_c" metaid="_7a730f38-2843-43f2-a9c2-db9dbd8454a6" name="Pyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9NO8P" hasOnlySubstanceUnits="true" id="M_acg5p_c" metaid="_9587ca03-006b-4462-bba4-1653f9d3be4c" name="N_Acetyl_L_glutamyl_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H9NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO4" hasOnlySubstanceUnits="true" id="M_asp_L_c" metaid="_8ef34f64-9157-434e-9d4e-2f71a589e3a1" name="L_Aspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO4" hasOnlySubstanceUnits="true" id="M_asp_L_e" metaid="_97882726-764d-40b7-8ecd-54c5ae404ee5" name="L_Aspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C55H89O4P" hasOnlySubstanceUnits="true" id="M_udcpp_c" metaid="fbdecdc5-da38-4485-9402-e37a7ee8e96d" name="Undecaprenyl_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C55H89O4P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_h_p" metaid="dad4a909-6ffc-4ebb-a221-6e8a92044868" name="proton_H_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_L_p" metaid="_43a0d9fd-6b9b-4ece-a292-f121ca1df4ed" name="L_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H4NO2" hasOnlySubstanceUnits="true" id="M_nac_e" metaid="_43e8eaa8-5a8e-4ab1-9f04-6aa38022fcc0" name="Nicotinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H4NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO3" hasOnlySubstanceUnits="true" id="M_glu5sa_c" metaid="_0902e050-92cb-4616-b47f-da9cba6a8230" name="L_Glutamate_5_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H4NO2" hasOnlySubstanceUnits="true" id="M_nac_c" metaid="c2dbb7ce-9fe2-454a-af2e-5fb6ab06ed23" name="Nicotinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H4NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="X" hasOnlySubstanceUnits="true" id="M_grxox_c" metaid="fc14c6e0-1cb3-43ed-bf25-0050931862ea" name="glutaredoxin__oxidized_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H72O5" hasOnlySubstanceUnits="true" id="M_12dgr181_c" metaid="_37ab8510-c554-4d80-877b-373eb15f23bf" name="1_2_Diacyl_sn_glycerol__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H72O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H4NO2" hasOnlySubstanceUnits="true" id="M_nac_p" metaid="a45e0051-33de-4c18-9c02-cb86aed92e9c" name="Nicotinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H4NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C55H89O4P" hasOnlySubstanceUnits="true" id="M_udcpp_p" metaid="_07c547ef-ba13-4bff-bbab-46534805b2a6" name="Undecaprenyl_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C55H89O4P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H72O5" hasOnlySubstanceUnits="true" id="M_12dgr181_p" metaid="_7df07bcf-bf48-4acf-a654-02364352ec1e" name="M_12dgr181_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H72O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H31N9O15P2" hasOnlySubstanceUnits="true" id="M_fad_c" metaid="cd16f790-67a3-4fc2-a2cd-aecf6e72c44a" name="Flavin_adenine_dinucleotide_oxidized" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H31N9O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O7P2" hasOnlySubstanceUnits="true" id="M_dmpp_c" metaid="b2544a1f-0dc7-49d5-9a1b-18fa03419b09" name="Dimethylallyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO7P" hasOnlySubstanceUnits="true" id="M_4pasp_c" metaid="_53e3625c-2d16-4306-9cb8-acf6724f9cd6" name="4_Phospho_L_aspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6NO7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H13N6O3" hasOnlySubstanceUnits="true" id="M_dhpt_c" metaid="_0c240f4f-7f99-4dbc-ac4b-d27d264700ae" name="Dihydropteroate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H13N6O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H43N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ocmrs7eACP_c" metaid="e8804b0a-f001-40a8-b73c-7f148cd1c30e" name="3_oxo_cis_myristol_7_eoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H43N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO3R" hasOnlySubstanceUnits="true" id="M_glutrna_c" metaid="c63b44f5-a227-40a5-8110-461e7664c5e2" name="L_Glutamyl_tRNA_Glu_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO3R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O5" hasOnlySubstanceUnits="true" id="M_oaa_c" metaid="_54e0d9f5-b91e-48f1-b964-c6d4504b8933" name="Oxaloacetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_L_c" metaid="a136a98d-77aa-4926-b835-cb7b7364bd5b" name="L_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O6" hasOnlySubstanceUnits="true" id="M_xtsn_c" metaid="_13634181-c76a-4a81-b729-e1e18323b2ec" name="Xanthosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O5" hasOnlySubstanceUnits="true" id="M_oaa_e" metaid="_39f1b8aa-d3a3-4cb2-84a8-96c9406e664e" name="M_oaa_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaala_c" metaid="_241262b3-1524-4949-b2f2-307c77e80759" name="tRNA_Ala_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O3" hasOnlySubstanceUnits="true" id="M_3hpp_p" metaid="_1cd48d3e-3831-4e76-ac5c-b6237e335ed3" name="3_Hydroxypropanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_L_e" metaid="e2883b30-80ea-47a4-a3a5-03271a3893cd" name="L_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_mi1p_D_c" metaid="f1cf004a-6ae1-4dfa-8855-6d68f21c58fe" name="1D_myo_Inositol_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6NO5S2" hasOnlySubstanceUnits="true" id="M_scys_L_c" metaid="_7ebc2b90-6180-45f7-bd7b-7121cc072a5e" name="S_Seleno_L_cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6NO5S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O5" hasOnlySubstanceUnits="true" id="M_oaa_p" metaid="_0c6ba5c2-a68f-4439-9bb4-e7b1077b2030" name="M_oaa_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N3O9P" hasOnlySubstanceUnits="true" id="M_5aizc_c" metaid="e0424e3d-345a-4d11-881b-4500f38d4b43" name="5_amino_1__5_phospho_D_ribosyl_imidazole_4_carboxylate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N3O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaval_c" metaid="_9307e0c3-9ddb-4e62-ae32-9693117c070e" name="tRNA_Val_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H7O4" hasOnlySubstanceUnits="true" id="M_dhna_c" metaid="c6a93da8-05cc-4361-bfec-283bfdd5c597" name="M_dhna_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H7O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H51O8P1" hasOnlySubstanceUnits="true" id="M_pa120_p" metaid="e3fff18b-7796-462c-98e1-3d485f513e96" name="1_2_didodecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H51O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O3" hasOnlySubstanceUnits="true" id="M_3hpp_e" metaid="b0d55aa8-bf10-42c8-b8ea-123b123a6cdf" name="3_Hydroxypropanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_h_c" metaid="_68418409-f335-431c-8996-4d0f8aa940b0" name="proton_H_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O3" hasOnlySubstanceUnits="true" id="M_3hpp_c" metaid="c5750266-8367-4dcd-b8b6-0c79a496084e" name="3_Hydroxypropanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaglu_c" metaid="d6f2c2e1-8337-449e-a46c-53bb916b88db" name="tRNA__Glu_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_gal1p_c" metaid="f6679c5a-159e-4867-a60f-268f845fd101" name="alpha_D_Galactose_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_h_e" metaid="f1b6cbf1-69eb-4bd8-bc37-e876e4dc85e7" name="proton_H_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H3O7" hasOnlySubstanceUnits="true" id="M_osucc_c" metaid="_4a139b8b-b190-4e29-8295-00af65fb89c0" name="M_osucc_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H3O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="XH" hasOnlySubstanceUnits="true" id="M_flxso_c" metaid="_140e86df-cba4-483b-8e4d-ea8c89da50a2" name="M_flxso_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H51O8P1" hasOnlySubstanceUnits="true" id="M_pa120_c" metaid="a35ecd9e-5d62-4720-9a48-86c83d293bd9" name="1_2_didodecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H51O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O3S2" hasOnlySubstanceUnits="true" id="M_tsul_c" metaid="d5bf1430-b236-471e-bffd-330ad08312c6" name="Thiosulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N2O2" hasOnlySubstanceUnits="true" id="M_lys_L_c" metaid="fa6e293e-3fc4-40c4-b78f-a3ceef2b3e7d" name="L_Lysine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N2O2" hasOnlySubstanceUnits="true" id="M_lys_L_e" metaid="_4ea2de50-4355-4717-98d8-2977165565eb" name="L_Lysine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="O3S2" hasOnlySubstanceUnits="true" id="M_tsul_e" metaid="b17c51b1-e8d8-4454-8a75-5cac7f4af518" name="Thiosulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="HO3P" hasOnlySubstanceUnits="true" id="M_ppt_p" metaid="f0b9118e-7dd4-4e5b-a9a9-1599f516994b" name="M_ppt_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HO3P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4O5" hasOnlySubstanceUnits="true" id="M_akg_c" metaid="ef5bb962-1082-46f1-90e2-7b6c96207e48" name="2_Oxoglutarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O15P3" hasOnlySubstanceUnits="true" id="M_xtp_c" metaid="_4c1d2621-fb1a-4c64-96df-a2c128dc8ed0" name="XTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O15P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8N2O2" hasOnlySubstanceUnits="true" id="M_acybut_c" metaid="_409ab852-6cdf-4bd0-a2b1-99105412ba43" name="gamma_Amino_gamma_cyanobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NOR" hasOnlySubstanceUnits="true" id="M_protrna_c" metaid="_12a0bbef-367e-4a3f-a6ce-427bceda6fd3" name="L_Prolyl_tRNA_Pro_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="O3S2" hasOnlySubstanceUnits="true" id="M_tsul_p" metaid="_3b16619b-907b-45e5-a6da-20824985c4e5" name="Thiosulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H39N4O16" hasOnlySubstanceUnits="true" id="M_scl_c" metaid="c7883cb2-fde3-45fa-91b6-770f6b03edcb" name="sirohydrochlorin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H39N4O16</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8O5" hasOnlySubstanceUnits="true" id="M_3c4mop_c" metaid="d5d937ae-07a7-41fa-a701-79824c479f48" name="3_Carboxy_4_methyl_2_oxopentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H8O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N2O11P2" hasOnlySubstanceUnits="true" id="M_dtdp_c" metaid="eb377850-c371-43a8-9858-d993a35f49e9" name="dTDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N2O11P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N2O2" hasOnlySubstanceUnits="true" id="M_lys_L_p" metaid="_2e07cfe9-2dca-49f6-b2a4-e17cae15f282" name="L_Lysine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4O5" hasOnlySubstanceUnits="true" id="M_akg_e" metaid="_6411d276-b49e-4441-9c4c-c94102396cce" name="2_Oxoglutarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H12N2O5P" hasOnlySubstanceUnits="true" id="M_pyam5p_c" metaid="f650fd4e-8782-49c2-bda0-c40585363fee" name="Pyridoxamine_5__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H12N2O5P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NOR" hasOnlySubstanceUnits="true" id="M_alatrna_c" metaid="e56d57ec-8f7a-440b-a12b-6e4631b95919" name="L_Alanyl_tRNA_Ala_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4O5" hasOnlySubstanceUnits="true" id="M_akg_p" metaid="a67f052f-35bd-43c1-adb8-4e43508bf222" name="2_Oxoglutarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H46N7O17P3S" hasOnlySubstanceUnits="true" id="M_occoa_c" metaid="_0f007fc3-d373-4035-a2a1-4ea49468e43a" name="Octanoyl_CoA__n_C8_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H46N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O12P2" hasOnlySubstanceUnits="true" id="M_tagdp_D_c" metaid="_894c8e6c-31b5-4de0-bf03-4652ee16400b" name="D_Tagatose_1_6_biphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O12P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H33N2O10PRS" hasOnlySubstanceUnits="true" id="M_pmeACP_c" metaid="db986ad5-99cc-40d9-9744-16526c914d14" name="Pimeloyl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H33N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O8P" hasOnlySubstanceUnits="true" id="M_imp_c" metaid="d69bee01-9927-4531-8711-2d454cad6a4a" name="IMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H20N6O5Se" hasOnlySubstanceUnits="true" id="M_seahcys_c" metaid="_4258087e-c242-4d51-9ebb-48744feb508d" name="Se_Adenosylselenohomocysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H20N6O5Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H82O10P1" hasOnlySubstanceUnits="true" id="M_pg180_c" metaid="_96c00e78-4cd1-43d7-8325-80821e27a87e" name="Phosphatidylglycerol__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H82O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H33N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ooctACP_c" metaid="c85f425a-ae23-4a02-b515-8ba08eda764e" name="3_Oxooctanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H33N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H29N2O11PRS" hasOnlySubstanceUnits="true" id="M_hgmeACP_c" metaid="_6e93e55a-7e7f-4345-9c06-863a26d45a85" name="3_Hydroxyglutaryl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H29N2O11PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H17O7P2" hasOnlySubstanceUnits="true" id="M_grdp_c" metaid="_49fb8505-c10b-486b-82f3-5692426ba994" name="Geranyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H17O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H23N5O16P2" hasOnlySubstanceUnits="true" id="M_gdpmann_c" metaid="de438222-54cc-4726-952e-75035bf84528" name="GDP_D_mannose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H23N5O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H3O3" hasOnlySubstanceUnits="true" id="M_pyr_p" metaid="c4099479-3078-4c0b-8bff-7948647ffa56" name="Pyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HS2R" hasOnlySubstanceUnits="true" id="M_iscssh_c" metaid="_5ba18a87-4bba-4353-95f1-513b68844dfa" name="IscS_with_bound_sulfur" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HS2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12O13P2" hasOnlySubstanceUnits="true" id="M_s17bp_c" metaid="dba98b8f-c61e-49d1-a284-4714f266848d" name="M_s17bp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H12O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H82O10P1" hasOnlySubstanceUnits="true" id="M_pg180_p" metaid="_6bd73a39-fbae-4d25-bdc5-5fd6441fda1d" name="Phosphatidylglycerol__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H82O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H47N2O8PRS" hasOnlySubstanceUnits="true" id="M_myrsACP_c" metaid="df44ad25-ac95-45d0-9647-879f707a7471" name="Myristoyl_ACP__n_C14_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H47N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H56N8O27P2" hasOnlySubstanceUnits="true" id="M_um4p_c" metaid="a0d3e7b3-1f92-41ea-8f6c-ba87600e87fb" name="UDP_N_acetylmuramoyl_L_alanyl_D_gamma_glutamyl_meso_2_6_diaminopimelate_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H56N8O27P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H14NO9P" hasOnlySubstanceUnits="true" id="M_acgam6p_c" metaid="dc2c18e5-6558-4019-ad49-1e3b80ebef8c" name="N_Acetyl_D_glucosamine_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H14NO9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="XH2" hasOnlySubstanceUnits="true" id="M_dsbgrd_p" metaid="eff717fd-49e3-488e-8606-499039426a48" name="M_dsbgrd_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_leu_L_p" metaid="_815c4d68-bc29-42b2-aee9-6e71f5fd471e" name="L_Leucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="AsO4" hasOnlySubstanceUnits="true" id="M_aso4_c" metaid="e0a1b8f9-6211-4b7a-b8bb-01cd95f33365" name="Arsenate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: AsO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="X" hasOnlySubstanceUnits="true" id="M_dsbcox_p" metaid="_20ca6384-7107-4748-920a-e081ce8740bf" name="protein_disulfide_isomerase_II__oxidized_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_D_c" metaid="_1d0c9062-4b33-4ade-836b-0f41149578d2" name="M_cys_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C81H148O17P2" hasOnlySubstanceUnits="true" id="M_clpn181_p" metaid="_1c51d3b9-7219-4a23-a8cd-4d419ce90c58" name="cardiolipin__tetraoctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C81H148O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_D_e" metaid="b01d433a-64f0-4020-a983-b8e0634c2f39" name="M_cys_D_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5NO4S" hasOnlySubstanceUnits="true" id="M_3sala_c" metaid="_63991681-2ab2-40a1-8153-0d0cfba427e9" name="M_3sala_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5NO4S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_leu_L_e" metaid="_567f5eb0-dc47-4e7a-853f-e3754d6e0810" name="L_Leucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H18N2O16P2" hasOnlySubstanceUnits="true" id="M_udpLa4o_c" metaid="_73df25c6-e744-404d-a867-5f34259d0693" name="M_udpLa4o_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H18N2O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H64O5" hasOnlySubstanceUnits="true" id="M_12dgr161_p" metaid="_82d8a338-3515-4257-84e3-2e9c6b224bb1" name="M_12dgr161_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H64O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_leu_L_c" metaid="b0ac6125-caf8-4276-8069-6f5d009bead4" name="L_Leucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5N" hasOnlySubstanceUnits="true" id="M_bzonit_c" metaid="_75292c17-90aa-4b78-9352-2043ad74c04d" name="Benzonitrile" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8N3O4P" hasOnlySubstanceUnits="true" id="M_4ampm_c" metaid="_26c01e93-50ec-4b08-a1e1-191ffe0bc728" name="4_Amino_2_methyl_5_phosphomethylpyrimidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8N3O4P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H29N2O12" hasOnlySubstanceUnits="true" id="M_anhgm_c" metaid="_77e3b37d-7cba-4b89-94ee-8fd98c3abce5" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramic_acid" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H29N2O12</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H126N2O37P2" hasOnlySubstanceUnits="true" id="M_kdo2lipid4_XF_c" metaid="_60e9bc22-f9f6-4f58-8f58-98f644ba003f" name="M_kdo2lipid4_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H126N2O37P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C74H114N14O40" hasOnlySubstanceUnits="true" id="M_murein5p3p_p" metaid="d096ffe1-da0f-4e1d-bd61-620f8fd34348" name="two_linked_disacharide_pentapeptide_and_tripeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C74H114N14O40</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O11P2" hasOnlySubstanceUnits="true" id="M_idp_c" metaid="_621697eb-74bf-4ad1-885c-c3c9cebb13c7" name="IDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O11P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6NO2" hasOnlySubstanceUnits="true" id="M_1pyr5c_c" metaid="_5a7d2518-c748-4b90-b2ee-4e14720b3e61" name="1_Pyrroline_5_carboxylate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H126N2O37P2" hasOnlySubstanceUnits="true" id="M_kdo2lipid4_XF_e" metaid="f14e0454-e072-40c1-879e-1965b3ff0fc7" name="M_kdo2lipid4_XF_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H126N2O37P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H13NO9P" hasOnlySubstanceUnits="true" id="M_pran_c" metaid="_51841d19-27f5-4c5a-b36c-f035d475c09d" name="N__5_Phospho_D_ribosyl_anthranilate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H13NO9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_xu5p_D_c" metaid="_907b93b7-6be0-44dd-9165-b1bc108b8e60" name="D_Xylulose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H22N2O10PRS" hasOnlySubstanceUnits="true" id="M_malACP_c" metaid="e3f679de-fe9b-4b89-93ca-4d57782a66e6" name="Malonyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H22N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H3O3" hasOnlySubstanceUnits="true" id="M_msa_c" metaid="_0d762fd3-71c4-4529-b200-7bc4f8b1f35b" name="Malonate_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O6P" hasOnlySubstanceUnits="true" id="M_dhap_c" metaid="df0429d8-48ee-4ebd-8476-05f607e62cfb" name="Dihydroxyacetone_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O7" hasOnlySubstanceUnits="true" id="M_cit_c" metaid="_83a1b111-befa-49a2-84c4-ab6eb3cb52af" name="Citrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H29N2O12" hasOnlySubstanceUnits="true" id="M_anhgm_p" metaid="e768bf82-dfbd-493b-b2b8-fd48dd4b3921" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramic_acid" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H29N2O12</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H24N10O19P4" hasOnlySubstanceUnits="true" id="M_ap4a_c" metaid="_51621837-3db4-461c-ba68-daa702e55f16" name="P1_P4_Bis_5__adenosyl__tetraphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H24N10O19P4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5N2O2" hasOnlySubstanceUnits="true" id="M_urcan_c" metaid="_5c743639-01c9-4034-88a4-fd1a3a711f30" name="Urocanate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O7" hasOnlySubstanceUnits="true" id="M_cit_e" metaid="_1e3735ba-e736-42df-8d6f-8a9542a04881" name="Citrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H126N2O37P2" hasOnlySubstanceUnits="true" id="M_kdo2lipid4_XF_p" metaid="_865f8957-d223-4884-b75c-07b819961598" name="M_kdo2lipid4_XF_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H126N2O37P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H38N4O4" hasOnlySubstanceUnits="true" id="M_pppg9_c" metaid="a39d6345-6a0d-4358-9088-cf1204117095" name="Protoporphyrinogen_IX" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H38N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H122O61" hasOnlySubstanceUnits="true" id="M_14aglucan_e" metaid="_43ccbf86-2d88-499a-9f01-2dd79b4d4a79" name="M_14aglucan_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H122O61</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H122O61" hasOnlySubstanceUnits="true" id="M_14aglucan_c" metaid="_5749ed56-6e05-4901-9b4b-b5dfee5733c8" name="1_4_alpha_D_Glucosyl_n" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H122O61</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NOR" hasOnlySubstanceUnits="true" id="M_glytrna_c" metaid="_4a83b6ff-cd79-43e3-8aa4-8e0d9bfde226" name="Glycyl_tRNA_Gly_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H5NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H49N2O8PRS" hasOnlySubstanceUnits="true" id="M_hdeACP_c" metaid="da832ba9-9348-4a4b-9fcf-8128e12a24f7" name="cis_hexadec_9_enoyl__acyl_carrier_protein___n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H49N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O9P2" hasOnlySubstanceUnits="true" id="M_dadp_c" metaid="_0ea2039b-4061-4345-8af5-ada4eac793ec" name="dADP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O9P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H122O61" hasOnlySubstanceUnits="true" id="M_14aglucan_p" metaid="_906cd203-bd17-4164-9158-fbbed1e862ac" name="M_14aglucan_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H122O61</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O7" hasOnlySubstanceUnits="true" id="M_cit_p" metaid="d14e510b-4acd-44f7-88e3-d883529a9812" name="Citrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O2" hasOnlySubstanceUnits="true" id="M_hxa_c" metaid="efbea65b-9d47-4614-8b70-9ca95f446dc9" name="Hexanoate__n_C6_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnatyr_c" metaid="_1bd65fd4-64bf-4feb-a711-1460105a0c36" name="tRNA_Tyr_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="CH3O3S" hasOnlySubstanceUnits="true" id="M_mso3_e" metaid="fa3f8603-57c4-4e14-a648-8cd4efaddbc4" name="methanesulfonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH3O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CH3O3S" hasOnlySubstanceUnits="true" id="M_mso3_c" metaid="ee1ab707-2158-424d-9184-aae220a5e737" name="methanesulfonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH3O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4N2O2" hasOnlySubstanceUnits="true" id="M_ura_c" metaid="c46235c5-0aa5-444e-83e7-94c55e9f4e91" name="Uracil" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H27N2O14P" hasOnlySubstanceUnits="true" id="M_chtbs6p_c" metaid="_9bdd4880-3d07-4a9a-a72b-5cef7fac4128" name="M_chtbs6p_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H27N2O14P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H25N3O17P2" hasOnlySubstanceUnits="true" id="M_uacgam_c" metaid="b30f5402-fc0a-4542-81ec-6eb62f3d22d1" name="UDP_N_acetyl_D_glucosamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H25N3O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4N2O2" hasOnlySubstanceUnits="true" id="M_ura_e" metaid="ccfc70ef-41a5-42a6-81c1-b46663f039d8" name="M_ura_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H25N3O16P2" hasOnlySubstanceUnits="true" id="M_udpacfuc_c" metaid="d3296540-f850-4c00-8d52-8a6584778037" name="M_udpacfuc_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H25N3O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O2" hasOnlySubstanceUnits="true" id="M_hxa_p" metaid="aabefeb0-b032-4613-90e2-50e217087b0b" name="Hexanoate__n_C6_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="CH3O3S" hasOnlySubstanceUnits="true" id="M_mso3_p" metaid="a6f41b1d-5495-4a4a-81c6-a2f8f207215c" name="methanesulfonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH3O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4N2O2" hasOnlySubstanceUnits="true" id="M_ura_p" metaid="_8bdfb689-18da-4a6b-8278-2a2c65065ca6" name="M_ura_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H59O8P1" hasOnlySubstanceUnits="true" id="M_pa140_c" metaid="_5a4391db-b9ee-403d-bbbf-69573a3f3e23" name="1_2_ditetradecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H59O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N5O10P2" hasOnlySubstanceUnits="true" id="M_pap_c" metaid="_6eda61d5-8a33-4a54-b717-9f489f619aca" name="Adenosine_3__5__bisphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N5O10P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnapro_c" metaid="_6922d10c-bdf3-4ac4-9008-42f8753800e1" name="tRNA_Pro_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_D_p" metaid="_4824fa5f-73d8-45e7-b781-7d9390953608" name="M_cys_D_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H14N2" hasOnlySubstanceUnits="true" id="M_ptrc_c" metaid="c453ad0a-9c46-44c6-99fc-d1a00c8a4979" name="Putrescine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H14N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H14N2" hasOnlySubstanceUnits="true" id="M_ptrc_e" metaid="_9a6a8e7b-11d7-443a-a435-e3864359232b" name="Putrescine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H14N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H16N4O4PS" hasOnlySubstanceUnits="true" id="M_thmmp_c" metaid="_13decc39-a41f-4a2e-a73a-36731e84d6d0" name="Thiamin_monophosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H16N4O4PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H47N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ocpalm9eACP_c" metaid="_0884f9ed-92ea-4902-b209-cc1a46219385" name="3_oxo_cis_palm_9_eoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H47N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_g6p_c" metaid="c4353cf2-27e9-4c56-b9ac-e5ee8c23e8dc" name="D_Glucose_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H59O8P1" hasOnlySubstanceUnits="true" id="M_pa140_p" metaid="_5d254239-e98b-4a67-bddc-19ff12646b0f" name="1_2_ditetradecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H59O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H47N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hmrsACP_c" metaid="_70619344-3e7b-4386-bb9f-0daba264f997" name="R__3_Hydroxytetradecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H47N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H14N2" hasOnlySubstanceUnits="true" id="M_ptrc_p" metaid="_86f3a98d-4598-4a29-85f5-f393f0e6e519" name="Putrescine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H14N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H21N5O15P2" hasOnlySubstanceUnits="true" id="M_gdp4d6dm_c" metaid="a954935d-5ef2-4be6-9881-cd849b42fd81" name="M_gdp4d6dm_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H21N5O15P2</p> + </body> + </notes> + </species> + </listOfSpecies> + <listOfParameters> + <parameter constant="true" id="UPPER_BOUND_99999_0" units="mmol_per_gDW_per_hr" value="99999"/> + <parameter constant="true" id="LOWER_BOUND_0_0" units="mmol_per_gDW_per_hr" value="0"/> + <parameter constant="true" id="LOWER_BOUND_99999_0" units="mmol_per_gDW_per_hr" value="-99999"/> + </listOfParameters> + <listOfReactions> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUPRT" metaid="_14369fd2-8f83-4ef5-a5bc-80f277a1cbbf" name="glutamine_phosphoribosyldiphosphate_amidotransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000770</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 2.4.2.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_14369fd2-8f83-4ef5-a5bc-80f277a1cbbf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000770"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pram_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG180abcpp" metaid="_309b13d3-cbb6-4182-ac1d-46340890b347" name="phosphatidylglycerol_transport_via_ABC_system__n_C18_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_309b13d3-cbb6-4182-ac1d-46340890b347"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg180_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HYXNtex" metaid="fc02e5bf-c6fd-48eb-8077-c7b72c8d14ea" name="Hypoxanthine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fc02e5bf-c6fd-48eb-8077-c7b72c8d14ea"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hxan_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hxan_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LEUtex" metaid="_4335a7b1-bbd5-44dd-9c9a-ebcc1fa9676b" name="L_leucine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4335a7b1-bbd5-44dd-9c9a-ebcc1fa9676b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_leu_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_leu_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METTRS" metaid="ad24d68c-cf9b-45ab-abd3-56446f8d42ed" name="Methionyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006950</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ad24d68c-cf9b-45ab-abd3-56446f8d42ed"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnamet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mettrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_glu_L_e" metaid="_80df0d73-fb34-4b1b-b43b-cb5a2bc7c012" name="R_EX_glu_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_80df0d73-fb34-4b1b-b43b-cb5a2bc7c012"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUCYS" metaid="_82876c4f-119d-442e-8003-fd0b8b8c557f" name="gamma_glutamylcysteine_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003340</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_82876c4f-119d-442e-8003-fd0b8b8c557f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glucys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRAMPC" metaid="e5b61c92-a688-4271-af80-91f6cc7df401" name="phosphoribosyl_AMP_cyclohydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020260</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 3.5.4.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e5b61c92-a688-4271-af80-91f6cc7df401"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_prbamp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_prfp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_VALtex" metaid="_0813fcbe-e60c-4afd-ab14-2197c512b3a7" name="L_valine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0813fcbe-e60c-4afd-ab14-2197c512b3a7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_val_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_val_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE141abcpp" metaid="d06025bc-2fe5-4f60-9f7f-554494955a65" name="phosphatidylethanolamine_transport_via_ABC_system__n_C14_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d06025bc-2fe5-4f60-9f7f-554494955a65"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pe141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe141_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_MEOH" metaid="_103d41e9-a0d8-48d4-998c-2885cb732810" name="R_DM_MEOH" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_103d41e9-a0d8-48d4-998c-2885cb732810"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_meoh_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CU2tex" metaid="c67872a0-b10c-4820-85dc-1079bd7171f9" name="copper__Cu_2__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c67872a0-b10c-4820-85dc-1079bd7171f9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cu2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cu2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYC3Ptex" metaid="_24207fcd-c1e8-4a47-9993-82ceb08ce6a3" name="sn_Glycerol_3_phosphate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24207fcd-c1e8-4a47-9993-82ceb08ce6a3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc3p_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SELGTHR" metaid="e1e2fe01-c3b9-4fa2-9d8c-63d260a5f5df" name="R_SELGTHR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e1e2fe01-c3b9-4fa2-9d8c-63d260a5f5df"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_slnt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_dgslnt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DXPS" metaid="_92a20d90-2d2e-469d-80f1-b4ef7ed6ae3a" name="1_deoxy_D_xylulose_5_phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020600</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.2.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_92a20d90-2d2e-469d-80f1-b4ef7ed6ae3a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020600"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DMPO_LACCASE" metaid="f394e9de-d142-4627-8a3e-83ae22843555" name="Dimethoxyphenol_oxidase_laccase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013090</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.10.3.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f394e9de-d142-4627-8a3e-83ae22843555"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.10.3.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013090"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dmoxpol_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tmoxdpq_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLTGY2pp" metaid="c93308b1-aad3-402b-a862-11afbb3fc3fd" name="murein_lytic_transglycosylase__murein4p3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_003940 ) OR ( XFCFBP8418_019770 )</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c93308b1-aad3-402b-a862-11afbb3fc3fd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019770"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4p3p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD160" metaid="_5ca3fed7-9650-46a3-b5f9-3d2379ccfba2" name="Phosphatidylserine_decarboxylase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ca3fed7-9650-46a3-b5f9-3d2379ccfba2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD60" metaid="_2f4d3818-add9-4c52-bc66-934853d16392" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C6_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2f4d3818-add9-4c52-bc66-934853d16392"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hhexACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thex2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_QULNS" metaid="_89adc41d-91eb-4b1f-9627-6c8c241e29f7" name="quinolinate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000540</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.72</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_89adc41d-91eb-4b1f-9627-6c8c241e29f7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.72"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iasp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_quln_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NADH16pp" metaid="_981fc70e-7cb2-49e3-a7b4-5f8349994de4" name="NADH_dehydrogenase__ubiquinone_8___3_protons___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025600 AND XFCFBP8418_025610 AND XFCFBP8418_025620 AND XFCFBP8418_025630 AND XFCFBP8418_025640 AND XFCFBP8418_025650 AND XFCFBP8418_025660 AND XFCFBP8418_025670 AND XFCFBP8418_025680 AND XFCFBP8418_025690 AND XFCFBP8418_025700 AND XFCFBP8418_025720 AND XFCFBP8418_025730</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 1.6.5.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_981fc70e-7cb2-49e3-a7b4-5f8349994de4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.6.5.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025700"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025600"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025650"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025660"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025610"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025620"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025730"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025640"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BHEXAMD" metaid="_1b6f2247-9e71-47cc-b8ad-f4b0ece10040" name="Beta_hexosaminidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_001510 ) OR ( XFCFBP8418_021350 )</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.52</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1b6f2247-9e71-47cc-b8ad-f4b0ece10040"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.52"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021350"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acgam_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MCITL2" metaid="_9ea3f7d5-e2ae-4c22-bad9-07e33c547b13" name="methylisocitrate_lyase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022790</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.1.3.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ea3f7d5-e2ae-4c22-bad9-07e33c547b13"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_micit_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PEtex" metaid="_2a13a352-80f4-40cc-8e34-d8de3874af53" name="glycero_3_phosphoethanolamine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2a13a352-80f4-40cc-8e34-d8de3874af53"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3pe_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3pe_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPK" metaid="_0f92d4f9-8ea4-4a3d-a6b8-2dbc86ec5f98" name="aspartate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020380</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 2.7.2.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0f92d4f9-8ea4-4a3d-a6b8-2dbc86ec5f98"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.2.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4pasp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD161" metaid="c09709b6-e435-448f-8a39-24621fed6636" name="Phosphatidylserine_decarboxylase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c09709b6-e435-448f-8a39-24621fed6636"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AKGt2rtex" metaid="adebd6ac-199d-4bb3-806c-78c44400a694" name="R_AKGt2rtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#adebd6ac-199d-4bb3-806c-78c44400a694"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_akg_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDEP4pp" metaid="_432105e1-fc64-4ad2-accf-a32b00339618" name="murein_D_D_endopeptidase__murein4px4px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_432105e1-fc64-4ad2-accf-a32b00339618"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein4px4px4p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4px4p4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G1PTT" metaid="_82e3a877-0072-405f-96d7-b5b8aee32c62" name="glucose_1_phosphate_thymidylyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026240</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.24</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_82e3a877-0072-405f-96d7-b5b8aee32c62"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.24"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dttp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dtdpglu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP120abcpp" metaid="_95955cb8-0c3d-4efc-b5d3-d271056c82c2" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C12_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_95955cb8-0c3d-4efc-b5d3-d271056c82c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp120_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPS" metaid="bf5b3eb0-b23b-46c6-93dd-4e37adc2cbb2" name="phosphoenolpyruvate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022440</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 2.7.9.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bf5b3eb0-b23b-46c6-93dd-4e37adc2cbb2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.9.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_2MAHMP" metaid="_0d3bc6e1-faff-4cdc-98ef-b3db11a2d1fe" name="2_Methyl_4_amino_5_hydroxymethylpyrimidine_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003250</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0d3bc6e1-faff-4cdc-98ef-b3db11a2d1fe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2mahmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ampm_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SULtex" metaid="d9cb977b-1ed7-46f2-880c-4b9e492145be" name="R_SULtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d9cb977b-1ed7-46f2-880c-4b9e492145be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_so4_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_so4_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPM" metaid="_3d261807-574e-441f-8141-b58af7afcbd4" name="R_PPM" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026200</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 5.4.2.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d261807-574e-441f-8141-b58af7afcbd4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_r1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ORNtpp" metaid="_97b03bc1-d9f6-42f5-9213-cbc5a80501c9" name="R_ORNtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007710</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97b03bc1-d9f6-42f5-9213-cbc5a80501c9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orn_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLCptspp" metaid="a5036fe0-e602-4b03-8a02-61ed7ee43202" name="R_GLCptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a5036fe0-e602-4b03-8a02-61ed7ee43202"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glc_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_URA_e" metaid="fd91adc6-3242-4c4f-873b-895cc743cf86" name="R_EX_URA_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fd91adc6-3242-4c4f-873b-895cc743cf86"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_ura_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_USHDXF" metaid="e9865075-87c4-4211-acd9-1e784b54ed83" name="R_USHDXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012350</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.1.2.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e9865075-87c4-4211-acd9-1e784b54ed83"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_u23ga_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_lipidX_XF_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASR" metaid="_6bb0e45a-0673-4f17-8b22-2d9261e8b641" name="R_ASR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_015110</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6bb0e45a-0673-4f17-8b22-2d9261e8b641"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015110"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_aso4_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_aso3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPBNGS" metaid="_202ef9f6-693d-4498-add8-ed21231eea8b" name="porphobilinogen_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019180</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.24</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_202ef9f6-693d-4498-add8-ed21231eea8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.24"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5aop_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppbng_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM3PApp" metaid="_25b1fdbc-6f3b-48a0-8511-cb128926cb1d" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide_amidase__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011590</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 3.5.1.28</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_25b1fdbc-6f3b-48a0-8511-cb128926cb1d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.28"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm3p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdap_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYC3Pabc" metaid="_28e0eb51-089b-40cc-b17e-e2a1f37062ae" name="R_GLYC3Pabc" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28e0eb51-089b-40cc-b17e-e2a1f37062ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACOAR" metaid="a31cc524-015e-4a3a-81b5-41ae0b05130c" name="acetoacetyl_CoA_reductase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025580</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.1.1.36</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a31cc524-015e-4a3a-81b5-41ae0b05130c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.36"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025580"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_aacoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_r3hbcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAAD" metaid="_49d1cf96-0b01-4869-91d6-edc4d3d3de31" name="D_Amino_acid_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010710</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 1.4.99.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49d1cf96-0b01-4869-91d6-edc4d3d3de31"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.99.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARD" metaid="d312bee4-2cbd-42d8-9bae-17ee32fee20c" name="R_ARD" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020240</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 1.13.11.53</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d312bee4-2cbd-42d8-9bae-17ee32fee20c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.53"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhmtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_mtpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA180abcpp" metaid="_5091b6e2-ef92-4479-8b11-9e1d4b778674" name="phosphatidate_transport_via_ABC_system__n_C18_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5091b6e2-ef92-4479-8b11-9e1d4b778674"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa180_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD80" metaid="_77926968-2528-4de7-9b9f-0f7c44626c73" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C8_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_77926968-2528-4de7-9b9f-0f7c44626c73"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hoctACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_toct2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP120pp" metaid="_6a689f43-ecf3-4264-b0e7-b714b4d7c095" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6a689f43-ecf3-4264-b0e7-b714b4d7c095"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp120_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg120_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYCtpp" metaid="f2bf7fbc-77d4-4531-aea8-6f578ae146df" name="glycerol_transport_via_channel__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020710</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f2bf7fbc-77d4-4531-aea8-6f578ae146df"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLNTRS" metaid="_49002df7-93bb-449e-b598-c830b9a5a437" name="Glutaminyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004140</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49002df7-93bb-449e-b598-c830b9a5a437"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004140"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnagln_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glntrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDP4KPS" metaid="a8dc7f00-c76a-4ac1-bc13-be9336ed82eb" name="UDP_4_keto_pentose_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020820</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.35</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a8dc7f00-c76a-4ac1-bc13-be9336ed82eb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.35"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpglcur_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp4kp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASNN" metaid="_4fbdee0a-5742-4787-a3e1-55709a4b4a7a" name="L_asparaginase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024050</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 3.5.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4fbdee0a-5742-4787-a3e1-55709a4b4a7a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_asn_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR40" metaid="_117d8d3d-f0b7-4778-91dd-c9a830f0490b" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C4_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_117d8d3d-f0b7-4778-91dd-c9a830f0490b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_actACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3haACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACOCMT" metaid="_66369825-8159-41b0-aef5-5421b139c375" name="R_ACOCMT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025290</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 2.1.3.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_66369825-8159-41b0-aef5-5421b139c375"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.3.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025290"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acorn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cbp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_accitr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOAT2XF" metaid="f302aa33-53e3-478f-adb3-5467cf4fb26a" name="R_MOAT2XF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015030</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.4.99.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f302aa33-53e3-478f-adb3-5467cf4fb26a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.99.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ckdo_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdolipid4_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipid4_XF_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPA" metaid="_5a29b271-98c0-4cfd-910c-c667f06ba935" name="inorganic_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_010630 ) OR ( XFCFBP8418_012360 ) OR ( XFCFBP8418_019680 )</p> + <p>SUBSYSTEM: Anaplerotic_Reactions</p> + <p>EC_NUMBER: 3.6.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5a29b271-98c0-4cfd-910c-c667f06ba935"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012360"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD140" metaid="_01dad332-1a3c-4153-8df5-b37ea27b2473" name="Phosphatidylserine_decarboxylase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01dad332-1a3c-4153-8df5-b37ea27b2473"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ps140_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TRPS3r" metaid="_60f46c0e-3148-4c43-8d24-e134cba85758" name="R_TRPS3r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003820 AND XFCFBP8418_003830</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_60f46c0e-3148-4c43-8d24-e134cba85758"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003830"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003820"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3ig3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_indole_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IPPS" metaid="_08649866-a11a-42f5-9c63-bc67e65b4fce" name="2_isopropylmalate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017930</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.3.3.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_08649866-a11a-42f5-9c63-bc67e65b4fce"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.3.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3mob_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3c3hmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLNS" metaid="bccbebed-11f0-42cd-a1d9-24cdac9ca01d" name="glutamine_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017710</p> + <p>SUBSYSTEM: Glutamate_Metabolism_</p> + <p>EC_NUMBER: 6.3.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bccbebed-11f0-42cd-a1d9-24cdac9ca01d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHTNA2" metaid="a33b4b51-cc6e-451d-8e71-4a5283381588" name="R_CHTNA2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010730</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a33b4b51-cc6e-451d-8e71-4a5283381588"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010730"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chitin_polymer_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_e" stoichiometry="49"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_chtbs_e" stoichiometry="50"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD141" metaid="_4e296aea-508c-400f-8105-5b544b9797ba" name="Phosphatidylserine_decarboxylase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4e296aea-508c-400f-8105-5b544b9797ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LYSabcpp" metaid="_051d2f7e-278f-4b19-81f8-746cc4f031ae" name="L_lysine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_051d2f7e-278f-4b19-81f8-746cc4f031ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lys_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_DAD_5" metaid="_49f56dfb-077f-4510-8638-b0fce0a1f7e3" name="R_DM_DAD_5" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49f56dfb-077f-4510-8638-b0fce0a1f7e3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dad_5_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_FOR" metaid="_2c90897c-1dc2-4313-847b-b063fec53fee" name="R_DM_FOR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2c90897c-1dc2-4313-847b-b063fec53fee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_for_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KARA1" metaid="b0cfc4f4-6093-446d-9500-4a3e2fc3316b" name="ketol_acid_reductoisomerase__2_3_dihydroxy_3_methylbutanoate_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017890</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.86</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b0cfc4f4-6093-446d-9500-4a3e2fc3316b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.86"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_23dhmb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_alac_S_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_4PCPpp" metaid="_7c20c035-8866-4746-b496-301120428604" name="R_4PCPpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7c20c035-8866-4746-b496-301120428604"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdapDala_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_LalaDgluMdap_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NAabcO" metaid="_90b16213-e7d2-411d-b1ed-0013b8613160" name="R_NAabcO" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021120 AND XFCFBP8418_021130</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_90b16213-e7d2-411d-b1ed-0013b8613160"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021130"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_na1_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_2KMBT" metaid="f1a1c730-db43-4466-a772-458b812137cd" name="R_2KMBT" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005040</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f1a1c730-db43-4466-a772-458b812137cd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005040"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2kmb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ogm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPTA" metaid="e95b15cd-248a-4abb-a36f-35144913809a" name="aspartate_aminotransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014480</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 2.6.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e95b15cd-248a-4abb-a36f-35144913809a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PAPSR" metaid="_94d10b09-024a-445a-8d66-a125d9fb50c2" name="R_PAPSR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_002720 ) OR ( XFCFBP8418_002720 AND XFCFBP8418_013260 )</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 1.8.4.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94d10b09-024a-445a-8d66-a125d9fb50c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002720"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_paps_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MI1PP" metaid="_0d316631-0afb-4f33-b35e-c64235d6181e" name="myo_inositol_1_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005240</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.3.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0d316631-0afb-4f33-b35e-c64235d6181e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mi1p_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_inost_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRtex" metaid="_539d49b0-6c42-4f0d-a4db-99cd9e9170ec" name="L_threonine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_539d49b0-6c42-4f0d-a4db-99cd9e9170ec"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thr_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_thr_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTPDPK" metaid="ad8b408e-94ae-44ef-9198-2abaf8be91de" name="GTP_diphosphokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004340</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.6.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ad8b408e-94ae-44ef-9198-2abaf8be91de"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.6.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdptp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IPDPS" metaid="ec6cff5d-8296-47ac-8a91-e527cab00288" name="1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_reductase__ipdp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004660</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.17.7.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ec6cff5d-8296-47ac-8a91-e527cab00288"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.7.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004660"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2mb4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ipdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THZPSN3" metaid="_79d778ee-f268-475b-904d-75de8270c000" name="R_THZPSN3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011380</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.8.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79d778ee-f268-475b-904d-75de8270c000"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhgly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iscssh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_iscs_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4mpetz_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGDC" metaid="fa70a149-fa80-4865-a57a-8ec9bf0cab35" name="arginine_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015380</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 4.1.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fa70a149-fa80-4865-a57a-8ec9bf0cab35"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_agm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CPH4S" metaid="a3fa9d7a-5460-4c20-ad12-9d3ba1c2f250" name="6_carboxy_5_6_7_8_tetrahydropterin_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015860</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.2.50</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a3fa9d7a-5460-4c20-ad12-9d3ba1c2f250"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.50"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015860"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ahdt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acald_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cph4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FGLU" metaid="_81c035f4-7607-4bb9-b2c0-a35fed0105e0" name="formimidoylglutamase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 3.5.3.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_81c035f4-7607-4bb9-b2c0-a35fed0105e0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.3.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_forglu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_frmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYTRS" metaid="_7606a995-7800-4ec6-abe8-9acad743b6ef" name="Glycyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000870 AND XFCFBP8418_000880</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7606a995-7800-4ec6-abe8-9acad743b6ef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000880"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000870"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnagly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glytrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FEENTERtonex" metaid="_12a36d85-5cbd-4a3e-b15f-500bd8fa2600" name="R_FEENTERtonex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_014300 ) OR ( No_Assignment AND XFCFBP8418_014310 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_12a36d85-5cbd-4a3e-b15f-500bd8fa2600"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014300"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014310"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_feenter_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_feenter_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MALS" metaid="_91b2e54f-265a-45e4-a8de-d215e3c74426" name="malate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Anaplerotic_Reactions</p> + <p>EC_NUMBER: 2.3.3.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_91b2e54f-265a-45e4-a8de-d215e3c74426"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.3.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glx_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mal_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_14GLUCANabcpp" metaid="c89c8704-8b34-431c-a0b6-f45ed6f5893b" name="R_14GLUCANabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND No_Assignment2 AND XFCFBP8418_004950 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c89c8704-8b34-431c-a0b6-f45ed6f5893b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment2"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004950"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_14aglucan_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_14aglucan_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FRUtex" metaid="d305996b-e7c1-40e5-bfa7-0ae4b7bf8e4a" name="D_fructose_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d305996b-e7c1-40e5-bfa7-0ae4b7bf8e4a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fru_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fru_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BTS5" metaid="d6e0e695-c2ba-4aa1-b31c-6a06dfa60da2" name="Biotin_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014650</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.8.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d6e0e695-c2ba-4aa1-b31c-6a06dfa60da2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dtbt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2fe2s_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dad_5_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_btn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2fe1s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDCPDPpp" metaid="edf59a77-9d26-46f1-ab8e-1da894ac3f51" name="undecaprenyl_diphosphatase__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017720</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.6.1.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#edf59a77-9d26-46f1-ab8e-1da894ac3f51"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpdp_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_udcpp_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MTRI" metaid="_6fb97570-f876-42d0-87aa-3dd19fb12fc0" name="R_MTRI" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012050</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 5.3.1.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6fb97570-f876-42d0-87aa-3dd19fb12fc0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5mdr1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5mdru1p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Niabcpp" metaid="_6d7bcd38-06ed-4a02-83d8-9a04a3cdf12b" name="R_Niabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 3.6.3.24</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6d7bcd38-06ed-4a02-83d8-9a04a3cdf12b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.24"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ni2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ni2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDEP1pp" metaid="_2ee3178f-cd5c-46ed-957e-64b4d013309c" name="murein_L_D_endopeptidase__murein3px3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2ee3178f-cd5c-46ed-957e-64b4d013309c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein3px3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein3p3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THDPS" metaid="_4c9752db-6ac6-41d6-ac69-c036ee50633f" name="tetrahydrodipicolinate_succinylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015100</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 2.3.1.117</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4c9752db-6ac6-41d6-ac69-c036ee50633f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.117"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_succoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_sl2a6o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR60" metaid="_161e1c42-26df-4803-9482-c44d8809627b" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C6_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_161e1c42-26df-4803-9482-c44d8809627b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ohexACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hhexACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KARA2" metaid="_7137640b-08fb-4d48-a493-848e538f96e4" name="ketol_acid_reductoisomerase__2_Acetolactate_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017890</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.86</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7137640b-08fb-4d48-a493-848e538f96e4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.86"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ahbut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_23dhmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL60t2pp" metaid="_8114a03e-0693-4d24-b01b-0073a5bdf075" name="fatty_acid_CoA_ligase__hexanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8114a03e-0693-4d24-b01b-0073a5bdf075"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hxa_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hxcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_14GLUCANtex" metaid="_6fad67d1-09ba-4d18-95e0-5bf1cc1498b7" name="R_14GLUCANtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6fad67d1-09ba-4d18-95e0-5bf1cc1498b7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_14aglucan_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_14aglucan_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD120" metaid="_76125732-dfb4-4bed-a454-8c2ed827159b" name="Phosphatidylserine_decarboxylase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76125732-dfb4-4bed-a454-8c2ed827159b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps120_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe120_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CD2t3pp" metaid="_6a6be6f5-942a-4c62-acf5-19dfca4f0912" name="cadmium__Cd_2__transport_out_via_proton_antiport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010570</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6a6be6f5-942a-4c62-acf5-19dfca4f0912"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cd2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cd2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TRPTRS" metaid="_40319eaf-9e30-43a6-8522-e4712915748d" name="Tryptophanyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007540</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_40319eaf-9e30-43a6-8522-e4712915748d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnatrp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trp_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trptrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INSTtex" metaid="cdc4a2be-7fbd-47c8-bbc2-eee17a32869f" name="inositol_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cdc4a2be-7fbd-47c8-bbc2-eee17a32869f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_inost_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_inost_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPT" metaid="ac1bd227-b716-4bab-8df7-0a75519b747f" name="R_ASPT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002100</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 4.3.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac1bd227-b716-4bab-8df7-0a75519b747f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SERTRS" metaid="f804cee3-3765-4d25-9e4a-ea4f4f6cadb3" name="Seryl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020870</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f804cee3-3765-4d25-9e4a-ea4f4f6cadb3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaser_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sertrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGCDr" metaid="e85307f9-e4f6-4d24-9b95-facdb10b26c3" name="phosphoglycerate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020190</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.95</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e85307f9-e4f6-4d24-9b95-facdb10b26c3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.95"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020190"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3pg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3php_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NOVBCNtpp" metaid="_5ca19ded-359b-4743-946b-f3d0123a11cc" name="Novobiocin_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ca19ded-359b-4743-946b-f3d0123a11cc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_novbcn_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_novbcn_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROTRS" metaid="_38f0455e-f7aa-40da-b02b-4a5a0eef5801" name="Prolyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007370</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_38f0455e-f7aa-40da-b02b-4a5a0eef5801"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnapro_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_protrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DUTPDP" metaid="_33f29952-a3e2-4221-b99e-dd06006a5693" name="dUTP_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015440</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_33f29952-a3e2-4221-b99e-dd06006a5693"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dutp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDRPDr" metaid="_3db595ad-5b6f-402f-b8aa-1e235cb8fd82" name="R_MDRPDr" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020230</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 4.2.1.109</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3db595ad-5b6f-402f-b8aa-1e235cb8fd82"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.109"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020230"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5mdru1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dkmpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD40" metaid="_37eaf0db-57f8-422f-922e-522d13770c11" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C4_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_37eaf0db-57f8-422f-922e-522d13770c11"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3haACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_but2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADSK" metaid="_85d5b406-f57f-4a73-a44b-6d017b59b2cf" name="adenylyl_sulfate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002680</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 2.7.1.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_85d5b406-f57f-4a73-a44b-6d017b59b2cf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_aps_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_paps_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS120pp" metaid="ffa558f1-d74d-4319-8b63-06f62ee79683" name="cardiolipin_synthase__periplasmic__n_C12_0_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ffa558f1-d74d-4319-8b63-06f62ee79683"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg120_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_clpn120_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MCTP2App" metaid="dd16bec1-cf8a-4c14-bab2-2885cf18c2f2" name="murein_crosslinking_transpeptidase_1A__A2pm__D_ala___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004370 ) OR ( XFCFBP8418_008630 ) OR ( XFCFBP8418_010420 ) OR ( XFCFBP8418_011310 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dd16bec1-cf8a-4c14-bab2-2885cf18c2f2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004370"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011310"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p5p5p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="2"/> + <speciesReference constant="true" species="M_murein5px4px4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NOtex" metaid="_126d4486-6fa6-4692-86ce-1a5e2e9b50cb" name="nitric_oxide_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_126d4486-6fa6-4692-86ce-1a5e2e9b50cb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_no_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_no_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Mntex" metaid="_9278d2b5-4c10-4130-b169-9dbfd6a40161" name="R_Mntex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9278d2b5-4c10-4130-b169-9dbfd6a40161"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mn2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mn2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADSS" metaid="df3e285e-9030-481d-8b06-a7ffb62ea79f" name="adenylosuccinate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007280</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#df3e285e-9030-481d-8b06-a7ffb62ea79f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007280"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dcamp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPt2_2pp" metaid="_0cc2f9de-5d1d-4e44-ad6b-89dda6af0c75" name="R_ASPt2_2pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025480</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0cc2f9de-5d1d-4e44-ad6b-89dda6af0c75"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + <speciesReference constant="true" species="M_asp_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALATA_L" metaid="f85ea233-7154-4528-9ab6-5937dd7ca44a" name="L_alanine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004540</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 2.6.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f85ea233-7154-4528-9ab6-5937dd7ca44a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DADK" metaid="_235f4e1e-11ac-4a32-a0a9-c87385ecabab" name="deoxyadenylate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026070</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_235f4e1e-11ac-4a32-a0a9-c87385ecabab"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_damp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dadp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SOTA" metaid="b07c5ae3-e117-4a7c-814f-c83d7c3e8d21" name="R_SOTA" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003360</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.6.1.81</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b07c5ae3-e117-4a7c-814f-c83d7c3e8d21"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.81"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_sucorn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sucgsa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOHMT" metaid="_30aa2606-8808-4ee6-b4d3-e1953050bd8d" name="3_methyl_2_oxobutanoate_hydroxymethyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026560</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.2.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_30aa2606-8808-4ee6-b4d3-e1953050bd8d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026560"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3mob_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2dhp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ABUTtex" metaid="_19670ffc-772f-4621-82ba-26b98dad7052" name="4_aminobutyrate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_19670ffc-772f-4621-82ba-26b98dad7052"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4abut_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4abut_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGDC_r" metaid="eec6cf3f-516d-4536-ad2a-73e98b8c0ef7" name="R_AGDC_r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003030</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.5.1.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eec6cf3f-516d-4536-ad2a-73e98b8c0ef7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gam6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DDCAtex" metaid="a4794958-bba0-4dc7-a430-957e7a1309f8" name="Fatty_acid__dodecanoate__transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a4794958-bba0-4dc7-a430-957e7a1309f8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ddca_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ddca_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAGAATXF" metaid="_92feb24f-ded7-468f-8410-4bc2fc8122be" name="R_UAGAATXF" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024900</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.129</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_92feb24f-ded7-468f-8410-4bc2fc8122be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.129"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uacgam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hdecACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_u3aga_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYALDtex" metaid="baa6d16a-533f-48ab-bb79-4bf53824fedf" name="R_GLYALDtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#baa6d16a-533f-48ab-bb79-4bf53824fedf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyald_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyald_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTP10" metaid="_251cd69f-59b0-4bbf-b9f8-66c81ff22528" name="R_NTP10" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006890</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_251cd69f-59b0-4bbf-b9f8-66c81ff22528"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_itp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_idp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RPI" metaid="_84ca884c-785c-4589-85e2-e29eef61eec5" name="ribose_5_phosphate_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001410</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 5.3.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_84ca884c-785c-4589-85e2-e29eef61eec5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001410"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ru5p_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PCabcpp" metaid="d99d80ac-fea2-4614-8aaa-d22c5dd79db6" name="sn_glycerol_3_phosphocholine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d99d80ac-fea2-4614-8aaa-d22c5dd79db6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DSBDR" metaid="_442b5b18-fb55-4449-85d6-4a8667c22950" name="DsbD_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_006350 ) OR ( XFCFBP8418_006350 AND XFCFBP8418_013260 )</p> + <p>SUBSYSTEM: Electron_transfer</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_442b5b18-fb55-4449-85d6-4a8667c22950"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006350"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006350"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbdox_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbdrd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_VALabcpp" metaid="_4d8072c0-c917-4e4e-a984-3634d31f3449" name="L_valine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4d8072c0-c917-4e4e-a984-3634d31f3449"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_val_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_val_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RPE" metaid="ff31b7d8-2c37-4322-b512-edbde18d8a5e" name="ribulose_5_phosphate_3_epimerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026760</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 5.1.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ff31b7d8-2c37-4322-b512-edbde18d8a5e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026760"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ru5p_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xu5p_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ANS" metaid="_32366fd1-5082-48d5-9646-3b28a7410c5b" name="anthranilate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000460 AND XFCFBP8418_026730</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_32366fd1-5082-48d5-9646-3b28a7410c5b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026730"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_chor_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anth_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RBP4E" metaid="_5779744d-e37e-46e1-9e95-8626d440d7cd" name="R_RBP4E" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5779744d-e37e-46e1-9e95-8626d440d7cd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ru5p_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xu5p_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASNS1" metaid="_7696c780-6ae3-4c99-bea7-10c42051dcf3" name="asparagine_synthase__glutamine_hydrolysing_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015130</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 6.3.5.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7696c780-6ae3-4c99-bea7-10c42051dcf3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.5.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_asn_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METAT" metaid="_1a1c7d09-cd76-4de7-9a5d-34f2985e9750" name="methionine_adenosyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007840</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 2.5.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1a1c7d09-cd76-4de7-9a5d-34f2985e9750"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR80" metaid="_678394b3-e582-47f4-8c48-c9f82945157a" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C8_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_678394b3-e582-47f4-8c48-c9f82945157a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ooctACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hoctACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOATXF" metaid="_799bdd79-bad4-4a86-bf82-e735bb863477" name="R_MOATXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015030</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.4.99.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_799bdd79-bad4-4a86-bf82-e735bb863477"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.99.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ckdo_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lipidA_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdolipid4_XF_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PCtex" metaid="_0ca2baad-8ff8-4b02-ba9a-e729b34adff4" name="glycero_3_phosphocholine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ca2baad-8ff8-4b02-ba9a-e729b34adff4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3pc_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3pc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MINCYCtpp" metaid="_727f254d-6d71-41dc-bc05-174f23061000" name="Minocycline_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_727f254d-6d71-41dc-bc05-174f23061000"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mincyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mincyc_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IPMDr" metaid="b277d274-82b8-4a71-93f9-cdcfa5c407cf" name="3_isopropylmalate_dehydrogenase_reversible" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021500</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.85</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b277d274-82b8-4a71-93f9-cdcfa5c407cf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.85"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021500"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3c2hmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3c4mop_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SBPA" metaid="_48b9cc5a-09a5-43de-b499-b30b85b199b8" name="R_SBPA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011030</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_48b9cc5a-09a5-43de-b499-b30b85b199b8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_s17bp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_e4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FBP" metaid="_95eaacc1-00ea-4f90-8f6f-8f850fed1a29" name="fructose_bisphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_95eaacc1-00ea-4f90-8f6f-8f850fed1a29"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AOXSr2" metaid="_9400c890-2a59-4627-8ad7-0b5bd92d25c9" name="8_amino_7_oxononanoate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004000</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.47</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9400c890-2a59-4627-8ad7-0b5bd92d25c9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.47"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004000"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pimACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_8aonn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ORNtex" metaid="_30d623cd-3157-42a3-857b-b4161c1f0c44" name="ornithine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007710</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_30d623cd-3157-42a3-857b-b4161c1f0c44"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orn_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orn_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PIuabcpp" metaid="_7758ea08-9ec7-40bd-80df-08c4841b230d" name="phosphate_transport_via_ABC_system__uptake__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019420 AND XFCFBP8418_019430 AND XFCFBP8418_019440 AND XFCFBP8418_019450</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7758ea08-9ec7-40bd-80df-08c4841b230d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019430"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019440"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019450"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HSTPTr" metaid="_9e184f17-f727-4bc1-b67b-703973f1bb91" name="histidinol_phosphate_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020310</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9e184f17-f727-4bc1-b67b-703973f1bb91"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020310"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imacp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hisp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SERTRS2" metaid="d1db8a88-2e24-4a99-bfa5-e80896799f4d" name="Seryl_tRNA_synthetase__selenocystein_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020870</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d1db8a88-2e24-4a99-bfa5-e80896799f4d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnasecys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sertrna_sec_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_O2tex" metaid="c3700227-200a-4301-b3ac-fe1269c357f5" name="oxygen_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c3700227-200a-4301-b3ac-fe1269c357f5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_o2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUTRS" metaid="b8637038-f275-43b8-aa77-1e32c48fd80a" name="Glutamyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011070</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b8637038-f275-43b8-aa77-1e32c48fd80a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaglu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glutrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUTRR" metaid="_6633a907-f3e1-4193-98fb-693bd2edb998" name="glutamyl_tRNA_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012920</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 1.2.1.70</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6633a907-f3e1-4193-98fb-693bd2edb998"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.70"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012920"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glutrna_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu1sa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaglu_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FADRx2" metaid="_1a31ffcd-1cd7-4991-ac9c-75f24efdafd8" name="R_FADRx2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002700 AND XFCFBP8418_002710</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.5.1.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1a31ffcd-1cd7-4991-ac9c-75f24efdafd8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002710"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002700"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AKGt2rpp" metaid="_56babd7d-178d-4e30-bbe7-37be8f99c75c" name="2_oxoglutarate_reversible_transport_via_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014890</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_56babd7d-178d-4e30-bbe7-37be8f99c75c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDCP4pp" metaid="_4f680622-675b-4d0b-befc-1ac754cc150a" name="murein_D_D_carboxypeptidase__murein5p4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_018620 ) OR ( XFCFBP8418_020420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.16.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4f680622-675b-4d0b-befc-1ac754cc150a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4p4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_GCALD" metaid="c82549a2-429a-4622-b277-a2d927e5780d" name="R_DM_GCALD" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c82549a2-429a-4622-b277-a2d927e5780d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gcald_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OCDCEAtexi" metaid="_308a73d2-096d-4b14-be3e-96175ac517ba" name="R_OCDCEAtexi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_308a73d2-096d-4b14-be3e-96175ac517ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocdcea_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ocdcea_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CMtpp" metaid="a13b6201-035d-4799-b18e-bf3f1fa52249" name="Chloramphenicol_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a13b6201-035d-4799-b18e-bf3f1fa52249"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_cm_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cm_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PMEACPE" metaid="_68a9ebb6-f1c6-44c4-a5c8-7dcee09ae7ba" name="Pimeloyl__ACP__methyl_ester_esterase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004010</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.1.85</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_68a9ebb6-f1c6-44c4-a5c8-7dcee09ae7ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.85"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004010"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_meoh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pimACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADK1" metaid="_49cdf00d-bed3-479b-b154-c0f5fb59388e" name="adenylate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026070</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49cdf00d-bed3-479b-b154-c0f5fb59388e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP140pp" metaid="_7a8ec943-7c19-4990-a3f3-03e43ff54b22" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7a8ec943-7c19-4990-a3f3-03e43ff54b22"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp140_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg140_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GRTT" metaid="_9978b685-ed01-4b71-bb18-16a6d0e1db8b" name="geranyltranstransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005980</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9978b685-ed01-4b71-bb18-16a6d0e1db8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ipdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_frdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUCtex" metaid="_6083e642-12b7-4961-a2ab-988dc5346324" name="R_FUCtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6083e642-12b7-4961-a2ab-988dc5346324"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fuc_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fuc_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM3PH" metaid="_5bcf5dcc-ce35-4973-8e5d-a3acbefbccb7" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide_beta__1_4_N_acetylglucosaminidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021350</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5bcf5dcc-ce35-4973-8e5d-a3acbefbccb7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhm3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYOX" metaid="baa53e94-4e56-4a8a-800d-80dc093d5834" name="hydroxyacylglutathione_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019610</p> + <p>SUBSYSTEM: Methylglyoxal_degradation</p> + <p>EC_NUMBER: 3.1.2.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#baa53e94-4e56-4a8a-800d-80dc093d5834"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019610"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lgt_S_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lac_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FBA" metaid="d57285eb-dacd-4631-8872-dbaec147930d" name="fructose_bisphosphate_aldolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011030</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 4.1.2.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d57285eb-dacd-4631-8872-dbaec147930d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DOXRBCNtpp" metaid="b12b499f-3972-4815-a88a-a9317ef5d311" name="Doxorubicin_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b12b499f-3972-4815-a88a-a9317ef5d311"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_doxrbcn_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_doxrbcn_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AP4AS" metaid="e2a33de6-8ba2-4520-9b91-68d823beb82f" name="R_AP4AS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023900</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e2a33de6-8ba2-4520-9b91-68d823beb82f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ap4a_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADK3" metaid="_3c33c4b5-38c9-4e55-a928-726c79ddb1d2" name="adentylate_kinase__GTP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026070</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3c33c4b5-38c9-4e55-a928-726c79ddb1d2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACOATA" metaid="d134947b-2d61-43dc-ad87-3586854783f4" name="Acetyl_CoA_ACP_transacylase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_017940</p> + <p>SUBSYSTEM: Membrane_Lipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.38</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d134947b-2d61-43dc-ad87-3586854783f4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.38"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017940"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADK4" metaid="d80fc4ec-a1a3-48fc-b5d9-663765d5ee43" name="adentylate_kinase__ITP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026070</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d80fc4ec-a1a3-48fc-b5d9-663765d5ee43"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_itp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_idp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_APRAUR" metaid="_70c48d46-da92-46e2-baa8-b8192e76e959" name="5_amino_6__5_phosphoribosylamino_uracil_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009790</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.193</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_70c48d46-da92-46e2-baa8-b8192e76e959"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.193"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5apru_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5aprbu_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S2FE2ST" metaid="d88fa6b4-43b9-414c-84e2-b3f14db7a4c3" name="R_S2FE2ST" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950 AND XFCFBP8418_012150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d88fa6b4-43b9-414c-84e2-b3f14db7a4c3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012150"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2fe2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LPADSSXF" metaid="c6e32931-814b-41c7-a454-7f0a8ecffa84" name="R_LPADSSXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.4.1.182</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c6e32931-814b-41c7-a454-7f0a8ecffa84"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.182"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_u23ga_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lipidX_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_lipidAds_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GDPDPK" metaid="d6fbd975-bf2e-4c02-a28a-48d1ab9741ae" name="GDP_diphosphokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004340 ) OR ( XFCFBP8418_008750 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.6.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d6fbd975-bf2e-4c02-a28a-48d1ab9741ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.6.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppgpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AICART" metaid="_743b940c-dc47-4773-af74-6f8f53223744" name="phosphoribosylaminoimidazolecarboxamide_formyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001030</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 2.1.2.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_743b940c-dc47-4773-af74-6f8f53223744"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_aicar_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fprica_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S2FE2SS" metaid="df79ddf3-b54a-400f-9ed3-c4a7a1293421" name="R_S2FE2SS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950 AND XFCFBP8418_002960 AND XFCFBP8418_025330</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#df79ddf3-b54a-400f-9ed3-c4a7a1293421"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufsesh_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="7"/> + <speciesReference constant="true" species="M_sufse_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S2FE2SR" metaid="ad865030-3d0f-46b0-ae92-d51f2fe675ea" name="R_S2FE2SR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950 AND XFCFBP8418_002960 AND XFCFBP8418_025330</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ad865030-3d0f-46b0-ae92-d51f2fe675ea"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufsesh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2fe1s_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="5"/> + <speciesReference constant="true" species="M_sufse_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MECDPDH5" metaid="_3dcaee8e-0581-4fd2-a58e-36c336cea301" name="R_MECDPDH5" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012250 AND XFCFBP8418_023100</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.17.7.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3dcaee8e-0581-4fd2-a58e-36c336cea301"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.7.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012250"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023100"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2mecdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_flxr_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2mb4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_flxso_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPNDH" metaid="_4504abff-43dd-4a5c-8d7d-c99bfd5232d8" name="prephenate_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021090</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4504abff-43dd-4a5c-8d7d-c99bfd5232d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021090"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pphn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phpyr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_COBALT2t3pp" metaid="_413f9a7c-17cb-4b24-a54b-9139a7907c2c" name="cobalt__Co_2__transport_out_via_proton_antiport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010570</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_413f9a7c-17cb-4b24-a54b-9139a7907c2c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cobalt2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cobalt2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MPTG2" metaid="ea8026d5-3079-404e-ae94-de7266c66bb9" name="murein_polymerizing_transglycosylase_2__three_linked_units_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004700 AND XFCFBP8418_008630 ) OR ( XFCFBP8418_004700 AND XFCFBP8418_010420 ) OR ( XFCFBP8418_004700 AND XFCFBP8418_020460 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ea8026d5-3079-404e-ae94-de7266c66bb9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010420"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uaagmda_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein5p5p5p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GAPD" metaid="b831af11-11e9-46cd-a767-98d8e6ae317b" name="glyceraldehyde_3_phosphate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007260</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 1.2.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b831af11-11e9-46cd-a767-98d8e6ae317b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_13dpg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PYK" metaid="_043c5f9c-0c78-4d01-b3a3-8e821cd2855f" name="pyruvate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011050</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 2.7.1.40</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_043c5f9c-0c78-4d01-b3a3-8e821cd2855f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.40"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_QUIN2tex" metaid="_31c3858e-2a09-490c-83ca-e7646693cc58" name="R_QUIN2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_31c3858e-2a09-490c-83ca-e7646693cc58"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_quin_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_quin_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHTBSptspp" metaid="a7cd7347-243a-4ea4-86c6-cc55b9b7ce10" name="R_CHTBSptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a7cd7347-243a-4ea4-86c6-cc55b9b7ce10"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_chtbs6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPPGO" metaid="_3a1ca359-53dd-4137-a384-4c4aed4c2efb" name="protoporphyrinogen_oxidase__aerobic_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.3.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3a1ca359-53dd-4137-a384-4c4aed4c2efb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.3.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1.5"/> + <speciesReference constant="true" species="M_pppg9_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppp9_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSP_L" metaid="_486e5a3f-1611-4213-a1af-da0364cd412c" name="phosphoserine_phosphatase__L_serine_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 3.1.3.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_486e5a3f-1611-4213-a1af-da0364cd412c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG140abcpp" metaid="d569cf55-f1ce-4fac-a614-263236ad327b" name="phosphatidylglycerol_transport_via_ABC_system__n_C14_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d569cf55-f1ce-4fac-a614-263236ad327b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg140_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BHEXAMD_p" metaid="b1754b01-de38-4b32-909c-2c8a0bf2f851" name="R_BHEXAMD_p" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b1754b01-de38-4b32-909c-2c8a0bf2f851"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acgam_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IG3PS" metaid="_8316c47c-13b2-4967-96d9-149ef52f5e2b" name="Imidazole_glycerol_3_phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020270 AND XFCFBP8418_020290</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8316c47c-13b2-4967-96d9-149ef52f5e2b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020290"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020270"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prlp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_aicar_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_eig3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ZN2t3pp" metaid="_89074f04-5c71-4b22-87a4-e9cc5b218486" name="zinc__Zn_2__transport_out_via_proton_antiport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010570</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_89074f04-5c71-4b22-87a4-e9cc5b218486"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_zn2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_zn2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MCTP1Bpp" metaid="_43d8c899-b964-402b-8cc3-5b322c5cebdd" name="murein_crosslinking_transpeptidase_1B__A2pm__A2pm___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_008630 ) OR ( XFCFBP8418_010420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_43d8c899-b964-402b-8cc3-5b322c5cebdd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010420"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5px3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_alaala_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG181abcpp" metaid="ae101868-39b2-4394-b08d-b200e2aeacda" name="phosphatidylglycerol_transport_via_ABC_system__n_C18_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae101868-39b2-4394-b08d-b200e2aeacda"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg181_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHNPTE" metaid="_9c5a9fe1-95bb-4d1c-96ca-65e1bbf685c0" name="R_DHNPTE" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007450</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 5.1.99.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9c5a9fe1-95bb-4d1c-96ca-65e1bbf685c0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.99.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007450"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhnpt_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhmpt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HYXNtpp" metaid="_4a5f98fb-3bd4-4023-8a75-76dcf7743a8e" name="R_HYXNtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a5f98fb-3bd4-4023-8a75-76dcf7743a8e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hxan_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hxan_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_E4P" metaid="_16143a2a-81df-4625-8e0d-024f7c1d9265" name="R_DM_E4P" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_16143a2a-81df-4625-8e0d-024f7c1d9265"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_e4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ILEtex" metaid="_7fb97607-e83e-4f04-a22b-61d665599138" name="L_isoleucine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7fb97607-e83e-4f04-a22b-61d665599138"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ile_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ile_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYTK1" metaid="b35cfab3-f230-41ae-ba8f-262dcad25287" name="cytidylate_kinase__CMP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004870</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b35cfab3-f230-41ae-ba8f-262dcad25287"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOX2abcpp" metaid="_62738479-cf85-4018-aec9-41eed2607914" name="R_METSOX2abcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_62738479-cf85-4018-aec9-41eed2607914"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_metsox_R_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_metsox_R_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TRPS2" metaid="d4ee51b8-8b6e-4e04-a97f-5f9d65da4c9a" name="R_TRPS2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003820 AND XFCFBP8418_003830</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d4ee51b8-8b6e-4e04-a97f-5f9d65da4c9a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003830"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003820"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_indole_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trp_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DCTPD" metaid="_27d1f9b3-342a-4707-8c9e-b20105bc33ac" name="dCTP_deaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011560</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.5.4.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_27d1f9b3-342a-4707-8c9e-b20105bc33ac"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011560"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dutp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL140t2pp" metaid="d0a9a803-5d82-4d2a-8f86-12aad13447e7" name="fatty_acid_CoA_ligase__tetradecanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d0a9a803-5d82-4d2a-8f86-12aad13447e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttdca_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA181abcpp" metaid="_2882c2e6-f3ce-42a7-9e5b-a3a5b2a932ba" name="phosphatidate_transport_via_ABC_system__n_C18_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2882c2e6-f3ce-42a7-9e5b-a3a5b2a932ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa181_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYKr" metaid="_01d621a5-aaa8-4c78-95a3-bd1c60708a0a" name="glycerol_kinase__reversible_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020720</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01d621a5-aaa8-4c78-95a3-bd1c60708a0a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP120" metaid="_5f9dd26b-c6e9-445b-8eb1-8aec7dd5ab14" name="phosphatidylglycerol_phosphate_phosphatase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f9dd26b-c6e9-445b-8eb1-8aec7dd5ab14"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg120_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUt4pp" metaid="_719fa133-2460-4968-a297-4a346376a133" name="R_GLUt4pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000650</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_719fa133-2460-4968-a297-4a346376a133"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_na1_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GUAtpp" metaid="b9b2cd98-3901-4d60-8afc-ebd4c46d93cd" name="R_GUAtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b9b2cd98-3901-4d60-8afc-ebd4c46d93cd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gua_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gua_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NODOy" metaid="bea88a6d-157a-4674-a63a-db6fec619225" name="nitric_oxide_dioxygenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014590</p> + <p>SUBSYSTEM: Nitrogen_Metabolism</p> + <p>EC_NUMBER: 1.14.12.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bea88a6d-157a-4674-a63a-db6fec619225"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.12.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_no_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_no3_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DTMPK" metaid="_0da9684f-202c-4ba5-b34c-5a0cf61f6192" name="dTMP_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006690</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0da9684f-202c-4ba5-b34c-5a0cf61f6192"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dtmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SUCOAS" metaid="ea388af7-db37-4569-8f66-ef10468d4987" name="succinyl_CoA_synthetase__ADP_forming_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011960 AND XFCFBP8418_011970</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 6.2.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ea388af7-db37-4569-8f66-ef10468d4987"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011970"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011960"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_succoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYTK2" metaid="e66be1e9-3407-4b0b-ac83-de6a60fa30fe" name="cytidylate_kinase__dCMP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004870</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e66be1e9-3407-4b0b-ac83-de6a60fa30fe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dcmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dcdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PNTK" metaid="da5808be-1ffe-4b03-837f-0c48cf839c38" name="pantothenate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018190</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.33</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#da5808be-1ffe-4b03-837f-0c48cf839c38"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.33"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018190"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pnto_R_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ppan_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PAPPT3" metaid="c1fdd5ff-6f8e-4c9e-a65a-87170bae8b65" name="phospho_N_acetylmuramoyl_pentapeptide_transferase__meso_2_6_diaminopimelate_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011280</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.8.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c1fdd5ff-6f8e-4c9e-a65a-87170bae8b65"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011280"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ugmda_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uagmda_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HEPT1" metaid="_121569c1-aca4-4a43-a54e-7ab8a6ad28d1" name="R_HEPT1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019540</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_121569c1-aca4-4a43-a54e-7ab8a6ad28d1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_adphep_LD_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lipidA_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hlipidA_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR161tipp" metaid="abe99089-4242-4fb7-92aa-8e1384b39616" name="R_12DGR161tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#abe99089-4242-4fb7-92aa-8e1384b39616"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr161_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr161_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NNAMr" metaid="_45edd948-9a91-4a3d-ae9c-7d5a9ef1047b" name="nicotinamidase__reversible" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020780</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.5.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_45edd948-9a91-4a3d-ae9c-7d5a9ef1047b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020780"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ncam_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PD5" metaid="e0007e94-29e4-4615-90ae-66b2a8ea76f4" name="glycerol_3_phosphate_dehydrogenase__ubiquinone_8_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020700</p> + <p>SUBSYSTEM: Glycerol_Degradation</p> + <p>EC_NUMBER: 1.1.5.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e0007e94-29e4-4615-90ae-66b2a8ea76f4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.5.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020700"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTPCI" metaid="_8228c5ad-649a-49e1-be1f-4c1f6da9d41b" name="GTP_cyclohydrolase_I" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001100</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.5.4.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8228c5ad-649a-49e1-be1f-4c1f6da9d41b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahdt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HEPT3" metaid="_61f4e47d-1ec6-4b63-8e55-8290a85c1049" name="R_HEPT3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019540</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_61f4e47d-1ec6-4b63-8e55-8290a85c1049"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_adphep_LD_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phhlipidA_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hphhlipidA_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PD2" metaid="f56c2f7a-1537-4b9c-bbf8-8645b86821d8" name="glycerol_3_phosphate_dehydrogenase__NADP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018110</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.1.1.94</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f56c2f7a-1537-4b9c-bbf8-8645b86821d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.94"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018110"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NACtex" metaid="_5f683c5e-d94b-4fef-839b-3363659b8be3" name="Nicotinic_acid_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f683c5e-d94b-4fef-839b-3363659b8be3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nac_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nac_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_P5CG" metaid="_01ee6104-d3d1-4fbc-ba9e-8651bff7eb2f" name="R_P5CG" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01ee6104-d3d1-4fbc-ba9e-8651bff7eb2f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu5sa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1pyr5c_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CDGS" metaid="_297a559f-86bd-4d65-9a6d-81df9ee5d9ea" name="7_deaza_7_carboxyguanine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_016450</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.3.99.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_297a559f-86bd-4d65-9a6d-81df9ee5d9ea"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.99.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016450"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cph4_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cdg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_P5CD" metaid="bf8bce5c-5964-426a-8ddd-934248037087" name="1_pyrroline_5_carboxylate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.5.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bf8bce5c-5964-426a-8ddd-934248037087"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1pyr5c_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CDGR" metaid="b12453cd-1703-4b8e-8a28-dd0d81dc44ad" name="7_cyano_7_deazaguanine_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021550</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.7.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b12453cd-1703-4b8e-8a28-dd0d81dc44ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.7.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_preq0_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_preq1_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DGK1" metaid="_9f81734d-b4bd-41d4-8ddf-79e9695a25a9" name="deoxyguanylate_kinase__dGMP_ATP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002650</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9f81734d-b4bd-41d4-8ddf-79e9695a25a9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dgmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dgdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT120" metaid="_8fbb9223-3e34-4dca-b9f7-5d7ab75b20e5" name="R_G3PAT120" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8fbb9223-3e34-4dca-b9f7-5d7ab75b20e5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ddcaACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1ddecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PHETRS" metaid="d7ced00b-f100-410f-aaeb-4d131894d762" name="Phenylalanyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011750 AND XFCFBP8418_011760</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d7ced00b-f100-410f-aaeb-4d131894d762"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011750"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011760"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phe_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaphe_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phetrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGLYCP" metaid="b7c0d0ef-b131-43f4-8db4-e4314519c5a0" name="Phosphoglycolate_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005170</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.1.3.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b7c0d0ef-b131-43f4-8db4-e4314519c5a0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2pglyc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyclt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGtex" metaid="c0a2be14-66bf-4a69-91bb-52745a063137" name="L_arginine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c0a2be14-66bf-4a69-91bb-52745a063137"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_arg_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_arg_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAMAS" metaid="_6ebf5651-80a6-4232-ac63-3082145b32ca" name="UDP_N_acetylmuramoyl_L_alanine_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011250</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6ebf5651-80a6-4232-ac63-3082145b32ca"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uamr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uama_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADNUC" metaid="_36c795ab-3c17-4599-a6b7-1b9a0fd6f7ec" name="adenosine_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.2.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_36c795ab-3c17-4599-a6b7-1b9a0fd6f7ec"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ade_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rib_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADNt2pp" metaid="c3206781-27f3-4c37-9dc2-c78669cf6757" name="R_ADNt2pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c3206781-27f3-4c37-9dc2-c78669cf6757"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_adn_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NOtpp" metaid="_78e5aea7-2ac6-4a3c-830f-daf94491487e" name="NO_transport__diffusion_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_78e5aea7-2ac6-4a3c-830f-daf94491487e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_no_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_no_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XYLtex" metaid="fa6915be-2f49-4f71-8fcd-6aebad75ef47" name="R_XYLtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fa6915be-2f49-4f71-8fcd-6aebad75ef47"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_xyl_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xyl_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_P5CR" metaid="_158dba30-14f5-401a-b1d8-12dcb1535288" name="pyrroline_5_carboxylate_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013370</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.5.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_158dba30-14f5-401a-b1d8-12dcb1535288"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1pyr5c_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL120t2pp" metaid="_94eba020-6f77-43c1-9fe5-bb1bd7e6aad6" name="fatty_acid_CoA_ligase__dodecanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94eba020-6f77-43c1-9fe5-bb1bd7e6aad6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ddca_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ddcacoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LYSTRS" metaid="_018c56f1-8d37-413b-bb73-e5f0af6dc277" name="Lysyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023900</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_018c56f1-8d37-413b-bb73-e5f0af6dc277"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_lys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnalys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lystrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLTGY4pp" metaid="b2dfa850-588a-40c9-a419-56474c2e0f12" name="murein_lytic_transglycosylase__murein4px4p4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_003940 ) OR ( XFCFBP8418_019770 )</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b2dfa850-588a-40c9-a419-56474c2e0f12"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019770"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4px4p4p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDPGLCUR4EP" metaid="_272c6c48-7392-44f5-8b9d-7f29e040131e" name="R_UDPGLCUR4EP" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020820</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.1.3.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_272c6c48-7392-44f5-8b9d-7f29e040131e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udpglcur_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udpgalur_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PTPAT" metaid="f30e63e6-c461-4c82-be34-8bca956defa3" name="pantetheine_phosphate_adenylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025440</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f30e63e6-c461-4c82-be34-8bca956defa3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pan4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dpcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GRXR" metaid="a46ca013-5f71-401c-8638-1c1d74832e05" name="glutaredoxin_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012410</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.8.4.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a46ca013-5f71-401c-8638-1c1d74832e05"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012410"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUDxi" metaid="bc91dd32-ffce-4384-a9af-332161bfeedb" name="R_GLUDxi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001660</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 1.4.1.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bc91dd32-ffce-4384-a9af-332161bfeedb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.1.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001660"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OCBT" metaid="_5964bf74-d6e5-4ce0-93d3-c13c6acea5bc" name="ornithine_carbamoyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025290</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.1.3.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5964bf74-d6e5-4ce0-93d3-c13c6acea5bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.3.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025290"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cbp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_citr_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MEPCT" metaid="_17165073-998e-4383-8135-c93aeb2917b9" name="2_C_methyl_D_erythritol_4_phosphate_cytidylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022200</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_17165073-998e-4383-8135-c93aeb2917b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2me4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4c2me_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UM4PL" metaid="_53df3af8-acf6-4da2-bf15-451e744c9a05" name="UDP_N_acetylmuramate_L_alanyl_gamma_D_glutamyl_meso_diaminopimelate_D_alanine_ligase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026060</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 6.3.2.45</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_53df3af8-acf6-4da2-bf15-451e744c9a05"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.45"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026060"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uamr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdapDala_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_um4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP141" metaid="_73fd0d3c-0584-4c1b-948f-a56883aee2d2" name="phosphatidylglycerol_phosphate_phosphatase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_73fd0d3c-0584-4c1b-948f-a56883aee2d2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_o2_e" metaid="_646a44a4-5b92-488c-9b8e-b9fe9e3dfa92" name="R_EX_o2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_646a44a4-5b92-488c-9b8e-b9fe9e3dfa92"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_o2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADMDCr" metaid="_4822dbc6-d580-47d8-9c1c-9835a304b3e9" name="Adenosylmethionine_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002270</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 4.1.1.50</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4822dbc6-d580-47d8-9c1c-9835a304b3e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.50"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002270"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ametam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP140" metaid="e4b730ae-8294-4c36-b8a6-d0a83b9a9a82" name="phosphatidylglycerol_phosphate_phosphatase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e4b730ae-8294-4c36-b8a6-d0a83b9a9a82"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACCOACr" metaid="_9a723345-b105-440f-adb5-ccdf64f4e741" name="R_ACCOACr" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003020 AND XFCFBP8418_014550 AND XFCFBP8418_014560 AND XFCFBP8418_026800</p> + <p>SUBSYSTEM: Membrane_Lipid_Metabolism</p> + <p>EC_NUMBER: 6.4.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a723345-b105-440f-adb5-ccdf64f4e741"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.4.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026800"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014560"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003020"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014550"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hco3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_malcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ULA4NFT" metaid="_6b3c7323-6ecc-41de-ac76-774c1351a483" name="R_ULA4NFT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006440</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6b3c7323-6ecc-41de-ac76-774c1351a483"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpLa4n_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpLa4fn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_URAtex" metaid="f361a2e8-85b7-41d8-9aeb-6581c6c97fdd" name="R_URAtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f361a2e8-85b7-41d8-9aeb-6581c6c97fdd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ura_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ura_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDEP2pp" metaid="_53a270fc-b2b1-44b6-850e-cd29a6c12160" name="murein_D_D_endopeptidase__murein3px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_53a270fc-b2b1-44b6-850e-cd29a6c12160"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein3px4p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4p3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRAIS" metaid="_8aceeb76-a43c-4b0b-80c2-3932021ab547" name="phosphoribosylaminoimidazole_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006650</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8aceeb76-a43c-4b0b-80c2-3932021ab547"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fpram_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_air_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_cobalt2_e" metaid="_089057f2-9126-4ed3-9ed5-549b47a61c69" name="R_EX_cobalt2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_089057f2-9126-4ed3-9ed5-549b47a61c69"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_cobalt2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SULabcpp" metaid="eb51e90d-10c2-448b-96d2-005c175b90c1" name="sulfate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004070 AND XFCFBP8418_004080 AND XFCFBP8418_004090 AND XFCFBP8418_004100</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eb51e90d-10c2-448b-96d2-005c175b90c1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004100"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004080"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so4_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP160abcpp" metaid="_2bcff870-8734-42d6-a979-38b35526bbce" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C16_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2bcff870-8734-42d6-a979-38b35526bbce"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp160_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACALDtpp" metaid="_4c8dad63-4c56-4843-8e1b-dcd6a2151f97" name="R_ACALDtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4c8dad63-4c56-4843-8e1b-dcd6a2151f97"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acald_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acald_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSDtex" metaid="_17999d1d-0dac-4cb1-a5b1-b1cb4734d30e" name="R_CYSDtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_17999d1d-0dac-4cb1-a5b1-b1cb4734d30e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cys_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DMQMT" metaid="f192174a-4e57-4847-bd91-879239e05dbe" name="3_Dimethylubiquinonol_3_methyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005180</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.64</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f192174a-4e57-4847-bd91-879239e05dbe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.64"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2omhmbl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SPMDabcpp" metaid="c5945588-1dab-4e2e-ac23-11a842cff4b9" name="spermidine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5945588-1dab-4e2e-ac23-11a842cff4b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_spmd_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_spmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPO5" metaid="c9b32a8b-ef71-4fc9-84f2-8f381ce673cc" name="L_aspartate_oxidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000550</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c9b32a8b-ef71-4fc9-84f2-8f381ce673cc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iasp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAGCVT" metaid="d78d7c18-3e2f-4bb8-ae04-6dcad5b190d1" name="UDP_N_acetylglucosamine_1_carboxyvinyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003450</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d78d7c18-3e2f-4bb8-ae04-6dcad5b190d1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003450"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uacgam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uaccg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPO3" metaid="df514e5b-3ab3-485e-99b3-e3f85b6fb9d6" name="R_ASPO3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000550</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#df514e5b-3ab3-485e-99b3-e3f85b6fb9d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iasp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_h2o_e" metaid="_61cec249-2342-4783-8c02-2d66ef9bd2b7" name="R_EX_h2o_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_61cec249-2342-4783-8c02-2d66ef9bd2b7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MTHFR2" metaid="_152f1441-c730-4edb-8fe8-db9ebe5ffd36" name="5_10_methylenetetrahydrofolate_reductase__NADH_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023810</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: 1.5.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_152f1441-c730-4edb-8fe8-db9ebe5ffd36"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5mthf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Actex" metaid="_79c4f963-40f3-4233-8ecd-eaab21f9a788" name="R_Actex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79c4f963-40f3-4233-8ecd-eaab21f9a788"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_na1_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G1PACT" metaid="_253f3d72-ff88-4265-a00e-0c4e07886924" name="glucosamine_1_phosphate_N_acetyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023670</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.157</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_253f3d72-ff88-4265-a00e-0c4e07886924"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.157"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023670"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gam1p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam1p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2Stpp" metaid="_97e52e9f-73df-4d9e-92d4-050a7fbb8b07" name="R_H2Stpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97e52e9f-73df-4d9e-92d4-050a7fbb8b07"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2s_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2s_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS140pp" metaid="_84c0c025-1c66-4a5a-9f81-a073f398525c" name="cardiolipin_synthase__periplasmic__n_C14_0_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_84c0c025-1c66-4a5a-9f81-a073f398525c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg140_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_clpn140_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UHGADAXF" metaid="_39eef7af-9647-4237-b574-67b855d7791e" name="R_UHGADAXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011190</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.5.1.108</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_39eef7af-9647-4237-b574-67b855d7791e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.108"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011190"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_u3aga_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_u3hga_XF_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPO6" metaid="ecfae277-ee16-4d2b-8dda-a9810b0053c2" name="L_aspartate_oxidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000550</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ecfae277-ee16-4d2b-8dda-a9810b0053c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iasp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PANTS" metaid="_16d88e10-4b9d-4556-a796-6b1258ad22fa" name="pantothenate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026550</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_16d88e10-4b9d-4556-a796-6b1258ad22fa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pant_R_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_B_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pnto_R_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_co2_e" metaid="_2711df0f-e364-4cea-8eee-b6f411cdfa9e" name="R_EX_co2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2711df0f-e364-4cea-8eee-b6f411cdfa9e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_co2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSP" metaid="_4641d575-ba0f-40e8-a26d-932fb2108f61" name="R_PSP" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 3.1.3.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4641d575-ba0f-40e8-a26d-932fb2108f61"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD180" metaid="b94c0c09-7ccb-4593-b50a-9da601600d3c" name="Phosphatidylserine_decarboxylase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b94c0c09-7ccb-4593-b50a-9da601600d3c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe180_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM4PApp" metaid="_045cf426-4bf4-480a-b9dc-8320ce07417a" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_amidase__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011590</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 3.5.1.29</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_045cf426-4bf4-480a-b9dc-8320ce07417a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.29"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdapDala_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD181" metaid="a5849849-8097-47e6-9bf0-a05c53ddde4b" name="Phosphatidylserine_decarboxylase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a5849849-8097-47e6-9bf0-a05c53ddde4b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NODOx" metaid="c3fb34ba-15f5-4a90-a6b6-2d5547d91e2b" name="nitric_oxide_dioxygenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014590</p> + <p>SUBSYSTEM: Nitrogen_Metabolism</p> + <p>EC_NUMBER: 1.14.12.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c3fb34ba-15f5-4a90-a6b6-2d5547d91e2b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.12.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_no_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_no3_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2tpp" metaid="fed4783d-7b15-4b74-88bc-2fbfb4de6b6f" name="R_H2tpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fed4783d-7b15-4b74-88bc-2fbfb4de6b6f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_nh4_e" metaid="_14ff9c79-46cc-4a9b-8e19-bec5265cf89e" name="R_EX_nh4_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_14ff9c79-46cc-4a9b-8e19-bec5265cf89e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR160tipp" metaid="_9ddb6a17-a564-4404-aa8d-38886cdd19b9" name="R_12DGR160tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ddb6a17-a564-4404-aa8d-38886cdd19b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr160_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr160_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OMBZLM" metaid="_01570b3c-6b93-4c60-9833-0752ff28d461" name="2_Octaprenyl_6_methoxy_benzoquinol_methylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002810</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.201</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01570b3c-6b93-4c60-9833-0752ff28d461"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.201"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2ombzl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2ommbl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TSULabcpp" metaid="_8460b634-1a44-4244-a0ef-84ccf29747a9" name="thiosulfate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004070 AND XFCFBP8418_004080 AND XFCFBP8418_004090 AND XFCFBP8418_004100</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8460b634-1a44-4244-a0ef-84ccf29747a9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004100"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004080"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tsul_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tsul_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRTRS" metaid="b8eab933-0fa6-4c20-bedd-edae289ea018" name="Threonyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011800</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b8eab933-0fa6-4c20-bedd-edae289ea018"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnathr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thr_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thrtrna_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRAGSr" metaid="_013f4f8f-0241-4957-bada-351b1d2228a8" name="phosphoribosylglycinamide_synthase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001040</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_013f4f8f-0241-4957-bada-351b1d2228a8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001040"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pram_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gar_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP160" metaid="_2eb409c6-b02a-4490-962f-92cb2676f703" name="phosphatidylglycerol_phosphate_phosphatase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2eb409c6-b02a-4490-962f-92cb2676f703"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg160_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYStex" metaid="ab144e88-6902-4e91-ae5a-c420ed7d4cc7" name="L_cysteine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ab144e88-6902-4e91-ae5a-c420ed7d4cc7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cys_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HCO3E" metaid="c28c9d1c-57dd-419d-925b-53bc5d6054f3" name="HCO3_equilibration_reaction" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010460</p> + <p>SUBSYSTEM: Cyanate_degradation</p> + <p>EC_NUMBER: 4.2.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c28c9d1c-57dd-419d-925b-53bc5d6054f3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010460"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hco3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP161" metaid="_69083ce4-81a0-4c4a-beaa-6b65e08b2e1b" name="phosphatidylglycerol_phosphate_phosphatase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_69083ce4-81a0-4c4a-beaa-6b65e08b2e1b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TMPKr" metaid="_0198f89e-6891-4d38-bcb7-5edf188f5c07" name="thiamine_phosphate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009740</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.4.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0198f89e-6891-4d38-bcb7-5edf188f5c07"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009740"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thmmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thmpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_FRMD" metaid="ce369cc1-6ad5-4d1b-bf90-592514d09e8b" name="R_DM_FRMD" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ce369cc1-6ad5-4d1b-bf90-592514d09e8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_frmd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS9" metaid="_5bc43a5a-6127-4454-ba97-cb53be9790ed" name="R_AACPS9" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025958</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5bc43a5a-6127-4454-ba97-cb53be9790ed"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025958"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_octa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OPHBDC" metaid="_4df281e2-fe01-4f86-b3c4-59a537c52c37" name="Octaprenyl_hydroxybenzoate_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4df281e2-fe01-4f86-b3c4-59a537c52c37"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ophb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2oph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL141t2pp" metaid="_0b52d4fd-a030-47fb-99bf-0a40e19a3cb4" name="fatty_acid_CoA_ligase__tetradecenoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b52d4fd-a030-47fb-99bf-0a40e19a3cb4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttdcea_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdecoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADNtex" metaid="_5401ac99-0289-4bde-806c-67175d1ede26" name="Adenosine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5401ac99-0289-4bde-806c-67175d1ede26"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_adn_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adn_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACt2rex" metaid="c7e5b008-44fc-4774-91ff-3ac43427dd93" name="R_ACt2rex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c7e5b008-44fc-4774-91ff-3ac43427dd93"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ac_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDPG4E" metaid="_4d72f9cb-f661-4f28-9738-3104f805018d" name="UDPglucose_4_epimerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 5.1.3.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4d72f9cb-f661-4f28-9738-3104f805018d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udpgal_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP11" metaid="_39c287d2-22d6-4e29-ba3e-c41135c6196b" name="Nucleoside_triphosphate_pyrophosphorylase__xtp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002620</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_39c287d2-22d6-4e29-ba3e-c41135c6196b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP10" metaid="ac88c72c-c847-4b90-a7cf-67d2b7d7baba" name="Nucleoside_triphosphate_pyrophosphorylase__ditp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002620</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac88c72c-c847-4b90-a7cf-67d2b7d7baba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ditp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dimp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AKP1" metaid="_5f39b478-414d-4cff-80b0-3471249098b5" name="alkaline_phosphatase__Dihydroneopterin_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006010</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f39b478-414d-4cff-80b0-3471249098b5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006010"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ahdt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="3"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_dhnpt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDCP3App" metaid="_46a42bc0-a5a3-4663-b4f2-098b6013a76d" name="murein_L_D_carboxypeptidase__murein5px3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_46a42bc0-a5a3-4663-b4f2-098b6013a76d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5px3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein3px3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_alaala_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_fru_e" metaid="bd070f57-ef0c-4e22-8ebb-4b130fee5e15" name="R_EX_fru_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bd070f57-ef0c-4e22-8ebb-4b130fee5e15"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_fru_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G5SD" metaid="_5e5a6203-6e16-45a3-ac35-68474577faeb" name="glutamate_5_semialdehyde_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025220</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.2.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5e5a6203-6e16-45a3-ac35-68474577faeb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025220"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu5sa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG120abcpp" metaid="_1975a1ad-dcdc-4c11-8cc8-585ca1e0189d" name="phosphatidylglycerol_transport_via_ABC_system__n_C12_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1975a1ad-dcdc-4c11-8cc8-585ca1e0189d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg120_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALATRS" metaid="_10bf1fc9-8ae9-4c5e-b9a5-1272e728f66b" name="Alanyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015200</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_10bf1fc9-8ae9-4c5e-b9a5-1272e728f66b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaala_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_alatrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UGLT" metaid="f5315705-4bdc-4bd0-bde5-4086d5e04555" name="UDPglucose__hexose_1_phosphate_uridylyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.7.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f5315705-4bdc-4bd0-bde5-4086d5e04555"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gal1p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g1p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpgal_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGDI_1" metaid="_9a35f452-ad2d-45eb-968e-861d802e0d77" name="R_AGDI_1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004890</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.5.3.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a35f452-ad2d-45eb-968e-861d802e0d77"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.3.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_agm_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_Ncbmpts_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ICYSDS" metaid="c5d2b5ae-ffc2-4230-b55c-96ce23335f77" name="ISC_Cysteine_desulfuration" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002960</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5d2b5ae-ffc2-4230-b55c-96ce23335f77"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iscs_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iscssh_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS160pp" metaid="_5537e257-21c6-450f-a2aa-66f24e786a4b" name="cardiolipin_synthase__periplasmic__n_C16_0_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5537e257-21c6-450f-a2aa-66f24e786a4b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg160_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_clpn160_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UGMDDS" metaid="_6a1f65bb-3745-42d0-938e-35e94dab6724" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamyl_meso_2_6_diaminopimeloyl_D_alanyl_D_alanine_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011290</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6a1f65bb-3745-42d0-938e-35e94dab6724"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011290"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_alaala_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ugmd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ugmda_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALAt2pp" metaid="_3b2d1e9b-1c85-4c12-82dd-7cff859a2796" name="L_alanine_transport_in_via_proton_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3b2d1e9b-1c85-4c12-82dd-7cff859a2796"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS8" metaid="_083a9bec-2e42-4a56-9543-5e74f0b5fbec" name="R_AACPS8" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025957</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_083a9bec-2e42-4a56-9543-5e74f0b5fbec"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025957"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dca_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ETOHtrpp" metaid="be0ab22f-7c5e-46a5-912b-90282c14ca8d" name="R_ETOHtrpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#be0ab22f-7c5e-46a5-912b-90282c14ca8d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_etoh_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_etoh_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA161" metaid="c5cb8e82-ea82-41ec-97c0-030e7cfc14c8" name="Phosphatidylserine_syntase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5cb8e82-ea82-41ec-97c0-030e7cfc14c8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdhdec9eg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ps161_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS7" metaid="_881173e0-e214-4f00-9868-da894511bbf9" name="R_AACPS7" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025956</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_881173e0-e214-4f00-9868-da894511bbf9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025956"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ddca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ddcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA160" metaid="_3af0fb3a-041f-49ca-a021-1dff6738a72b" name="Phosphatidylserine_syntase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3af0fb3a-041f-49ca-a021-1dff6738a72b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdhdecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ps160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS6" metaid="_72e77e6a-c3b9-43cc-b100-5758dbd25509" name="R_AACPS6" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025955</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_72e77e6a-c3b9-43cc-b100-5758dbd25509"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025955"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocdca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MMSAD3" metaid="c4305d14-50b5-4e44-9117-70f366f9fc84" name="methylmalonate_semialdehyde_dehydrogenase__malonic_semialdehyde_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.2.1.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c4305d14-50b5-4e44-9117-70f366f9fc84"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_msa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS5" metaid="cc8eef06-b2af-4f40-a78c-dd54928aa991" name="R_AACPS5" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025954</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cc8eef06-b2af-4f40-a78c-dd54928aa991"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025954"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocdcea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_octeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS4" metaid="_5058549f-0714-424c-bdba-27365bbd9aef" name="R_AACPS4" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025953</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5058549f-0714-424c-bdba-27365bbd9aef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025953"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdcea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LYSt3r" metaid="_4eee9502-90f0-4fef-b8f3-ceedca7c6099" name="R_LYSt3r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013540</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4eee9502-90f0-4fef-b8f3-ceedca7c6099"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_lys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_lys_L_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS3" metaid="ebe987f4-b5a1-4b5c-b3a0-ee9e21ca82ba" name="R_AACPS3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025952</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ebe987f4-b5a1-4b5c-b3a0-ee9e21ca82ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025952"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_palmACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OCOAT1r" metaid="_42a21866-b7d0-4ff6-8ee2-8d37d998c3ec" name="3_oxoacid_CoA_transferase__Succinyl_CoA__acetoacetate_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.8.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_42a21866-b7d0-4ff6-8ee2-8d37d998c3ec"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_succoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acac_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_aacoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYC3Pabcpp" metaid="_242fc832-4f77-4608-b964-ee1b8debb0a3" name="sn_Glycerol_3_phosphate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_242fc832-4f77-4608-b964-ee1b8debb0a3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS120" metaid="_4fc491f7-a221-48ec-9446-38f1687f0093" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4fc491f7-a221-48ec-9446-38f1687f0093"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcaACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3oddecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS2" metaid="_6000cb6e-ade8-45f3-98e9-39dc1d414e56" name="R_AACPS2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025951</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6000cb6e-ade8-45f3-98e9-39dc1d414e56"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025951"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ttdcea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOX1tex" metaid="_93de9196-0857-4430-a373-86039c814f4d" name="R_METSOX1tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_93de9196-0857-4430-a373-86039c814f4d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_metsox_S_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_metsox_S_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS121" metaid="_7dc727be-3606-40dd-9c9a-7ba4444a936c" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C12_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7dc727be-3606-40dd-9c9a-7ba4444a936c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdec3eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3ocddec5eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS1" metaid="_9d4ae961-5fcc-416e-8f9f-dbc6ca85a10a" name="R_AACPS1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d4ae961-5fcc-416e-8f9f-dbc6ca85a10a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttdca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_myrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FMNRx2" metaid="d4736fee-2215-4fbb-a33e-71063cbc9056" name="FMN_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002700 AND XFCFBP8418_002710</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.5.1.38</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d4736fee-2215-4fbb-a33e-71063cbc9056"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.38"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002710"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002700"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fmnh2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_LesA_e" metaid="_97bd024a-a074-4c59-b585-7cd099d362f0" name="R_DM_LesA_e" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97bd024a-a074-4c59-b585-7cd099d362f0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_LesA_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL80t2pp" metaid="_901fc987-d81e-4e25-a9b6-683c318ff94d" name="fatty_acid_CoA_ligase__octanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_901fc987-d81e-4e25-a9b6-683c318ff94d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_octa_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_occoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP181" metaid="_44c752e9-a069-476f-93a5-d633b4fb84d5" name="phosphatidylglycerol_phosphate_phosphatase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_44c752e9-a069-476f-93a5-d633b4fb84d5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp181_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg181_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP180" metaid="_9bf18a9c-6d98-4bce-852e-d76f7cb4166b" name="phosphatidylglycerol_phosphate_phosphatase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9bf18a9c-6d98-4bce-852e-d76f7cb4166b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp180_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGAMT" metaid="_6703ddcc-d856-4bb4-81b8-3bee381864bc" name="phosphoglucosamine_mutase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003010</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.4.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6703ddcc-d856-4bb4-81b8-3bee381864bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003010"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gam1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gam6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FORtppi" metaid="b520ec68-f923-44e9-8ec6-1d9682bc9a43" name="formate_transport_via_diffusion__cytoplasm_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b520ec68-f923-44e9-8ec6-1d9682bc9a43"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_for_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3PEPTabcpp" metaid="af26fc82-0b1d-48f8-9a47-605ace91c3ef" name="tripeptide__LalaDgluMdap__transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004070 ) OR ( XFCFBP8418_004550 ) OR ( XFCFBP8418_007680 ) OR ( XFCFBP8418_010500 ) OR ( XFCFBP8418_013240 ) OR ( XFCFBP8418_019450 ) OR ( XFCFBP8418_022120 ) OR ( XFCFBP8418_024570 ) OR ( XFCFBP8418_024670 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#af26fc82-0b1d-48f8-9a47-605ace91c3ef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019450"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024570"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013240"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdap_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SDPDS" metaid="_443aa0fb-d4f8-44c9-8b90-4dd6660bb936" name="succinyl_diaminopimelate_desuccinylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015120</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 3.5.1.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_443aa0fb-d4f8-44c9-8b90-4dd6660bb936"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015120"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sl26da_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_26dap_LL_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Kt2tex" metaid="_91524f00-6fa5-476e-a636-6f8fc06a942d" name="R_Kt2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_91524f00-6fa5-476e-a636-6f8fc06a942d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_k_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_k_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EPStexXF" metaid="_3d1726d9-e87d-47e6-a3cc-04bcf384654e" name="R_EPStexXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021490</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d1726d9-e87d-47e6-a3cc-04bcf384654e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021490"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_EPS_XF_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_EPS_XF_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE160abcpp" metaid="_34f9a2fd-7e5b-4a2f-bf94-760e334fbeb7" name="phosphatidylethanolamine_transport_via_ABC_system__n_C16_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34f9a2fd-7e5b-4a2f-bf94-760e334fbeb7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe160_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR140tipp" metaid="a83a9158-b98d-4ead-b7b5-a0fde97b8ed5" name="R_12DGR140tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a83a9158-b98d-4ead-b7b5-a0fde97b8ed5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr140_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr140_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_so3_e" metaid="_3bb6c9dd-2ae2-4a45-ab92-96297b8b53e0" name="R_EX_so3_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3bb6c9dd-2ae2-4a45-ab92-96297b8b53e0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_so3_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THYMtex" metaid="_2e56144f-24f5-4667-80e1-80365102e1f7" name="R_THYMtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2e56144f-24f5-4667-80e1-80365102e1f7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thym_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_thym_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LPSS2XF" metaid="_3df2e4a4-fd35-4c2f-871d-5aa2f6284b02" name="R_LPSS2XF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001200</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3df2e4a4-fd35-4c2f-871d-5aa2f6284b02"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpxyl_c" stoichiometry="320"/> + <speciesReference constant="true" species="M_dtdprmn_c" stoichiometry="2188"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dtdp_c" stoichiometry="2188"/> + <speciesReference constant="true" species="M_OLPS_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="320"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACCOAL2r" metaid="_938a464e-1718-4a3f-b0e1-3d0889fd7471" name="R_ACCOAL2r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020630</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 6.2.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_938a464e-1718-4a3f-b0e1-3d0889fd7471"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP180abcpp" metaid="_2b89ef9a-099e-401d-bdd2-f1b9270863b4" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C18_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2b89ef9a-099e-401d-bdd2-f1b9270863b4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp180_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TREHpp" metaid="b82dba7e-27f5-4078-89c5-c8b9dcd5e769" name="alpha_alpha_trehalase__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.28</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b82dba7e-27f5-4078-89c5-c8b9dcd5e769"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.28"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tre_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TTDCEAtexi" metaid="_60d4b136-801a-4f2e-8c68-7d58c19960df" name="R_TTDCEAtexi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_60d4b136-801a-4f2e-8c68-7d58c19960df"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttdcea_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ttdcea_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KAS14" metaid="_7bdb0e75-55bc-4fe1-bf0d-6888bf0d0261" name="beta_ketoacyl_ACP_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Membrane_Lipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7bdb0e75-55bc-4fe1-bf0d-6888bf0d0261"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_actACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE2tex" metaid="f7661dec-e864-4895-a1c8-389b04f18a43" name="iron__II__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f7661dec-e864-4895-a1c8-389b04f18a43"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fe2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fe2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_AMOB" metaid="dcaacf85-ca34-4e84-9012-59026c2aa5a0" name="Sink_needed_to_allow_S_Adenosyl_4_methylthio_2_oxobutanoate_to_leave_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dcaacf85-ca34-4e84-9012-59026c2aa5a0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amob_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALLTNr" metaid="c5916cf1-d154-4738-be1f-27ed22e93f83" name="R_ALLTNr" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025380</p> + <p>SUBSYSTEM: Nitrogen_Metabolism</p> + <p>EC_NUMBER: 3.5.2.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5916cf1-d154-4738-be1f-27ed22e93f83"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.2.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_alltn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_alltt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GALKr" metaid="_1b061ea9-269a-4250-b937-b58c2e495156" name="galactokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1b061ea9-269a-4250-b937-b58c2e495156"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gal_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gal1p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KAS15" metaid="f7e312d1-3191-40ab-8df4-da52647f585d" name="beta_ketoacyl_ACP_synthase__2_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017940</p> + <p>SUBSYSTEM: Membrane_Lipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.180</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f7e312d1-3191-40ab-8df4-da52647f585d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.180"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017940"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_actACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MPTG" metaid="cdcd4102-ac04-4274-9c28-635253283c7b" name="murein_polymerizing_transglycosylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004700 AND XFCFBP8418_008630 ) OR ( XFCFBP8418_004700 AND XFCFBP8418_010420 ) OR ( XFCFBP8418_004700 AND XFCFBP8418_020460 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cdcd4102-ac04-4274-9c28-635253283c7b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010420"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uaagmda_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAGPT3" metaid="b0f5ce42-1b54-4bf5-850c-120ea691fa8a" name="UDP_N_acetylglucosamine_N_acetylmuramyl__pentapeptide_pyrophosphoryl_undecaprenol_N_acetylglucosamine_transferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011260</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.4.1.227</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b0f5ce42-1b54-4bf5-850c-120ea691fa8a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.227"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uagmda_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uacgam_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uaagmda_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA181" metaid="ac6bbdd2-a452-49af-a324-bea473b59609" name="Phosphatidylserine_syntase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac6bbdd2-a452-49af-a324-bea473b59609"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdodec11eg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ps181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS100" metaid="_7838ce1b-c744-4ef7-b2cc-c53afa1ac0a2" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C10_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7838ce1b-c744-4ef7-b2cc-c53afa1ac0a2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3odecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA180" metaid="e090a074-5339-4dc6-999e-1b5d6b1f9c99" name="Phosphatidylserine_syntase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e090a074-5339-4dc6-999e-1b5d6b1f9c99"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdodecg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ps180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAGDP" metaid="_7d0efe00-c44c-4c84-b6fb-e21815fc8e35" name="UDP_N_acetylglucosamine_diphosphorylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023670</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7d0efe00-c44c-4c84-b6fb-e21815fc8e35"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023670"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uacgam_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACCITRH" metaid="beab3f41-ac76-4242-925b-87d9c7fed86a" name="R_ACCITRH" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025270</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 3.5.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#beab3f41-ac76-4242-925b-87d9c7fed86a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025270"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_accitr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_citr_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NAt3_1" metaid="c13f60cb-78c9-45d6-8713-98dc58e03a49" name="R_NAt3_1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001440</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c13f60cb-78c9-45d6-8713-98dc58e03a49"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_na1_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_chitin_polymer_e" metaid="_433c8e40-7bec-4183-8a78-017746677832" name="R_EX_chitin_polymer_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_433c8e40-7bec-4183-8a78-017746677832"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_chitin_polymer_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IPPMIb" metaid="f8f8e4fd-f967-4d82-860a-e95897d7c117" name="2_isopropylmalate_hydratase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021510 AND XFCFBP8418_021520</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.33</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f8f8e4fd-f967-4d82-860a-e95897d7c117"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.33"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021520"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021510"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ippm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3c3hmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IPPMIa" metaid="d0487c14-22ef-4ec4-91f1-7a4b60b01854" name="3_isopropylmalate_dehydratase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021510 AND XFCFBP8418_021520</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.33</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d0487c14-22ef-4ec4-91f1-7a4b60b01854"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.33"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021520"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021510"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3c2hmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ippm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADEt2rpp" metaid="_57ae459d-f59e-404a-867e-2fb6c241c5fb" name="adenine_transport_via_proton_symport__reversible___periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_57ae459d-f59e-404a-867e-2fb6c241c5fb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ade_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ade_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UREA" metaid="e53cacbc-1df2-45a8-87e3-888fc0cc1d8b" name="urease" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.5.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e53cacbc-1df2-45a8-87e3-888fc0cc1d8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_urea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG141abcpp" metaid="a6b6b0c3-0333-4a06-9d42-71915151005e" name="phosphatidylglycerol_transport_via_ABC_system__n_C14_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a6b6b0c3-0333-4a06-9d42-71915151005e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg141_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRPPS" metaid="c1d21756-841a-4c8f-a3ec-050b279a553c" name="phosphoribosylpyrophosphate_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012870</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 2.7.6.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c1d21756-841a-4c8f-a3ec-050b279a553c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.6.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT120" metaid="_3bfe3995-07a7-478d-afcb-33082a6a791a" name="1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3bfe3995-07a7-478d-afcb-33082a6a791a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ddcaACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1ddecg3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa120_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN181" metaid="b2ea9316-62d4-4d5f-8377-74f4f759ee1a" name="CDP_diacylglycerol_synthetase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b2ea9316-62d4-4d5f-8377-74f4f759ee1a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pa181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cdpdodec11eg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_X5PL3E" metaid="a132e0d4-615d-4cb2-80d5-b164796db653" name="R_X5PL3E" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a132e0d4-615d-4cb2-80d5-b164796db653"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_xu5p_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ru5p_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HPPK2" metaid="_47036610-be70-43b0-8ff1-24d147c86c79" name="6_hydroxymethyl_dihydropterin_pyrophosphokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026570</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.6.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_47036610-be70-43b0-8ff1-24d147c86c79"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.6.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_6hmhpt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_6hmhptpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE180abcpp" metaid="ac3dee43-de4a-4448-9370-ecc7926b2fa4" name="phosphatidylethanolamine_transport_via_ABC_system__n_C18_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac3dee43-de4a-4448-9370-ecc7926b2fa4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe180_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN180" metaid="fff29606-f162-4780-93f3-475b874c2f59" name="CDP_diacylglycerol_synthetase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fff29606-f162-4780-93f3-475b874c2f59"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdodecg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDCPDPtppi" metaid="_7a4c3dd9-4e12-466f-9bbc-3dbdb36e3b6d" name="R_UDCPDPtppi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7a4c3dd9-4e12-466f-9bbc-3dbdb36e3b6d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udcpdp_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CD2tex" metaid="cee97fe3-a814-4f9d-b69d-6cdb53aabc3f" name="cadmium__Cd_2__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cee97fe3-a814-4f9d-b69d-6cdb53aabc3f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cd2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cd2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_rib_D_e" metaid="_20e83a14-6cb4-4e1b-9c32-bfa6604418b3" name="R_EX_rib_D_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_20e83a14-6cb4-4e1b-9c32-bfa6604418b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_rib_D_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYCt" metaid="_5300ba34-0572-43a1-8e4b-7766ce41b435" name="R_GLYCt" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020710</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5300ba34-0572-43a1-8e4b-7766ce41b435"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_2THZPSN" metaid="_29ed181c-b67e-4396-8010-a03a6ca9a424" name="R_2THZPSN" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002960 AND XFCFBP8418_010710 AND XFCFBP8418_011380 AND XFCFBP8418_025440</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_29ed181c-b67e-4396-8010-a03a6ca9a424"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025440"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011380"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010710"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2c4mthzep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAPabcpp" metaid="_4f146b55-b8fe-46c2-9a7a-bf18896903c7" name="R_DAPabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4f146b55-b8fe-46c2-9a7a-bf18896903c7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_26dap_M_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_26dap_M_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADEtex" metaid="cbfbcfdf-22e9-4308-ac89-9194911f2982" name="adenine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cbfbcfdf-22e9-4308-ac89-9194911f2982"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ade_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ade_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDCP2pp" metaid="_9b337c50-c719-42ec-b785-3c2dfe7f7cef" name="murein_D_D_carboxypeptidase__murein5px4px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_018620 ) OR ( XFCFBP8418_020420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.16.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b337c50-c719-42ec-b785-3c2dfe7f7cef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein5px4px4p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein4px4px4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSDabcpp" metaid="db962fa4-a856-44b9-a7a1-c3b019636173" name="R_CYSDabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#db962fa4-a856-44b9-a7a1-c3b019636173"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UACMAMO" metaid="b8359d44-4150-4ea9-ac92-65b3e076b3f6" name="UDP_N_acetyl_D_mannosamine_oxidoreductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023250</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.336</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b8359d44-4150-4ea9-ac92-65b3e076b3f6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.336"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_uacmam_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_uacmamu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA120" metaid="c1911f53-b995-4962-844e-95575d086deb" name="Phosphatidylserine_syntase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c1911f53-b995-4962-844e-95575d086deb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdddecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ps120_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHRPL" metaid="_144ecfe1-5e21-461a-b6c7-237648271450" name="Chorismate_pyruvate_lyase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011490</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.3.40</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_144ecfe1-5e21-461a-b6c7-237648271450"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.40"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011490"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chor_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4hbz_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PItex" metaid="_021e930c-78bd-4508-9b10-628161093fbc" name="glycero_3_phospho_1_inositol_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_021e930c-78bd-4508-9b10-628161093fbc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3pi_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3pi_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP181abcpp" metaid="_6910f36a-f866-44ec-963f-fb627be23d8e" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C18_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6910f36a-f866-44ec-963f-fb627be23d8e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp181_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_COBALT2tex" metaid="_24ace21b-f744-4cb5-8d4e-f117f90be7c5" name="cobalt__Co_2__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24ace21b-f744-4cb5-8d4e-f117f90be7c5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cobalt2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cobalt2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CITt3tex" metaid="_7f0702f7-9a84-4a84-8655-b46f3695f187" name="R_CITt3tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7f0702f7-9a84-4a84-8655-b46f3695f187"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cit_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cit_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTPCII2" metaid="_0b1ee868-2ca5-41ae-9660-fd42fbfd9a53" name="GTP_cyclohydrolase_II__25drapp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001170</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.5.4.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b1ee868-2ca5-41ae-9660-fd42fbfd9a53"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_25drapp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYCL" metaid="_34a00b12-a3b3-4efe-bfd8-ea0b3648edf7" name="Glycine_Cleavage_System" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003740 AND XFCFBP8418_010560 AND XFCFBP8418_015760 AND XFCFBP8418_015770</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34a00b12-a3b3-4efe-bfd8-ea0b3648edf7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003740"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015770"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010560"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015760"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HBZOPT" metaid="_859b4d9e-d4e9-48fa-8e34-605aeb6bd094" name="Hydroxybenzoate_octaprenyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014680</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.39</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_859b4d9e-d4e9-48fa-8e34-605aeb6bd094"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.39"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_octdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4hbz_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ophb_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDCP2Bpp" metaid="_5bc3d4c2-03ca-4d63-997a-b036b8201da4" name="murein_L_D_carboxypeptidase__murein4p3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5bc3d4c2-03ca-4d63-997a-b036b8201da4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein3p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSabcpp" metaid="bc9f4672-0bd3-4db4-a8de-9293b57677df" name="L_cysteine_uptake_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bc9f4672-0bd3-4db4-a8de-9293b57677df"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NITL4" metaid="_4f226009-7c46-4f5c-bc20-7d6b71729812" name="nitrilase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004900</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 3.5.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4f226009-7c46-4f5c-bc20-7d6b71729812"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pheacnit_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_BIOMASS_c" metaid="_4871584b-a1fb-4f05-bb6a-81011942db8a" name="R_DM_BIOMASS_c" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4871584b-a1fb-4f05-bb6a-81011942db8a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_BIOMASS_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAPDC" metaid="_3ae6ce1a-3c5a-4f21-8cfc-bcd76f8eef8d" name="diaminopimelate_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023860</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 4.1.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3ae6ce1a-3c5a-4f21-8cfc-bcd76f8eef8d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023860"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_26dap_M_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_lys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NITL5" metaid="_1307019b-a1b1-4773-8222-16cff7d40ca3" name="nitrilase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004900</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.5.5.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1307019b-a1b1-4773-8222-16cff7d40ca3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_bzonit_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_bz_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SO3abcpp" metaid="faf82e1a-1d8a-4788-bd9a-b45d27c4d584" name="R_SO3abcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004070 AND XFCFBP8418_004080 AND XFCFBP8418_004090 AND XFCFBP8418_004100</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#faf82e1a-1d8a-4788-bd9a-b45d27c4d584"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004100"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004080"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so3_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACM6PH" metaid="_63d3f650-18a4-4ff6-9e83-d579b44b3efb" name="N_acetylmuramate_6_phosphate_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.2.1.126</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_63d3f650-18a4-4ff6-9e83-d579b44b3efb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.126"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acmum6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acgam6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lac_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DSBCGT" metaid="_96b1c983-3e7a-4693-9742-690df645eb69" name="DsbC_glutathione_thiotransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003390</p> + <p>SUBSYSTEM: Protein_disulfide_bond_transfer</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96b1c983-3e7a-4693-9742-690df645eb69"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dsbcox_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthrd_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dsbcrd_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthox_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NMNN" metaid="_75340bb8-4f57-4630-b302-0e410854ea1a" name="R_NMNN" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.2.2.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_75340bb8-4f57-4630-b302-0e410854ea1a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ncam_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OGMEACPD" metaid="_0882e8db-1b85-40e8-8720-84d0c41ebce8" name="3_Oxo_glutaryl__ACP__methyl_ester_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0882e8db-1b85-40e8-8720-84d0c41ebce8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hgmeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_egmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_k_e" metaid="_1c224853-b9bd-4b91-9c12-031dc274cf2b" name="R_EX_k_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1c224853-b9bd-4b91-9c12-031dc274cf2b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_k_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG161abcpp" metaid="_4eae385e-cccb-4a2c-bee1-6769794a402c" name="phosphatidylglycerol_transport_via_ABC_system__n_C16_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4eae385e-cccb-4a2c-bee1-6769794a402c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg161_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RBKr" metaid="_28e4dd65-346a-4793-8d21-f58e2830dc0c" name="ribokinase_reversible" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_008660</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28e4dd65-346a-4793-8d21-f58e2830dc0c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008660"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rib_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MICITDr" metaid="_16a96a25-935d-4afd-b4ca-b2b918509ba0" name="2_methylisocitrate_dehydratase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025910</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.2.1.99</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_16a96a25-935d-4afd-b4ca-b2b918509ba0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.99"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2mcacn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_micit_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT140" metaid="_76c327a0-64f3-48af-bac2-21e08135d8f0" name="1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76c327a0-64f3-48af-bac2-21e08135d8f0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_myrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1tdecg3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAMAGS" metaid="_0fe35e46-cae4-4900-aab6-9b60b92b21ee" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamate_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023840</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0fe35e46-cae4-4900-aab6-9b60b92b21ee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uama_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uamag_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRS" metaid="_9ecfd703-3f9b-405b-ac8f-39bd0e0b73d5" name="threonine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020360</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 4.2.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ecfd703-3f9b-405b-ac8f-39bd0e0b73d5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phom_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thr_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DKGLUCK" metaid="_606ba1b7-d299-4516-800f-23ce787b4edb" name="2_deoxy_5_keto_D_gluconic_acid_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.92</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_606ba1b7-d299-4516-800f-23ce787b4edb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.92"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dkglc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_6pddgluc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT141" metaid="_4d748a4a-7b65-483b-a02a-dc430687525b" name="1_tetradec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4d748a4a-7b65-483b-a02a-dc430687525b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_1tdec7eg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN160" metaid="_690fdbee-8b0f-4df9-94bf-84e7fa117bcb" name="CDP_diacylglycerol_synthetase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_690fdbee-8b0f-4df9-94bf-84e7fa117bcb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa160_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdhdecg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN161" metaid="a97705a7-3409-4ac6-88c4-d8201067e87f" name="CDP_diacylglycerol_synthetase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a97705a7-3409-4ac6-88c4-d8201067e87f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa161_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdhdec9eg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PMDPHT" metaid="_63c64b55-d57b-433b-b37b-8926231124e5" name="pyrimidine_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005170</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_63c64b55-d57b-433b-b37b-8926231124e5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5aprbu_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4r5au_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S2FE2SS2" metaid="_79f20238-a43c-4471-ba5e-19db00879552" name="R_S2FE2SS2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950 AND XFCFBP8418_002960 AND XFCFBP8418_025330</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79f20238-a43c-4471-ba5e-19db00879552"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufsesh_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="7"/> + <speciesReference constant="true" species="M_sufse_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDCP1App" metaid="cae4d2be-3ee7-4bb6-baa9-097d9e2efd8c" name="murein_L_D_carboxypeptidase__murein5px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cae4d2be-3ee7-4bb6-baa9-097d9e2efd8c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_alaala_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein3px4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HCO3tex" metaid="ed627a8a-6b03-4bec-9866-917c9efefb6a" name="R_HCO3tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ed627a8a-6b03-4bec-9866-917c9efefb6a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hco3_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hco3_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_URCN" metaid="e26a7dfb-3e73-45e3-9850-e0feb8da90ae" name="urocanase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.49</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e26a7dfb-3e73-45e3-9850-e0feb8da90ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.49"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_urcan_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4izp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HEMEOS" metaid="_05e2bd9b-e836-41a3-b965-318c66d29860" name="Heme_O_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003980</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.141</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_05e2bd9b-e836-41a3-b965-318c66d29860"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.141"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_frdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pheme_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hemeO_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HCO3abcpp" metaid="fc79df28-db6d-4647-9a25-7e5d039f0e34" name="R_HCO3abcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007690</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fc79df28-db6d-4647-9a25-7e5d039f0e34"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hco3_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hco3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACOTA" metaid="_35d3bd35-ff20-4233-ac07-f7524dd63794" name="acetylornithine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003360</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.6.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_35d3bd35-ff20-4233-ac07-f7524dd63794"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acorn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acg5sa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHPS2" metaid="_0910cfff-a0d6-449d-a8a9-69d6689a0900" name="dihydropteroate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014930</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0910cfff-a0d6-449d-a8a9-69d6689a0900"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4abz_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_6hmhptpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhpt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL100t2pp" metaid="d1eae919-daa3-4d78-a329-cb01833e7d7d" name="fatty_acid_CoA_ligase__decanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d1eae919-daa3-4d78-a329-cb01833e7d7d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dca_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcacoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NMNtex" metaid="d126276d-34ac-45a1-8be7-c3482f615ad7" name="R_NMNtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d126276d-34ac-45a1-8be7-c3482f615ad7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nmn_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nmn_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_O2tpp" metaid="_97b68843-fbfc-462b-9b38-b960c6232da5" name="o2_transport_via_diffusion__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97b68843-fbfc-462b-9b38-b960c6232da5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR141tipp" metaid="ffc643cc-a0d4-448a-a6ec-b441b82305be" name="R_12DGR141tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ffc643cc-a0d4-448a-a6ec-b441b82305be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr141_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr141_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SADT2" metaid="_5aa01bac-402d-4015-8fae-d2de0d40a3af" name="Sulfate_adenyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002680 AND XFCFBP8418_002690</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 2.7.7.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5aa01bac-402d-4015-8fae-d2de0d40a3af"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002690"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so4_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_aps_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASP1DC" metaid="_3dad8860-fadb-4d45-b78f-ea6623501438" name="aspartate_1_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026540</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3dad8860-fadb-4d45-b78f-ea6623501438"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_B_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA141" metaid="_96d1e5e8-7505-4e20-bb88-8de38ff45115" name="Phosphatidylserine_syntase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96d1e5e8-7505-4e20-bb88-8de38ff45115"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdtdec7eg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ps141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OGMEACPS" metaid="_035776d4-ce25-4406-adbc-5d614ecb3297" name="3_Oxo_glutaryl__ACP__methyl_ester_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017940</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_035776d4-ce25-4406-adbc-5d614ecb3297"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017940"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malcoame_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ogmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA140" metaid="b6be7b5c-9ee1-4d01-8f46-585cebd1a3b9" name="Phosphatidylserine_syntase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b6be7b5c-9ee1-4d01-8f46-585cebd1a3b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdtdecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ps140_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLCtex" metaid="_42438596-6d57-4484-8c61-7ae6ea285615" name="glucose_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_42438596-6d57-4484-8c61-7ae6ea285615"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glc_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CMPN" metaid="f1e94955-c06e-4682-afdf-337ba30a04b0" name="R_CMPN" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007150</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.2.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f1e94955-c06e-4682-afdf-337ba30a04b0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007150"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_csn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OGMEACPR" metaid="ef87a881-74aa-4665-8b74-7390b15be581" name="3_Oxo_glutaryl__ACP__methyl_ester_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ef87a881-74aa-4665-8b74-7390b15be581"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ogmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hgmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NACODA" metaid="_3f26c8e9-8f85-4cc5-a178-ac9e0dc1c6f9" name="N_acetylornithine_deacetylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025270</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3f26c8e9-8f85-4cc5-a178-ac9e0dc1c6f9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025270"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acg5sa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu5sa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NNATr" metaid="_2adc3af3-4199-4fbf-be6c-96b4c4c930f7" name="nicotinate_nucleotide_adenylyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019740</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.7.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2adc3af3-4199-4fbf-be6c-96b4c4c930f7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019740"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nicrnt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dnad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LGTHL" metaid="fcef5802-3d5d-46f2-a6ba-453e430b6219" name="lactoylglutathione_lyase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003630</p> + <p>SUBSYSTEM: Methylglyoxal_Metabolism</p> + <p>EC_NUMBER: 4.4.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fcef5802-3d5d-46f2-a6ba-453e430b6219"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.4.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mthgxl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_lgt_S_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_tre_e" metaid="_2b25f65c-97e2-404d-901a-2f351b852d79" name="R_EX_tre_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2b25f65c-97e2-404d-901a-2f351b852d79"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_tre_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP160pp" metaid="a1b419c0-81da-4e40-a057-a1e9407e11f6" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a1b419c0-81da-4e40-a057-a1e9407e11f6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp160_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg160_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYAT" metaid="e9dc1a75-b6d0-406f-afa0-5fbbc5757598" name="glycine_C_acetyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004000</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 2.3.1.29</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e9dc1a75-b6d0-406f-afa0-5fbbc5757598"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.29"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004000"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2aobut_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OPMEACPR" metaid="_38311acc-fe0e-4fe8-b291-e50c8b6cd311" name="3_Oxo_pimeloyl__ACP__methyl_ester_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_38311acc-fe0e-4fe8-b291-e50c8b6cd311"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_opmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hpmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OPMEACPS" metaid="de252ec5-5a95-4339-95de-75bd74c748d6" name="3_Oxo_pimeloyl__ACP__methyl_ester_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#de252ec5-5a95-4339-95de-75bd74c748d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gmeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_opmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NMNt7pp" metaid="d24df04a-1053-45b4-9d5b-1b2bb443830c" name="R_NMNt7pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.2.2.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d24df04a-1053-45b4-9d5b-1b2bb443830c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nmn_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ncam_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROT_pe_LesA" metaid="_5357bd7d-8ed9-4a47-9785-f9800b06ae3a" name="R_PROT_pe_LesA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002410 AND XFCFBP8418_002430 AND XFCFBP8418_002450 AND XFCFBP8418_002490 AND XFCFBP8418_002510 AND XFCFBP8418_007090 AND XFCFBP8418_007140 AND XFCFBP8418_008580 AND XFCFBP8418_009650 AND XFCFBP8418_014460</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5357bd7d-8ed9-4a47-9785-f9800b06ae3a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002490"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002430"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008580"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002410"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007140"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009650"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002450"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="601"/> + <speciesReference constant="true" species="M_LesA_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="601"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_LesA_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="601"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="601"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THIORDXi" metaid="_0cd67b67-db31-4c16-81ee-fb0e0ac0b203" name="hydrogen_peroxide_reductase__thioredoxin_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_009690 ) OR ( XFCFBP8418_009690 AND XFCFBP8418_013260 ) OR ( XFCFBP8418_016490 ) OR ( XFCFBP8418_027830 )</p> + <p>SUBSYSTEM: Superoxide_radicals_degradation</p> + <p>EC_NUMBER: 1.11.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0cd67b67-db31-4c16-81ee-fb0e0ac0b203"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.11.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009690"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027830"/> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016490"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SLNTtpp" metaid="c6a70f8d-7458-4027-a984-349491373917" name="selenite_transport_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004070 AND XFCFBP8418_004080 AND XFCFBP8418_004090</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c6a70f8d-7458-4027-a984-349491373917"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004080"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_slnt_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_slnt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN141" metaid="d26ad3a6-bebe-42cd-9237-035ba1b3eed7" name="CDP_diacylglycerol_synthetase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d26ad3a6-bebe-42cd-9237-035ba1b3eed7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pa141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdtdec7eg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGTRS" metaid="_498f98ae-e4c7-42d3-8f54-d49e92362ece" name="Arginyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015410</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_498f98ae-e4c7-42d3-8f54-d49e92362ece"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015410"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaarg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_argtrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_gam_e" metaid="_5ff50da0-3067-4ccc-bc06-431e0e095786" name="R_EX_gam_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ff50da0-3067-4ccc-bc06-431e0e095786"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_gam_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN140" metaid="_28c0f073-5fec-4c04-8491-4d0cd1fc0982" name="CDP_diacylglycerol_synthetase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28c0f073-5fec-4c04-8491-4d0cd1fc0982"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pa140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cdpdtdecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHNCOAT" metaid="_172f23b0-3e36-4ec7-a8f7-4877f049e313" name="R_DHNCOAT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000310 ) OR ( XFCFBP8418_016380 ) OR ( XFCFBP8418_027720 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_172f23b0-3e36-4ec7-a8f7-4877f049e313"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000310"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016380"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_14dhncoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhna_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OCDCAtexi" metaid="_83ec1012-b479-41ea-9b1c-741d6ab0c55b" name="R_OCDCAtexi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83ec1012-b479-41ea-9b1c-741d6ab0c55b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocdca_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ocdca_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INOSTt2pp" metaid="_60d617c5-eb84-43d2-a135-e69aea81b345" name="myo_Inositol_transport_in_via_proton_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_60d617c5-eb84-43d2-a135-e69aea81b345"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_inost_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_inost_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INDOLEtex" metaid="_3d815093-2372-46d7-b732-629120c99cb7" name="R_INDOLEtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d815093-2372-46d7-b732-629120c99cb7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_indole_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_indole_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CMPA_1" metaid="_3bf975a4-4ad7-4ad8-9f6b-e7e926c264a4" name="R_CMPA_1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 3.5.1.53</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3bf975a4-4ad7-4ad8-9f6b-e7e926c264a4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.53"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_Ncbmpts_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ptrc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TTDCAtex" metaid="f68853a7-bb81-4117-8b8a-d5b23354fe12" name="Tetradecanoate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f68853a7-bb81-4117-8b8a-d5b23354fe12"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttdca_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ttdca_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BPNT" metaid="_0bd2463b-6ba8-4599-8cc9-37d09a118595" name="3__5__bisphosphate_nucleotidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015810</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 3.1.3.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0bd2463b-6ba8-4599-8cc9-37d09a118595"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CBPS" metaid="d26f35f6-2ec3-4773-9be0-0c2ebea9bb7e" name="carbamoyl_phosphate_synthase__glutamine_hydrolysing_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023960 AND XFCFBP8418_023970</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 6.3.5.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d26f35f6-2ec3-4773-9be0-0c2ebea9bb7e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.5.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023970"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023960"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hco3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_cbp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALCD2y" metaid="b889036a-9533-4a29-bce6-e97aa68065d0" name="alcohol_dehydrogenase__ethanol_nadp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021600</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b889036a-9533-4a29-bce6-e97aa68065d0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021600"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_etoh_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acald_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EPMEACPR" metaid="_0f96bf08-f967-48f3-93bf-7dce412104f3" name="Enoylpimeloyl__ACP__methyl_ester_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0f96bf08-f967-48f3-93bf-7dce412104f3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_epmeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOBDabcpp" metaid="a3c26352-4e70-49d6-bdbe-251095bf2931" name="molybdate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004070 AND XFCFBP8418_004080 AND XFCFBP8418_004090 AND XFCFBP8418_004100</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a3c26352-4e70-49d6-bdbe-251095bf2931"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004100"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004080"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mobd_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mobd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UMPK" metaid="_843f2051-31c6-49f8-9274-c50f7feaa5f5" name="UMP_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004870 ) OR ( XFCFBP8418_024760 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_843f2051-31c6-49f8-9274-c50f7feaa5f5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004870"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024760"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_dextrin_e" metaid="_0d547eb7-32fb-4cfb-a882-4ca7f6e35a8d" name="R_EX_dextrin_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0d547eb7-32fb-4cfb-a882-4ca7f6e35a8d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_dextrin_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAPtex" metaid="_95c3d2bf-26e3-4528-b8d7-220421fe20b3" name="R_DAPtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_95c3d2bf-26e3-4528-b8d7-220421fe20b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_26dap_M_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_26dap_M_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OPMEACPD" metaid="_5bb5cc38-4c7b-4c7b-a903-879afa6edeb4" name="3_Oxo_pimeloyl__ACP__methyl_ester_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5bb5cc38-4c7b-4c7b-a903-879afa6edeb4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hpmeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_epmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSr" metaid="_52a59611-b4b8-491c-8a81-77a799440f58" name="methionine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020760</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 2.1.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_52a59611-b4b8-491c-8a81-77a799440f58"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020760"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hcys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5mthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_F2NAPPUDC" metaid="_32a86585-5561-443d-b82a-af62daf8dd19" name="R_F2NAPPUDC" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004820</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_32a86585-5561-443d-b82a-af62daf8dd19"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpacfuc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f2Nappudp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MPTSS" metaid="f93c4e56-1970-4ac8-9a61-bdc9fb0932a5" name="molybdopterin_synthase_sulfurylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007180</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.80</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f93c4e56-1970-4ac8-9a61-bdc9fb0932a5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.80"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_moadcoo_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_moadamp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGabcpp" metaid="_1afcd294-0571-4975-87e2-dc8f443379e6" name="L_arginine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1afcd294-0571-4975-87e2-dc8f443379e6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_arg_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2tex" metaid="_39f5e57f-2b12-494f-bd68-9ba86f019199" name="R_H2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_39f5e57f-2b12-494f-bd68-9ba86f019199"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_2THZPSN2" metaid="cd8edc97-7777-49ff-8ec2-cdafe1b21523" name="R_2THZPSN2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002960 AND XFCFBP8418_010710 AND XFCFBP8418_011380 AND XFCFBP8418_025440</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd8edc97-7777-49ff-8ec2-cdafe1b21523"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025440"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011380"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010710"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2c4mthzep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTRLASE3" metaid="_134e14c8-23d7-4975-8993-627cad8b0328" name="nitrilase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004900</p> + <p>SUBSYSTEM: Nitrile_degradation</p> + <p>EC_NUMBER: 3.5.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_134e14c8-23d7-4975-8993-627cad8b0328"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_acybut_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUMt2_2tex" metaid="e84f88d3-ed67-4fe6-8c89-1d05d753a009" name="R_FUMt2_2tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e84f88d3-ed67-4fe6-8c89-1d05d753a009"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fum_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTRLASE2" metaid="a994ee3a-5c18-4224-b252-d544d7721451" name="nitrilase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004900</p> + <p>SUBSYSTEM: Nitrile_degradation</p> + <p>EC_NUMBER: 3.5.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a994ee3a-5c18-4224-b252-d544d7721451"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_aprop_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ILETA" metaid="_4faf7029-4b9a-45ef-995a-dd6b6cd7daa0" name="isoleucine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001240</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4faf7029-4b9a-45ef-995a-dd6b6cd7daa0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ile_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3mop_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUN" metaid="_6d5db020-42d2-4c67-b09a-71d599af89fd" name="glutaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026750</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 3.5.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6d5db020-42d2-4c67-b09a-71d599af89fd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUR" metaid="ecfb0ef4-ec37-41aa-9ffd-d6a6e4f2054c" name="glutamate_racemase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ecfb0ef4-ec37-41aa-9ffd-d6a6e4f2054c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE3abcpp" metaid="d36a7413-0b8c-4b38-abc3-820c39ccf4ae" name="R_FE3abcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 3.6.3.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d36a7413-0b8c-4b38-abc3-820c39ccf4ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe3_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN120" metaid="_0ba1e8dc-1e0d-4dc0-ad46-1e4fdd620792" name="CDP_diacylglycerol_synthetase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ba1e8dc-1e0d-4dc0-ad46-1e4fdd620792"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cdpdddecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NACtpp" metaid="ae1e97f9-8617-497c-ae71-24585acd3ce5" name="R_NACtpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae1e97f9-8617-497c-ae71-24585acd3ce5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nac_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LIPOCT" metaid="bdab0b04-e8cb-4bab-8f54-163eae6288b3" name="Lipoyl_octanoyl__transferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022350</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bdab0b04-e8cb-4bab-8f54-163eae6288b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_octapb_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SHCHF" metaid="d4619ccf-80f9-4cad-96ea-bba4caee5f43" name="R_SHCHF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010970</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.99.1.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d4619ccf-80f9-4cad-96ea-bba4caee5f43"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.99.1.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010970"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_scl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_sheme_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_fe3_e" metaid="d2a448eb-c902-4e33-ab88-6e80ede7832f" name="R_EX_fe3_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d2a448eb-c902-4e33-ab88-6e80ede7832f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_fe3_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ILEabcpp" metaid="_1db2a1a5-3ad1-49be-b2f5-9426939530b0" name="L_isoleucine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1db2a1a5-3ad1-49be-b2f5-9426939530b0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ile_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ile_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NADDP" metaid="_3755c964-c650-40a9-a331-572a12deb4d8" name="R_NADDP" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012090</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.6.1.22</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3755c964-c650-40a9-a331-572a12deb4d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.22"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012090"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nmn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDCPDPS" metaid="dcba839d-2519-4cb8-9aab-1b45abfea0b7" name="Undecaprenyl_diphosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024830</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dcba839d-2519-4cb8-9aab-1b45abfea0b7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024830"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_frdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ipdp_c" stoichiometry="8"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="8"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NMNATr" metaid="_1536dc85-983a-4dc5-a7b2-1693baf7ee7f" name="nicotinamide_nucleotide_adenylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019740</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1536dc85-983a-4dc5-a7b2-1693baf7ee7f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019740"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYALDtpp" metaid="_3d01642d-709a-4a12-9b8e-5c4c7b9143ec" name="R_GLYALDtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020710</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d01642d-709a-4a12-9b8e-5c4c7b9143ec"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyald_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyald_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CS" metaid="_23d90c22-f4bc-4bde-8c29-ab8d669a9aed" name="citrate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002320</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 2.3.3.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_23d90c22-f4bc-4bde-8c29-ab8d669a9aed"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.3.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002320"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cit_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GDDMR" metaid="c8ea31f2-689b-402d-8528-16afb300f073" name="R_GDDMR" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006450</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.1.1.281</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c8ea31f2-689b-402d-8528-16afb300f073"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.281"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006450"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp6dm_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp4d6dm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ABTA" metaid="_3feec985-0dfd-47db-890f-ffdb7d9c4a21" name="R_ABTA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003360</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.6.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3feec985-0dfd-47db-890f-ffdb7d9c4a21"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4abut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sucsal_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUM" metaid="_01f69675-9e9e-403f-a07a-1fbb9a7f1344" name="fumarase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_002100 ) OR ( XFCFBP8418_016890 )</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 4.2.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01f69675-9e9e-403f-a07a-1fbb9a7f1344"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002100"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016890"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mal_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TYRTRS" metaid="_68f26176-267c-4299-8ae1-e8ed7005c387" name="tyrosyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015580</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_68f26176-267c-4299-8ae1-e8ed7005c387"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015580"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tyr_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnatyr_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tyrtrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACGAMABCt" metaid="db998b9d-c4f8-49ab-bc81-335ce9c0c4e3" name="R_ACGAMABCt" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#db998b9d-c4f8-49ab-bc81-335ce9c0c4e3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acgam6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHPPDA2" metaid="_397adf45-3110-49b9-ae89-2c10c38bdc95" name="R_DHPPDA2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009790</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.5.4.26</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_397adf45-3110-49b9-ae89-2c10c38bdc95"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.26"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_25drapp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5apru_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADNK1" metaid="_70c5194d-2459-4c73-baaa-52095bab44ce" name="R_ADNK1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026070</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_70c5194d-2459-4c73-baaa-52095bab44ce"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS180pp" metaid="_41e3f736-7f18-4ed2-882d-078fcd073cf4" name="cardiolipin_synthase__periplasmic__n_C18_0_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_41e3f736-7f18-4ed2-882d-078fcd073cf4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg180_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_clpn180_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP161abcpp" metaid="_6b4db725-0f46-45cd-91a7-ff5e26647473" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C16_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6b4db725-0f46-45cd-91a7-ff5e26647473"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp161_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS180" metaid="_8292c076-d98f-4659-abf8-5aea04f19a2e" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8292c076-d98f-4659-abf8-5aea04f19a2e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_palmACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3ooctdACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR4b" metaid="_1fce80bd-1ea0-4dbf-923e-87f0e18742da" name="R_RNDR4b" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013020 AND XFCFBP8418_023110 AND XFCFBP8418_023120</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1fce80bd-1ea0-4dbf-923e-87f0e18742da"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013020"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dudp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS181" metaid="f6607936-32c2-4e46-ad0a-30d824da2f35" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.179</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f6607936-32c2-4e46-ad0a-30d824da2f35"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.179"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ocvac11eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_inost_e" metaid="_0aedf89d-8a96-4cfa-92a3-6eb5f2053277" name="R_EX_inost_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0aedf89d-8a96-4cfa-92a3-6eb5f2053277"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_inost_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MAN6PI" metaid="_7dbe2ce6-db32-4f7e-bc6e-b3f2ddf43e5c" name="mannose_6_phosphate_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026210</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.3.1.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7dbe2ce6-db32-4f7e-bc6e-b3f2ddf43e5c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_man6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHAPT" metaid="_5dde2c9f-2b10-4b58-a131-233066c88570" name="R_DHAPT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.121</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5dde2c9f-2b10-4b58-a131-233066c88570"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.121"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dha_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASADH" metaid="_5b379ec5-d580-42e2-b908-5cb20646ef45" name="R_ASADH" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003880</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 1.2.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5b379ec5-d580-42e2-b908-5cb20646ef45"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003880"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4pasp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_aspsa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MALDt2_2tex" metaid="f545ce1c-e54a-4c5b-8a49-c502345c9345" name="R_MALDt2_2tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f545ce1c-e54a-4c5b-8a49-c502345c9345"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mal_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mal_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MALCOAMT" metaid="_4f14dd11-4111-46fe-b081-74f31fa49336" name="Malonyl_CoA_methyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000200 ) OR ( XFCFBP8418_001720 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.197</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4f14dd11-4111-46fe-b081-74f31fa49336"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.197"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000200"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_malcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malcoame_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PGtex" metaid="_44c99b45-18a0-45ae-8d1d-c1b1c42b96c8" name="glycerophoglycerol_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_44c99b45-18a0-45ae-8d1d-c1b1c42b96c8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3pg_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3pg_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DPR" metaid="_9a68ad4c-d4cd-4ce0-9f53-966e0013be3e" name="2_dehydropantoate_2_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.169</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a68ad4c-d4cd-4ce0-9f53-966e0013be3e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.169"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2dhp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pant_R_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLU5K" metaid="b8b1436a-57d8-458d-b9e0-94f26f27e260" name="glutamate_5_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025230</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.7.2.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b8b1436a-57d8-458d-b9e0-94f26f27e260"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.2.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025230"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AIRC2r" metaid="_6645cf46-919f-486a-9823-6781d9cfbbb6" name="phosphoribosylaminoimidazole_carboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013030</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6645cf46-919f-486a-9823-6781d9cfbbb6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_air_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hco3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5caiz_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ATHRDHr" metaid="_7e3a7053-fb8e-4b36-b54f-dd6fdb04058e" name="R_ATHRDHr" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015390</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.381</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7e3a7053-fb8e-4b36-b54f-dd6fdb04058e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.381"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_athr_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2aobut_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROt2rpp" metaid="_9bd00da5-d6af-4066-9645-33a888f9bbcd" name="L_proline_reversible_transport_via_proton_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9bd00da5-d6af-4066-9645-33a888f9bbcd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pro_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GHMT2r" metaid="da8d0d51-de92-452f-a95b-e3db2099f067" name="glycine_hydroxymethyltransferase__reversible" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 2.1.2.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#da8d0d51-de92-452f-a95b-e3db2099f067"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_QUIN2tpp" metaid="d71079b3-0b61-482c-80db-53375e0430ac" name="R_QUIN2tpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d71079b3-0b61-482c-80db-53375e0430ac"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_quin_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_quin_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SHSL1r" metaid="f530f847-db22-43d3-9d16-6d7eac17354a" name="R_SHSL1r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010590</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 2.5.1.48</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f530f847-db22-43d3-9d16-6d7eac17354a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.48"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_suchms_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cyst_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RBFK" metaid="_0821679d-8246-41fd-bba1-6ce3a40d8b18" name="riboflavin_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004690</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.26</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0821679d-8246-41fd-bba1-6ce3a40d8b18"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.26"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ribflv_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR3b" metaid="_43142d0a-9eef-49e5-b7f0-e37c0a16a8eb" name="R_RNDR3b" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013020 AND XFCFBP8418_023110 AND XFCFBP8418_023120</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_43142d0a-9eef-49e5-b7f0-e37c0a16a8eb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013020"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dcdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TMPPP" metaid="_0ec55137-23f5-4f3f-9112-d6bd2eafdea0" name="thiamine_phosphate_diphosphorylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_008540</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ec55137-23f5-4f3f-9112-d6bd2eafdea0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2mahmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4mpetz_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thmmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DSBAO1" metaid="_5c0b1182-02bb-4720-beb4-03400b842a82" name="DsbA_protein_reoxidation_reaction__aerobic_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_003290 AND XFCFBP8418_008810 ) OR ( XFCFBP8418_003300 AND XFCFBP8418_008810 )</p> + <p>SUBSYSTEM: Protein_disulfide_bond_transfer</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5c0b1182-02bb-4720-beb4-03400b842a82"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008810"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003300"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008810"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003290"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbard_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbaox_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_4abut_e" metaid="_0a49bcd6-eff9-41d0-bd80-27d644965d83" name="R_EX_4abut_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0a49bcd6-eff9-41d0-bd80-27d644965d83"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_4abut_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FCLT" metaid="_8eb1d4bb-b1c1-44fb-81f9-ebed8b74488d" name="Ferrochelatase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006790</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.99.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8eb1d4bb-b1c1-44fb-81f9-ebed8b74488d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.99.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppp9_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pheme_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HSK" metaid="_9940ff69-7b6c-4680-8a6c-988340fcd018" name="homoserine_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020370</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 2.7.1.39</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9940ff69-7b6c-4680-8a6c-988340fcd018"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.39"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hom_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_phom_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRAr" metaid="_76b3b033-d489-453c-bb92-fa7bfd1b43ff" name="Threonine_Aldolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 4.1.2.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76b3b033-d489-453c-bb92-fa7bfd1b43ff"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thr_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acald_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADSL2r" metaid="dacd9565-cac8-43a7-b468-bae13439ab04" name="adenylosuccinate_lyase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002120</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 4.3.2.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dacd9565-cac8-43a7-b468-bae13439ab04"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.2.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002120"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_25aics_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_aicar_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PGabcpp" metaid="_44db3cb0-b678-4dc7-81ca-28d8e338ea64" name="sn_glycerol_3_phosphoglycerol_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_44db3cb0-b678-4dc7-81ca-28d8e338ea64"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pg_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3pg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_O16A4COLIPAabctex" metaid="b12703fa-9481-407c-82ac-92105fd00866" name="R_O16A4COLIPAabctex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003500 AND XFCFBP8418_003510 AND XFCFBP8418_015320 AND XFCFBP8418_015330</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b12703fa-9481-407c-82ac-92105fd00866"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015320"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_OLPS_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_OLPS_XF_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUtex" metaid="cc285548-4649-4d25-9a09-e6c71c2f1135" name="L_glutamate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cc285548-4649-4d25-9a09-e6c71c2f1135"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROT_cp_LesA" metaid="c7216a2f-75d2-418a-8595-9227e9080418" name="R_PROT_cp_LesA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002410 AND XFCFBP8418_002430 AND XFCFBP8418_002450 AND XFCFBP8418_002490 AND XFCFBP8418_002510 AND XFCFBP8418_007090 AND XFCFBP8418_007140 AND XFCFBP8418_008580 AND XFCFBP8418_009650 AND XFCFBP8418_014460</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c7216a2f-75d2-418a-8595-9227e9080418"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002490"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002430"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008580"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002410"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007140"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009650"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002450"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="601"/> + <speciesReference constant="true" species="M_LesA_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="601"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="601"/> + <speciesReference constant="true" species="M_LesA_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="601"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR2b" metaid="_6e54d580-b45a-4013-a358-079027932d74" name="R_RNDR2b" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013020 AND XFCFBP8418_023110 AND XFCFBP8418_023120</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6e54d580-b45a-4013-a358-079027932d74"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013020"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dgdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_pyr_e" metaid="_8633901e-e762-4406-8ebb-b58c3f6c6f92" name="R_EX_pyr_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8633901e-e762-4406-8ebb-b58c3f6c6f92"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS160" metaid="a3fabda9-649f-4736-b7fa-28241c5853c0" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a3fabda9-649f-4736-b7fa-28241c5853c0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_myrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3opalmACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DSERDHr" metaid="_59ad4187-4ef2-4171-90b9-234bbc54fcee" name="R_DSERDHr" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015390</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.276</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_59ad4187-4ef2-4171-90b9-234bbc54fcee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.276"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2amsa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS161" metaid="d9fd717c-9da8-4cd7-b257-1e48b23ee048" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d9fd717c-9da8-4cd7-b257-1e48b23ee048"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3ocpalm9eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRATPP" metaid="_7bab06b3-5f10-46bc-8921-b52ca4efaa68" name="phosphoribosyl_ATP_pyrophosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020260</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 3.6.1.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7bab06b3-5f10-46bc-8921-b52ca4efaa68"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prbatp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prbamp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_URAt2pp" metaid="c689780f-6291-4a49-8606-befea4ef9449" name="R_URAt2pp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c689780f-6291-4a49-8606-befea4ef9449"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ura_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ura_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GP4GH" metaid="_537a438f-16d9-4cc6-9519-85c84364ff69" name="Gp4G_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019500</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_537a438f-16d9-4cc6-9519-85c84364ff69"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019500"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gp4g_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPK2r" metaid="_0bae4037-a747-4a55-97f0-2d9c35812403" name="polyphosphate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012370</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 2.7.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0bae4037-a747-4a55-97f0-2d9c35812403"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAPE" metaid="_29a03fd9-aefc-4f79-b029-e69b46c520e5" name="diaminopimelate_epimerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002870</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 5.1.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_29a03fd9-aefc-4f79-b029-e69b46c520e5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_26dap_LL_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_26dap_M_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OAAtex" metaid="b07ccf1c-e5f0-4e1a-aec2-8e9ad696935f" name="R_OAAtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b07ccf1c-e5f0-4e1a-aec2-8e9ad696935f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_oaa_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_oaa_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ORPT" metaid="f9ef6e07-c2be-48b1-a3a1-3bf83ffd1efd" name="orotate_phosphoribosyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015470</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 2.4.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f9ef6e07-c2be-48b1-a3a1-3bf83ffd1efd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015470"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_orot5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_orot_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROtex" metaid="_9d708f07-47a2-4900-8f78-559008fb3911" name="L_proline_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d708f07-47a2-4900-8f78-559008fb3911"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pro_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pro_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE120abcpp" metaid="_3a7b34bd-9273-4389-9723-727fa652ce82" name="phosphatidylethanolamine_transport_via_ABC_system__n_C12_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3a7b34bd-9273-4389-9723-727fa652ce82"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe120_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP180pp" metaid="c35596c4-e315-4b33-a091-de5a0f92068b" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c35596c4-e315-4b33-a091-de5a0f92068b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp180_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg180_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_mobd_e" metaid="_20930448-937b-4cf1-ab3f-ecc08d62f091" name="R_EX_mobd_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_20930448-937b-4cf1-ab3f-ecc08d62f091"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_mobd_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR1b" metaid="b9cad4e8-4536-4eec-8c2e-6d989419fe0e" name="R_RNDR1b" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013020 AND XFCFBP8418_023110 AND XFCFBP8418_023120</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b9cad4e8-4536-4eec-8c2e-6d989419fe0e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013020"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UPPDC1" metaid="bbf72941-8f9c-476d-88dc-ce5e8f3cc3f2" name="uroporphyrinogen_decarboxylase__uroporphyrinogen_III_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004180</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.37</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bbf72941-8f9c-476d-88dc-ce5e8f3cc3f2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.37"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uppg3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cpppg3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="4"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PYRt2rpp" metaid="_67a005e1-64b1-49b1-a087-618c55348f69" name="pyruvate_reversible_transport_via_proton_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_67a005e1-64b1-49b1-a087-618c55348f69"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_T2DECAI" metaid="_5f6dd7c4-e043-4833-ae2f-ccd001b942a8" name="trans_2_decenoyl_ACP_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006750</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f6dd7c4-e043-4833-ae2f-ccd001b942a8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tdec2eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cdec3eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADSL1r" metaid="c79adf30-efb3-4c5b-ab16-e56fe3a29df1" name="adenylsuccinate_lyase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002120</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 4.3.2.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c79adf30-efb3-4c5b-ab16-e56fe3a29df1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.2.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002120"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dcamp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHNPA2" metaid="_9e213471-7d57-43b4-ad83-a49b7090064d" name="dihydroneopterin_aldolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007450</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.2.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9e213471-7d57-43b4-ad83-a49b7090064d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007450"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhnpt_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_6hmhpt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gcald_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OMMBLHX" metaid="b915eb59-4fc6-4502-ab13-9ac3eb413803" name="2_Octaprenyl_3_methyl_6_methoxy_1_4_benzoquinol_hydroxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010940</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b915eb59-4fc6-4502-ab13-9ac3eb413803"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010940"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ommbl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="0.5"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2omhmbl_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSSADS" metaid="_9d0218c9-f286-40a8-b0ed-f09b4a88786a" name="R_CYSSADS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002960</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 4.1.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d0218c9-f286-40a8-b0ed-f09b4a88786a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3sala_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_so2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MEOHtex" metaid="f8f0a2d0-bbae-4aa8-9861-728f3528ccc0" name="Methanol_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f8f0a2d0-bbae-4aa8-9861-728f3528ccc0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_meoh_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_meoh_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MG2tpp" metaid="_468c5216-dda7-4ea0-a1be-6d9beafa5192" name="magnesium___2__transport_in_via_diffusion" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010210</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_468c5216-dda7-4ea0-a1be-6d9beafa5192"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mg2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mg2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE140abcpp" metaid="_1c8a405f-6f2b-4349-89a5-74b3a30b1631" name="phosphatidylethanolamine_transport_via_ABC_system__n_C14_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1c8a405f-6f2b-4349-89a5-74b3a30b1631"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe140_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HISTRS" metaid="cf58a71b-ee9b-4e1d-b6bf-7b0e5b537f32" name="Histidyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020350</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cf58a71b-ee9b-4e1d-b6bf-7b0e5b537f32"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnahis_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_his_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_histrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGDCpp" metaid="e5dcc1c1-e648-428d-86dd-7d5bb7df0e6e" name="R_ARGDCpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015380</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 4.1.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e5dcc1c1-e648-428d-86dd-7d5bb7df0e6e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_arg_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_agm_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS140" metaid="f9183968-aad1-4479-871e-85f5ddcce669" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f9183968-aad1-4479-871e-85f5ddcce669"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ddcaACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3omrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OPHHX" metaid="_3f44626a-4910-45ac-86fa-da92802e5d01" name="2_Octaprenylphenol_hydroxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017800</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3f44626a-4910-45ac-86fa-da92802e5d01"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2oph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="0.5"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ohph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS141" metaid="_0ec69bdf-88ce-465f-9218-2538ee9ad8d1" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ec69bdf-88ce-465f-9218-2538ee9ad8d1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cddec5eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ocmrs7eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR180x" metaid="_3bfc5d63-2c65-4b18-acba-50fc84cb20b6" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3bfc5d63-2c65-4b18-acba-50fc84cb20b6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_toctd2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KDOCT2" metaid="_3d706d9f-080e-4204-ae23-70f909a44e8b" name="3_deoxy_manno_octulosonate_cytidylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019240</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.38</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d706d9f-080e-4204-ae23-70f909a44e8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.38"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ckdo_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR2" metaid="_79aeb888-3830-43ed-9cc4-cc33e236b38e" name="ribonucleoside_diphosphate_reductase__GDP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_023110 AND XFCFBP8418_023120 ) OR ( XFCFBP8418_013260 AND XFCFBP8418_023110 AND XFCFBP8418_023120 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79aeb888-3830-43ed-9cc4-cc33e236b38e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dgdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR1" metaid="b3219740-d050-4774-a42b-f624af5ded79" name="ribonucleoside_diphosphate_reductase__ADP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_023110 AND XFCFBP8418_023120 ) OR ( XFCFBP8418_013260 AND XFCFBP8418_023110 AND XFCFBP8418_023120 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b3219740-d050-4774-a42b-f624af5ded79"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FMETTRS" metaid="a2feb2dc-03c1-4e58-b8cc-f958156cc5ef" name="Methionyl_tRNA_formyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009950</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 2.1.2.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a2feb2dc-03c1-4e58-b8cc-f958156cc5ef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mettrna_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fmettrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SPODM" metaid="_044de510-3507-4d74-8e62-1e1e87019bd4" name="superoxide_dismutase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012590</p> + <p>SUBSYSTEM: Superoxide_radicals_degradation</p> + <p>EC_NUMBER: 1.15.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_044de510-3507-4d74-8e62-1e1e87019bd4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.15.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2s_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD11" metaid="_6e7c9853-0f50-49ff-8fbb-bb6eb66501fe" name="5__nucleotidase__IMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6e7c9853-0f50-49ff-8fbb-bb6eb66501fe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ins_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD10" metaid="e4bb43b8-b699-46df-9320-8e53cae7b56f" name="5__nucleotidase__XMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e4bb43b8-b699-46df-9320-8e53cae7b56f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xtsn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR4" metaid="_896b0e63-5634-4dcf-9958-674ac77696c7" name="ribonucleoside_diphosphate_reductase__UDP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_023110 AND XFCFBP8418_023120 ) OR ( XFCFBP8418_013260 AND XFCFBP8418_023110 AND XFCFBP8418_023120 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_896b0e63-5634-4dcf-9958-674ac77696c7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dudp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR3" metaid="cd2264e5-2cbb-4db6-ad9d-c07c43bcd14e" name="ribonucleoside_diphosphate_reductase__CDP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_023110 AND XFCFBP8418_023120 ) OR ( XFCFBP8418_013260 AND XFCFBP8418_023110 AND XFCFBP8418_023120 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd2264e5-2cbb-4db6-ad9d-c07c43bcd14e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dcdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD12" metaid="_5d330281-1b50-41c2-bc1c-73ce1a42e5e7" name="5__nucleotidase__dIMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5d330281-1b50-41c2-bc1c-73ce1a42e5e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dimp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_din_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAAGDS" metaid="_03a62112-53cb-40a6-a5e6-9c48a58b81f1" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamyl_meso_2_6_diaminopimelate_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011300</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_03a62112-53cb-40a6-a5e6-9c48a58b81f1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011300"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uamag_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_26dap_M_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ugmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDEP3pp" metaid="_48f0e7d9-7db2-4279-8c7e-bf92bf1db331" name="murein_D_D_endopeptidase__murein5px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_48f0e7d9-7db2-4279-8c7e-bf92bf1db331"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5p4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NH4tex" metaid="_248b94d3-106d-4470-8cca-3f6f228bbc8a" name="ammonia_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_248b94d3-106d-4470-8cca-3f6f228bbc8a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nh4_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD121" metaid="_1d7ccf88-33dd-446c-bcea-f99ba152f541" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C12_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1d7ccf88-33dd-446c-bcea-f99ba152f541"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hcddec5eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_t3c5ddeceACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD120" metaid="_22084632-d9f6-40cb-b58f-2e5f42d8c8ad" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_22084632-d9f6-40cb-b58f-2e5f42d8c8ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hddecACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tddec2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_COBALT2tpp" metaid="_71a1ba76-5e3a-4113-a1dc-f3d98c0bbe94" name="cobalt_transport_in_via_permease__no_H__" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010210</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_71a1ba76-5e3a-4113-a1dc-f3d98c0bbe94"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cobalt2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cobalt2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OROTt2_2pp" metaid="_9b8a138c-ca3d-4dcd-b4a2-4e283339ac74" name="Orotate_transport_via_proton_symport__2_H___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025480</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b8a138c-ca3d-4dcd-b4a2-4e283339ac74"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orot_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orot_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MN2t3pp" metaid="_31e36b04-fa1f-40e4-9738-d89a6765dd6b" name="manganese__Mn_2__transport_out_via_proton_antiport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010570</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_31e36b04-fa1f-40e4-9738-d89a6765dd6b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mn2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mn2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NADK" metaid="cd65e5b8-65f7-46b4-8e78-3659cbd30a6a" name="NAD_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_027970</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.9.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd65e5b8-65f7-46b4-8e78-3659cbd30a6a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.9.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027970"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METDtex" metaid="_4238a353-d6cb-4a6c-a9ac-5f3e78809b5e" name="R_METDtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4238a353-d6cb-4a6c-a9ac-5f3e78809b5e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_met_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_met_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALATA_D2" metaid="_0a5e00e9-af40-4141-80c6-64e6817c3fbf" name="D_alanine_transaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0a5e00e9-af40-4141-80c6-64e6817c3fbf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pydx5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyam5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EPSsynthXF" metaid="_79e373ae-ac1a-4360-8bcb-89a7d0543645" name="R_EPSsynthXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021400 AND XFCFBP8418_021410 AND XFCFBP8418_021440 AND XFCFBP8418_021450 AND XFCFBP8418_021460</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79e373ae-ac1a-4360-8bcb-89a7d0543645"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021410"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021400"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021450"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021440"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udpgalur_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_gdpmann_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_EPS_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ORNTA" metaid="d5102a3c-3a3c-434a-94d0-8b96be75b928" name="ornithine_transaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003360</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 2.6.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d5102a3c-3a3c-434a-94d0-8b96be75b928"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu5sa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PMANM" metaid="e7613bec-6717-43e5-9a04-e731c28b552d" name="phosphomannomutase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026200</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.4.2.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e7613bec-6717-43e5-9a04-e731c28b552d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_man1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_man6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SDPTA" metaid="c1b371a7-cf60-4264-b23e-ed786ad87c66" name="succinyldiaminopimelate_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003360</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c1b371a7-cf60-4264-b23e-ed786ad87c66"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sl26da_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sl2a6o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MANptspp" metaid="f6e61095-8bae-4dd9-977a-512e79a6565e" name="R_MANptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f6e61095-8bae-4dd9-977a-512e79a6565e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_man_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_man6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALAt2tex" metaid="_96deabb3-b15e-44dc-9b44-fe6777fd975d" name="R_ALAt2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96deabb3-b15e-44dc-9b44-fe6777fd975d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR181x" metaid="_8bccbcf3-e7bf-473f-ae20-36fee6e62c8f" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8bccbcf3-e7bf-473f-ae20-36fee6e62c8f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c11vaceACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_octeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSTS" metaid="_61b6ac42-738f-4dbc-a0de-595026000983" name="R_CYSTS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006490</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 4.2.1.22</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_61b6ac42-738f-4dbc-a0de-595026000983"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.22"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006490"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hcys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cyst_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM4PCPpp" metaid="_2b90323d-3699-41a8-8135-de16322f7fe3" name="R_AGM4PCPpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 3.4.17.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2b90323d-3699-41a8-8135-de16322f7fe3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP141abcpp" metaid="e4cac7b1-addf-4094-86dd-5626f799b1e7" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C14_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e4cac7b1-addf-4094-86dd-5626f799b1e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp141_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MCOATA" metaid="_34b4986a-38cf-4f0e-b0ff-ac946164acd4" name="Malonyl_CoA_ACP_transacylase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_005920</p> + <p>SUBSYSTEM: Membrane_Lipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.39</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34b4986a-38cf-4f0e-b0ff-ac946164acd4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.39"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005920"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_malcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRMICI" metaid="_4a139dd6-6b1f-42a3-80fa-c1a652f92f40" name="1__5_phosphoribosyl__5___5_phosphoribosylamino_methylideneamino_imidazole_4_carboxamide_isomerase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020280</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 5.3.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a139dd6-6b1f-42a3-80fa-c1a652f92f40"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020280"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_prfp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_prlp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRFGS" metaid="ae9884a2-12e6-45c1-a0b3-eb9c374952fe" name="phosphoribosylformylglycinamidine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003400</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.5.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae9884a2-12e6-45c1-a0b3-eb9c374952fe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.5.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003400"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fgam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fpram_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UBQBM" metaid="f9dec702-3dc6-451a-aba0-3f7b5574765e" name="ubiquinone_biosynthesis_monooxygenase_Coq7" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002280</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.14.13.-</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f9dec702-3dc6-451a-aba0-3f7b5574765e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.13.-"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002280"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2hpmhobq_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2hp6mobq_me_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHQD" metaid="_79202ee9-17eb-4a25-8b3d-0aba67bfb05b" name="3_dehydroquinate_dehydratase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014540</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79202ee9-17eb-4a25-8b3d-0aba67bfb05b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3dhq_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3dhsk_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDPGDC" metaid="_714296ef-25a8-4a7e-8a7d-9b785ef36d1b" name="R_UDPGDC" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006440</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.305</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_714296ef-25a8-4a7e-8a7d-9b785ef36d1b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.305"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpglcur_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpLa4o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALAR" metaid="f41507bb-f146-4e38-a834-64dc68ceed40" name="alanine_racemase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010700</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 5.1.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f41507bb-f146-4e38-a834-64dc68ceed40"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010700"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDCPPtppi" metaid="_43042d06-07b1-4ee3-9e5a-e3da8c996d33" name="undecaprenyl_phosphate_transport__cytoplasm_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_43042d06-07b1-4ee3-9e5a-e3da8c996d33"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpp_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udcpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP2" metaid="_00f0b404-4433-4991-b1ea-6ba5460196bd" name="R_NTPP2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_015800 ) OR ( XFCFBP8418_023820 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00f0b404-4433-4991-b1ea-6ba5460196bd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023820"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP1" metaid="_6404b198-63b5-426c-a670-f1f20da40309" name="R_NTPP1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_015800 ) OR ( XFCFBP8418_023820 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6404b198-63b5-426c-a670-f1f20da40309"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023820"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dgtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dgmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHTNDA2" metaid="_1f4c0b90-0cb9-448e-ba07-43b65152c5a9" name="R_CHTNDA2" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021670</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.5.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1f4c0b90-0cb9-448e-ba07-43b65152c5a9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021670"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_chitos_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPTRS" metaid="cece8e95-5d53-4e5d-b26e-419e911c3979" name="Aspartyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_016880</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cece8e95-5d53-4e5d-b26e-419e911c3979"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016880"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaasp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_asptrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_glc_D_e" metaid="d8bc6d91-13e2-422c-ad0b-731ac272e030" name="R_EX_glc_D_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d8bc6d91-13e2-422c-ad0b-731ac272e030"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRAI" metaid="_0b7be11a-f50b-43a9-88c3-8f0bf41f3c55" name="phosphoribosylanthranilate_isomerase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026720</p> + <p>SUBSYSTEM: Tyrosine__tryptophan__and_phenylalanine_metabolism</p> + <p>EC_NUMBER: 5.3.1.24</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b7be11a-f50b-43a9-88c3-8f0bf41f3c55"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.24"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pran_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2cpr5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MSO3abcpp" metaid="_677c2f8c-7961-4be8-b1d7-5a0b60fb21a8" name="methanesulfonate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007680 ) OR ( XFCFBP8418_009840 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_677c2f8c-7961-4be8-b1d7-5a0b60fb21a8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009840"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mso3_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mso3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHQS" metaid="c8451369-a3cb-451c-a1ab-747dc7433c89" name="3_dehydroquinate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004170</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.3.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c8451369-a3cb-451c-a1ab-747dc7433c89"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.3.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2dda7p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3dhq_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE140" metaid="cfb3384a-9b94-4fd2-ba77-9cd1ab312909" name="R_FACOAE140" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cfb3384a-9b94-4fd2-ba77-9cd1ab312909"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tdcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ttdca_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_5DGLCNR" metaid="_8e3baeca-0b92-41fd-98d5-bf72e1a03b07" name="5_dehydro_D_gluconate_reductase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.1.1.69</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8e3baeca-0b92-41fd-98d5-bf72e1a03b07"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.69"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5dglcn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glcn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE141" metaid="_9af9b25b-0657-4114-b578-efca4a85f6a7" name="R_FACOAE141" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9af9b25b-0657-4114-b578-efca4a85f6a7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdecoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ttdcea_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NAMNPP" metaid="_829a24cf-0b33-4fb2-af68-514ec3e938ae" name="R_NAMNPP" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024030</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_829a24cf-0b33-4fb2-af68-514ec3e938ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nicrnt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GDPTPDP" metaid="_01138718-ee8e-47e9-b1f4-f8562732613d" name="guanosine_3_diphosphate_5_triphosphate_3_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_008750</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.7.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01138718-ee8e-47e9-b1f4-f8562732613d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.7.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdptp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD100" metaid="d9b5e3b1-62f4-42c4-867c-c89d6e183f6b" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C10_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d9b5e3b1-62f4-42c4-867c-c89d6e183f6b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hdecACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tdec2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_COLIPAabcpp" metaid="_4af05ec1-1bed-4aba-a2cb-d0dbf9ec9c36" name="core_oligosaccharide_lipid_A_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4af05ec1-1bed-4aba-a2cb-d0dbf9ec9c36"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL161t2pp" metaid="a06a1dff-b332-4665-882d-c20f8bafdd8f" name="fatty_acid_CoA_ligase__hexadecenoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a06a1dff-b332-4665-882d-c20f8bafdd8f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdcea_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RIBtex" metaid="_4ddf94c1-6b92-40b8-aa6a-bdd0d4400dc5" name="R_RIBtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4ddf94c1-6b92-40b8-aa6a-bdd0d4400dc5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_rib_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_rib_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_gln_L_e" metaid="_597c5adc-db49-44d2-94f1-b67ad04a0da4" name="R_EX_gln_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_597c5adc-db49-44d2-94f1-b67ad04a0da4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_gln_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OTOTt2_2tex" metaid="a210e18a-5994-4374-94bd-72287fee0ca0" name="R_OTOTt2_2tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a210e18a-5994-4374-94bd-72287fee0ca0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orot_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orot_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_ADE" metaid="b3e3b004-8105-4516-a6e1-7f94dcafe766" name="R_DM_ADE" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b3e3b004-8105-4516-a6e1-7f94dcafe766"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ade_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OMPDC" metaid="d93dc4e1-edfc-4c32-85ab-7653f4ed523a" name="orotidine_5__phosphate_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014470</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d93dc4e1-edfc-4c32-85ab-7653f4ed523a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014470"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orot5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CCGS" metaid="aeefd093-9780-4f3a-a4bc-c4b1b159b5ce" name="7_cyano_7_carbaguanine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_016870</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#aeefd093-9780-4f3a-a4bc-c4b1b159b5ce"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_preq0_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TSULtex" metaid="ec927e32-cf1d-4c73-918a-72f5029322db" name="thiosulfate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ec927e32-cf1d-4c73-918a-72f5029322db"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tsul_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tsul_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DATPHs" metaid="_2b1cac90-06fb-4bc4-b049-4dd1f620efa8" name="R_DATPHs" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2b1cac90-06fb-4bc4-b049-4dd1f620efa8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_datp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ditp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PTRCt2pp" metaid="e78db6cd-0657-4fea-8f01-81c6ec2b22c9" name="putrescine_transport_in_via_proton_symport" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_020210 ) OR ( XFCFBP8418_020220 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e78db6cd-0657-4fea-8f01-81c6ec2b22c9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020210"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020220"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ptrc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ptrc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACMAMUT" metaid="e95f5e68-9ab6-4458-a480-f20dfe2db6e7" name="R_ACMAMUT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021400</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.4.1.180</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e95f5e68-9ab6-4458-a480-f20dfe2db6e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.180"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021400"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_unaga_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uacmamu_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_unagamu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EGMEACPR" metaid="_67a233e0-d4ee-4dc9-942d-b1e17c4c40db" name="Enoylglutaryl__ACP__methyl_ester_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_67a233e0-d4ee-4dc9-942d-b1e17c4c40db"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_egmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOXR2" metaid="_96cc1688-4359-4703-84b6-1435cb691796" name="L_methionine_R_sulfoxide_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010720 AND XFCFBP8418_013260</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 1.8.4.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96cc1688-4359-4703-84b6-1435cb691796"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_metsox_R_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOXR1" metaid="_5df23b30-a3f6-4676-921e-54191df808b1" name="L_methionine_S_oxide_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000660 AND XFCFBP8418_013260</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 1.8.4.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5df23b30-a3f6-4676-921e-54191df808b1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000660"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_metsox_S_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EPStppXF" metaid="_5fb48694-ac9e-4ed6-b99d-173ee6449183" name="R_EPStppXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021420 AND XFCFBP8418_021460 AND XFCFBP8418_021480</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5fb48694-ac9e-4ed6-b99d-173ee6449183"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021480"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021460"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_EPS_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_EPS_XF_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KDOPS" metaid="fafc6c96-1fa9-43ae-9ec8-ef503665762a" name="3_deoxy__D_manno_octulosonic__acid_8_phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022230</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.55</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fafc6c96-1fa9-43ae-9ec8-ef503665762a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.55"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022230"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ara5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_kdo8p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLTGY3pp" metaid="_8c2d34c8-0575-45ca-9afa-b2bb6aa92508" name="murein_lytic_transglycosylase__murein3p3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_003940 ) OR ( XFCFBP8418_019770 )</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8c2d34c8-0575-45ca-9afa-b2bb6aa92508"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019770"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein3p3p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm3p_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_cit_e" metaid="_4102b033-7400-4144-a90c-dd4e3e8e846d" name="R_EX_cit_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4102b033-7400-4144-a90c-dd4e3e8e846d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_cit_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KDOPP" metaid="_3232385a-d5de-435f-91cd-5bc3226f132f" name="3_deoxy_manno_octulosonate_8_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003480</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.3.45</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3232385a-d5de-435f-91cd-5bc3226f132f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.45"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo8p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_kdo_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INS2D" metaid="_23902905-3c66-4f67-8f44-a07f6f2b556d" name="inositol_2_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.1.1.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_23902905-3c66-4f67-8f44-a07f6f2b556d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_inost_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2ins_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR160x" metaid="fb6781bf-f459-4e4d-9c02-b1ab55166450" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fb6781bf-f459-4e4d-9c02-b1ab55166450"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tpalm2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_palmACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUMt2_2pp" metaid="_9bfdf378-c0f2-4e54-baac-18954903679e" name="Fumarate_transport_via_proton_symport__2_H___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025480</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9bfdf378-c0f2-4e54-baac-18954903679e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fum_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTRLASE" metaid="_100a3131-464c-4fe3-8fbc-96b217be9163" name="nitrilase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004900</p> + <p>SUBSYSTEM: Nitrile_degradation</p> + <p>EC_NUMBER: 3.5.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_100a3131-464c-4fe3-8fbc-96b217be9163"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_ind3acnl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ind3ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Bztpp" metaid="_285c7944-ea46-46e8-a16c-61123969b4dc" name="R_Bztpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_285c7944-ea46-46e8-a16c-61123969b4dc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_bz_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_bz_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS60" metaid="_34b80282-f769-4dfd-ba18-8049c74ec799" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C6_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34b80282-f769-4dfd-ba18-8049c74ec799"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_butACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ohexACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE160" metaid="_72efae78-afaa-4b0f-9a5f-547547ffbf40" name="R_FACOAE160" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_72efae78-afaa-4b0f-9a5f-547547ffbf40"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pmtcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hdca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ATPM" metaid="_4185d916-7cbb-46e0-adea-86c5eacb2919" name="R_ATPM" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Biomass_and_maintenance_functions</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4185d916-7cbb-46e0-adea-86c5eacb2919"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METabcpp" metaid="_00d49cea-7b15-48c0-bf8b-d807fb1545ac" name="L_methionine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010500 AND XFCFBP8418_010510 AND XFCFBP8418_010520</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00d49cea-7b15-48c0-bf8b-d807fb1545ac"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010520"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CA2tpp" metaid="_8a8e45aa-9098-4c26-a506-006e63380941" name="R_CA2tpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8a8e45aa-9098-4c26-a506-006e63380941"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ca2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ca2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE161" metaid="_366b4b50-2bdd-4dbf-95b4-4182b08ec755" name="R_FACOAE161" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_366b4b50-2bdd-4dbf-95b4-4182b08ec755"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdcoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hdcea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ME2" metaid="e38276c1-2ba0-4f9f-a4c3-3f01ca1a8cc3" name="malic_enzyme__NADP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025470</p> + <p>SUBSYSTEM: Anaplerotic_Reactions</p> + <p>EC_NUMBER: 1.1.1.40</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e38276c1-2ba0-4f9f-a4c3-3f01ca1a8cc3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.40"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025470"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mal_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SERabcpp" metaid="_9dd1c7b0-5fe9-488f-895a-52c4f7706186" name="R_SERabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9dd1c7b0-5fe9-488f-895a-52c4f7706186"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHAD2" metaid="b47e0de9-8e54-4c25-9acb-8fa599657aa4" name="Dihydroxy_acid_dehydratase__2_3_dihydroxy_3_methylpentanoate_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014980</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b47e0de9-8e54-4c25-9acb-8fa599657aa4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_23dhmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3mop_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UPP3S" metaid="_0b5f9b39-03a1-424b-a3d8-378a01607d24" name="uroporphyrinogen_III_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.75</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b5f9b39-03a1-424b-a3d8-378a01607d24"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.75"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018150"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hmbil_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uppg3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FLVR" metaid="_323efc0c-f6dc-4c47-9449-08a6f6e35350" name="R_FLVR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002700 AND XFCFBP8418_002710</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.5.1.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_323efc0c-f6dc-4c47-9449-08a6f6e35350"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002710"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002700"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ribflv_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rbflvrd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHAD1" metaid="_77cebed7-605b-47bd-a764-4b13caba5e3c" name="dihydroxy_acid_dehydratase__2_3_dihydroxy_3_methylbutanoate_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014980</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_77cebed7-605b-47bd-a764-4b13caba5e3c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_23dhmb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3mob_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NADS2" metaid="_99c270f2-750c-4259-b953-d14e2c9425e3" name="NAD_synthase__glutamine_hydrolysing_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_99c270f2-750c-4259-b953-d14e2c9425e3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dnad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SPS" metaid="_51b0db8a-aa4b-4a35-a77b-266a4ff17bfe" name="R_SPS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010390</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.4.1.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_51b0db8a-aa4b-4a35-a77b-266a4ff17bfe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_suc6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SEAHCYSHYD" metaid="_1c78443e-bf0c-4b1f-a8cb-2c48272a0288" name="Se_Adenosylselenohomocysteine_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024950</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.3.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1c78443e-bf0c-4b1f-a8cb-2c48272a0288"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.3.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_seahcys_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_selhcys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_U23GAATXF" metaid="_5ed5820f-384c-4032-a184-2e2bb929b8b9" name="R_U23GAATXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024880</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.191</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ed5820f-384c-4032-a184-2e2bb929b8b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.191"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024880"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hddecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_u3hga_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_u23ga_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDH" metaid="e8b66e0a-dc88-46b6-b724-c95e46904c14" name="malate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023000</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 1.1.1.37</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e8b66e0a-dc88-46b6-b724-c95e46904c14"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.37"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023000"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mal_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDSKXF" metaid="e05c0ff9-f3ee-44e4-ae6c-5a8af1fcdd02" name="R_TDSKXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024520</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.130</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e05c0ff9-f3ee-44e4-ae6c-5a8af1fcdd02"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.130"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024520"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_lipidAds_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lipidA_XF_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DPCOAK" metaid="_72098093-e1d9-4f34-a7c1-7fa433fa2788" name="dephospho_CoA_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011870</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.24</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_72098093-e1d9-4f34-a7c1-7fa433fa2788"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.24"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dpcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLTN2pp" metaid="_3a2cf021-2280-4af5-845b-33197249f1e9" name="gluconolactonase__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022170</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.1.1.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3a2cf021-2280-4af5-845b-33197249f1e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g15l_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glcn_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRabcpp" metaid="d6621e0d-c54a-4e88-9392-506216b82986" name="R_THRabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d6621e0d-c54a-4e88-9392-506216b82986"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thr_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thr_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYC2Pabcpp" metaid="d2c55c67-7451-45ff-b341-7488e1a4909a" name="sn_Glycerol_2_phosphate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d2c55c67-7451-45ff-b341-7488e1a4909a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc2p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc2p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSSr2" metaid="_36a33785-355e-44d9-b292-1c881970cfcb" name="R_CYSSr2" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006490 ) OR ( XFCFBP8418_010590 ) OR ( XFCFBP8418_010980 )</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 2.5.1.47</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_36a33785-355e-44d9-b292-1c881970cfcb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.47"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010590"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010980"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006490"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acser_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPA2" metaid="_7faf16e3-0feb-400d-8cdd-1c9c8f111457" name="inorganic_triphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_010630 ) OR ( XFCFBP8418_012360 )</p> + <p>SUBSYSTEM: Anaplerotic_Reactions</p> + <p>EC_NUMBER: 3.6.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7faf16e3-0feb-400d-8cdd-1c9c8f111457"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012360"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pppi_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_COLIPAabctex" metaid="_02c0cfcc-783a-4ca4-8d3e-31820d1f8dd9" name="R_COLIPAabctex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003500 AND XFCFBP8418_003510 AND XFCFBP8418_015320 AND XFCFBP8418_015330</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_02c0cfcc-783a-4ca4-8d3e-31820d1f8dd9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015320"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DMATT" metaid="_2aa97013-926a-4b5f-9998-5ed411e27b82" name="dimethylallyltranstransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005980</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2aa97013-926a-4b5f-9998-5ed411e27b82"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dmpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ipdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPt2_3pp" metaid="c4005074-397f-4200-9656-c1c1ff3a45de" name="R_ASPt2_3pp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c4005074-397f-4200-9656-c1c1ff3a45de"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_asp_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSTRS" metaid="c903eca2-cd93-4a27-b834-d0044c22820c" name="Cysteinyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025320</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c903eca2-cd93-4a27-b834-d0044c22820c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025320"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnacys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cystrna_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPGPPDP" metaid="_5e5254d2-8d42-429d-94f9-fac11e594eef" name="guanosine_3__5__bis_diphosphate__3__diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_008750</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.7.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5e5254d2-8d42-429d-94f9-fac11e594eef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.7.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppgpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR161x" metaid="_3766821c-aafe-44f0-bfee-3a2b6449de7f" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3766821c-aafe-44f0-bfee-3a2b6449de7f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c9palmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_pi_e" metaid="_572cf404-6cb2-432d-9834-ea31cca085e0" name="R_EX_pi_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_572cf404-6cb2-432d-9834-ea31cca085e0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_pi_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RFAMPtpp" metaid="d8ed4b2f-81a6-4b6c-bb5e-dbdf61b056f3" name="Rifampin_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d8ed4b2f-81a6-4b6c-bb5e-dbdf61b056f3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_rfamp_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rfamp_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK180" metaid="_68cf3dab-f648-4345-ad8b-80f10c25045f" name="diacylglycerol_kinase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_68cf3dab-f648-4345-ad8b-80f10c25045f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CITt10" metaid="c5c7be53-9be9-4db8-bea3-ef614b2faa48" name="R_CITt10" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025570</p> + <p>SUBSYSTEM: Transport</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5c7be53-9be9-4db8-bea3-ef614b2faa48"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cit_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_mg2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cit_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mg2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK181" metaid="_29e19ab5-e127-4ed0-a7bc-0a8d226d4b3e" name="diacylglycerol_kinase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_29e19ab5-e127-4ed0-a7bc-0a8d226d4b3e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_12dgr181_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GUAPRT" metaid="_8757a5bb-8bc0-4c66-8411-7747b3c46cad" name="guanine_phosphoribosyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021340</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.4.2.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8757a5bb-8bc0-4c66-8411-7747b3c46cad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gua_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G6PDA" metaid="_55f550d4-f869-44f9-a823-a6eb46a855aa" name="R_G6PDA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_55f550d4-f869-44f9-a823-a6eb46a855aa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gam6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CO2tpp" metaid="_592d5d7c-c23c-49c8-af79-69a9a21a2fda" name="CO2_transporter_via_diffusion__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_592d5d7c-c23c-49c8-af79-69a9a21a2fda"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_co2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IMPC" metaid="_7d0bf977-e0f9-4ab5-af73-71af1b9a3d62" name="IMP_cyclohydrolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001030</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 3.5.4.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7d0bf977-e0f9-4ab5-af73-71af1b9a3d62"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fprica_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IMPD" metaid="_72dca34a-c389-4260-9c38-045ec53ce65b" name="IMP_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004780</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.205</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_72dca34a-c389-4260-9c38-045ec53ce65b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.205"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004780"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR120tipp" metaid="_2f365b72-eab7-4293-8e61-d3977b9fa9bb" name="R_12DGR120tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2f365b72-eab7-4293-8e61-d3977b9fa9bb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr120_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr120_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MCTP1App" metaid="_1a4b0402-ae16-41d7-98d1-c957b449ea7f" name="murein_crosslinking_transpeptidase_1A__A2pm__D_ala___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004370 ) OR ( XFCFBP8418_008630 ) OR ( XFCFBP8418_010420 ) OR ( XFCFBP8418_011310 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1a4b0402-ae16-41d7-98d1-c957b449ea7f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004370"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011310"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTP5" metaid="b143a1d1-0d57-43a7-85d4-71709412e774" name="R_NTP5" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006890</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b143a1d1-0d57-43a7-85d4-71709412e774"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHDPRy" metaid="_77a79940-cd78-46f6-ab2d-c08956d165d6" name="dihydrodipicolinate_reductase__NADPH_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023980</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 1.17.1.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_77a79940-cd78-46f6-ab2d-c08956d165d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.1.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_23dhdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SUCD1" metaid="_9a77c6f3-76f5-4645-8c68-52b4ee104b38" name="succinate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024610 AND XFCFBP8418_024620 AND XFCFBP8418_024640</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 1.3.99.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a77c6f3-76f5-4645-8c68-52b4ee104b38"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024610"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024620"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024640"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HISTP" metaid="b1733f22-e0c4-4eb7-96f9-649bb21770c6" name="histidinol_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020300</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 3.1.3.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b1733f22-e0c4-4eb7-96f9-649bb21770c6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020300"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hisp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_histd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NMNDA" metaid="_61a7656c-7c46-4733-b4bd-1793d3d8fb5c" name="R_NMNDA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014880</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.5.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_61a7656c-7c46-4733-b4bd-1793d3d8fb5c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014880"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nicrnt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTP1" metaid="d3528cbd-6c40-449d-bba4-dd0cd8970553" name="R_NTP1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006890</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d3528cbd-6c40-449d-bba4-dd0cd8970553"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE180" metaid="ada0daac-03d6-4b7a-9282-497bb1c97f15" name="R_FACOAE180" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ada0daac-03d6-4b7a-9282-497bb1c97f15"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_stcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ocdca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XF_Biomass" metaid="_7225f85e-e5f6-4220-ad18-5b756a79b0ba" name="R_XF_Biomass" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Biomass_and_maintenance_functions</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7225f85e-e5f6-4220-ad18-5b756a79b0ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pe181_c" stoichiometry="0.007742407"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_pe160_c" stoichiometry="0.019313938"/> + <speciesReference constant="true" species="M_mobd_c" stoichiometry="7.37685E-6"/> + <speciesReference constant="true" species="M_spmd_c" stoichiometry="0.007535445"/> + <speciesReference constant="true" species="M_pe160_p" stoichiometry="0.049664413"/> + <speciesReference constant="true" species="M_pe181_p" stoichiometry="0.019909046"/> + <speciesReference constant="true" species="M_ni2_c" stoichiometry="0.000343024"/> + <speciesReference constant="true" species="M_thrtrna_c" stoichiometry="0.248213969"/> + <speciesReference constant="true" species="M_clpn160_p" stoichiometry="0.004598497"/> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="0.0002495333"/> + <speciesReference constant="true" species="M_murein3p3p_p" stoichiometry="0.001503009"/> + <speciesReference constant="true" species="M_chor_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_leutrna_c" stoichiometry="0.440920172"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_lipopb_c" stoichiometry="3.35193E-6"/> + <speciesReference constant="true" species="M_clpn181_p" stoichiometry="0.001843406"/> + <speciesReference constant="true" species="M_murein4p4p_p" stoichiometry="0.006012037"/> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_asptrna_c" stoichiometry="0.236169831"/> + <speciesReference constant="true" species="M_glutrna_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="0.00018715"/> + <speciesReference constant="true" species="M_dgtp_c" stoichiometry="0.03649201"/> + <speciesReference constant="true" species="M_cobalt2_c" stoichiometry="2.67411E-5"/> + <speciesReference constant="true" species="M_pydx5p_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_asntrna_c" stoichiometry="0.236169831"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="50.119554117"/> + <speciesReference constant="true" species="M_glntrna_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_phetrna_c" stoichiometry="0.181185724"/> + <speciesReference constant="true" species="M_cystrna_c" stoichiometry="0.089545546"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="4.99065E-5"/> + <speciesReference constant="true" species="M_pg160_c" stoichiometry="0.008913919"/> + <speciesReference constant="true" species="M_pg181_c" stoichiometry="0.003573336"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="0.007137104"/> + <speciesReference constant="true" species="M_so4_c" stoichiometry="0.004610532"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="0.000124766"/> + <speciesReference constant="true" species="M_valtrna_c" stoichiometry="0.414213606"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="0.000374299"/> + <speciesReference constant="true" species="M_murein4px4p_p" stoichiometry="0.006087187"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="0.013831597"/> + <speciesReference constant="true" species="M_zn2_c" stoichiometry="0.000362388"/> + <speciesReference constant="true" species="M_btn_c" stoichiometry="2.23462E-6"/> + <speciesReference constant="true" species="M_hemeO_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="50"/> + <speciesReference constant="true" species="M_pg181_p" stoichiometry="0.003062854"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="0.000311916"/> + <speciesReference constant="true" species="M_pg160_p" stoichiometry="0.007640488"/> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="6.1846E-5"/> + <speciesReference constant="true" species="M_mg2_c" stoichiometry="0.009221064"/> + <speciesReference constant="true" species="M_4fe4s_c" stoichiometry="0.000276632"/> + <speciesReference constant="true" species="M_glytrna_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_dttp_c" stoichiometry="0.032752791"/> + <speciesReference constant="true" species="M_pe161_c" stoichiometry="0.015021952"/> + <speciesReference constant="true" species="M_thmpp_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_protrna_c" stoichiometry="0.216270821"/> + <speciesReference constant="true" species="M_amet_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_sertrna_c" stoichiometry="0.211034239"/> + <speciesReference constant="true" species="M_pe161_p" stoichiometry="0.038627877"/> + <speciesReference constant="true" species="M_datp_c" stoichiometry="0.032752791"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="0.135598794"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="0.001996262"/> + <speciesReference constant="true" species="M_OLPS_XF_p" stoichiometry="9.503875E-5"/> + <speciesReference constant="true" species="M_alatrna_c" stoichiometry="0.502711835"/> + <speciesReference constant="true" species="M_iletrna_c" stoichiometry="0.284346382"/> + <speciesReference constant="true" species="M_lystrna_c" stoichiometry="0.33618854"/> + <speciesReference constant="true" species="M_succoa_c" stoichiometry="0.000109794"/> + <speciesReference constant="true" species="M_tyrtrna_c" stoichiometry="0.135103806"/> + <speciesReference constant="true" species="M_clpn161_p" stoichiometry="0.003576609"/> + <speciesReference constant="true" species="M_utp_c" stoichiometry="0.124906971"/> + <speciesReference constant="true" species="M_ribflv_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_dctp_c" stoichiometry="0.03649201"/> + <speciesReference constant="true" species="M_pg161_c" stoichiometry="0.006933048"/> + <speciesReference constant="true" species="M_ptrc_c" stoichiometry="0.037173471"/> + <speciesReference constant="true" species="M_murein3px4p_p" stoichiometry="0.000676354"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="0.146535029"/> + <speciesReference constant="true" species="M_trptrna_c" stoichiometry="0.055507765"/> + <speciesReference constant="true" species="M_mn2_c" stoichiometry="0.000734919"/> + <speciesReference constant="true" species="M_fe3_c" stoichiometry="0.008298958"/> + <speciesReference constant="true" species="M_pheme_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_5mthf_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_cl_c" stoichiometry="0.005532639"/> + <speciesReference constant="true" species="M_k_c" stoichiometry="0.207473951"/> + <speciesReference constant="true" species="M_argtrna_c" stoichiometry="0.289582963"/> + <speciesReference constant="true" species="M_2fe2s_c" stoichiometry="2.76632E-5"/> + <speciesReference constant="true" species="M_sheme_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_cu2_c" stoichiometry="0.000753361"/> + <speciesReference constant="true" species="M_malcoa_c" stoichiometry="3.49346E-5"/> + <speciesReference constant="true" species="M_pg161_p" stoichiometry="0.005942602"/> + <speciesReference constant="true" species="M_ca2_c" stoichiometry="0.005532639"/> + <speciesReference constant="true" species="M_murein4px4px4p_p" stoichiometry="0.000751505"/> + <speciesReference constant="true" species="M_mettrna_c" stoichiometry="0.150289892"/> + <speciesReference constant="true" species="M_histrna_c" stoichiometry="0.092687495"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_trnahis_c" stoichiometry="0.092687495"/> + <speciesReference constant="true" species="M_trnaile_c" stoichiometry="0.284346382"/> + <speciesReference constant="true" species="M_trnathr_c" stoichiometry="0.248213969"/> + <speciesReference constant="true" species="M_trnamet_c" stoichiometry="0.150289892"/> + <speciesReference constant="true" species="M_trnaser_c" stoichiometry="0.211034239"/> + <speciesReference constant="true" species="M_trnaasp_c" stoichiometry="0.236169831"/> + <speciesReference constant="true" species="M_trnatrp_c" stoichiometry="0.055507765"/> + <speciesReference constant="true" species="M_trnaasn_c" stoichiometry="0.236169831"/> + <speciesReference constant="true" species="M_trnatyr_c" stoichiometry="0.135103806"/> + <speciesReference constant="true" species="M_trnaleu_c" stoichiometry="0.440920172"/> + <speciesReference constant="true" species="M_trnalys_c" stoichiometry="0.33618854"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="50"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="0.6650845"/> + <speciesReference constant="true" species="M_trnaarg_c" stoichiometry="0.289582963"/> + <speciesReference constant="true" species="M_trnaala_c" stoichiometry="0.502711835"/> + <speciesReference constant="true" species="M_BIOMASS_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnapro_c" stoichiometry="0.216270821"/> + <speciesReference constant="true" species="M_trnacys_c" stoichiometry="0.089545546"/> + <speciesReference constant="true" species="M_trnagln_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_trnaphe_c" stoichiometry="0.181185724"/> + <speciesReference constant="true" species="M_trnagly_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_trnaval_c" stoichiometry="0.414213606"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="50"/> + <speciesReference constant="true" species="M_trnaglu_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="50"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTP3" metaid="a3a03ffb-6814-4b72-b7a4-725dbf6f2e0b" name="R_NTP3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006890</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a3a03ffb-6814-4b72-b7a4-725dbf6f2e0b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GARFT" metaid="_0c8663e6-6905-42bb-a508-820611839b50" name="phosphoribosylglycinamide_formyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006660</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 2.1.2.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0c8663e6-6905-42bb-a508-820611839b50"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006660"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gar_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fgam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE181" metaid="_4e8d1c7d-c92c-4e77-a531-effa1667dac1" name="R_FACOAE181" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4e8d1c7d-c92c-4e77-a531-effa1667dac1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_odecoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdcea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_4HTHRS" metaid="b2cafea3-8726-4784-a4a2-48fa2a8aac8c" name="R_4HTHRS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020360</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b2cafea3-8726-4784-a4a2-48fa2a8aac8c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phthr_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4hthr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS80" metaid="ada9e98b-8a39-4be5-b056-306a508a168b" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C8_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ada9e98b-8a39-4be5-b056-306a508a168b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hexACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ooctACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2Otex" metaid="_2be83b09-483b-4a46-9dd0-31a07515d995" name="H2O_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2be83b09-483b-4a46-9dd0-31a07515d995"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_ac_e" metaid="_7ec6edd5-b5d3-48a6-9815-9a46c1f4fcc0" name="R_EX_ac_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7ec6edd5-b5d3-48a6-9815-9a46c1f4fcc0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_ac_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPCTn" metaid="_108332eb-3f81-4162-b8e3-1bcd0dc6caa3" name="R_ASPCTn" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_020390 ) OR ( XFCFBP8418_020390 )</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 2.1.3.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_108332eb-3f81-4162-b8e3-1bcd0dc6caa3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.3.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020390"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020390"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cbp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cbasp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HISTD" metaid="b55307a6-0e24-4c04-a18a-50fb06f80c9e" name="histidinol_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020320</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b55307a6-0e24-4c04-a18a-50fb06f80c9e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020320"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_histd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_his_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NO3abcpp" metaid="_9522d0b7-f772-47d2-a160-5075d1284f88" name="Nitrate_ABC_transport" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007680</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 3.6.3.26</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9522d0b7-f772-47d2-a160-5075d1284f88"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.26"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_no3_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_no3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HDCEAtexi" metaid="_23f15e46-b806-4dd5-8ede-cad6055826b4" name="R_HDCEAtexi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_23f15e46-b806-4dd5-8ede-cad6055826b4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdcea_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hdcea_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PYNP2r" metaid="d6acaab4-06bd-4525-97c8-5c45785d9e5e" name="pyrimidine_nucleoside_phosphorylase__uracil_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.4.2.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d6acaab4-06bd-4525-97c8-5c45785d9e5e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uri_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ura_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_r1p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METOX2s" metaid="_3599ab7d-5ca1-4f48-a7d6-a92fe92064c9" name="methionine_oxidation_2__spontaneous_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3599ab7d-5ca1-4f48-a7d6-a92fe92064c9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_metsox_R_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IGPDH" metaid="faddba79-b4a3-4926-bce0-a53eb0bca6b4" name="imidazoleglycerol_phosphate_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020300</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#faddba79-b4a3-4926-bce0-a53eb0bca6b4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020300"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_eig3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_imacp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP8" metaid="c6e6c163-fb35-4065-9483-b861979d1fb8" name="R_NTPP8" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c6e6c163-fb35-4065-9483-b861979d1fb8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP7" metaid="_046bdf28-c0e5-4faf-83a5-02f473f3fdb9" name="R_NTPP7" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_046bdf28-c0e5-4faf-83a5-02f473f3fdb9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dttp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_s_e" metaid="d58ebf7a-8409-4264-993d-2093e0bf8638" name="R_EX_s_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d58ebf7a-8409-4264-993d-2093e0bf8638"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_s_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP9" metaid="_191b40e0-ca4d-44a4-9c02-9d8ce4932b14" name="Nucleoside_triphosphate_pyrophosphorylase__itp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002620</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_191b40e0-ca4d-44a4-9c02-9d8ce4932b14"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_itp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP4" metaid="_7ab016f3-69ae-4eed-8885-9d94da6b251a" name="Nucleoside_triphosphate_pyrophosphorylase__ctp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7ab016f3-69ae-4eed-8885-9d94da6b251a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LACZpp" metaid="e5b8a7d7-1c63-468e-a49a-389a1d5f2d2d" name="R_LACZpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007430</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.108</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e5b8a7d7-1c63-468e-a49a-389a1d5f2d2d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.108"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007430"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_lcts_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gal_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glc_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SUCDi" metaid="ae9654e3-8ff5-405c-8ebc-a113bfcad1e6" name="succinate_dehydrogenase__irreversible_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024610 AND XFCFBP8418_024620 AND XFCFBP8418_024640</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 1.3.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae9654e3-8ff5-405c-8ebc-a113bfcad1e6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024610"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024620"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024640"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP3" metaid="ba93ca71-afa0-469e-9d7f-1bd91cd4434a" name="Nucleoside_triphosphate_pyrophosphorylase__dctp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ba93ca71-afa0-469e-9d7f-1bd91cd4434a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP6" metaid="ed757e09-76c6-4cca-8623-918f4efc4b9b" name="R_NTPP6" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ed757e09-76c6-4cca-8623-918f4efc4b9b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP5" metaid="f14e6afc-e004-4b73-8d6d-6c8c0bb24d7e" name="Nucleoside_triphosphate_pyrophosphorylase__datp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f14e6afc-e004-4b73-8d6d-6c8c0bb24d7e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_datp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_damp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METDabcpp" metaid="_9bc8d89b-7d82-4017-b7e1-0759a6ae5774" name="R_METDabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010500 AND XFCFBP8418_010510 AND XFCFBP8418_010520</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9bc8d89b-7d82-4017-b7e1-0759a6ae5774"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010520"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG160abcpp" metaid="_86d0bbc7-9a05-4fd3-935a-bcf7aa6d3150" name="phosphatidylglycerol_transport_via_ABC_system__n_C16_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_86d0bbc7-9a05-4fd3-935a-bcf7aa6d3150"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg160_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ATPS4rpp" metaid="f0bf626d-9959-4d50-b908-57a66d78dd55" name="ATP_synthase__four_protons_for_one_ATP___periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023580 AND XFCFBP8418_023590 AND XFCFBP8418_023600 AND XFCFBP8418_023610 AND XFCFBP8418_023620 AND XFCFBP8418_023630 AND XFCFBP8418_023640 AND XFCFBP8418_023650</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 3.6.3.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f0bf626d-9959-4d50-b908-57a66d78dd55"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023600"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023620"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023610"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023590"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023580"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023640"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023650"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AMAOTr" metaid="e6386201-1524-44f5-bc9e-ff5b5450bfa2" name="adenosylmethionine_8_amino_7_oxononanoate_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015830</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.6.1.62</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e6386201-1524-44f5-bc9e-ff5b5450bfa2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.62"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015830"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_8aonn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amob_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dann_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OAAt2_2pp" metaid="_5b7ec468-c57e-4f07-8b94-82144d9e3605" name="R_OAAt2_2pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025480</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5b7ec468-c57e-4f07-8b94-82144d9e3605"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + <speciesReference constant="true" species="M_oaa_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NH3c" metaid="cf25787d-b625-4e50-854a-5f0419385415" name="R_NH3c" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cf25787d-b625-4e50-854a-5f0419385415"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nh3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ENOPH" metaid="ab9e5532-81ce-4b2e-8009-a6f5c6645073" name="R_ENOPH" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020250</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 3.1.3.77</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ab9e5532-81ce-4b2e-8009-a6f5c6645073"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.77"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dkmpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhmtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CPPPGO2" metaid="_328d0e4c-75eb-41bd-8f17-10156c122052" name="Oxygen_Independent_coproporphyrinogen_III_oxidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002610</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.99.22</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_328d0e4c-75eb-41bd-8f17-10156c122052"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.22"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002610"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cpppg3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_amet_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dad_5_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pppg9_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_xyl_D_e" metaid="_2d657b08-0cfe-4ab3-852f-cb44d3994a2d" name="R_EX_xyl_D_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2d657b08-0cfe-4ab3-852f-cb44d3994a2d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_xyl_D_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LSERDHr" metaid="_1b843714-69dc-4846-9dd8-d0bb20effff2" name="R_LSERDHr" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015390</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.276</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1b843714-69dc-4846-9dd8-d0bb20effff2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.276"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2amsa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METOX1s" metaid="fc65cd2a-80ce-466a-bb41-c6bf6e2b84b5" name="methionine_oxidation__spontaneous_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fc65cd2a-80ce-466a-bb41-c6bf6e2b84b5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_metsox_S_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FEENTERtpp" metaid="_6d421127-f3ae-416c-94fc-18eb4cc116eb" name="R_FEENTERtpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025340</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6d421127-f3ae-416c-94fc-18eb4cc116eb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_enter_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_enter_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACt2rpp" metaid="_8f779ea9-4a35-44b7-b02b-61e49784d0bd" name="R_ACt2rpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8f779ea9-4a35-44b7-b02b-61e49784d0bd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ac_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGMT" metaid="e06ab7fc-72b8-431b-a687-75473d1666e8" name="phosphoglucomutase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.4.2.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e06ab7fc-72b8-431b-a687-75473d1666e8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FORtex" metaid="_183f64a9-9808-41f7-b371-de4aeedc25d6" name="formate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_183f64a9-9808-41f7-b371-de4aeedc25d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_for_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_for_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HSERTA" metaid="_68945973-e5de-40c3-8e9d-e68a33ce7a1d" name="homoserine_O_trans_acetylase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005140</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 2.3.1.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_68945973-e5de-40c3-8e9d-e68a33ce7a1d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005140"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hom_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_achms_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDPDRE" metaid="_152490d3-7cf1-43d2-88e2-0766d8ff78d4" name="dTDP_4_dehydrorhamnose_3_5_epimerase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026230</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.1.3.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_152490d3-7cf1-43d2-88e2-0766d8ff78d4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026230"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dtdp4d6dg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dtdp4d6dm_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HPPtpp" metaid="_99c34c8b-d2d9-4d75-ba6c-3a468da8bb20" name="3_hydroxypropionate_transport_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_99c34c8b-d2d9-4d75-ba6c-3a468da8bb20"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hpp_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACODA" metaid="_985eba82-78f5-458d-ac11-ad79cdef0c9a" name="acetylornithine_deacetylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025270</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.5.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_985eba82-78f5-458d-ac11-ad79cdef0c9a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025270"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acorn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDEP2pp" metaid="e67186e2-99f1-4d32-b020-4cf5c4182f6c" name="murein_L_D_endopeptidase__murein5px3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e67186e2-99f1-4d32-b020-4cf5c4182f6c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5px3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5p3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPNCL2" metaid="ac9799a1-9612-46a2-9fcf-eb8e479756a9" name="phosphopantothenate_cysteine_ligase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015430</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac9799a1-9612-46a2-9fcf-eb8e479756a9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015430"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ppan_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ppcys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL160t2pp" metaid="_189bb35a-cccc-4787-93d1-376f4a96741d" name="fatty_acid_CoA_ligase__hexadecanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_189bb35a-cccc-4787-93d1-376f4a96741d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdca_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pmtcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G6PDH2r" metaid="_18f38ad3-0c49-4a07-b92b-0b0a39704b2a" name="glucose_6_phosphate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024680</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 1.1.1.49</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_18f38ad3-0c49-4a07-b92b-0b0a39704b2a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.49"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_6pgl_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR140x" metaid="_41865b96-d697-49fe-a260-28590901b124" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_41865b96-d697-49fe-a260-28590901b124"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tmrs2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_myrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDPDRR" metaid="e4371e03-e60d-4744-a7bf-f8b7297e70bc" name="dTDP_4_dehydrorhamnose_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026220</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.133</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e4371e03-e60d-4744-a7bf-f8b7297e70bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.133"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026220"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtdp4d6dm_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtdprmn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDPGDr" metaid="_581244d5-f3bb-46eb-9469-fd73d7ae2e78" name="UDPglucose_6_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018680</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.22</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_581244d5-f3bb-46eb-9469-fd73d7ae2e78"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.22"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_udpglcur_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLTGY1pp" metaid="_0296d9fc-1f09-40ab-8bf9-59a09c3ba31a" name="murein_lytic_transglycosylase__murein4p4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_003940 ) OR ( XFCFBP8418_019770 )</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0296d9fc-1f09-40ab-8bf9-59a09c3ba31a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019770"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4p4p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PItex" metaid="_3de5ad84-d9ef-4513-b1a1-89ae96a9e24d" name="phosphate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3de5ad84-d9ef-4513-b1a1-89ae96a9e24d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pi_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INSEPIH" metaid="a8f99b02-7604-48a7-acc9-11a945e0f445" name="3D__3_5_4__trihydroxycyclohexane_1_2_dione_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a8f99b02-7604-48a7-acc9-11a945e0f445"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dkdepiins_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dglca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UM3PL" metaid="_99e0cf8b-7c15-4b53-9740-9c2a31a7e1d6" name="UDP_N_acetylmuramate_L_alanyl_gamma_D_glutamyl_meso_diaminopimelate_ligase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026060</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 6.3.2.45</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_99e0cf8b-7c15-4b53-9740-9c2a31a7e1d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.45"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026060"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_LalaDgluMdap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uamr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ugmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHORTS" metaid="_0197284e-9752-40f7-a083-ab13da2f90e4" name="dihydroorotase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025380</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.5.2.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0197284e-9752-40f7-a083-ab13da2f90e4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.2.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhor_S_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cbasp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRASCS" metaid="_28e8db9c-a6c6-4596-8ddf-48b74c98cd53" name="phosphoribosylaminoimidazolesuccinocarboxamide_synthase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026780</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28e8db9c-a6c6-4596-8ddf-48b74c98cd53"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026780"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5aizc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_25aics_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLNtex" metaid="af01089c-0f17-484a-8e6b-ac20efef9a8f" name="L_glutamine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#af01089c-0f17-484a-8e6b-ac20efef9a8f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gln_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_mn2_e" metaid="_35d09179-85ad-4ed9-982a-a811ce8bfd7d" name="R_EX_mn2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_35d09179-85ad-4ed9-982a-a811ce8bfd7d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_mn2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP140abcpp" metaid="_64db8afd-c17f-4e58-8243-c385b91488b9" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C14_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_64db8afd-c17f-4e58-8243-c385b91488b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp140_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_arg_L_e" metaid="_4300546b-8d5e-44b0-a2a6-0312ee8de286" name="R_EX_arg_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4300546b-8d5e-44b0-a2a6-0312ee8de286"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_arg_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SCYSDS" metaid="a0191e6b-2355-48f8-956c-7a99c741781e" name="R_SCYSDS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002960 AND XFCFBP8418_025330</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.8.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a0191e6b-2355-48f8-956c-7a99c741781e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025330"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufse_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufsesh_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT160" metaid="_3b26aa1f-34ca-4dad-ad61-a2a6b9b9bdfe" name="1_hexadecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3b26aa1f-34ca-4dad-ad61-a2a6b9b9bdfe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_1hdecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_palmACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AMPTASEPG" metaid="_23f1c327-2a1b-4fcf-90cc-bfefbde6302d" name="R_AMPTASEPG" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015310</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.4.11.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_23f1c327-2a1b-4fcf-90cc-bfefbde6302d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.11.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015310"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_progly_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT161" metaid="c64617ac-311d-4b54-aef2-376374955091" name="1_hexadec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c64617ac-311d-4b54-aef2-376374955091"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_1hdec9eg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NNDPR" metaid="_83935dc5-8ee9-4dad-8a04-ec426c27cb6f" name="nicotinate_nucleotide_diphosphorylase__carboxylating_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000560</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.4.2.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83935dc5-8ee9-4dad-8a04-ec426c27cb6f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000560"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_quln_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nicrnt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2O2tex" metaid="_4a3c5df9-fcc2-41ee-85d3-57088b40d9d5" name="hydrogen_peroxide_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a3c5df9-fcc2-41ee-85d3-57088b40d9d5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SHK3Dr" metaid="_7406398b-f559-4d85-baa1-6920b86427ee" name="shikimate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006320</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7406398b-f559-4d85-baa1-6920b86427ee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006320"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3dhsk_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_skm_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACGK" metaid="_3aeb879a-defd-43b3-9081-935e4c82a433" name="acetylglutamate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025260</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.7.2.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3aeb879a-defd-43b3-9081-935e4c82a433"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.2.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acglu_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acg5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XYLK2" metaid="_9e88a5e9-cd1c-4f71-90df-822c1c0b7c14" name="R_XYLK2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9e88a5e9-cd1c-4f71-90df-822c1c0b7c14"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xylu_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xu5p_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MNt2pp" metaid="_15383220-6b0e-4974-b2b1-6ab3c9986d1b" name="manganese__Mn_2__transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025100</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_15383220-6b0e-4974-b2b1-6ab3c9986d1b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mn2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mn2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACGS" metaid="_134e5c0a-594b-48d7-ac9a-3c801410c386" name="N_acetylglutamate_synthase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025260</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 2.3.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_134e5c0a-594b-48d7-ac9a-3c801410c386"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acglu_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR141x" metaid="c193df77-3f15-4f73-bf4a-295ff19c3f63" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c193df77-3f15-4f73-bf4a-295ff19c3f63"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c7mrseACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUSAtpp" metaid="_2a1e61c7-0d81-43e9-92ba-81589d52587d" name="Fusidic_acid_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2a1e61c7-0d81-43e9-92ba-81589d52587d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_fusa_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fusa_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HEX1" metaid="b51b0918-0366-46af-9051-2f9d45d9dce0" name="hexokinase__D_glucose_ATP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024690</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 2.7.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b51b0918-0366-46af-9051-2f9d45d9dce0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glc_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA141abcpp" metaid="af4f3f74-fbd6-48a3-b446-daf7dc9619e9" name="phosphatidate_transport_via_ABC_system__n_C14_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#af4f3f74-fbd6-48a3-b446-daf7dc9619e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pa141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa141_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MG2tex" metaid="_010331b8-4e51-4805-adbd-540f39c725d8" name="magnesium__Mg_2__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_010331b8-4e51-4805-adbd-540f39c725d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mg2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mg2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UREAtpp" metaid="f4b7ccf6-301d-4907-9022-b862e6a29f46" name="Urea_transport_via_facilitate_diffusion__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020710</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f4b7ccf6-301d-4907-9022-b862e6a29f46"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_urea_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_urea_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS141pp" metaid="ab3b6156-8ad9-47af-bfcc-e942f8f7392c" name="cardiolipin_synthase__periplasmic__n_C14_1_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ab3b6156-8ad9-47af-bfcc-e942f8f7392c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg141_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_clpn141_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDCPDP" metaid="f70432ed-67fa-4f14-9fa2-7dd667e8358a" name="undecaprenyl_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017720</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.6.1.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f70432ed-67fa-4f14-9fa2-7dd667e8358a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udcpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYtex" metaid="_1663fe58-4112-48e2-8cef-d372f9bc3c20" name="glycine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1663fe58-4112-48e2-8cef-d372f9bc3c20"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gly_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CA2tex" metaid="_6f33b15b-8f42-472c-9e1e-5a417313088f" name="R_CA2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6f33b15b-8f42-472c-9e1e-5a417313088f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ca2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ca2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LACZ" metaid="b6a2eacf-02ef-4757-b073-21d3fe545be6" name="R_LACZ" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007430</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b6a2eacf-02ef-4757-b073-21d3fe545be6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007430"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lcts_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gal_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPR" metaid="bed293e1-9ce9-416c-b0e5-fa5e6511d118" name="N_acetyl_g_glutamyl_phosphate_reductase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025250</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.2.1.38</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bed293e1-9ce9-416c-b0e5-fa5e6511d118"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.38"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acg5sa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acg5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Bztex" metaid="_5b62e373-461f-4a8a-92f4-c11ee060f8aa" name="R_Bztex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5b62e373-461f-4a8a-92f4-c11ee060f8aa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_bz_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_bz_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XYLabcpp" metaid="_49d829e8-5877-4754-82ca-e6d254215d5b" name="R_XYLabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_019450</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49d829e8-5877-4754-82ca-e6d254215d5b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019450"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xyl_D_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xyl_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PFK_2" metaid="a62fee40-e915-4b75-9c4c-217c6b7d6451" name="R_PFK_2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026080</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a62fee40-e915-4b75-9c4c-217c6b7d6451"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tag6p_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tagdp_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_ala_L_e" metaid="bd85b437-c114-49ec-9f03-45aab86b866e" name="R_EX_ala_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bd85b437-c114-49ec-9f03-45aab86b866e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_A5PISO" metaid="_3dc617f3-cd4a-4062-9e2c-9ecde8ac30b4" name="arabinose_5_phosphate_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003470</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 5.3.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3dc617f3-cd4a-4062-9e2c-9ecde8ac30b4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003470"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ru5p_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ara5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PFK_3" metaid="cf04e16a-842a-43d4-9bcc-7c6ce92d5f34" name="R_PFK_3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026080</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 2.7.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cf04e16a-842a-43d4-9bcc-7c6ce92d5f34"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_s7p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_s17bp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DMPPS" metaid="_0c69784a-fed3-4cee-b9ff-0b780aa4c2e9" name="1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_reductase__dmpp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004660</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.17.7.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0c69784a-fed3-4cee-b9ff-0b780aa4c2e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.7.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004660"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2mb4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dmpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PTRCabcpp" metaid="e09fa73e-4241-4ee8-aace-6000c6002843" name="putrescine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e09fa73e-4241-4ee8-aace-6000c6002843"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ptrc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ptrc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LIPAabctex" metaid="d0901669-e727-4530-ae87-74cfa07d86b0" name="R_LIPAabctex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003500 AND XFCFBP8418_003510 AND XFCFBP8418_015320 AND XFCFBP8418_015330</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d0901669-e727-4530-ae87-74cfa07d86b0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015320"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipidA_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_kdo2lipidA_XF_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THFAT" metaid="a264d301-0933-454c-a596-0572f42082d6" name="Tetrahydrofolate_aminomethyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a264d301-0933-454c-a596-0572f42082d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_methf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5fthf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LIPOS" metaid="_2abbd216-a9dd-4510-8611-8ff11ef704b3" name="Lipoate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022360</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.8.1.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2abbd216-a9dd-4510-8611-8ff11ef704b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4fe4s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_octapb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2fe2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dad_5_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lipopb_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PHEMEabcpp" metaid="_54264b6d-1559-46bf-93b1-caa233327906" name="R_PHEMEabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_005050 AND XFCFBP8418_005060 AND XFCFBP8418_005070 AND XFCFBP8418_005090</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_54264b6d-1559-46bf-93b1-caa233327906"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005050"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005060"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005070"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pheme_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pheme_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGMH" metaid="_425d6e2c-d506-41be-b57a-4943a04a2ff4" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_beta__1_4_N_acetylglucosaminidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021350</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_425d6e2c-d506-41be-b57a-4943a04a2ff4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acgam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhm_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT180" metaid="_16fc294f-dc7e-4e90-9467-057ba96fdbad" name="1_octadecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_16fc294f-dc7e-4e90-9467-057ba96fdbad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_1odecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdcaACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT181" metaid="ee2e90a2-a5c0-43d3-b432-96199a842fcd" name="1_octadec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ee2e90a2-a5c0-43d3-b432-96199a842fcd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_octeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1odec11eg3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLNabc" metaid="_83627658-def1-4564-a3c7-31ec67a96de5" name="R_GLNabc" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83627658-def1-4564-a3c7-31ec67a96de5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD181" metaid="_9a7e24d6-b41f-423f-b110-002e27e6c5b9" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a7e24d6-b41f-423f-b110-002e27e6c5b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hcvac11eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c11vaceACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD180" metaid="_056f92d6-acaa-44c3-90a4-c6a31f073669" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_056f92d6-acaa-44c3-90a4-c6a31f073669"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hoctaACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_toctd2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE161abcpp" metaid="_77f7a92e-9927-4d64-b397-a4fcfa8138fe" name="phosphatidylethanolamine_transport_via_ABC_system__n_C16_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_77f7a92e-9927-4d64-b397-a4fcfa8138fe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe161_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GAMtex" metaid="ead08a95-0a7b-4d68-953d-b8dd8a7c3a6a" name="R_GAMtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ead08a95-0a7b-4d68-953d-b8dd8a7c3a6a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gam_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gam_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SERtex" metaid="a8ef9bf8-4075-4ca4-a656-34f3d41452c6" name="L_serine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a8ef9bf8-4075-4ca4-a656-34f3d41452c6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ser_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHFR" metaid="_1f19b72f-eeda-4abf-920a-07d6e7cffb38" name="dihydrofolate_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.5.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1f19b72f-eeda-4abf-920a-07d6e7cffb38"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021150"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHFS" metaid="_13a5fe0f-2844-417f-a8eb-1abf93b01f20" name="dihydrofolate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000740</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_13a5fe0f-2844-417f-a8eb-1abf93b01f20"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000740"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhpt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FEENTERtex" metaid="eacf7c47-e3ea-4bab-978d-9324629cf480" name="R_FEENTERtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012340</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eacf7c47-e3ea-4bab-978d-9324629cf480"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_enter_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_enter_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UPP3MT" metaid="fa32479a-0e66-4a55-a01e-631b6c2b6a7d" name="uroporphyrinogen_methyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010970</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fa32479a-0e66-4a55-a01e-631b6c2b6a7d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010970"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_uppg3_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dscl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XYLI1" metaid="cd735da3-d07f-42ea-9fa9-3f084052a9d4" name="R_XYLI1" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 5.3.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd735da3-d07f-42ea-9fa9-3f084052a9d4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_xyl_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xylu_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XYLK" metaid="_98a4c423-a9b2-42de-8f33-8674b923f3d6" name="xylulokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_98a4c423-a9b2-42de-8f33-8674b923f3d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xylu_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xu5p_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTHRDHpp" metaid="_84d8b4a0-718d-491a-84ac-f7e7523b2fad" name="glutathione_hydralase__periplasmic_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025410</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.4.19.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_84d8b4a0-718d-491a-84ac-f7e7523b2fad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.19.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025410"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthrd_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cgly_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHTNtex" metaid="_5a476698-d09d-4f4c-a26c-fd193b04d412" name="R_CHTNtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5a476698-d09d-4f4c-a26c-fd193b04d412"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_chtbs_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MSAR" metaid="_98df4efe-41f3-49e7-9a7f-8987cb7ec2e3" name="malonic_semialdehyde_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015390</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.1.1.298</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_98df4efe-41f3-49e7-9a7f-8987cb7ec2e3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.298"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_msa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AMPMS2" metaid="_3b4b5613-333a-4920-aa78-cf2eed4f8370" name="4_amino_2_methyl_5_phosphomethylpyrimidine_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_016510 ) OR ( XFCFBP8418_027850 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.99.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3b4b5613-333a-4920-aa78-cf2eed4f8370"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.99.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027850"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_air_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_4ampm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDCP3pp" metaid="_573aff9f-f091-49a1-9e66-52e4879215fc" name="murein_D_D_carboxypeptidase__murein5p5p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_018620 ) OR ( XFCFBP8418_020420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.16.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_573aff9f-f091-49a1-9e66-52e4879215fc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5p4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARD2" metaid="ce7fd466-1fc5-4da8-a40d-5d70368ec9fa" name="R_ARD2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020240</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 1.13.11.54</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ce7fd466-1fc5-4da8-a40d-5d70368ec9fa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.54"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhmtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4met2obut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_P5CD1p" metaid="_4ad84f32-ce3b-4630-8826-a3020d5140e2" name="1_pyrroline_5_carboxylate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.5.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4ad84f32-ce3b-4630-8826-a3020d5140e2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_1pyr5c_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FOMETR" metaid="_1651cb82-c525-41cb-8f93-9e8bb6281ea6" name="R_FOMETR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001390</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: 2.1.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1651cb82-c525-41cb-8f93-9e8bb6281ea6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5fthf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_methf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Kt2pp" metaid="_8718fecd-eee8-420f-a4be-3aeee5445ae4" name="potassium_transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000330 ) OR ( XFCFBP8418_016360 ) OR ( XFCFBP8418_027690 )</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8718fecd-eee8-420f-a4be-3aeee5445ae4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016360"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027690"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_k_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_k_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDPGDH" metaid="_8e841417-5fac-40c4-a287-87f2a0124da0" name="dTDPglucose_4_6_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026250</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.46</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8e841417-5fac-40c4-a287-87f2a0124da0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.46"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dtdpglu_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtdp4d6dg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYCLTt4ex" metaid="_5ce94b73-8d6a-4acf-815e-aec66fc9a7d0" name="R_GLYCLTt4ex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ce94b73-8d6a-4acf-815e-aec66fc9a7d0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyclt_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyclt_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DXPRIi" metaid="bffea5f3-c1e8-4d36-9200-91ba586e143d" name="1_deoxy_D_xylulose_reductoisomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024850</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.267</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bffea5f3-c1e8-4d36-9200-91ba586e143d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.267"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024850"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2me4p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASNTRS" metaid="_84fdebe3-555f-439e-87c7-5a4f3f5c0d31" name="R_ASNTRS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012160</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.22</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_84fdebe3-555f-439e-87c7-5a4f3f5c0d31"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.22"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012160"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asn_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaasn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_asntrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYTBO3_4pp" metaid="_01dd1124-5e22-4fa3-8cee-1216e6e867e1" name="cytochrome_oxidase_bo3__ubiquinol_8__4_protons___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003690 AND XFCFBP8418_003700 AND XFCFBP8418_003710 AND XFCFBP8418_003720</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 1.10.3.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01dd1124-5e22-4fa3-8cee-1216e6e867e1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.10.3.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003710"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003700"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_c" stoichiometry="0.5"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="4"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR120x" metaid="_635730d1-8a7f-4230-8bd9-0b5daef1f031" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_635730d1-8a7f-4230-8bd9-0b5daef1f031"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tddec2eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ddcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_EPS_XF_e" metaid="_5512fd43-90cc-4517-bc0a-5a90ba495950" name="R_DM_EPS_XF_e" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5512fd43-90cc-4517-bc0a-5a90ba495950"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_EPS_XF_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_dextrin_DEC_e_" metaid="d21c4e58-5421-466c-aa2b-2a2f493b5588" name="R_dextrin_DEC_e_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d21c4e58-5421-466c-aa2b-2a2f493b5588"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dextrin_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_14aglucan_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRD_L" metaid="_7951650e-b0b5-43cb-9716-1a425fd82b23" name="L_threonine_deaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017920</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 4.3.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7951650e-b0b5-43cb-9716-1a425fd82b23"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017920"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thr_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2obut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MAN1PT2r" metaid="f011fe9c-b111-4709-a072-ea9a04772109" name="R_MAN1PT2r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026210</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f011fe9c-b111-4709-a072-ea9a04772109"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_man1p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gdpmann_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE2t2pp" metaid="b471c729-206a-4924-bb5d-60b302adf7d5" name="iron__II__transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025100</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b471c729-206a-4924-bb5d-60b302adf7d5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fe2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DNTPPA" metaid="_4c7cc316-928b-4cca-b6ce-eee5a4d3a1a7" name="R_DNTPPA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023820</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.6.1.67</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4c7cc316-928b-4cca-b6ce-eee5a4d3a1a7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.67"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ahdt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhpmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_VALTRS" metaid="_59bfe82d-057b-4478-a969-8ad19fed6667" name="Valyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015270</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_59bfe82d-057b-4478-a969-8ad19fed6667"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015270"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_val_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaval_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_valtrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_man_e" metaid="c0b99037-9bd3-47d9-b2dd-d8746de1bfb6" name="R_EX_man_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c0b99037-9bd3-47d9-b2dd-d8746de1bfb6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_man_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DGLUISO" metaid="_5e26ce7d-687d-4b74-8e67-070b09d6f6a4" name="5_deoxy_D_glucuronic_acid_isomerase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5e26ce7d-687d-4b74-8e67-070b09d6f6a4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dglca_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dkglc_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACt4pp" metaid="_3fdc7bfe-8c80-414e-98a0-8c6be1009c89" name="Na__Acetate_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020610</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3fdc7bfe-8c80-414e-98a0-8c6be1009c89"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020610"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ac_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD161" metaid="_1629e996-4f3c-4656-9eac-7b497c254231" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1629e996-4f3c-4656-9eac-7b497c254231"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hcpalm9eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_t3c9palmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDEP1pp" metaid="c3ea7a13-1314-4e42-9915-b527a887f011" name="murein_D_D_endopeptidase__murein4px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c3ea7a13-1314-4e42-9915-b527a887f011"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4p4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD160" metaid="_1a5a8a65-35a7-4682-af84-23430d8143a7" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1a5a8a65-35a7-4682-af84-23430d8143a7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hpalmACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tpalm2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLtpp" metaid="_62636e29-a15d-4c1a-b82f-e7d10ec38aed" name="R_CLtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_62636e29-a15d-4c1a-b82f-e7d10ec38aed"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cl_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cl_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_so4_e" metaid="c973e658-83ca-4cdb-884a-5b3695cd90e7" name="R_EX_so4_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c973e658-83ca-4cdb-884a-5b3695cd90e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_so4_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROabcpp" metaid="d5fa365b-a304-44ee-ae06-93304242dd43" name="L_proline_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007680 AND XFCFBP8418_007690 ) OR ( XFCFBP8418_022120 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d5fa365b-a304-44ee-ae06-93304242dd43"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007690"/> + </fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022120"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR121x" metaid="_2b2701db-a16c-4397-bbb6-2fac326bbbaa" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C12_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2b2701db-a16c-4397-bbb6-2fac326bbbaa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c5ddeceACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cddec5eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACMUMptspp" metaid="f7b75691-42ce-44e0-ade6-9e876276580c" name="R_ACMUMptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f7b75691-42ce-44e0-ade6-9e876276580c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acmum_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acmum6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TTRCYCtpp" metaid="f42c71ab-0b19-4b93-9518-684a533bc0fd" name="Tetracycline_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f42c71ab-0b19-4b93-9518-684a533bc0fd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttrcyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ttrcyc_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GALt2" metaid="_70336839-2c1b-4ec1-95ff-43ed5dcb735c" name="R_GALt2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018650</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_70336839-2c1b-4ec1-95ff-43ed5dcb735c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_gal_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gal_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BTNt2tex" metaid="_17065047-6a16-4712-85c5-43d495f00b10" name="R_BTNt2tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_17065047-6a16-4712-85c5-43d495f00b10"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_btn_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_btn_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BTNt2ipp" metaid="_4c4a9986-87b2-4f2c-9a86-7cbb89e5c394" name="R_BTNt2ipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4c4a9986-87b2-4f2c-9a86-7cbb89e5c394"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_btn_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_btn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAPGR" metaid="_752a8888-0aab-47a8-97bc-e69e63a4222b" name="UDP_N_acetylenolpyruvoylglucosamine_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012220</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.3.1.98</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_752a8888-0aab-47a8-97bc-e69e63a4222b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.98"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012220"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uaccg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uamr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_St" metaid="_734bbc0a-8628-4df7-9cb5-6e444f23dcb6" name="R_St" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_734bbc0a-8628-4df7-9cb5-6e444f23dcb6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_s_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_s_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ICL" metaid="_37a917fc-b955-4189-aed5-76c371c3896e" name="Isocitrate_lyase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Anaplerotic_Reactions</p> + <p>EC_NUMBER: 4.1.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_37a917fc-b955-4189-aed5-76c371c3896e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_icit_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glx_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ATPHs" metaid="_9c2c5156-ceed-4286-a628-a988c5de0fbe" name="R_ATPHs" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.5.4.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9c2c5156-ceed-4286-a628-a988c5de0fbe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_itp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK4" metaid="_8e6b4881-d61c-4ae2-9d38-348c4a9acc87" name="nucleoside_diphosphate_kinase__ATP_dTDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8e6b4881-d61c-4ae2-9d38-348c4a9acc87"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dtdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dttp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACLS" metaid="f6e3c3c3-5844-456c-89fa-a9cdbd61623d" name="acetolactate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017900 AND XFCFBP8418_017910</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.2.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f6e3c3c3-5844-456c-89fa-a9cdbd61623d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_alac_S_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK5" metaid="_8dfdec93-4f40-4c39-9f3c-d96e30952e65" name="nucleoside_diphosphate_kinase__ATP_dGDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8dfdec93-4f40-4c39-9f3c-d96e30952e65"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dgdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dgtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SSALy" metaid="_8f4264f6-9e76-4632-9aec-d02cebd4e009" name="R_SSALy" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.2.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8f4264f6-9e76-4632-9aec-d02cebd4e009"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sucsal_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MG2t3_2pp" metaid="_24a2065d-926c-4daf-a5a3-c451a3bdd574" name="R_MG2t3_2pp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24a2065d-926c-4daf-a5a3-c451a3bdd574"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mg2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mg2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGMt2pp" metaid="_499cd0da-ac38-445f-be2c-0fd37860bb0d" name="GlcNAc_anhMurNAc_transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015550</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_499cd0da-ac38-445f-be2c-0fd37860bb0d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_anhgm_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK2" metaid="fb8b0ac5-9d06-4124-8cdf-31744363fa53" name="nucleoside_diphosphate_kinase__ATP_UDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fb8b0ac5-9d06-4124-8cdf-31744363fa53"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGt2rpp" metaid="ccccc1d4-b6f1-49bf-85f7-6f7c444a7c54" name="R_ARGt2rpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020210</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ccccc1d4-b6f1-49bf-85f7-6f7c444a7c54"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_arg_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK3" metaid="_6937dd0f-e67b-4fa0-9e97-a7fa4f63c3a6" name="nucleoside_diphosphate_kinase__ATP_CDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6937dd0f-e67b-4fa0-9e97-a7fa4f63c3a6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHORS" metaid="_6a897d1f-49f8-4da7-bd88-a7f00cd4ff26" name="chorismate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003900</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6a897d1f-49f8-4da7-bd88-a7f00cd4ff26"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3psme_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_chor_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THYMt3pp" metaid="_0f387fca-8fc8-4707-9393-ce4bf257835e" name="R_THYMt3pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0f387fca-8fc8-4707-9393-ce4bf257835e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thym_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_thym_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK1" metaid="_5ff4275e-3068-414e-9825-963bd0aaaace" name="nucleoside_diphosphate_kinase__ATP_GDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ff4275e-3068-414e-9825-963bd0aaaace"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHORM" metaid="c9ef9723-b4f3-45c4-b434-b1d82a17f661" name="chorismate_mutase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021090</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 5.4.99.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c9ef9723-b4f3-45c4-b434-b1d82a17f661"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.99.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021090"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chor_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pphn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SLNTtex" metaid="_59bfd58d-db80-4046-87fa-07e1fe20a2e9" name="R_SLNTtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_59bfd58d-db80-4046-87fa-07e1fe20a2e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_slnt_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_slnt_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_lys_L_e" metaid="_34b3bd5b-8073-429c-8023-21cc0a758eb2" name="R_EX_lys_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34b3bd5b-8073-429c-8023-21cc0a758eb2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_lys_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK8" metaid="df515a47-fefa-4505-b7b3-5dd650efff0a" name="nucleoside_diphosphate_kinase__ATP_dADP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#df515a47-fefa-4505-b7b3-5dd650efff0a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dadp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_datp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK6" metaid="_1cf12621-15ab-45dc-8978-5853bee37832" name="nucleoside_diphosphate_kinase__ATP_dUDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1cf12621-15ab-45dc-8978-5853bee37832"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dudp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dutp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK7" metaid="_6ae55dbd-0ec3-48a3-87e5-aeab9240820a" name="nucleoside_diphosphate_kinase__ATP_dCDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6ae55dbd-0ec3-48a3-87e5-aeab9240820a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dcdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD141" metaid="_90032cc8-9ce7-4a28-933b-85c43b405895" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_90032cc8-9ce7-4a28-933b-85c43b405895"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hcmrs7eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c7mrseACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ETFDH" metaid="fa3dc8e0-7469-4e03-9a23-76f958d313c6" name="Electron_transferring_flavoprotein_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022160 AND XFCFBP8418_026260 AND XFCFBP8418_026270</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 1.5.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fa3dc8e0-7469-4e03-9a23-76f958d313c6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026260"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026270"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_etfrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_etfox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD140" metaid="ff0ba4ff-1b01-455b-b108-acf6ac66253b" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ff0ba4ff-1b01-455b-b108-acf6ac66253b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hmrsACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tmrs2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDH2" metaid="e1d8bd90-d0d4-467b-8a79-3b5c9ac34ffd" name="Malate_dehydrogenase__ubiquinone_8_as_acceptor_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009850</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 1.1.5.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e1d8bd90-d0d4-467b-8a79-3b5c9ac34ffd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.5.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009850"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mal_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR181tipp" metaid="_23a8f60b-f236-41c5-930b-37dcce5a346b" name="R_12DGR181tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_23a8f60b-f236-41c5-930b-37dcce5a346b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr181_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr181_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD9" metaid="d8eb237f-c639-4696-b1d4-d9ed1d3f2ce7" name="5__nucleotidase__GMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d8eb237f-c639-4696-b1d4-d9ed1d3f2ce7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gsn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PMPK" metaid="_748158b4-58e6-4058-b881-81fe9214c5f9" name="phosphomethylpyrimidine_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006340</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.4.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_748158b4-58e6-4058-b881-81fe9214c5f9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4ampm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2mahmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD5" metaid="b12d5780-c02d-4806-a0aa-ae388924f32e" name="5__nucleotidase__dTMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b12d5780-c02d-4806-a0aa-ae388924f32e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_thymd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTHPe" metaid="_07676509-b6dc-4312-b61e-6d00cf2d7843" name="glutathione_peroxidase__e_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_016490 ) OR ( XFCFBP8418_027830 )</p> + <p>SUBSYSTEM: Superoxide_radicals_degradation</p> + <p>EC_NUMBER: 1.11.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_07676509-b6dc-4312-b61e-6d00cf2d7843"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.11.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027830"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016490"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_e" stoichiometry="2"/> + <speciesReference constant="true" species="M_h2o2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthox_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_e" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD6" metaid="b2e4836e-8385-49c1-bce5-d7b29f6708a9" name="5__nucleotidase__dAMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b2e4836e-8385-49c1-bce5-d7b29f6708a9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_damp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dad_2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD7" metaid="ef706ea1-e25a-4328-8f3e-3adff8714efc" name="5__nucleotidase__AMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ef706ea1-e25a-4328-8f3e-3adff8714efc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD8" metaid="_8a0f2edf-f196-43d9-bafe-75bb488fbe30" name="5__nucleotidase__dGMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8a0f2edf-f196-43d9-bafe-75bb488fbe30"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dgmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dgsn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD1" metaid="_2af412c4-0b5e-4ea6-a36d-04b8d824a7c2" name="5__nucleotidase__dUMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2af412c4-0b5e-4ea6-a36d-04b8d824a7c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dump_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_duri_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD2" metaid="_44c95b00-242e-492b-b9ec-734ffe6b1499" name="5__nucleotidase__UMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_44c95b00-242e-492b-b9ec-734ffe6b1499"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uri_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD3" metaid="_3fa0db80-f0dd-4110-b165-68ae0a69d35a" name="5__nucleotidase__dCMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3fa0db80-f0dd-4110-b165-68ae0a69d35a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dcyt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD4" metaid="ea65d95f-0616-4577-92a3-5925cbdc1c70" name="5__nucleotidase__CMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ea65d95f-0616-4577-92a3-5925cbdc1c70"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cytd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PHEMEtiex" metaid="bd3417a6-6b7f-4ceb-bcaa-c40abddd67ad" name="R_PHEMEtiex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bd3417a6-6b7f-4ceb-bcaa-c40abddd67ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pheme_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pheme_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DBTSr" metaid="b5bd87e7-9dc6-46dd-8b15-72d3bba6ccee" name="dethiobiotin_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005250</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.3.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b5bd87e7-9dc6-46dd-8b15-72d3bba6ccee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.3.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dann_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dtbt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE3Gabcpp" metaid="_0a9e571a-729f-4b63-a847-32f19c7e41dd" name="R_FE3Gabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012840</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0a9e571a-729f-4b63-a847-32f19c7e41dd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe3_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLCGSD_c" metaid="c37202c6-f0f8-4fd7-aeaf-7049b792bf93" name="R_GLCGSD_c" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c37202c6-f0f8-4fd7-aeaf-7049b792bf93"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="11"/> + <speciesReference constant="true" species="M_14aglucan_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_c" stoichiometry="12"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2SO" metaid="db507ffb-2fd9-443e-9dfc-62c2a6653f5f" name="R_H2SO" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#db507ffb-2fd9-443e-9dfc-62c2a6653f5f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_so4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TMDS" metaid="_00cd6cef-032d-4134-8100-858239e9af41" name="thymidylate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021160</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.1.1.45</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00cd6cef-032d-4134-8100-858239e9af41"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.45"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021160"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dtmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PDX5PS" metaid="_8bf4a65b-e5cb-4699-a6f4-fa2a050deccc" name="Pyridoxine_5__phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010890 AND XFCFBP8418_014620</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8bf4a65b-e5cb-4699-a6f4-fa2a050deccc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014620"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010890"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_phthr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pdx5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSERTr" metaid="_880ff223-84ce-40fd-b6b5-464a0a327b33" name="phosphoserine_transaminase_reversible" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021100</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.52</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_880ff223-84ce-40fd-b6b5-464a0a327b33"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.52"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3php_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pser_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SPMS" metaid="_89460829-87c3-46b3-8c6c-595f9fe28999" name="spermidine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015370</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.5.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_89460829-87c3-46b3-8c6c-595f9fe28999"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ametam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ptrc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5mta_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_spmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGN" metaid="_2a015dd2-0581-48c4-9594-0a49331c188c" name="arginase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.5.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2a015dd2-0581-48c4-9594-0a49331c188c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_urea_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CTPS2" metaid="_13da69ab-0d1c-4f42-bee4-2a1d39160097" name="CTP_synthase__glutamine_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022240</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_13da69ab-0d1c-4f42-bee4-2a1d39160097"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ATPPRTr" metaid="_0c686895-bb92-4259-b366-6864383857b5" name="ATP_phosphoribosyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020330</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 2.4.2.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0c686895-bb92-4259-b366-6864383857b5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020330"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prbatp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDCP5pp" metaid="ffdcc002-2deb-49f2-9bb9-e9e6a9bfcd36" name="murein_D_D_carboxypeptidase__murein5p3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_018620 ) OR ( XFCFBP8418_020420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.16.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ffdcc002-2deb-49f2-9bb9-e9e6a9bfcd36"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PDX5PO" metaid="_803d8994-51db-41c0-8563-f8707cce7608" name="pyridoxine_5__phosphate_oxidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.4.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_803d8994-51db-41c0-8563-f8707cce7608"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004150"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pdx5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pydx5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROD2" metaid="b5d69dbf-275a-4438-95e0-a0da3d4b00f3" name="Proline_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.5.99.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b5d69dbf-275a-4438-95e0-a0da3d4b00f3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.99.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1pyr5c_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_APCS" metaid="f189ca07-aa4c-49ba-a22a-686d1706b5f5" name="R_APCS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015370</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.5.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f189ca07-aa4c-49ba-a22a-686d1706b5f5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ametam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_15dap_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5mta_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_na15dap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MTHFD" metaid="db141efd-85a3-4f46-b622-01f77e5817da" name="methylenetetrahydrofolate_dehydrogenase__NADP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004790</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: 1.5.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#db141efd-85a3-4f46-b622-01f77e5817da"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_methf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MTHFC" metaid="_5fa06a26-166c-4fa3-93a0-1d5698a8b5b3" name="methenyltetrahydrofolate_cyclohydrolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004790</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: 3.5.4.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5fa06a26-166c-4fa3-93a0-1d5698a8b5b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_methf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OHPBAT" metaid="_0b00da5e-5263-4a0f-8d84-3be9ce2e27c3" name="O_Phospho_4_hydroxy_L_threonine_2_oxoglutarate_aminotransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021100</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.6.1.52</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b00da5e-5263-4a0f-8d84-3be9ce2e27c3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.52"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ohpb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_phthr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP141pp" metaid="ae795ce0-e733-4557-8d0f-fdd8bc63b4e8" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae795ce0-e733-4557-8d0f-fdd8bc63b4e8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp141_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg141_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AP5AH" metaid="_83169f0e-2340-4479-9035-d6c6f4bbc140" name="Ap5A_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019500</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.61</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83169f0e-2340-4479-9035-d6c6f4bbc140"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.61"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019500"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ap5a_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM4PH" metaid="_19997018-7609-4bb6-84a0-d013de71994b" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_beta__1_4_N_acetylglucosaminidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021350</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_19997018-7609-4bb6-84a0-d013de71994b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_anhgm4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhm4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TREptspp" metaid="_533ae11a-b048-4dc4-99d8-e11df0190fc8" name="R_TREptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND No_Assignment2 AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_533ae11a-b048-4dc4-99d8-e11df0190fc8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment2"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tre_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tre6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTHOr" metaid="_5200a072-a335-4b28-bb9d-b0006470ef4d" name="glutathione_oxidoreductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002170</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.8.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5200a072-a335-4b28-bb9d-b0006470ef4d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACGAMT" metaid="be79aead-a49a-4c67-903c-874f23419c47" name="R_ACGAMT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004820</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#be79aead-a49a-4c67-903c-874f23419c47"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uacgam_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_unaga_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR100x" metaid="f47bdb4a-719a-4aee-8dfa-7596f47b6ed8" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C10_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f47bdb4a-719a-4aee-8dfa-7596f47b6ed8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tdec2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ZN2tex" metaid="ab2f5868-2024-44b9-887b-ccf667eb087f" name="R_ZN2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ab2f5868-2024-44b9-887b-ccf667eb087f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_zn2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_zn2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NO3tex" metaid="e1734774-24bd-4670-b857-68c7d7be46ae" name="nitrate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e1734774-24bd-4670-b857-68c7d7be46ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_no3_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_no3_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ANHMK" metaid="_9ad62f87-a3a2-479a-8241-0e7f5a57ad1a" name="1_6_anhydrous_N_Acetylmuramate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015560</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 2.7.1.170</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ad62f87-a3a2-479a-8241-0e7f5a57ad1a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.170"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015560"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhm_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acmum6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MNabc_1" metaid="_04da6e87-f3dc-4788-93c3-c5599974807b" name="R_MNabc_1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 3.6.3.35</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_04da6e87-f3dc-4788-93c3-c5599974807b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.35"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mn2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mn2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DCTPD2" metaid="_24b63732-de2d-45f4-a436-4d69eb4e5058" name="dCTP_deaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011560</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.5.4.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24b63732-de2d-45f4-a436-4d69eb4e5058"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011560"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SPMDtex" metaid="_9e27748f-20df-4e06-8900-612653c342f6" name="spermidine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009840</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: 3.6.3.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9e27748f-20df-4e06-8900-612653c342f6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_spmd_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_spmd_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE3tex" metaid="_1957b4ed-7e5b-4ac0-bd1f-6b1c41ba35bc" name="iron__III__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1957b4ed-7e5b-4ac0-bd1f-6b1c41ba35bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fe3_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fe3_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACONTa" metaid="_67a44e2f-c272-4145-a365-5d7992ea2a59" name="aconitase__half_reaction_A__Citrate_hydro_lyase_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_022570 ) OR ( XFCFBP8418_025910 ) OR ( XFCFBP8418_025940 )</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 4.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_67a44e2f-c272-4145-a365-5d7992ea2a59"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022570"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025940"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cit_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acon_C_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACONTb" metaid="ddd85e75-afbd-47f2-9d5f-910734316be2" name="aconitase__half_reaction_B__Isocitrate_hydro_lyase_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_022570 ) OR ( XFCFBP8418_025910 ) OR ( XFCFBP8418_025940 )</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 4.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ddd85e75-afbd-47f2-9d5f-910734316be2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022570"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025940"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acon_C_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_icit_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUt2rpp" metaid="_09da3e46-6d4a-456a-b166-a0a0494d351b" name="R_GLUt2rpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000650</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_09da3e46-6d4a-456a-b166-a0a0494d351b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR160" metaid="c697ce5f-c134-46b1-b633-71634fdf17b9" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c697ce5f-c134-46b1-b633-71634fdf17b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3opalmACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hpalmACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_pro_L_e" metaid="_836b4621-e7d2-45ac-9d3a-a6be05a162a6" name="R_EX_pro_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_836b4621-e7d2-45ac-9d3a-a6be05a162a6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_pro_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR161" metaid="eba2b6d8-8b0f-4470-8be0-509695ddd781" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eba2b6d8-8b0f-4470-8be0-509695ddd781"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3ocpalm9eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hcpalm9eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_K2L4Aabctex" metaid="_8f58e924-4608-434e-9a13-13ca1c09b76f" name="R_K2L4Aabctex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003500 AND XFCFBP8418_003510 AND XFCFBP8418_015320 AND XFCFBP8418_015330</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8f58e924-4608-434e-9a13-13ca1c09b76f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015320"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipid4_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipid4_XF_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TRDR" metaid="_84967ad6-6731-4f9e-bf52-1e7d8087edc7" name="thioredoxin_reductase__NADPH_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003190 AND XFCFBP8418_013260</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 1.8.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_84967ad6-6731-4f9e-bf52-1e7d8087edc7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003190"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CU1Opp" metaid="_2df0f7fa-a7cb-4f3e-a134-2a79c561a3be" name="Cuprous_Oxidase__Cu_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015250</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 1.16.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2df0f7fa-a7cb-4f3e-a134-2a79c561a3be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.16.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cu_p" stoichiometry="4"/> + <speciesReference constant="true" species="M_o2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cu2_p" stoichiometry="4"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT161" metaid="_8743f99e-7c52-4a20-b3f9-ebd7f69a6f96" name="R_G3PAT161" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8743f99e-7c52-4a20-b3f9-ebd7f69a6f96"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1hdec9eg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPKr" metaid="_296dbd06-b104-4ade-8554-7fb5947ef74f" name="polyphosphate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012370</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 2.7.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_296dbd06-b104-4ade-8554-7fb5947ef74f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CDPMEK" metaid="_3d262e90-fef9-4e40-9171-7fa2af701e00" name="4__cytidine_5__diphospho__2_C_methyl_D_erythritol_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.148</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d262e90-fef9-4e40-9171-7fa2af701e00"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.148"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4c2me_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2p4c2me_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT160" metaid="_0d791462-eb70-44f7-9e4d-3b6f0b5916bc" name="R_G3PAT160" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0d791462-eb70-44f7-9e4d-3b6f0b5916bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_palmACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1hdecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR40x" metaid="bd1217d3-2f78-4182-a09d-af56c64865f2" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C4_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bd1217d3-2f78-4182-a09d-af56c64865f2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_but2eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_butACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALR2" metaid="_1e88fcb4-f43e-4d83-a5ff-c5975edf1664" name="aldose_reductase__methylglyoxal_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_008650</p> + <p>SUBSYSTEM: Methylglyoxal_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1e88fcb4-f43e-4d83-a5ff-c5975edf1664"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mthgxl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acetol_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ThDPAT" metaid="_80a4c7df-ab7a-4bca-9b2f-19945f08db4e" name="R_ThDPAT" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_80a4c7df-ab7a-4bca-9b2f-19945f08db4e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thmpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_athtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IGPS" metaid="_1bc1f9b0-e8fa-4073-8597-eb6a18fa2e58" name="indole_3_glycerol_phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026720</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.1.1.48</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1bc1f9b0-e8fa-4073-8597-eb6a18fa2e58"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.48"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2cpr5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ig3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HPPtex" metaid="_29dee993-41e5-4ed3-aa67-0e67e024cdc7" name="3_hydroxypropionate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_29dee993-41e5-4ed3-aa67-0e67e024cdc7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hpp_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3hpp_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INDOLEt2pp" metaid="f09cdaf4-7b4c-4c97-b788-b1022184b24c" name="R_INDOLEt2pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f09cdaf4-7b4c-4c97-b788-b1022184b24c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_indole_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_indole_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALAALAabcpp" metaid="_1463c0d7-56a1-436e-9e50-55a7b363bff0" name="D_alanyl_D_alanine__DalaDala__transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1463c0d7-56a1-436e-9e50-55a7b363bff0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_alaala_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_alaala_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S4FE4SR" metaid="a39e83c4-8130-4285-a95c-5019026fba5d" name="R_S4FE4SR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a39e83c4-8130-4285-a95c-5019026fba5d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_sufbcd_4fe4s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SLCYSS" metaid="f39f7141-fb0d-4e12-9e6b-855ed0a8b96a" name="R_SLCYSS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006490 ) OR ( XFCFBP8418_010980 )</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 2.5.1.47</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f39f7141-fb0d-4e12-9e6b-855ed0a8b96a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.47"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010980"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006490"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tsul_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acser_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_scys_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2Stex" metaid="_9a4a4643-63be-43f7-8b3a-6c7f06817bc9" name="Hydrogen_sulfide_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a4a4643-63be-43f7-8b3a-6c7f06817bc9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2s_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2s_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S4FE4ST" metaid="_2a1716f0-15c5-4cc4-99a2-b839a2e051ed" name="R_S4FE4ST" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950 AND XFCFBP8418_012150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2a1716f0-15c5-4cc4-99a2-b839a2e051ed"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012150"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_sufbcd_4fe4s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4fe4s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TREtex" metaid="bbe09276-0f1b-463f-a7f8-af3a0e0888f4" name="trehalose_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bbe09276-0f1b-463f-a7f8-af3a0e0888f4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tre_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tre_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_ca2_e" metaid="_5cb9433a-1034-41dc-9665-2169a037d64e" name="R_EX_ca2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5cb9433a-1034-41dc-9665-2169a037d64e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_ca2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EDTXS3XF" metaid="_0d0e9caf-e261-478c-aa35-a28ea1bbabe7" name="R_EDTXS3XF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004060 ) OR ( XFCFBP8418_015020 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.-</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0d0e9caf-e261-478c-aa35-a28ea1bbabe7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.-"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004060"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015020"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hddecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipid4HL_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_kdo2lipidA_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA161abcpp" metaid="c05fbc20-f6ee-4d43-a4da-d019b0a17c45" name="phosphatidate_transport_via_ABC_system__n_C16_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c05fbc20-f6ee-4d43-a4da-d019b0a17c45"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa161_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR140" metaid="_3f7cf43a-bec4-4e63-bcc4-6321a02571c1" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3f7cf43a-bec4-4e63-bcc4-6321a02571c1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3omrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hmrsACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR180tipp" metaid="bdba66cf-d220-480a-884e-50c672f09150" name="R_12DGR180tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bdba66cf-d220-480a-884e-50c672f09150"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr180_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr180_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GMPS2" metaid="_8fe6e735-7903-4534-8398-e8ee0a6624c6" name="GMP_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004770</p> + <p>SUBSYSTEM: Purine_biosynthesis</p> + <p>EC_NUMBER: 6.3.5.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8fe6e735-7903-4534-8398-e8ee0a6624c6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.5.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004770"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_gmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR141" metaid="_49728e10-3c78-43f6-a132-ea7cc9eb9fbb" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49728e10-3c78-43f6-a132-ea7cc9eb9fbb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3ocmrs7eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hcmrs7eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL180t2pp" metaid="eb1f72a2-ac74-4a5c-b7bc-9b29c71d87f6" name="fatty_acid_CoA_ligase__octadecanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eb1f72a2-ac74-4a5c-b7bc-9b29c71d87f6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdca_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_stcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PYAM5POr" metaid="_6a4ff0cf-2525-49ac-8234-77e07699f8b0" name="pyridoxamine_5__phosphate_oxidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.4.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6a4ff0cf-2525-49ac-8234-77e07699f8b0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004150"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyam5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pydx5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUabcpp" metaid="_8e7235ba-0cae-487d-9a6c-5324972d6fdf" name="L_glutamate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007600</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8e7235ba-0cae-487d-9a6c-5324972d6fdf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007600"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT140" metaid="_28833569-f07f-40e5-b678-fa48db25b28a" name="R_G3PAT140" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28833569-f07f-40e5-b678-fa48db25b28a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_myrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1tdecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SO3tex" metaid="_18616028-27c7-4c6b-af75-6cc5f4b1bf92" name="R_SO3tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_18616028-27c7-4c6b-af75-6cc5f4b1bf92"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_so3_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_so3_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT141" metaid="_0ecee537-dc8c-47f3-83c2-37fde71aca86" name="R_G3PAT141" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ecee537-dc8c-47f3-83c2-37fde71aca86"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1tdec7eg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_zn2_e" metaid="_4159c7ec-d404-4f29-8f77-4aeb035a94d3" name="R_EX_zn2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4159c7ec-d404-4f29-8f77-4aeb035a94d3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_zn2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ICITt_kt" metaid="f31ef274-0ba9-42bf-8ec3-36b15d0f53ae" name="R_ICITt_kt" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025570</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f31ef274-0ba9-42bf-8ec3-36b15d0f53ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_icit_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_icit_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS161pp" metaid="_330389ae-5902-43a7-bbb8-8539ca5d20f6" name="cardiolipin_synthase__periplasmic__n_C16_1_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_330389ae-5902-43a7-bbb8-8539ca5d20f6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg161_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_clpn161_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2Otpp" metaid="_428d2359-fbda-446b-968a-347363e63c46" name="H2O_transport_via_diffusion__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_428d2359-fbda-446b-968a-347363e63c46"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYOX3" metaid="f55a5957-c961-408b-8b81-cefe28454487" name="R_GLYOX3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023680</p> + <p>SUBSYSTEM: Methylglyoxal_Metabolism</p> + <p>EC_NUMBER: 4.2.1.130</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f55a5957-c961-408b-8b81-cefe28454487"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.130"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mthgxl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_lac_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_mg2_e" metaid="_7aad2af7-c5ef-42cf-b7dc-a845bf767d19" name="R_EX_mg2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7aad2af7-c5ef-42cf-b7dc-a845bf767d19"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_mg2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHGLYH" metaid="_9db97772-9661-4bce-9fe2-80cb8f3ee38f" name="R_DHGLYH" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9db97772-9661-4bce-9fe2-80cb8f3ee38f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhgly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glx_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DB4PS" metaid="_421cf543-364a-4062-846b-f8f45f1a69a1" name="3_4_Dihydroxy_2_butanone_4_phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009770</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.99.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_421cf543-364a-4062-846b-f8f45f1a69a1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.99.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009770"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ru5p_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_db4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDCP2App" metaid="_80658f59-ff34-4f09-b691-7484e8d693a4" name="murein_L_D_carboxypeptidase__murein5p5p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_80658f59-ff34-4f09-b691-7484e8d693a4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_alaala_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACACT1r" metaid="_87eb8bca-e417-4d10-8773-fb67586b7b3c" name="acetyl_CoA_C_acetyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_87eb8bca-e417-4d10-8773-fb67586b7b3c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_aacoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP181pp" metaid="_27e14e08-7e2a-4bd7-b2c1-f25770fdc7b2" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_27e14e08-7e2a-4bd7-b2c1-f25770fdc7b2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp181_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg181_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FRUpts2" metaid="_49070d4c-f0be-4db8-8494-ed3d451df624" name="R_FRUpts2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49070d4c-f0be-4db8-8494-ed3d451df624"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fru_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACHBS" metaid="_789c92ae-6b7b-4d83-ad40-4db45c2628ad" name="2_aceto_2_hydroxybutanoate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017900 AND XFCFBP8418_017910</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.2.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_789c92ae-6b7b-4d83-ad40-4db45c2628ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2obut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ahbut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHTNABCt" metaid="_66ab3ddb-b37e-4479-a284-4e4856416781" name="R_CHTNABCt" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_66ab3ddb-b37e-4479-a284-4e4856416781"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_chtbs_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA120abcpp" metaid="e5726ea6-018f-4fa7-a709-2a4af8810ec5" name="phosphatidate_transport_via_ABC_system__n_C12_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e5726ea6-018f-4fa7-a709-2a4af8810ec5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa120_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HISDr" metaid="_2d6e0f6b-14f9-4471-895d-0846b763cb9f" name="histidase_r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 4.3.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2d6e0f6b-14f9-4471-895d-0846b763cb9f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_his_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_urcan_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM3Pt2pp" metaid="_18440f86-dad4-41f8-8cfb-e015c27965aa" name="GlcNAc_anhMurNAc_tripeptide_transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015550</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_18440f86-dad4-41f8-8cfb-e015c27965aa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm3p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ANPRT" metaid="e154ca2e-3890-47e1-aea1-87fc24c96233" name="anthranilate_phosphoribosyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026730</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.4.2.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e154ca2e-3890-47e1-aea1-87fc24c96233"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026730"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anth_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pran_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AHSERL3" metaid="_28ebcd3c-2de8-4221-9952-56d90ca3e156" name="R_cysteine_synthase__Selenide_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006490 ) OR ( XFCFBP8418_010590 ) OR ( XFCFBP8418_010980 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28ebcd3c-2de8-4221-9952-56d90ca3e156"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010590"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010980"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006490"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acser_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_seln_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_selcys_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AHSERL2" metaid="_1e0210a1-ddb2-4251-99e6-242396b57ff1" name="R_AHSERL2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010590</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 2.5.1.49</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1e0210a1-ddb2-4251-99e6-242396b57ff1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.49"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_achms_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2s_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hcys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G2PP" metaid="_889da4e8-8566-4f3f-acb8-97291ae9294b" name="glycerol_2_phosphate_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005240</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.1.3.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_889da4e8-8566-4f3f-acb8-97291ae9294b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/ 3.1.3.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc2p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PHEMEAS" metaid="_4dff57e7-ed27-4653-9ce4-88dfebdec7d8" name="putative_hemeA_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003990</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4dff57e7-ed27-4653-9ce4-88dfebdec7d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003990"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hemeO_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hemeA_1_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_fe2_e" metaid="ff3238a4-c949-47c0-91fd-b6300ab90ff7" name="R_EX_fe2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ff3238a4-c949-47c0-91fd-b6300ab90ff7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_fe2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR120" metaid="_73a75cd3-61a7-4f57-9e50-0270d6928984" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_73a75cd3-61a7-4f57-9e50-0270d6928984"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3oddecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hddecACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FTHFD" metaid="_97dbb6ec-f60d-41d3-9872-a30786df7ee9" name="formyltetrahydrofolate_deformylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017820</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: 3.5.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97dbb6ec-f60d-41d3-9872-a30786df7ee9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR121" metaid="_94014400-7692-4e52-a4cd-e4a5ede8c869" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C12_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94014400-7692-4e52-a4cd-e4a5ede8c869"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3ocddec5eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hcddec5eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SUCCt3pp" metaid="_11a2ab15-ec29-4b32-a8f2-63b22bb92ef7" name="R_SUCCt3pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_11a2ab15-ec29-4b32-a8f2-63b22bb92ef7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_succ_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA141" metaid="_8f1551cd-700d-4fa8-a5ac-06562bd1596f" name="Phosphatidylglycerol_synthase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8f1551cd-700d-4fa8-a5ac-06562bd1596f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdtdec7eg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HIStex" metaid="d880ccde-0889-4968-9fb8-f43fb3d638f2" name="L_histidine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d880ccde-0889-4968-9fb8-f43fb3d638f2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_his_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_his_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA140" metaid="_0c38e552-5295-476b-b889-e73a205647b9" name="Phosphatidylglycerol_synthase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0c38e552-5295-476b-b889-e73a205647b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdtdecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LPSS1XF" metaid="faf631a7-983a-4d80-8094-afc7f95450db" name="R_LPSS1XF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#faf631a7-983a-4d80-8094-afc7f95450db"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gdpmann_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_udpxyl_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_kdo2lipidA_XF_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_udpgalur_c" stoichiometry="53"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="15"/> + <speciesReference constant="true" species="M_dtdprmn_c" stoichiometry="19"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtdp_c" stoichiometry="19"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="70"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INSDH" metaid="f55db845-14e8-4232-a52f-d39c0aa4daa4" name="2_keto_myo_inositol_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.2.1.44</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f55db845-14e8-4232-a52f-d39c0aa4daa4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.44"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ins_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dkdepiins_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL181t2pp" metaid="_4e19d812-c78a-431b-a118-69204652bfc4" name="fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4e19d812-c78a-431b-a118-69204652bfc4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdcea_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_odecoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPTHpp" metaid="cc7759f9-512e-4135-9b99-a3c70d664f0c" name="R_PPTHpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006010</p> + <p>SUBSYSTEM: Nucleotides_degradation</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cc7759f9-512e-4135-9b99-a3c70d664f0c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006010"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppt_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RBFSb" metaid="e3ead820-9549-47da-8f2e-b7b2d114056b" name="riboflavin_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009760</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e3ead820-9549-47da-8f2e-b7b2d114056b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009760"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dmlz_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ribflv_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4r5au_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_ni2_e" metaid="e41c8663-235b-4f95-b953-a39c06455791" name="R_EX_ni2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e41c8663-235b-4f95-b953-a39c06455791"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_ni2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MECDPS" metaid="_7bbec3fd-1e0b-4758-95bf-4186e227c611" name="2_C_methyl_D_erythritol_2_4_cyclodiphosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022190</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.6.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7bbec3fd-1e0b-4758-95bf-4186e227c611"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.6.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022190"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2p4c2me_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2mecdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OXOGAH" metaid="_148cbb5c-87ce-48fd-80c2-b6eb893a5bc2" name="R_OXOGAH" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005030</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 3.5.1.111</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_148cbb5c-87ce-48fd-80c2-b6eb893a5bc2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.111"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ogm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_6PDDGLUCA" metaid="aabd4ea8-d600-4f18-98d7-23aadf0eab7f" name="6_phospho_5_dehydro_2_deoxy_D_gluconate_aldolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.1.2.29</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#aabd4ea8-d600-4f18-98d7-23aadf0eab7f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.29"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_6pddgluc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_msa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS181pp" metaid="_5aebb49f-ce41-48b5-abac-a2d8f4ec0c5d" name="cardiolipin_synthase__periplasmic__n_C18_1_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5aebb49f-ce41-48b5-abac-a2d8f4ec0c5d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg181_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_clpn181_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HMBS" metaid="_464f1d0a-4d4a-4d95-95d5-4d7134b70ca8" name="hydroxymethylbilane_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018480</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.61</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_464f1d0a-4d4a-4d95-95d5-4d7134b70ca8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.61"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppbng_c" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hmbil_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="4"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RBFSa" metaid="aefd8b19-116a-4449-8353-ad4f3ae9953a" name="riboflavin_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009780</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#aefd8b19-116a-4449-8353-ad4f3ae9953a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009780"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_db4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4r5au_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dmlz_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CU2tpp" metaid="_6e01cc85-1914-4f02-916d-8d6a5976fbb8" name="copper_transport_in_via_permease__no_H__" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6e01cc85-1914-4f02-916d-8d6a5976fbb8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cu2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cu2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LIPAabcpp" metaid="_9ca89924-0cf9-4d37-98d9-9597dc5d2f52" name="R_LIPAabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ca89924-0cf9-4d37-98d9-9597dc5d2f52"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_kdo2lipidA_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipidA_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PAPSR2" metaid="_94d14f04-db64-4886-9e29-e7c1d808685f" name="R_PAPSR2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_002720 AND XFCFBP8418_012410 ) OR ( XFCFBP8418_002720 AND XFCFBP8418_013020 ) OR ( XFCFBP8418_002720 AND XFCFBP8418_021660 ) OR ( or )</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 1.8.4.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94d14f04-db64-4886-9e29-e7c1d808685f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012410"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021660"/> + </fbc:and> + <fbc:geneProductRef fbc:geneProduct="or"/> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013020"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_paps_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HXPRT" metaid="e06109e7-8772-41b8-97c4-aad71904ef31" name="hypoxanthine_phosphoribosyltransferase__Hypoxanthine_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021340</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.4.2.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e06109e7-8772-41b8-97c4-aad71904ef31"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hxan_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MTAP" metaid="_3a4a1688-0e11-4ed9-96ac-fb9352ef8b1a" name="R_MTAP" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021330</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 2.4.2.28</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3a4a1688-0e11-4ed9-96ac-fb9352ef8b1a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.28"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021330"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5mta_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ade_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5mdr1p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP161pp" metaid="ebb9f9f4-9f9d-4cbf-9dd9-d70d2bad7788" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ebb9f9f4-9f9d-4cbf-9dd9-d70d2bad7788"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp161_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg161_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OMPHHX" metaid="d1515964-e28b-41f8-9aaf-420a0992a400" name="2_octaprenyl_6_methoxyphenol_hydroxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010930</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d1515964-e28b-41f8-9aaf-420a0992a400"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2omph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="0.5"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ombzl_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EDD" metaid="_669cb284-2f5e-4613-bf55-8d2e43585a6b" name="6_phosphogluconate_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024710</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 4.2.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_669cb284-2f5e-4613-bf55-8d2e43585a6b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_6pgc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ddg6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FRUptspp" metaid="_3b1cf144-0566-4f11-a09e-1c5e373c4a7a" name="D_fructose_transport_via_PEP_Pyr_PTS__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3b1cf144-0566-4f11-a09e-1c5e373c4a7a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fru_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_f1p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EDA" metaid="c0c41082-29b9-4aac-8e49-b75631a23d96" name="2_dehydro_3_deoxy_phosphogluconate_aldolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024720</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 4.1.2.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c0c41082-29b9-4aac-8e49-b75631a23d96"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ddg6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM4Pt2pp" metaid="cd579a5d-365c-4fdc-8ab1-8c1302bed8f1" name="GlcNAc_anhMurNAc_tetrapeptide_transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015550</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd579a5d-365c-4fdc-8ab1-8c1302bed8f1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROT_LesA_BioS" metaid="cbdde19f-0825-4050-8f2c-5a4159aa0680" name="R_PROT_LesA_BioS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011400</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cbdde19f-0825-4050-8f2c-5a4159aa0680"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011400"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asptrna_c" stoichiometry="23"/> + <speciesReference constant="true" species="M_glutrna_c" stoichiometry="17"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1997.72"/> + <speciesReference constant="true" species="M_asntrna_c" stoichiometry="37"/> + <speciesReference constant="true" species="M_phetrna_c" stoichiometry="22"/> + <speciesReference constant="true" species="M_glytrna_c" stoichiometry="59"/> + <speciesReference constant="true" species="M_glntrna_c" stoichiometry="34"/> + <speciesReference constant="true" species="M_cystrna_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_trptrna_c" stoichiometry="11"/> + <speciesReference constant="true" species="M_protrna_c" stoichiometry="28"/> + <speciesReference constant="true" species="M_valtrna_c" stoichiometry="25"/> + <speciesReference constant="true" species="M_sertrna_c" stoichiometry="47"/> + <speciesReference constant="true" species="M_argtrna_c" stoichiometry="21"/> + <speciesReference constant="true" species="M_thrtrna_c" stoichiometry="63"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1997.72"/> + <speciesReference constant="true" species="M_alatrna_c" stoichiometry="60"/> + <speciesReference constant="true" species="M_iletrna_c" stoichiometry="29"/> + <speciesReference constant="true" species="M_lystrna_c" stoichiometry="15"/> + <speciesReference constant="true" species="M_leutrna_c" stoichiometry="58"/> + <speciesReference constant="true" species="M_mettrna_c" stoichiometry="7"/> + <speciesReference constant="true" species="M_tyrtrna_c" stoichiometry="28"/> + <speciesReference constant="true" species="M_histrna_c" stoichiometry="14"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_trnahis_c" stoichiometry="14"/> + <speciesReference constant="true" species="M_LesA_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaile_c" stoichiometry="29"/> + <speciesReference constant="true" species="M_trnaarg_c" stoichiometry="21"/> + <speciesReference constant="true" species="M_trnathr_c" stoichiometry="63"/> + <speciesReference constant="true" species="M_trnaala_c" stoichiometry="60"/> + <speciesReference constant="true" species="M_trnapro_c" stoichiometry="28"/> + <speciesReference constant="true" species="M_trnamet_c" stoichiometry="7"/> + <speciesReference constant="true" species="M_trnaser_c" stoichiometry="47"/> + <speciesReference constant="true" species="M_trnacys_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_trnaasp_c" stoichiometry="23"/> + <speciesReference constant="true" species="M_trnatrp_c" stoichiometry="11"/> + <speciesReference constant="true" species="M_trnaasn_c" stoichiometry="37"/> + <speciesReference constant="true" species="M_trnagln_c" stoichiometry="34"/> + <speciesReference constant="true" species="M_trnaphe_c" stoichiometry="22"/> + <speciesReference constant="true" species="M_trnatyr_c" stoichiometry="28"/> + <speciesReference constant="true" species="M_trnagly_c" stoichiometry="59"/> + <speciesReference constant="true" species="M_trnaval_c" stoichiometry="25"/> + <speciesReference constant="true" species="M_trnaglu_c" stoichiometry="17"/> + <speciesReference constant="true" species="M_trnaleu_c" stoichiometry="58"/> + <speciesReference constant="true" species="M_trnalys_c" stoichiometry="15"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1997.72"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1997.72"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AMPTASECG" metaid="_9c0dc877-c529-45e2-ab06-fabb4fc1ce55" name="alanyl_aminopeptidase__cys_gly_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002800</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 3.4.11.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9c0dc877-c529-45e2-ab06-fabb4fc1ce55"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.11.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cgly_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NH4tpp" metaid="f64fe1cf-9c3a-49ec-b329-1981fc7ebfe7" name="ammonia_reversible_transport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017690</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f64fe1cf-9c3a-49ec-b329-1981fc7ebfe7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nh4_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SHCHD2" metaid="_19647eb7-b93d-447a-88e3-c64aa879bebd" name="R_SHCHD2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010970</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.1.76</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_19647eb7-b93d-447a-88e3-c64aa879bebd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.76"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010970"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dscl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_scl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CU2_bd_CopA" metaid="_14797287-fd1a-4dfc-b300-9daffa59e830" name="Copper_sequestration_by_cop_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015250</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_14797287-fd1a-4dfc-b300-9daffa59e830"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cu2_p" stoichiometry="11"/> + <speciesReference constant="true" species="M_CopA_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_11cu2s_CopA_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THBPTD" metaid="_8622fea6-35d5-4e81-9aef-5a66f3939348" name="R_THBPTD" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012500</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.96</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8622fea6-35d5-4e81-9aef-5a66f3939348"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.96"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012500"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thbpt4acam_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhbpt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYt2pp" metaid="_7f478a86-dcba-4b43-bdfa-bf36dbd733b1" name="R_GLYt2pp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7f478a86-dcba-4b43-bdfa-bf36dbd733b1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gly_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LPSabctpp" metaid="_458e980d-70fa-448b-ac26-8d00fb518e9a" name="Oantigen_core_kdo_lipidA_Ralstonia_solanacearum_specific_LPS_transport_via_ABC_system_periplasm_to_extracellular_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_458e980d-70fa-448b-ac26-8d00fb518e9a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_OLPS_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_OLPS_XF_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EDTXS1XF" metaid="cfeb2f99-37cd-4276-ac54-5a875d5bdb62" name="R_EDTXS1XF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004060 ) OR ( XFCFBP8418_015020 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.-</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cfeb2f99-37cd-4276-ac54-5a875d5bdb62"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.-"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004060"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015020"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hddecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipid4_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_kdo2lipid4HL_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SERAT" metaid="f5fb0f47-8e33-4507-9a9b-1ff077874e4e" name="serine_O_acetyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 2.3.1.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f5fb0f47-8e33-4507-9a9b-1ff077874e4e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acser_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPND" metaid="ac05b5bb-aec3-4b65-899f-cd0db43b95f1" name="prephenate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021200</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 1.3.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac05b5bb-aec3-4b65-899f-cd0db43b95f1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pphn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_34hpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GK1" metaid="_64b44538-0b98-4e14-9b37-8a43ee722e14" name="guanylate_kinase__GMP_ATP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002650</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_64b44538-0b98-4e14-9b37-8a43ee722e14"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LEUabcpp" metaid="_2f7463c0-9137-4d02-a616-6b7f9216f12f" name="L_leucine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2f7463c0-9137-4d02-a616-6b7f9216f12f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_leu_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_leu_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR100" metaid="_7c30b382-8242-4ab9-bd3e-8a33ee49fe78" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C10_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7c30b382-8242-4ab9-bd3e-8a33ee49fe78"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3odecACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hdecACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA120" metaid="dd342e79-834f-45bb-b41c-ea27503d1749" name="Phosphatidylglycerol_synthase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dd342e79-834f-45bb-b41c-ea27503d1749"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdddecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp120_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT181" metaid="e2a02f7a-7ed8-4efb-a6f8-c77334a40727" name="R_G3PAT181" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e2a02f7a-7ed8-4efb-a6f8-c77334a40727"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_octeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1odec11eg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDP" metaid="a30b4cb1-c39f-485d-b604-4468b4e83d36" name="thiamin_pyrophosphatase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003250</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.6.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a30b4cb1-c39f-485d-b604-4468b4e83d36"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thmpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thmmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE2abcpp" metaid="ee7de55c-cb84-47e5-97b0-5eb5fa96d008" name="iron__II__transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009910</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ee7de55c-cb84-47e5-97b0-5eb5fa96d008"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ABUTt2pp" metaid="_0873f427-e010-46ae-a840-180cb283a6e9" name="4_aminobutyrate_transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0873f427-e010-46ae-a840-180cb283a6e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4abut_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4abut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADCL" metaid="_421e0e7b-eb65-4739-b2eb-75149316d48e" name="R_ADCL" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014810</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.3.38</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_421e0e7b-eb65-4739-b2eb-75149316d48e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.38"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4adcho_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4abz_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MSO3tex" metaid="bd3c6ae0-56d8-4f23-987a-2cb585fdf959" name="methanesulfonate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007680 ) OR ( XFCFBP8418_009840 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bd3c6ae0-56d8-4f23-987a-2cb585fdf959"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009840"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mso3_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mso3_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DDGLK" metaid="_5fbef3c5-b93b-4d9c-984d-f6e1c4771e76" name="2_dehydro_3_deoxygluconokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018640</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.45</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5fbef3c5-b93b-4d9c-984d-f6e1c4771e76"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.45"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018640"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ddglcn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2ddg6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PStex" metaid="_05abaed6-9268-45a3-a535-ae3145a6cf90" name="glycerophosphserine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_05abaed6-9268-45a3-a535-ae3145a6cf90"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3ps_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3ps_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DNMPPA" metaid="d68c6357-31ae-4f64-b842-d623ff70f374" name="R_DNMPPA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d68c6357-31ae-4f64-b842-d623ff70f374"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhpmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhnpt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OCTDPS" metaid="_7b300b6d-9a30-4887-843a-eaf6b31bb960" name="Octaprenyl_pyrophosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003680</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.90</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7b300b6d-9a30-4887-843a-eaf6b31bb960"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.90"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_frdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ipdp_c" stoichiometry="5"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_octdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="5"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT180" metaid="_38af430f-3a01-4373-8d04-5804967f5bee" name="R_G3PAT180" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_38af430f-3a01-4373-8d04-5804967f5bee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocdcaACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1odecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADCS" metaid="ffa3c12c-7325-455c-98a8-f7a8129c38bf" name="4_amino_4_deoxychorismate_synthase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026740 AND XFCFBP8418_026750</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.6.1.85</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ffa3c12c-7325-455c-98a8-f7a8129c38bf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.85"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026750"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026740"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_chor_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4adcho_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CAT" metaid="fa3bfb33-f625-44fa-871f-05e8405fde85" name="catalase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020430</p> + <p>SUBSYSTEM: Superoxide_radicals_degradation</p> + <p>EC_NUMBER: 1.11.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fa3bfb33-f625-44fa-871f-05e8405fde85"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.11.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020430"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDCP1pp" metaid="_6de2d860-2eac-437b-98f7-61ce1498d5ea" name="murein_D_D_carboxypeptidase__murein5px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_018620 ) OR ( XFCFBP8418_020420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.16.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6de2d860-2eac-437b-98f7-61ce1498d5ea"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PIabcpp" metaid="_9b5da76b-7854-44f0-bb9b-bd39c77a57b5" name="sn_glycerol_3_phosphoethanolamine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b5da76b-7854-44f0-bb9b-bd39c77a57b5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRA2r" metaid="_20397b20-c6a8-4d60-ab1f-8c57d84dbfd5" name="R_THRA2r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 4.1.2.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_20397b20-c6a8-4d60-ab1f-8c57d84dbfd5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_athr_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acald_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA140abcpp" metaid="_73451555-2031-45ca-8d40-f38b9705fd4c" name="phosphatidate_transport_via_ABC_system__n_C14_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_73451555-2031-45ca-8d40-f38b9705fd4c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pa140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa140_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NADPPPS" metaid="_8642b33f-f57f-4f89-bf54-a52a7bba4577" name="R_NADPPPS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8642b33f-f57f-4f89-bf54-a52a7bba4577"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GF6PTAr" metaid="_55795965-f6a5-4dfd-9b76-36e12c5fb995" name="Glutamine_fructose_6_phosphate_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015350</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.6.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_55795965-f6a5-4dfd-9b76-36e12c5fb995"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gam6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE181abcpp" metaid="d46ef64c-487c-497d-8283-03e2e7a2d0ac" name="phosphatidylethanolamine_transport_via_ABC_system__n_C18_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d46ef64c-487c-497d-8283-03e2e7a2d0ac"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe181_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GALU" metaid="_544cd7d9-e0e5-4a34-b011-adef2e62a0c5" name="UTP_glucose_1_phosphate_uridylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004800</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_544cd7d9-e0e5-4a34-b011-adef2e62a0c5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OHPHM" metaid="_4a26de74-3974-41fa-b3f6-bcec426c17ad" name="2_octaprenyl_6_hydroxyphenol_methylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005180</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.222</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a26de74-3974-41fa-b3f6-bcec426c17ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.222"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2ohph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2omph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_orn_e" metaid="_088ee4bb-574c-4b38-a9c4-209816251311" name="R_EX_orn_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_088ee4bb-574c-4b38-a9c4-209816251311"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_orn_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GMAND" metaid="de5417ed-2086-4f4b-9e9f-6c417ab0def2" name="GDP_D_mannose_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006460</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.47</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#de5417ed-2086-4f4b-9e9f-6c417ab0def2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.47"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006460"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gdpmann_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdpddman_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_asp_L_e" metaid="_76bf29d6-ef42-4e37-92ff-f6a1d3c6af71" name="R_EX_asp_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76bf29d6-ef42-4e37-92ff-f6a1d3c6af71"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_asp_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PFK" metaid="_06084ea6-8cc7-45f2-a738-c1a406c8b1c5" name="phosphofructokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026080</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 2.7.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_06084ea6-8cc7-45f2-a738-c1a406c8b1c5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RZ5PP" metaid="ee88117f-9d1b-4189-a13b-519ac6453e68" name="alpha_ribazole_5_phosphate_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_016540</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.3.73</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ee88117f-9d1b-4189-a13b-519ac6453e68"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.73"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5prdmbz_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_rdmbzi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SHKK" metaid="_2d9d7940-36f9-4f52-b34a-728428042344" name="R_SHKK" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004160</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.7.1.71</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2d9d7940-36f9-4f52-b34a-728428042344"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.71"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004160"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_skm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_skm5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ILETRS" metaid="_7a91f907-41a1-4510-9097-94a0db7c8bd8" name="Isoleucyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004680</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7a91f907-41a1-4510-9097-94a0db7c8bd8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnaile_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ile_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iletrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OAADC" metaid="_76151d46-e9d6-4024-8dab-ff726b55cd2d" name="oxaloacetate_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024720</p> + <p>SUBSYSTEM: Pyruvate_Metabolism</p> + <p>EC_NUMBER: 4.1.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76151d46-e9d6-4024-8dab-ff726b55cd2d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA180" metaid="_111dd9ad-2aa2-4381-b911-a711ed7d11c7" name="Phosphatidylglycerol_synthase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_111dd9ad-2aa2-4381-b911-a711ed7d11c7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdodecg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp180_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CPPPGO" metaid="d2e24363-f133-494a-a677-1b18d8215636" name="coproporphyrinogen_oxidase__O2_required_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014340</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.3.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d2e24363-f133-494a-a677-1b18d8215636"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.3.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_cpppg3_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pppg9_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SELGTHR3" metaid="_107a69f9-5d98-4b62-a714-dc37ee6216be" name="R_SELGTHR3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_107a69f9-5d98-4b62-a714-dc37ee6216be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gslnt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_seln_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALATA_L2" metaid="_45b027a6-2c7d-47ef-8c0d-f5acf5c34a3d" name="alanine_transaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_45b027a6-2c7d-47ef-8c0d-f5acf5c34a3d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pydx5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyam5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SELGTHR2" metaid="_30c97ae2-cdd1-4bbb-8055-d3664764f4a4" name="R_SELGTHR2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_30c97ae2-cdd1-4bbb-8055-d3664764f4a4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dgslnt_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gslnt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALAALAr" metaid="_24c7b076-cdab-4831-b204-b476262b1791" name="D_alanine_D_alanine_ligase__reversible_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011240</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24c7b076-cdab-4831-b204-b476262b1791"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_alaala_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LEUTA" metaid="_05f67c70-fa33-411d-9a41-34703156a6c2" name="leucine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014480</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_05f67c70-fa33-411d-9a41-34703156a6c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4mop_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_leu_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHORD2" metaid="_3ad623d7-86a9-404a-9bd2-2cf74d4619f3" name="dihydoorotic_acid_dehydrogenase__quinone8_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012210</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 1.3.5.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3ad623d7-86a9-404a-9bd2-2cf74d4619f3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.5.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhor_S_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_orot_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DALAt2pp" metaid="_1ff9f0b8-ce7a-42a1-90f1-aeae01fbd231" name="D_alanine_transport_in_via_proton_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1ff9f0b8-ce7a-42a1-90f1-aeae01fbd231"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK120" metaid="_11033452-cc4c-4650-a396-3d597ed06cd1" name="diacylglycerol_kinase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_11033452-cc4c-4650-a396-3d597ed06cd1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr120_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa120_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDCP1Bpp" metaid="_5dbd4070-184a-4621-b940-68cfc8ce8556" name="murein_L_D_carboxypeptidase__murein4p4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5dbd4070-184a-4621-b940-68cfc8ce8556"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4p4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOBDtex" metaid="_9770389f-8fa3-4b15-ba1d-935bf3d71dd5" name="molybdate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9770389f-8fa3-4b15-ba1d-935bf3d71dd5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mobd_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mobd_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_h_e" metaid="_6d564f4a-c974-441f-ae92-d03171c99d4d" name="R_EX_h_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6d564f4a-c974-441f-ae92-d03171c99d4d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA181" metaid="_11a1a22d-37be-440a-a711-ec0fe67162bb" name="Phosphatidylglycerol_synthase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_11a1a22d-37be-440a-a711-ec0fe67162bb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdodec11eg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR80x" metaid="_72f99711-8e3b-4cc9-9323-c8aad8721e38" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C8_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_72f99711-8e3b-4cc9-9323-c8aad8721e38"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_toct2eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ocACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AHC" metaid="_0b7de0b5-f401-4d97-8a9f-8eb9522dddab" name="adenosylhomocysteinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024950</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 3.3.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b7de0b5-f401-4d97-8a9f-8eb9522dddab"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.3.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hcys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_cu2_e" metaid="b7507095-bd33-4161-93c4-eaca0ae599dd" name="R_EX_cu2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b7507095-bd33-4161-93c4-eaca0ae599dd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_cu2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA160abcpp" metaid="_9b0428b8-556c-4454-8bc3-b94c8ff0ea25" name="phosphatidate_transport_via_ABC_system__n_C16_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b0428b8-556c-4454-8bc3-b94c8ff0ea25"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa160_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DTARTD" metaid="_0fb060a3-26e6-4409-8280-0c3cefaeaa6e" name="R_DTARTD" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_016890</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.2.1.81</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0fb060a3-26e6-4409-8280-0c3cefaeaa6e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.81"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tartr_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK140" metaid="cc7f6070-3430-47ce-93f0-9c6d4b2f457b" name="diacylglycerol_kinase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cc7f6070-3430-47ce-93f0-9c6d4b2f457b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GAMptspp" metaid="e0d5d1a3-ddc8-41b4-856f-377ddf310888" name="R_GAMptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e0d5d1a3-ddc8-41b4-856f-377ddf310888"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gam_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gam6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_cl_e" metaid="f8f49550-bbf1-40a3-a701-6d7344888a6b" name="R_EX_cl_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f8f49550-bbf1-40a3-a701-6d7344888a6b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_cl_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ICDHyr2" metaid="f8884270-c678-4594-b521-5da61fd3b43f" name="R_ICDHyr2" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_012420 ) OR ( XFCFBP8418_013290 )</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 1.1.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f8884270-c678-4594-b521-5da61fd3b43f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013290"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012420"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_icit_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_osucc_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ICDHyr1" metaid="_3a6f37a3-e30d-4a3b-8d44-13b859c82de6" name="R_ICDHyr1" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012420 AND XFCFBP8418_013290</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 1.1.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3a6f37a3-e30d-4a3b-8d44-13b859c82de6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013290"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012420"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_osucc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SULRi" metaid="_9f7fedea-e778-446b-bc21-34963625af49" name="sulfite_reductase__NADPH2_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002700 AND XFCFBP8418_002710</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 1.8.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9f7fedea-e778-446b-bc21-34963625af49"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002710"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002700"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="5"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_so3_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_h2s_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GUAtex" metaid="d24cd184-9dfb-47d8-b10d-348f4fd24257" name="R_GUAtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d24cd184-9dfb-47d8-b10d-348f4fd24257"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gua_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gua_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AP4AHr" metaid="_8d72706a-895d-42d5-a37e-40cccdc2ab26" name="Ap4A_hydrolase__reversible" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019500</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8d72706a-895d-42d5-a37e-40cccdc2ab26"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019500"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ap4a_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TPI" metaid="_125ccb2b-525a-42f5-81b7-02d29f5fb24f" name="triose_phosphate_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025760</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 5.3.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_125ccb2b-525a-42f5-81b7-02d29f5fb24f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025760"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_gal_e" metaid="ba58e059-2307-4b18-8399-109a35fb43ae" name="R_EX_gal_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ba58e059-2307-4b18-8399-109a35fb43ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_gal_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G1SAT" metaid="_9d7a712e-8036-4241-b97e-2a49121b73fb" name="glutamate_1_semialdehyde_aminotransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019220</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 5.4.3.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d7a712e-8036-4241-b97e-2a49121b73fb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.3.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019220"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu1sa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5aop_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MALDt2_2pp" metaid="_9d80ccee-607d-48c9-8ca3-0257333fd2c2" name="R_MALDt2_2pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025480</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d80ccee-607d-48c9-8ca3-0257333fd2c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mal_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_mal_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSCVT" metaid="f2421df1-2a4a-40c2-91e7-b4b36d3cdb64" name="R_PSCVT" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021080</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.5.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f2421df1-2a4a-40c2-91e7-b4b36d3cdb64"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_skm5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3psme_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK141" metaid="_97f73aaa-f158-4c0e-aec5-f92f1805f78f" name="diacylglycerol_kinase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97f73aaa-f158-4c0e-aec5-f92f1805f78f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_his_L_e" metaid="_85b6e06f-04c1-444b-ad7e-ed6799502f98" name="R_EX_his_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_85b6e06f-04c1-444b-ad7e-ed6799502f98"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_his_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AIRC3" metaid="ecbfc67d-3b62-4c1b-9c28-271f7d2c6306" name="phosphoribosylaminoimidazole_carboxylase__mutase_rxn_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013040</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 5.44.99.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ecbfc67d-3b62-4c1b-9c28-271f7d2c6306"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.44.99.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013040"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5aizc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5caiz_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA160" metaid="e83a89d6-60a6-4fdf-af63-c21ef4f53c8b" name="Phosphatidylglycerol_synthase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e83a89d6-60a6-4fdf-af63-c21ef4f53c8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdhdecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp160_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLtex" metaid="_29c0101f-cf5a-4dbb-bfd3-56c9a20ff991" name="chloride__Cl_1__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_29c0101f-cf5a-4dbb-bfd3-56c9a20ff991"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cl_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cl_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA161" metaid="af2c3417-84b9-4d18-b71e-5b21a9c40fbd" name="Phosphatidylglycerol_synthase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#af2c3417-84b9-4d18-b71e-5b21a9c40fbd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdhdec9eg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp161_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADPRDP" metaid="_3dd0ab87-7f08-4cbc-b1eb-776e8b53e3d6" name="ADPribose_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015820</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3dd0ab87-7f08-4cbc-b1eb-776e8b53e3d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adprib_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CITt3pp" metaid="_3b77a00f-04d5-425a-b636-33691ff010bf" name="R_CITt3pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3b77a00f-04d5-425a-b636-33691ff010bf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cit_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cit_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK160" metaid="e579cbe8-097c-441e-a6ee-baef4eade8aa" name="diacylglycerol_kinase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e579cbe8-097c-441e-a6ee-baef4eade8aa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_12dgr160_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGM" metaid="fdb69f82-0373-429f-807b-f88bbdc5decf" name="phosphoglycerate_mutase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_016460 ) OR ( XFCFBP8418_016540 ) OR ( XFCFBP8418_027800 )</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 5.4.2.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fdb69f82-0373-429f-807b-f88bbdc5decf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027800"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016540"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2pg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3pg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK161" metaid="_57b3c827-2fa6-4e81-bdb0-6de5f1ef6e6d" name="diacylglycerol_kinase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_57b3c827-2fa6-4e81-bdb0-6de5f1ef6e6d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa161_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGL" metaid="_812b8f84-9415-4423-bf06-846d2009b538" name="6_phosphogluconolactonase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024700</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 3.1.1.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_812b8f84-9415-4423-bf06-846d2009b538"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024700"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_6pgl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_6pgc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FLDR2" metaid="_2953c195-068f-432b-93b0-4f1799543fe8" name="R_FLDR2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_016500 AND XFCFBP9418_023100 ) OR ( XFCFBP8418_027840 AND XFCFBP9418_023100 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2953c195-068f-432b-93b0-4f1799543fe8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP9418_023100"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027840"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP9418_023100"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_flxso_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_flxr_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGK" metaid="_949a5780-a027-4b9b-b6cc-7989c5178314" name="phosphoglycerate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011060</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 2.7.2.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_949a5780-a027-4b9b-b6cc-7989c5178314"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.2.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011060"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3pg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_13dpg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLCt2" metaid="_1faff6b2-1f14-4c76-802e-e8c49a977d16" name="R_GLCt2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018650</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1faff6b2-1f14-4c76-802e-e8c49a977d16"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_glc_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGI" metaid="_26382bd4-e92e-48aa-9edc-9d7820f1cb06" name="glucose_6_phosphate_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026530</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 5.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_26382bd4-e92e-48aa-9edc-9d7820f1cb06"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026530"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACALDtex" metaid="d2ea4b50-f902-4a7b-95c2-550da0ba9fa8" name="R_ACALDtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d2ea4b50-f902-4a7b-95c2-550da0ba9fa8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acald_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acald_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FMNAT" metaid="_2bdf44c5-2cb6-4296-9c5d-5dac7b98b1cf" name="FMN_adenylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004690</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2bdf44c5-2cb6-4296-9c5d-5dac7b98b1cf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DDPA" metaid="a2fb8836-002f-4c28-8bc6-8cf23e5bdac7" name="3_deoxy_D_arabino_heptulosonate_7_phosphate_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014390</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.5.1.54</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a2fb8836-002f-4c28-8bc6-8cf23e5bdac7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.54"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_e4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2dda7p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGSL" metaid="_73e88ab8-feb4-43b9-8bbf-485162c2718d" name="argininosuccinate_lyase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025240</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 4.3.2.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_73e88ab8-feb4-43b9-8bbf-485162c2718d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.2.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_argsuc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PYRt2rtex" metaid="_068a01f8-c04d-4345-b5f5-d8bf4d8d4c07" name="R_PYRt2rtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_068a01f8-c04d-4345-b5f5-d8bf4d8d4c07"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pyr_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_QUINDH" metaid="aa2efde8-2998-4ec0-9559-7a9ca2a9663c" name="Quinate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006320</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.282</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#aa2efde8-2998-4ec0-9559-7a9ca2a9663c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.282"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006320"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_quin_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_3dhq_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HSDy" metaid="db1afa15-7d63-44d6-983a-300bb048428d" name="homoserine_dehydrogenase__NADPH_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020380</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#db1afa15-7d63-44d6-983a-300bb048428d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hom_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_aspsa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGSSr" metaid="_9a2533a8-f05d-4605-871e-87af7ee80f95" name="argininosuccinate_synthase__reversible" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025280</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 6.3.4.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a2533a8-f05d-4605-871e-87af7ee80f95"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025280"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_citr_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_argsuc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDSR2" metaid="c375b01a-4888-4059-b1a1-e8c71408675b" name="R_TDSR2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_006350</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c375b01a-4888-4059-b1a1-e8c71408675b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006350"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dsbgox_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbdrd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dsbdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbgrd_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PTRCtex" metaid="_5db91d6a-04ad-40cb-b1b5-2848ea4e3112" name="putrescine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5db91d6a-04ad-40cb-b1b5-2848ea4e3112"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ptrc_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ptrc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_glyc_e" metaid="_303676b7-c2e0-4189-9634-db8aa9abc05b" name="R_EX_glyc_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_303676b7-c2e0-4189-9634-db8aa9abc05b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUSy" metaid="_946e491d-30ef-4d22-a21c-f94daf2b1f67" name="glutamate_synthase__NADPH_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013350 AND XFCFBP8418_013360</p> + <p>SUBSYSTEM: Glutamate_Metabolism_</p> + <p>EC_NUMBER: 1.4.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_946e491d-30ef-4d22-a21c-f94daf2b1f67"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013360"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013350"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDSR1" metaid="f7f2d2f9-df08-44da-9732-c9e15a1a2499" name="thiol_disulfide_reductase__DsbC_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003390 AND XFCFBP8418_006350</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f7f2d2f9-df08-44da-9732-c9e15a1a2499"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006350"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003390"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dsbcox_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbdrd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dsbcrd_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbdox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYC2Ptex" metaid="_6abfaec7-5d82-4094-807e-05351db886a4" name="sn_Glycerol_2_phosphate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6abfaec7-5d82-4094-807e-05351db886a4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc2p_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc2p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METtex" metaid="e0857c6d-dcd9-4cf5-b3eb-c3ee4d21708b" name="L_methionine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e0857c6d-dcd9-4cf5-b3eb-c3ee4d21708b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_met_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_met_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LEUTRS" metaid="_01e8e603-05fa-4f85-aace-eada9cdc28e4" name="Leucyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019710</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01e8e603-05fa-4f85-aace-eada9cdc28e4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnaleu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_leu_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_leutrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MEOHtrpp" metaid="_9a3cb379-45c8-4d8e-bd23-8f379fc7ff68" name="Methanol_reversible_transport_via_diffusion__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a3cb379-45c8-4d8e-bd23-8f379fc7ff68"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_meoh_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_meoh_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MANtex" metaid="_96653a75-107b-4a14-bcf3-12e782efb8b2" name="R_MANtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96653a75-107b-4a14-bcf3-12e782efb8b2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_man_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_man_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOX1abcpp" metaid="b96939fb-79ad-441c-a13b-77a4dea207dd" name="R_METSOX1abcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b96939fb-79ad-441c-a13b-77a4dea207dd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_metsox_S_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_metsox_S_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOX2tex" metaid="_5f779722-a885-4f0e-a40c-1f4eb862d134" name="R_METSOX2tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f779722-a885-4f0e-a40c-1f4eb862d134"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_metsox_R_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_metsox_R_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PEabcpp" metaid="c63ec343-9b0f-4bd1-acdd-4cf5c0d9da79" name="sn_glycerol_3_phosphoethanolamine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c63ec343-9b0f-4bd1-acdd-4cf5c0d9da79"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pe_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pe_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR60x" metaid="f98904b1-2fec-4b9d-8d23-1ed5d71a8fff" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C6_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f98904b1-2fec-4b9d-8d23-1ed5d71a8fff"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thex2eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hexACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NI2t3tex" metaid="_0fcc3404-73b7-408c-9516-cf5711a5b2d8" name="R_NI2t3tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0fcc3404-73b7-408c-9516-cf5711a5b2d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ni2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ni2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOPG" metaid="_6c1b1e0c-1214-43dc-ae88-48c6e32c6574" name="R_MOPG" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6c1b1e0c-1214-43dc-ae88-48c6e32c6574"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3c4mop_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4mop_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACS" metaid="f82a531b-3cfb-4432-a2a9-fc2b1ea7a29b" name="acetyl_CoA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020630</p> + <p>SUBSYSTEM: Pyruvate_Metabolism</p> + <p>EC_NUMBER: 6.2.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f82a531b-3cfb-4432-a2a9-fc2b1ea7a29b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE60" metaid="f3b291e6-d971-4169-8526-c6cc47f9af28" name="R_FACOAE60" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f3b291e6-d971-4169-8526-c6cc47f9af28"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hxcoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hxa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TKT2" metaid="a875eaae-aebe-409c-bfb2-26d163f234fb" name="transketolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000640</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 2.2.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a875eaae-aebe-409c-bfb2-26d163f234fb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000640"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_xu5p_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_e4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHDPS" metaid="b5cb189a-d585-442f-bd55-649ff74e2a26" name="dihydrodipicolinate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009670</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 4.3.3.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b5cb189a-d585-442f-bd55-649ff74e2a26"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.3.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009670"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_aspsa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_23dhdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TKT1" metaid="e836e051-ab3f-4c80-bc79-1cc08254d046" name="transketolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000640</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 2.2.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e836e051-ab3f-4c80-bc79-1cc08254d046"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000640"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_xu5p_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_s7p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PHETA1" metaid="_87ac1595-703b-4256-851b-cbf43c1556dd" name="phenylalanine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014480</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.58</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_87ac1595-703b-4256-851b-cbf43c1556dd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.58"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phe_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phpyr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE100" metaid="_6b0eb87a-7795-4f00-b3ef-190b2a0ad83c" name="R_FACOAE100" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6b0eb87a-7795-4f00-b3ef-190b2a0ad83c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcacoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dca_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_4PEPTabcpp" metaid="_3d8f4895-48d4-4116-bfd5-088e7038a524" name="tetrapeptide__LalaDgluMdapDala__transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004070 ) OR ( XFCFBP8418_004550 ) OR ( XFCFBP8418_007680 ) OR ( XFCFBP8418_010500 ) OR ( XFCFBP8418_013240 ) OR ( XFCFBP8418_019450 ) OR ( XFCFBP8418_022120 ) OR ( XFCFBP8418_024570 ) OR ( XFCFBP8418_024670 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d8f4895-48d4-4116-bfd5-088e7038a524"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019450"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024570"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013240"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdapDala_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdapDala_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HMPK1" metaid="ef3008e2-953d-4543-82a4-ec97725519db" name="hydroxymethylpyrimidine_kinase__ATP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006340</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.49</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ef3008e2-953d-4543-82a4-ec97725519db"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.49"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ahmmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ampm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DKMPPD" metaid="ccd90c3a-41ed-419a-a0bb-2b355bea1754" name="R_DKMPPD" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ccd90c3a-41ed-419a-a0bb-2b355bea1754"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dkmpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2kmb_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PSabcpp" metaid="e0e6c33a-04e0-41d4-83a0-8545aa8b6f66" name="sn_glycerol_3_phosphoserine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e0e6c33a-04e0-41d4-83a0-8545aa8b6f66"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3ps_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3ps_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HDCAtex" metaid="_5ccf13a2-dbfe-4669-80a1-7789fd33b591" name="Hexadecanoate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ccf13a2-dbfe-4669-80a1-7789fd33b591"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdca_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hdca_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_VALTA" metaid="ab3fe1bd-a74c-4e17-bb7d-2b5c861e2a13" name="valine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001240</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ab3fe1bd-a74c-4e17-bb7d-2b5c861e2a13"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_val_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3mob_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPCDC" metaid="ed9df163-5291-41cb-ac95-96c5bba691c7" name="phosphopantothenoylcysteine_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015430</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.36</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ed9df163-5291-41cb-ac95-96c5bba691c7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.36"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015430"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4ppcys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pan4p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYCLTt4pp" metaid="c88ac52f-c624-4690-8e64-f51c7cf6aabe" name="glycolate_transport_via_sodium_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020610</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c88ac52f-c624-4690-8e64-f51c7cf6aabe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020610"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyclt_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_na1_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyclt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NI2t3pp" metaid="_1e4068e5-51d7-4fd8-a4f4-8dd61624331a" name="nickle__Ni_2__transport_out_via_proton_antiport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010570</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1e4068e5-51d7-4fd8-a4f4-8dd61624331a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ni2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ni2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2O2tpp" metaid="_00f62093-9dbf-428f-bb5f-36cc0c95c0c9" name="hydrogen_peroxide_transport_via_diffusion__periplasm_to_cytoplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00f62093-9dbf-428f-bb5f-36cc0c95c0c9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PDH" metaid="_89f5fa23-9fb3-4857-9262-2dff6e554c93" name="pyruvate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005940 AND XFCFBP8418_010550 AND XFCFBP8418_010560</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_89f5fa23-9fb3-4857-9262-2dff6e554c93"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010550"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010560"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TYRTA" metaid="_1a0f1f58-e6e3-42cf-8c76-5029730e45d4" name="tyrosine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_014480 ) OR ( XFCFBP8418_020310 )</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.57</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1a0f1f58-e6e3-42cf-8c76-5029730e45d4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.57"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020310"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014480"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tyr_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_34hpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTHP" metaid="ed1c2ad2-b573-4550-aaa1-556818013dc1" name="glutathione_peroxidase__c_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010100</p> + <p>SUBSYSTEM: Superoxide_radicals_degradation</p> + <p>EC_NUMBER: 1.11.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ed1c2ad2-b573-4550-aaa1-556818013dc1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.11.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTHS" metaid="_2f3ecbc8-470c-4eb7-9768-26bab3a42633" name="glutathione_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000840</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2f3ecbc8-470c-4eb7-9768-26bab3a42633"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glucys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR180" metaid="_68542414-bf2e-46a6-944f-0ee32746eb97" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_68542414-bf2e-46a6-944f-0ee32746eb97"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3ooctdACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hoctaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR181" metaid="_5f0f1a76-1f64-4e0f-a45f-242afa43424e" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f0f1a76-1f64-4e0f-a45f-242afa43424e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ocvac11eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hcvac11eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_E4PD" metaid="_89a7a200-7abe-4471-bcd7-a5c482b3e7d8" name="Erythrose_4_phosphate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007260</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.2.1.72</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_89a7a200-7abe-4471-bcd7-a5c482b3e7d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.72"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_e4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_4per_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALKP" metaid="_50f0e00d-d655-43c6-82c6-dcd4a2ea5411" name="R_ALKP" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006010</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.3.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_50f0e00d-d655-43c6-82c6-dcd4a2ea5411"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006010"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dha_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UM4PCP" metaid="_82ef8cdc-f8b5-4c23-b88d-60c94ea708d2" name="UDP_N_acetylmuramoyl_L_alanyl_D_gamma_glutamyl_meso_2_6_diaminopimelate_D_alanine_L_D_carboxypeptidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_82ef8cdc-f8b5-4c23-b88d-60c94ea708d2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_um4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ugmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AKGDH" metaid="_7c11985a-84f0-4221-bf6f-e2d48fdb05e1" name="2_Oxoglutarate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002140 AND XFCFBP8418_002150 AND XFCFBP8418_010560</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7c11985a-84f0-4221-bf6f-e2d48fdb05e1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002150"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002140"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010560"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Htex" metaid="_87f9ed1c-6979-4b1d-b0f5-ba4aa7d809be" name="proton_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_87f9ed1c-6979-4b1d-b0f5-ba4aa7d809be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE80" metaid="a6fe5fae-c98c-4143-83a3-fa6cc92188e8" name="R_FACOAE80" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a6fe5fae-c98c-4143-83a3-fa6cc92188e8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_occoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_octa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RIBabcpp" metaid="b282077a-1401-46fa-b1d7-a9dd3b808eaa" name="R_RIBabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b282077a-1401-46fa-b1d7-a9dd3b808eaa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rib_D_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rib_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HISabcpp" metaid="ba31d6cb-e824-4706-9e51-539ef32f482a" name="L_histidine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004750 ) OR ( XFCFBP8418_022890 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ba31d6cb-e824-4706-9e51-539ef32f482a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_his_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_his_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPt2_2tex" metaid="d7e34678-04d4-4e7a-8de6-cc6b0eb0f51e" name="R_ASPt2_2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d7e34678-04d4-4e7a-8de6-cc6b0eb0f51e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_asp_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IZPN" metaid="_5f616904-a689-4932-ac44-22ad74389bd9" name="imidazolonepropionase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 3.5.2.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f616904-a689-4932-ac44-22ad74389bd9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.2.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4izp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_forglu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ENO" metaid="_179a44bc-7464-4c08-a043-29d4c2ba14ef" name="enolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022220</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 4.2.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_179a44bc-7464-4c08-a043-29d4c2ba14ef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022220"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2pg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CO2tex" metaid="_809d6c35-a3db-4775-a2fd-48eafb45eb30" name="CO2_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_809d6c35-a3db-4775-a2fd-48eafb45eb30"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_co2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PERD" metaid="_76242408-fe56-48c6-ba35-5e36fd9d74d9" name="Erythronate_4_phosphate__4per__dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.290</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76242408-fe56-48c6-ba35-5e36fd9d74d9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.290"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4per_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ohpb_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDPXYLS" metaid="_9b1ab803-476c-47f6-b5d0-6bab0d1c3d9d" name="UDP_xylose_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020820</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.35</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b1ab803-476c-47f6-b5d0-6bab0d1c3d9d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.35"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp4kp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpxyl_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSTGL" metaid="c92731bb-f621-47fa-b53b-f050ea82b7b7" name="R_CYSTGL" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010590</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 4.4.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c92731bb-f621-47fa-b53b-f050ea82b7b7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.4.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cyst_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2obut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUCtpp" metaid="_34363cfc-fa7f-4df4-a073-49f5befcdf50" name="R_FUCtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018650</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34363cfc-fa7f-4df4-a073-49f5befcdf50"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_fuc_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fuc_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE120" metaid="_2691931b-9cfe-40d9-95d9-13e4ed057413" name="R_FACOAE120" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2691931b-9cfe-40d9-95d9-13e4ed057413"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ddcacoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ddca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + </listOfReactions> + </model> +</sbml>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/build/tools/SBMLwizard/test-data/XF_network_C_Side.tab Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,6 @@ +M_atp_c +M_h2o_c +M_pi_c +M_adp_c +M_ppi_c +M_h_c
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/build/tools/SBMLwizard/test-data/XF_network_R_Seed.tab Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,2 @@ +R_ACGS +R_GLUN
--- a/build/tools/Sbml2Graph/Sbml2Graph.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/Sbml2Graph/Sbml2Graph.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_Sbml2Graph" name="Sbml2Graph" version="1.3.0"> +<tool id="met4j_Sbml2Graph" name="Sbml2Graph" version="1.4.0"> <description>Create a graph representation of a SBML file content, and export it in graph file format.</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh convert.Sbml2Graph -i "$inputPath" $bipartite
--- a/build/tools/Sbml2Tab/Sbml2Tab.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/Sbml2Tab/Sbml2Tab.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_Sbml2Tab" name="Sbml2Tab" version="1.3.0"> +<tool id="met4j_Sbml2Tab" name="Sbml2Tab" version="1.4.0"> <description>Create a tabulated file from a SBML file</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh convert.Sbml2Tab#if str($i): -i "$i"
--- a/build/tools/SbmlCheckBalance/SbmlCheckBalance.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SbmlCheckBalance/SbmlCheckBalance.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SbmlCheckBalance" name="SbmlCheckBalance" version="1.3.0"> +<tool id="met4j_SbmlCheckBalance" name="SbmlCheckBalance" version="1.4.0"> <description>Check balance of all the reactions in a SBML.</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh reconstruction.SbmlCheckBalance -sbml "$sbml" -out "$out"
--- a/build/tools/SbmlSetChargesFromFile/SbmlSetChargesFromFile.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SbmlSetChargesFromFile/SbmlSetChargesFromFile.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SbmlSetChargesFromFile" name="SbmlSetChargesFromFile" version="1.3.0"> +<tool id="met4j_SbmlSetChargesFromFile" name="SbmlSetChargesFromFile" version="1.4.0"> <description>Set charge to network metabolites from a tabulated file containing the metabolite ids and the formulas</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile#if str($colcharge) != 'nan': -cc "$colcharge"
--- a/build/tools/SbmlSetEcsFromFile/SbmlSetEcsFromFile.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SbmlSetEcsFromFile/SbmlSetEcsFromFile.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SbmlSetEcsFromFile" name="SbmlSetEcsFromFile" version="1.3.0"> +<tool id="met4j_SbmlSetEcsFromFile" name="SbmlSetEcsFromFile" version="1.4.0"> <description>Set EC numbers to reactions from a tabulated file containing the reaction ids and the EC</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.SbmlSetEcsFromFile#if str($colec) != 'nan': -cec "$colec"
--- a/build/tools/SbmlSetFormulasFromFile/SbmlSetFormulasFromFile.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SbmlSetFormulasFromFile/SbmlSetFormulasFromFile.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SbmlSetFormulasFromFile" name="SbmlSetFormulasFromFile" version="1.3.0"> +<tool id="met4j_SbmlSetFormulasFromFile" name="SbmlSetFormulasFromFile" version="1.4.0"> <description>Set Formula to network metabolites from a tabulated file containing the metabolite ids and the formulas</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.SbmlSetFormulasFromFile#if str($colformula) != 'nan': -cf "$colformula"
--- a/build/tools/SbmlSetGprsFromFile/SbmlSetGprsFromFile.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SbmlSetGprsFromFile/SbmlSetGprsFromFile.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SbmlSetGprsFromFile" name="SbmlSetGprsFromFile" version="1.3.0"> +<tool id="met4j_SbmlSetGprsFromFile" name="SbmlSetGprsFromFile" version="1.4.0"> <description>Create a new SBML file from an original sbml file and a tabulated file containing reaction ids and Gene association written in a cobra way</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.SbmlSetGprsFromFile#if str($colgpr) != 'nan': -cgpr "$colgpr"
--- a/build/tools/SbmlSetIdsFromFile/SbmlSetIdsFromFile.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SbmlSetIdsFromFile/SbmlSetIdsFromFile.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SbmlSetIdsFromFile" name="SbmlSetIdsFromFile" version="1.3.0"> +<tool id="met4j_SbmlSetIdsFromFile" name="SbmlSetIdsFromFile" version="1.4.0"> <description>Set new ids to network objects from a tabulated file containing the old ids and the new ids</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile#if str($colname) != 'nan': -cnew "$colname"
--- a/build/tools/SbmlSetNamesFromFile/SbmlSetNamesFromFile.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SbmlSetNamesFromFile/SbmlSetNamesFromFile.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SbmlSetNamesFromFile" name="SbmlSetNamesFromFile" version="1.3.0"> +<tool id="met4j_SbmlSetNamesFromFile" name="SbmlSetNamesFromFile" version="1.4.0"> <description>Set names to network objects from a tabulated file containing the object ids and the names</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.SbmlSetNamesFromFile#if str($colname) != 'nan': -cname "$colname"
--- a/build/tools/SbmlSetPathwaysFromFile/SbmlSetPathwaysFromFile.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SbmlSetPathwaysFromFile/SbmlSetPathwaysFromFile.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SbmlSetPathwaysFromFile" name="SbmlSetPathwaysFromFile" version="1.3.0"> +<tool id="met4j_SbmlSetPathwaysFromFile" name="SbmlSetPathwaysFromFile" version="1.4.0"> <description>Set pathway to reactions in a network from a tabulated file containing the reaction ids and the pathways</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.SbmlSetPathwaysFromFile#if str($colp) != 'nan': -cp "$colp"
--- a/build/tools/SbmlSetRefsFromFile/SbmlSetRefsFromFile.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SbmlSetRefsFromFile/SbmlSetRefsFromFile.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SbmlSetRefsFromFile" name="SbmlSetRefsFromFile" version="1.3.0"> +<tool id="met4j_SbmlSetRefsFromFile" name="SbmlSetRefsFromFile" version="1.4.0"> <description>Add refs to network objects from a tabulated file containing the metabolite ids and the formulas</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.SbmlSetRefsFromFile#if str($colRef) != 'nan': -cr "$colRef"
--- a/build/tools/SbmlToMetaboliteTable/SbmlToMetaboliteTable.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SbmlToMetaboliteTable/SbmlToMetaboliteTable.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SbmlToMetaboliteTable" name="SbmlToMetaboliteTable" version="1.3.0"> +<tool id="met4j_SbmlToMetaboliteTable" name="SbmlToMetaboliteTable" version="1.4.0"> <description>Create a tabulated file with metabolite attributes from a SBML file</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh attributes.SbmlToMetaboliteTable -s "$sbml" -o "$outputFile"
--- a/build/tools/ScopeNetwork/ScopeNetwork.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/ScopeNetwork/ScopeNetwork.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_ScopeNetwork" name="ScopeNetwork" version="1.3.0"> +<tool id="met4j_ScopeNetwork" name="ScopeNetwork" version="1.4.0"> <description>Perform a network expansion from a set of compound seeds to create a scope network</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.ScopeNetwork -i "$sbmlFilePath" -s "$seedsFilePath"
--- a/build/tools/SeedsAndTargets/SeedsAndTargets.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SeedsAndTargets/SeedsAndTargets.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SeedsAndTargets" name="SeedsAndTargets" version="1.3.0"> +<tool id="met4j_SeedsAndTargets" name="SeedsAndTargets" version="1.4.0"> <description>Identify exogenously acquired compounds, producible compounds exogenously available and/or dead ends metabolites from metabolic network topology</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.SeedsAndTargets -i "$inputPath" #if str($inputSide) != 'None':
--- a/build/tools/SideCompoundsScan/SideCompoundsScan.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/SideCompoundsScan/SideCompoundsScan.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_SideCompoundsScan" name="SideCompoundsScan" version="1.3.0"> +<tool id="met4j_SideCompoundsScan" name="SideCompoundsScan" version="1.4.0"> <description>Scan a network to identify side-compounds.</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.SideCompoundsScan -i "$inputPath" $sideOnly
--- a/build/tools/Tab2Sbml/Tab2Sbml.xml Wed May 17 13:26:37 2023 +0000 +++ b/build/tools/Tab2Sbml/Tab2Sbml.xml Tue Jul 04 10:21:26 2023 +0000 @@ -1,11 +1,11 @@ <?xml version="1.0" encoding="UTF-8"?> -<tool id="met4j_Tab2Sbml" name="Tab2Sbml" version="1.3.0"> +<tool id="met4j_Tab2Sbml" name="Tab2Sbml" version="1.4.0"> <description>Create a Sbml File from a tabulated file that contains the reaction ids and the formulas</description> <xrefs> <xref type="bio.tools">met4j</xref> </xrefs> <requirements> - <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.3.0</container> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:1.4.0</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh convert.Tab2Sbml#if str($colid) != 'nan': -ci "$colid"
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/data/XF_network_C_Seed.tab Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,3 @@ +M_glu_D_c +M_xu5p_L_c +M_pep_c
--- a/tests.html Wed May 17 13:26:37 2023 +0000 +++ b/tests.html Tue Jul 04 10:21:26 2023 +0000 @@ -285,7 +285,7 @@ var md = window.markdownit({ html: true, }); - target.innerHTML = md.render(atob('## Test Summary

<div class="progress">
  <div class="progress-bar progress-bar-success" style="width: 100.0%" aria-valuenow="71" aria-valuemin="0" aria-valuemax="71" data-toggle="tooltip" title="71 Passed">
  </div>
  <div class="progress-bar progress-bar-warning" style="width: 0.0%" aria-valuenow="0" aria-valuemin="0" aria-valuemax="71" data-toggle="tooltip" title="0 Skipped">
  </div>
  <div class="progress-bar progress-bar-danger" style="width: 0.0%" aria-valuenow="0" aria-valuemin="0" aria-valuemax="71" title="0 Failed or Errored">
  </div>
</div>

| Test State | Count |
| ---------- | ----- |
| Total      | 71 |
| Passed     | 71 |
| Error      | 0 |
| Failure    | 0 |
| Skipped    | 0 |


<details><summary>Passed Tests</summary>

* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmps32wtb44/files/3/8/9/dataset_389097e8-9425-4780-b822-7b610c750042.dat" -g "/tmp/tmps32wtb44/files/3/9/f/dataset_39f99a72-9298-44df-9e41-ed9559f39941.dat"          -o "/tmp/tmps32wtb44/job_working_directory/000/3/outputs/galaxy_dataset_4e8be8e7-1022-4dbd-90f3-518bc2c1ac43.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Exporting.../tmp/tmps32wtb44/job_working_directory/000/3/outputs/galaxy_dataset_4e8be8e7-1022-4dbd-90f3-518bc2c1ac43.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmps32wtb44/files/8/1/4/dataset_81416088-e3e3-4e5e-ac9d-a6c23c85c8a9.dat" -g "/tmp/tmps32wtb44/files/c/f/d/dataset_cfd4c20c-9ea3-4861-93fb-a6a80c76a686.dat" -ks         -o "/tmp/tmps32wtb44/job_working_directory/000/6/outputs/galaxy_dataset_8dff3dd5-d446-481d-92b1-5eade6ae0f59.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Exporting.../tmp/tmps32wtb44/job_working_directory/000/6/outputs/galaxy_dataset_8dff3dd5-d446-481d-92b1-5eade6ae0f59.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` true ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmps32wtb44/files/0/2/1/dataset_0211b17c-2b02-49ee-8aaf-456d640f120f.dat" -g "/tmp/tmps32wtb44/files/0/5/5/dataset_0553e789-9632-4322-bb94-a874a0a07064.dat"  -mc        -o "/tmp/tmps32wtb44/job_working_directory/000/9/outputs/galaxy_dataset_89b42361-ab2d-48bf-a5ea-98bab0b01f05.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Merging compartments... Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
       Done.
      Exporting.../tmp/tmps32wtb44/job_working_directory/000/9/outputs/galaxy_dataset_89b42361-ab2d-48bf-a5ea-98bab0b01f05.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` true ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #4)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmps32wtb44/files/8/b/8/dataset_8b87123e-17e6-4d91-ac10-ed51bcd26985.dat" -g "/tmp/tmps32wtb44/files/1/2/e/dataset_12e76923-53bc-4c82-ac04-e8fce8e6733c.dat"   -me       -o "/tmp/tmps32wtb44/job_working_directory/000/12/outputs/galaxy_dataset_d4c59eda-0fce-4d1d-a10f-ba09016d5f86.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Merging edges... Done.
      Exporting.../tmp/tmps32wtb44/job_working_directory/000/12/outputs/galaxy_dataset_d4c59eda-0fce-4d1d-a10f-ba09016d5f86.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` true ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #5)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmps32wtb44/files/f/9/0/dataset_f90bbb81-e47a-4099-a2ab-7e0095bf78e0.dat" -g "/tmp/tmps32wtb44/files/2/b/c/dataset_2bc43214-2fe1-4db7-9c62-b6b31d1cb507.dat"    -ri      -o "/tmp/tmps32wtb44/job_working_directory/000/15/outputs/galaxy_dataset_b3cd4ac8-f2b7-46df-80c2-5986c4b137e4.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph
      16 isolated nodes removed 

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Remove isolated nodes...
      	removing galactose
      	removing H2O
      	removing H2O
      	removing PPi
      	removing H+
      	removing fructose-3-phosphate
      	removing fructose
      	removing H+
      	removing H2O
      	removing 3-keto-beta-D-galactose
      	removing H2O
      	removing H+
      	removing H+
      	removing CO2
      	removing Pi
      	removing CO2
       Done.
      Exporting.../tmp/tmps32wtb44/job_working_directory/000/15/outputs/galaxy_dataset_b3cd4ac8-f2b7-46df-80c2-5986c4b137e4.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` true ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #6)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmps32wtb44/files/a/2/9/dataset_a2922ac1-e80c-45ff-ac90-cfee1258c253.dat" -g "/tmp/tmps32wtb44/files/2/c/9/dataset_2c939d65-3b74-4af3-8f70-d1d90a9365b5.dat"     -un     -o "/tmp/tmps32wtb44/job_working_directory/000/18/outputs/galaxy_dataset_5ebb3957-09a3-4b2e-a567-00d523642148.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Create Undirected... Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Exporting.../tmp/tmps32wtb44/job_working_directory/000/18/outputs/galaxy_dataset_5ebb3957-09a3-4b2e-a567-00d523642148.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` true ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #7)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmps32wtb44/files/d/0/7/dataset_d076fd56-a699-4899-a230-7ba9e7b38909.dat" -g "/tmp/tmps32wtb44/files/d/7/4/dataset_d74b95d1-59ee-40a2-b986-078b0ecad0c2.dat"       -am   -o "/tmp/tmps32wtb44/job_working_directory/000/21/outputs/galaxy_dataset_17cf3938-e808-45df-8dd9-f395b5999549.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Exporting... Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` true ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #8)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmps32wtb44/files/f/8/6/dataset_f8690942-11e1-4956-bf06-7657d57bb7c1.dat" -g "/tmp/tmps32wtb44/files/3/1/b/dataset_31b1b2d3-ed50-426f-9cf1-7e75275a29eb.dat"         -i -o "/tmp/tmps32wtb44/job_working_directory/000/24/outputs/galaxy_dataset_76063ba1-5093-483f-b4cc-13a66eb893d6.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      206 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Exporting.../tmp/tmps32wtb44/job_working_directory/000/24/outputs/galaxy_dataset_76063ba1-5093-483f-b4cc-13a66eb893d6.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` true ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ChokePoint (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ChokePoint -i "/tmp/tmps32wtb44/files/6/9/5/dataset_6955d0a6-cec1-4e1c-85a7-406bfa5c2b30.dat" -o "/tmp/tmps32wtb44/job_working_directory/000/26/outputs/galaxy_dataset_554918e3-7468-44d0-a22a-605492a5d242.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      Computing load points...
      Export results...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ChokePoint (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ChokePoint -i "/tmp/tmps32wtb44/files/a/3/2/dataset_a328647f-46e9-467e-85c8-ee3cb0b6d3e9.dat" -s "/tmp/tmps32wtb44/files/4/0/4/dataset_404aaf4e-f914-4648-b169-0874776de6ed.dat" -o "/tmp/tmps32wtb44/job_working_directory/000/29/outputs/galaxy_dataset_aa2d926b-3cc1-405b-ace6-138602208d80.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      removing side compounds...
      4 compounds removed.
      Computing load points...
      Export results...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CompoundNet (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CompoundNet -s "/tmp/tmps32wtb44/files/f/4/0/dataset_f40d18da-3715-444c-8f06-96b5d68b8b46.dat" -sc "/tmp/tmps32wtb44/files/1/0/6/dataset_106740ed-aac4-4ac9-8412-90487eec0309.dat" -mc "no"       -o "/tmp/tmps32wtb44/job_working_directory/000/32/outputs/galaxy_dataset_758e7eab-a35b-4ec8-ad4f-9af114946e9c.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model Xfm1158
      removing side compounds...
      6 compounds removed.

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
       Done.
      Exporting.../tmp/tmps32wtb44/job_working_directory/000/32/outputs/galaxy_dataset_758e7eab-a35b-4ec8-ad4f-9af114946e9c.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | mergingStrat | ` "no" ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | degree | ` false ` |
       | weightFile | ` None ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CompoundNet (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CompoundNet -s "/tmp/tmps32wtb44/files/f/1/2/dataset_f126c625-bda9-4ad9-b46b-2da4c4021963.dat" -sc "/tmp/tmps32wtb44/files/d/4/b/dataset_d4b3e276-e303-4f33-bae9-4796b5b1f7d7.dat" -mc "by_id"  -ri -dw -un -tp  -o "/tmp/tmps32wtb44/job_working_directory/000/35/outputs/galaxy_dataset_2e0a83dc-4464-4f2a-8979-5c770fbc6951.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model Xfm1158
      removing side compounds...
      6 compounds removed.
      Setting edge weights (target degree)...
      12 isolated nodes removed 

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
       Done.
      Create Undirected... Done.
       Done.
      Merging compartments... Done.
      Remove isolated nodes...
      	removing sn_Glycero_3_phospho_1_inositol
      	removing methanesulfonate
      	removing sn_Glycero_3_phosphocholine
      	removing P1_P4_Bis_5__adenosyl__tetraphosphate
      	removing Glycerophosphoglycerol
      	removing M_cys_D_c
      	removing P1_P5_Bis_5__adenosyl__pentaphosphate
      	removing sn_Glycero_3_phosphoethanolamine
      	removing M_s_c
      	removing Glycerophosphoserine
      	removing M_met_D_c
      	removing D_Glyceraldehyde
       Done.
      Compute transition matrix... Done.
      Exporting.../tmp/tmps32wtb44/job_working_directory/000/35/outputs/galaxy_dataset_2e0a83dc-4464-4f2a-8979-5c770fbc6951.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | mergingStrat | ` "by_id" ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` true ` |
       | degree | ` true ` |
       | weightFile | ` None ` |
       | undirected | ` true ` |
       | computeWeight | ` true ` |
       | asMatrix | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_DecomposeSBML (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.DecomposeSBML -i "/tmp/tmps32wtb44/files/2/1/f/dataset_21fdb004-6ce4-4181-8250-0ccd2358e58b.dat"       -o "/tmp/tmps32wtb44/job_working_directory/000/37/outputs/galaxy_dataset_3a16bb55-bac4-4457-9b82-5f0c7c4853e9.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model HumanGEM

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | printMetabolites | ` false ` |
       | printReactions | ` false ` |
       | printCompartments | ` false ` |
       | printPathways | ` false ` |
       | printGenes | ` false ` |
       | noTypeCol | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_DecomposeSBML (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.DecomposeSBML -i "/tmp/tmps32wtb44/files/9/a/e/dataset_9aee7c97-c8b7-453b-8107-a0afce9d013f.dat" -m -r -c  -g -nt -o "/tmp/tmps32wtb44/job_working_directory/000/39/outputs/galaxy_dataset_f527f9a2-3daf-4e4c-9232-d38323cd26e3.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model HumanGEM

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | printMetabolites | ` true ` |
       | printReactions | ` true ` |
       | printCompartments | ` true ` |
       | printPathways | ` false ` |
       | printGenes | ` true ` |
       | noTypeCol | ` true ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_DistanceMatrix (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.DistanceMatrix -i "/tmp/tmps32wtb44/files/1/4/3/dataset_143ed27c-00da-4f31-a57f-d35a234a2e2e.dat"   -o "/tmp/tmps32wtb44/job_working_directory/000/41/outputs/galaxy_dataset_3f97fc74-f117-4654-83fa-831cd3eebfd6.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | seedFile | ` None ` |
       | degree | ` false ` |
       | weightFile | ` None ` |
       | undirected | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_DistanceMatrix (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.DistanceMatrix -i "/tmp/tmps32wtb44/files/9/6/8/dataset_9689b895-ef21-494b-ad87-3f7b78496ad9.dat" -sc "/tmp/tmps32wtb44/files/6/d/5/dataset_6d549439-de09-4c2c-a766-4d678b4cffd1.dat" -dw -u -o "/tmp/tmps32wtb44/job_working_directory/000/44/outputs/galaxy_dataset_44770fa9-e762-488c-9ee2-4a7818c44c81.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      removing side compounds...
      1 side compounds ignored during graph build.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | seedFile | ` None ` |
       | degree | ` true ` |
       | weightFile | ` None ` |
       | undirected | ` true ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractPathways (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.ExtractPathways -i "/tmp/tmps32wtb44/files/c/a/5/dataset_ca5aa462-cbab-43cd-a8a7-a48132e49127.dat" -p "Citric_Acid_Cycle+Folate_Metabolism+toto" -o "/tmp/tmps32wtb44/job_working_directory/000/46/outputs/galaxy_dataset_467e0e20-1ccf-4645-afc3-8dd6e081db47.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Parsing Bionetwork Xfm1158
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...
      network exported.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Number of reactions in original network: 1158
      Number of species in original network: 1107
      Number of genes in original network: 572
      Number of reactions in pathway Citric_Acid_Cycle (Citric_Acid_Cycle): 11
      Number of species in pathway Citric_Acid_Cycle (Citric_Acid_Cycle): 26
      Number of genes in pathway Citric_Acid_Cycle (Citric_Acid_Cycle): 18
      Number of reactions in pathway Folate_Metabolism (Folate_Metabolism): 6
      Number of species in pathway Folate_Metabolism (Folate_Metabolism): 16
      Number of genes in pathway Folate_Metabolism (Folate_Metabolism): 8
      Error: Pathway toto not found in network, please check sbml file.
      Number of reactions in network: 17
      Number of species in network: 35
      Number of genes in network: 25

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | pathwayId | ` "Citric_Acid_Cycle+Folate_Metabolism+toto" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSbmlAnnot (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.ExtractSbmlAnnot -i "/tmp/tmps32wtb44/files/8/d/0/dataset_8d0347c1-e36d-41b8-a226-ca3b514282e5.dat" -export "METABOLITE" -db "metanetx.chemical"   -o "/tmp/tmps32wtb44/job_working_directory/000/48/outputs/galaxy_dataset_5db13685-ce4f-47ef-8221-d3ec9c30e4cd.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model HumanGEM

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      annotations found for 110/111 metabolites

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | export | ` "METABOLITE" ` |
       | db | ` "metanetx.chemical" ` |
       | uniq | ` false ` |
       | skip | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSbmlAnnot (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.ExtractSbmlAnnot -i "/tmp/tmps32wtb44/files/0/a/e/dataset_0aea6743-17ab-4bf3-8158-99a419279ab1.dat" -export "METABOLITE" -db "metanetx.chemical"  -skip -o "/tmp/tmps32wtb44/job_working_directory/000/50/outputs/galaxy_dataset_2cde5680-4d31-4d23-b591-393a01736286.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model HumanGEM

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      annotations found for 110/111 metabolites

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | export | ` "METABOLITE" ` |
       | db | ` "metanetx.chemical" ` |
       | uniq | ` false ` |
       | skip | ` true ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSbmlAnnot (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.ExtractSbmlAnnot -i "/tmp/tmps32wtb44/files/8/d/a/dataset_8da84c45-aae6-41ec-af6c-6a30f453f708.dat" -export "METABOLITE" -db "metanetx.chemical" -uniq -skip -o "/tmp/tmps32wtb44/job_working_directory/000/52/outputs/galaxy_dataset_cad6663e-5fd3-4b55-9f3a-a62bec83762f.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model HumanGEM

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      annotations found for 110/111 metabolites

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | export | ` "METABOLITE" ` |
       | db | ` "metanetx.chemical" ` |
       | uniq | ` true ` |
       | skip | ` true ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSubBipNetwork (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ExtractSubBipNetwork -i "/tmp/tmps32wtb44/files/4/1/c/dataset_41c97740-b33f-4c6d-9d84-4512e1b5e96e.dat" -s "/tmp/tmps32wtb44/files/b/7/5/dataset_b7522373-4e1e-4f48-b3f7-d0016e3bf184.dat" -t "/tmp/tmps32wtb44/files/2/9/2/dataset_292cdb27-a88f-4aa8-ba8e-e90ff94ddb05.dat"   -sc "/tmp/tmps32wtb44/files/1/1/b/dataset_11baf17d-b776-4b9c-a32c-abea572e84b0.dat" -k "1"  -o "/tmp/tmps32wtb44/job_working_directory/000/57/outputs/galaxy_dataset_784d9f94-e9b2-4ed3-bcfa-af87307833f4.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      importing side compounds...
      extracting sources and targets

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmps32wtb44/job_working_directory/000/57/outputs/galaxy_dataset_784d9f94-e9b2-4ed3-bcfa-af87307833f4.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | undirected | ` false ` |
       | asTable | ` false ` |
       | blkdReactionFile | ` None ` |
       | weightFile | ` None ` |
       | k | ` "1" ` |
       | st | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSubNetwork (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ExtractSubNetwork -i "/tmp/tmps32wtb44/files/3/c/3/dataset_3c34061f-fdc4-4e0e-a33b-4c2978b6cc5a.dat" -s "/tmp/tmps32wtb44/files/5/2/2/dataset_522ee7df-6b7e-4ece-a658-584e304e3241.dat" -t "/tmp/tmps32wtb44/files/d/2/9/dataset_d29953a1-9cc4-40b2-805c-8770616c603f.dat"     -k "1"  -o "/tmp/tmps32wtb44/job_working_directory/000/61/outputs/galaxy_dataset_b0a3f82a-f4bd-4494-9b22-fb60aed709dc.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      extracting sources and targets

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmps32wtb44/job_working_directory/000/61/outputs/galaxy_dataset_b0a3f82a-f4bd-4494-9b22-fb60aed709dc.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | degree | ` false ` |
       | weightFile | ` None ` |
       | chemicalSim | ` false ` |
       | undirected | ` false ` |
       | asTable | ` false ` |
       | k | ` "1" ` |
       | st | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSubReactionNetwork (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ExtractSubReactionNetwork -i "/tmp/tmps32wtb44/files/3/e/9/dataset_3e978133-8185-4215-aab3-a11269d9238a.dat" -s "/tmp/tmps32wtb44/files/4/9/b/dataset_49bd7b18-37a1-42b6-8300-4b003dfd8198.dat"   -t "/tmp/tmps32wtb44/files/e/5/2/dataset_e521a355-d93b-4cbb-8d40-7172fee5e500.dat" -sc "/tmp/tmps32wtb44/files/4/2/b/dataset_42b5d47b-f77d-424f-afe7-ef57322aaf6f.dat" -k "1"  -o "/tmp/tmps32wtb44/job_working_directory/000/66/outputs/galaxy_dataset_148784c4-8465-441c-bf86-7a9fa72a48c7.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      importing side compounds...
      0 side compounds ignored during graph build.
      extracting sources and targets

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmps32wtb44/job_working_directory/000/66/outputs/galaxy_dataset_148784c4-8465-441c-bf86-7a9fa72a48c7.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | undirected | ` false ` |
       | asTable | ` false ` |
       | weightFile | ` None ` |
       | k | ` "1" ` |
       | st | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_FbcToNotes (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.FbcToNotes -i "/tmp/tmps32wtb44/files/f/7/3/dataset_f73e04d1-3d72-4e8d-b9ff-1cb49fc2f35a.dat" -o "/tmp/tmps32wtb44/job_working_directory/000/68/outputs/galaxy_dataset_2f90dbbd-d66b-4d69-ac3a-f37dd5c3cb4f.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model iML1515
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model iML1515
      Parsing Bionetwork iML1515
      Generating Pathways...
      Generating Model Annotations...
      Bad property in annotations: hasProperty, set to HAS_PROPERTY
      Bad property in annotations: hasProperty, set to HAS_PROPERTY
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_GetGenesFromReactions (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.GetGenesFromReactions -i "/tmp/tmps32wtb44/files/5/0/8/dataset_50884d7c-0b2d-4ee2-832f-fc8e1ca9bf8f.dat" -r "/tmp/tmps32wtb44/files/b/3/f/dataset_b3f3579f-8833-4104-9efb-20fb9b317e7b.dat" -sep "	"  -col "1" -o "/tmp/tmps32wtb44/job_working_directory/000/71/outputs/galaxy_dataset_16707d6c-d828-464a-8647-285c50697b23.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 reactions mapped
      0 reactions not found in model

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sep | ` "\t" ` |
       | hasHeader | ` false ` |
       | i | ` "1" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_GetModelProteome (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh bigg.GetModelProteome -m "e_coli_core" -o "/tmp/tmps32wtb44/job_working_directory/000/72/outputs/galaxy_dataset_7fd1b55c-2fe4-48bd-9a59-e6c1bc50b59c.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | modelId | ` "e_coli_core" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "data" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_GetReactantsFromReactions (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.GetReactantsFromReactions -i "/tmp/tmps32wtb44/files/5/b/b/dataset_5bbc3de2-9bd5-490b-a9e5-530230a1c224.dat" -r "/tmp/tmps32wtb44/files/3/0/8/dataset_30804ad9-a971-437e-bd43-7b96c4ab38f9.dat" -sep "	"  -col "1"   -o "/tmp/tmps32wtb44/job_working_directory/000/75/outputs/galaxy_dataset_f29ec60e-0d4b-4dfc-bcbd-f5266020cb44.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 reactions mapped
      0 reactions not found in model

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sep | ` "\t" ` |
       | hasHeader | ` false ` |
       | i | ` "1" ` |
       | printSubstrates | ` false ` |
       | printProducts | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_GetReactantsFromReactions (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.GetReactantsFromReactions -i "/tmp/tmps32wtb44/files/c/1/1/dataset_c117f3b4-eb21-405e-8c55-6ce66ca1f70e.dat" -r "/tmp/tmps32wtb44/files/c/2/4/dataset_c24780e1-c024-4843-bcce-8567ceb2b1d2.dat" -sep "	"  -col "1" -s  -o "/tmp/tmps32wtb44/job_working_directory/000/78/outputs/galaxy_dataset_7afb8705-2d80-422e-b362-62524a984c2b.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 reactions mapped
      0 reactions not found in model

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sep | ` "\t" ` |
       | hasHeader | ` false ` |
       | i | ` "1" ` |
       | printSubstrates | ` true ` |
       | printProducts | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_GetReactantsFromReactions (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.GetReactantsFromReactions -i "/tmp/tmps32wtb44/files/7/3/2/dataset_7322a4fd-d9ac-47c9-9f7e-075171ab2eda.dat" -r "/tmp/tmps32wtb44/files/3/a/0/dataset_3a0d4c38-3a7c-46ee-b8d5-3a5e9f597b2b.dat" -sep "	"  -col "1"  -p -o "/tmp/tmps32wtb44/job_working_directory/000/81/outputs/galaxy_dataset_a0d278e1-ea38-44f6-8572-ea3eabb8b2a7.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 reactions mapped
      0 reactions not found in model

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sep | ` "\t" ` |
       | hasHeader | ` false ` |
       | i | ` "1" ` |
       | printSubstrates | ` false ` |
       | printProducts | ` true ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_LoadPoint (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.LoadPoint -i "/tmp/tmps32wtb44/files/7/5/f/dataset_75ff3fb9-c6ce-406b-b42a-0c5241f7dc55.dat" -k "1" -o "/tmp/tmps32wtb44/job_working_directory/000/83/outputs/galaxy_dataset_9b7e565f-9df6-4e83-904c-48c0c3091f5a.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      Creating network...
      Computing load points...
      Export results...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | k | ` "1" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_NetworkSummary (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.NetworkSummary -i "/tmp/tmps32wtb44/files/5/7/c/dataset_57c79647-ffda-47f2-94ee-0f61f6e7d09b.dat"   -o "/tmp/tmps32wtb44/job_working_directory/000/85/outputs/galaxy_dataset_48bb4a7b-dcf5-40f8-b945-df5e8e008e26.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      Creating network...
      perform basic analysis...
      extract connected component...
      Compute density...
      Compute local clustering coefficients...
      Compute degree statistics...
      Compute distances...
      Compute distances statistics...
      Compute centrality...
      	Closeness done.
      Done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | skipdist | ` false ` |
       | directed | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_PrecursorNetwork (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.PrecursorNetwork -i "/tmp/tmps32wtb44/files/c/1/2/dataset_c12c0a21-da11-44a4-a54c-c96e213c02e8.dat" -t "/tmp/tmps32wtb44/files/8/c/f/dataset_8cf0be7b-2668-4669-9243-5a042242f594.dat"  -o "/tmp/tmps32wtb44/job_working_directory/000/88/outputs/galaxy_dataset_c2e1ff8c-1715-4626-b6cc-d4b856454153.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmps32wtb44/job_working_directory/000/88/outputs/galaxy_dataset_c2e1ff8c-1715-4626-b6cc-d4b856454153.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | reactionToIgnoreFile | ` None ` |
       | asTable | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Sbml2Graph (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Sbml2Graph -i "/tmp/tmps32wtb44/files/a/9/7/dataset_a97b60b9-dd36-4151-a3e1-14d722fa7a3e.dat"  -c   -gml -o "/tmp/tmps32wtb44/job_working_directory/000/90/outputs/galaxy_dataset_e571d78f-c9e4-4778-a554-945082b410fd.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmps32wtb44/job_working_directory/000/90/outputs/galaxy_dataset_e571d78f-c9e4-4778-a554-945082b410fd.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | bipartite | ` false ` |
       | compound | ` true ` |
       | reaction | ` false ` |
       | tab | ` false ` |
       | gml | ` true ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Sbml2Graph (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Sbml2Graph -i "/tmp/tmps32wtb44/files/c/3/3/dataset_c33b785e-5226-41e2-af62-b16d04c1a971.dat" -b    -gml -o "/tmp/tmps32wtb44/job_working_directory/000/92/outputs/galaxy_dataset_6e4e1b1b-5565-4851-ad57-7646a1eac76c.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmps32wtb44/job_working_directory/000/92/outputs/galaxy_dataset_6e4e1b1b-5565-4851-ad57-7646a1eac76c.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | bipartite | ` true ` |
       | compound | ` false ` |
       | reaction | ` false ` |
       | tab | ` false ` |
       | gml | ` true ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Sbml2Graph (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Sbml2Graph -i "/tmp/tmps32wtb44/files/0/b/a/dataset_0ba6f956-f7fd-4631-b5e9-1acbe6c8a9c0.dat"   -r  -gml -o "/tmp/tmps32wtb44/job_working_directory/000/94/outputs/galaxy_dataset_6d5bf036-4de3-4a30-ad1c-cdec4b9843be.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmps32wtb44/job_working_directory/000/94/outputs/galaxy_dataset_6d5bf036-4de3-4a30-ad1c-cdec4b9843be.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | bipartite | ` false ` |
       | compound | ` false ` |
       | reaction | ` true ` |
       | tab | ` false ` |
       | gml | ` true ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Sbml2Tab (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Sbml2Tab -i "-->" -r "<==>" -in "/tmp/tmps32wtb44/files/a/7/8/dataset_a782ce5d-b1a4-4207-aba4-cdca004ba518.dat" -out "/tmp/tmps32wtb44/job_working_directory/000/96/outputs/galaxy_dataset_9d176448-a060-4791-b3fc-8305b813f37b.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | i | ` "-->" ` |
       | r | ` "<==>" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Sbml2Tab (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Sbml2Tab -i "->" -r "=" -in "/tmp/tmps32wtb44/files/0/0/1/dataset_001cb3c5-0120-4d08-943c-8119374dcd60.dat" -out "/tmp/tmps32wtb44/job_working_directory/000/98/outputs/galaxy_dataset_5007f577-0e07-4133-b861-3390870f11a1.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | i | ` "->" ` |
       | r | ` "=" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetChargesFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile -cc "2" -ci "1"   -n "0" -sbml "/tmp/tmps32wtb44/files/0/4/c/dataset_04cb2b5c-c55e-4fcd-b388-d8942a1699bc.dat" -tab "/tmp/tmps32wtb44/files/8/8/9/dataset_88962c5a-e7d5-493c-855f-8833318fe535.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/101/outputs/galaxy_dataset_14a1b9b8-6efb-4c49-b017-aa91a8834eb1.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _1242330b_83d3_42a7_869f_81f39b1540d2
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colcharge | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetChargesFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile -cc "2" -ci "1"   -n "0" -sbml "/tmp/tmps32wtb44/files/3/0/8/dataset_308a49c8-a750-42b8-99a4-956fc282c7e2.dat" -tab "/tmp/tmps32wtb44/files/4/a/e/dataset_4aeda976-f009-45f3-9762-94a57d5992c9.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/104/outputs/galaxy_dataset_47c1e5c8-32f0-4b7f-97de-58fc066bfea5.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      1 attributions
      Parsing Bionetwork _646dc8b5_c219_40e6_a1ab_0d256f959605
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colcharge | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetChargesFromFile (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile -cc "2" -ci "1"   -n "1" -sbml "/tmp/tmps32wtb44/files/b/6/d/dataset_b6d12989-0c27-476a-987c-a006a8801a03.dat" -tab "/tmp/tmps32wtb44/files/c/1/f/dataset_c1f309f1-5624-4c0d-a08f-09f662c4cb80.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/107/outputs/galaxy_dataset_bb2b7e0a-da72-4bb7-8f57-b23174123482.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      1 attributions
      Parsing Bionetwork _4e43196c_b097_4d2b_bc63_8654475c9646
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colcharge | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "1" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetChargesFromFile (Test #4)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile -cc "2" -ci "1"   -n "0" -sbml "/tmp/tmps32wtb44/files/e/4/c/dataset_e4cf3d8e-afb5-4b5d-ac6d-04aa0b111f4b.dat" -tab "/tmp/tmps32wtb44/files/c/a/e/dataset_caebfaaa-c803-410f-89e9-1214c5fd32fd.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/110/outputs/galaxy_dataset_528afd70-54b1-42ec-9e3d-5581f32e895a.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _a70d8140_740a_410c_80a6_b8a51bb3e26b
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colcharge | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetChargesFromFile (Test #5)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile -cc "2" -ci "1" -p -s -n "0" -sbml "/tmp/tmps32wtb44/files/a/3/8/dataset_a388ade8-d398-441e-b8de-4eeb90bf0e94.dat" -tab "/tmp/tmps32wtb44/files/4/2/6/dataset_42679144-223a-46b8-a2ec-07aa6cddc24c.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/113/outputs/galaxy_dataset_c5562bbf-c1fe-440c-addf-be779239a809.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      3 attributions
      Parsing Bionetwork Xfm1158
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Pathways...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colcharge | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` true ` |
       | s | ` true ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetEcsFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetEcsFromFile -cec "2" -ci "1"  -n "0" -sbml "/tmp/tmps32wtb44/files/a/5/7/dataset_a570cc5b-7b39-4f1e-bd08-f54c851b31aa.dat" -tab "/tmp/tmps32wtb44/files/4/2/6/dataset_42664653-f023-4575-84f6-05c7b1445973.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/116/outputs/galaxy_dataset_599d01d9-37e7-4cbf-81d6-64cd8aef925d.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 reactions processed
      Parsing Bionetwork _48ffaf54_fb7a_4772_89d5_94f417f9e261
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colec | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetEcsFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetEcsFromFile -cec "2" -ci "1"  -n "0" -sbml "/tmp/tmps32wtb44/files/5/3/9/dataset_539aac56-d7b9-4bd7-bb78-af59b7ac5d3c.dat" -tab "/tmp/tmps32wtb44/files/9/6/a/dataset_96a202ee-5ce0-4cb3-a6a1-006376b48eb4.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/119/outputs/galaxy_dataset_020085b8-3172-4285-a505-b032a0aa6457.dat"
      ```
    **Exit Code:**

    * ```console
      1
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      ********
      [Warning]Attribute "1.2.3.4.5" not well formatted
      ********
      Error in setting ECs

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colec | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetFormulasFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetFormulasFromFile -cf "2" -ci "1"   -n "0" -sbml "/tmp/tmps32wtb44/files/e/3/4/dataset_e344a6ae-1e96-4e19-8f71-4289f5ad82f0.dat" -tab "/tmp/tmps32wtb44/files/4/1/e/dataset_41e193b5-73a0-4721-b946-a69bcd39c0d8.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/122/outputs/galaxy_dataset_31ddea10-04a1-4847-a4d0-007d2d62dbdc.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _74fb0318_8a52_4cb8_9737_b6f250c3b297
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colformula | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetFormulasFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetFormulasFromFile -cf "2" -ci "1"   -n "0" -sbml "/tmp/tmps32wtb44/files/1/d/8/dataset_1d837875-c649-4108-bb74-4583350380d1.dat" -tab "/tmp/tmps32wtb44/files/b/a/6/dataset_ba60d18e-f3c2-40e5-8ee5-a321910a2c2b.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/125/outputs/galaxy_dataset_af97a658-fb06-466e-ba3a-f8d3bf324453.dat"
      ```
    **Exit Code:**

    * ```console
      1
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      ********
      [Warning]Attribute "12CH4O" not well formatted
      ********
      Error in SbmlSetFormula

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colformula | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetGprsFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetGprsFromFile -cgpr "2" -ci "1"  -n "0" -sbml "/tmp/tmps32wtb44/files/4/4/f/dataset_44fc115f-c74a-4f66-8ff8-9e0d756f1919.dat" -tab "/tmp/tmps32wtb44/files/8/b/6/dataset_8b62f802-cc30-479a-915f-f8d0ccbe98e7.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/128/outputs/galaxy_dataset_b6ff3d78-2fcf-4616-bf39-03aff5347732.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 gene associations created
      Parsing Bionetwork _11ba5784_a58c_4707_bbff_47160d533c8c
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colgpr | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetIdsFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile -cnew "2" -ci "1"   -o "METABOLITE" -n "0" -sbml "/tmp/tmps32wtb44/files/2/f/e/dataset_2fe084b3-3a06-4e6e-80c7-a4ac0ff8ede1.dat" -tab "/tmp/tmps32wtb44/files/8/4/6/dataset_84697eca-3b82-4adc-a942-13ccde0c68fb.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/131/outputs/galaxy_dataset_3d2490b6-6d3b-4ef8-824a-c74319ed6899.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 entities processed
      Parsing Bionetwork _4d480b46_38f3_4041_bd0f_ab2aa87a90d1
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "METABOLITE" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetIdsFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile -cnew "2" -ci "1"   -o "REACTION" -n "0" -sbml "/tmp/tmps32wtb44/files/a/1/2/dataset_a1221127-f83b-46bd-9196-d09ff93ffcec.dat" -tab "/tmp/tmps32wtb44/files/d/1/b/dataset_d1b0fdc4-88c5-449f-a81f-a287bcf4d03e.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/134/outputs/galaxy_dataset_d54223c7-785d-4953-8760-0d9e8028bb3c.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 entities processed
      Parsing Bionetwork _a3566be6_db84_4745_9a58_84daf5041166
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "REACTION" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetIdsFromFile (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile -cnew "2" -ci "1"   -o "PATHWAY" -n "0" -sbml "/tmp/tmps32wtb44/files/e/9/e/dataset_e9e763ac-d376-457e-a95a-d44a57e7d2e2.dat" -tab "/tmp/tmps32wtb44/files/0/6/1/dataset_061c77ee-28b7-4be7-868c-4ec01b7d1752.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/137/outputs/galaxy_dataset_647bc7f0-1a0b-4ffc-b63e-36fb5835980a.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 entities processed
      Parsing Bionetwork Xfm1158
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "PATHWAY" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetIdsFromFile (Test #4)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile -cnew "2" -ci "1"   -o "GENE" -n "0" -sbml "/tmp/tmps32wtb44/files/5/a/d/dataset_5adf7a4d-4056-426c-99c4-028d27ccc911.dat" -tab "/tmp/tmps32wtb44/files/3/0/d/dataset_30d8ade9-f72e-41c9-b200-8703ee4ed47b.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/140/outputs/galaxy_dataset_eb9a5169-c53d-483b-b385-48cf577eb068.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 entities processed
      Parsing Bionetwork Xfm1158
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Pathways...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "GENE" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetIdsFromFile (Test #5)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile -cnew "2" -ci "1"   -o "COMPARTMENT" -n "0" -sbml "/tmp/tmps32wtb44/files/1/a/0/dataset_1a07d6ae-ea0f-4d93-a46a-0e51cef7fa59.dat" -tab "/tmp/tmps32wtb44/files/d/9/4/dataset_d94370ce-f0ff-4a78-bc4b-f8a6e9c62ff7.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/143/outputs/galaxy_dataset_354baa3d-5d10-4bac-8b99-8c1697318bcc.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 entities processed
      Parsing Bionetwork Xfm1158
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Pathways...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "COMPARTMENT" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetNamesFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetNamesFromFile -cname "2" -ci "1"   -o "METABOLITE" -n "0" -sbml "/tmp/tmps32wtb44/files/a/3/9/dataset_a396a08a-9ab9-415b-93bf-db89988ff408.dat" -tab "/tmp/tmps32wtb44/files/b/4/6/dataset_b461d0dc-d2b5-4c71-b9e2-198c3b5abbeb.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/146/outputs/galaxy_dataset_2fd8a75e-ba7c-4c97-aee1-dc5f7945348e.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _46539b48_984e_4b75_ad2e_88f9036fd03f
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "METABOLITE" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetNamesFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetNamesFromFile -cname "2" -ci "1"   -o "REACTION" -n "0" -sbml "/tmp/tmps32wtb44/files/e/e/7/dataset_ee70c3cf-c174-40e7-8740-e2dd39b13c88.dat" -tab "/tmp/tmps32wtb44/files/3/d/f/dataset_3df85549-1156-4aa4-935f-b180a909348c.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/149/outputs/galaxy_dataset_f9185213-c9e8-43fc-9119-d39a46dec015.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _e28f7af8_19aa_4835_8a80_4ee350b43196
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "REACTION" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetNamesFromFile (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetNamesFromFile -cname "2" -ci "1"   -o "PATHWAY" -n "0" -sbml "/tmp/tmps32wtb44/files/d/4/1/dataset_d4157e9b-fa9c-4a9b-8245-54b20501f1eb.dat" -tab "/tmp/tmps32wtb44/files/7/3/1/dataset_7319b82e-ac5d-4750-8af4-13f7670e6e3d.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/152/outputs/galaxy_dataset_782343f7-eeeb-42be-a47f-dd8f565b539b.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 attributions
      Parsing Bionetwork Xfm1158
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "PATHWAY" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetNamesFromFile (Test #4)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetNamesFromFile -cname "2" -ci "1"   -o "GENE" -n "0" -sbml "/tmp/tmps32wtb44/files/d/0/6/dataset_d06fea1c-2eab-4160-8bfe-fdd3542fdb88.dat" -tab "/tmp/tmps32wtb44/files/b/4/8/dataset_b487970d-4143-447d-bfbe-7d3544154619.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/155/outputs/galaxy_dataset_d8f97381-61da-42ea-be3d-a39d0fcdddae.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 attributions
      Parsing Bionetwork Xfm1158
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "GENE" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetPathwaysFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetPathwaysFromFile -cp "2" -sep "|" -ci "1"  -n "0" -sbml "/tmp/tmps32wtb44/files/f/a/b/dataset_fabeacab-8c59-4bac-8109-dc70c5058a6d.dat" -tab "/tmp/tmps32wtb44/files/4/f/6/dataset_4f64327a-b89d-4395-a764-7161d42aae2b.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/158/outputs/galaxy_dataset_19410dfb-6f55-43ae-9034-02c33bb73283.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      3 reactions processed
      Parsing Bionetwork _eb2cdefa_ed15_4a31_9ba1_ee07688ff7a2
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colp | ` "2" ` |
       | sep | ` "|" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetPathwaysFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetPathwaysFromFile -cp "2" -sep " + " -ci "1"  -n "0" -sbml "/tmp/tmps32wtb44/files/1/c/5/dataset_1c5196d3-0b59-4c06-981e-fb4721b1b01e.dat" -tab "/tmp/tmps32wtb44/files/b/1/d/dataset_b1d35091-9df2-4368-b315-40a4312996c9.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/161/outputs/galaxy_dataset_76f44762-be97-4fa4-afb4-8f9cf2f1ac06.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      3 reactions processed
      Parsing Bionetwork _8e2d896c_f266_4d17_b5ac_d6c929423b71
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colp | ` "2" ` |
       | sep | ` " + " ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetRefsFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetRefsFromFile -cr "2" -ref "InChi" -ci "1"   -o "METABOLITE" -n "0" -sbml "/tmp/tmps32wtb44/files/c/8/a/dataset_c8a3d978-c926-4ae9-939a-39daa1b35c99.dat" -tab "/tmp/tmps32wtb44/files/d/3/4/dataset_d34b2720-06b9-4c69-951d-457563c5a4ea.dat" -c "#" -out "/tmp/tmps32wtb44/job_working_directory/000/164/outputs/galaxy_dataset_b5f73835-845a-4ba9-9aa5-0ff9a7da6307.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _fc13d2bf_4a28_4364_95b2_709545257cd2
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colRef | ` "2" ` |
       | ref | ` "InChi" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "METABOLITE" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlToMetaboliteTable (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlToMetaboliteTable -s "/tmp/tmps32wtb44/files/1/a/8/dataset_1a832af6-ea5d-499b-ae06-6c8fc29e0ef2.dat" -o "/tmp/tmps32wtb44/job_working_directory/000/166/outputs/galaxy_dataset_e8bdd546-22f1-4460-9529-38b426f9c47b.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ScopeNetwork (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ScopeNetwork -i "/tmp/tmps32wtb44/files/4/1/b/dataset_41bd7f21-43d5-4394-8b9b-b48670545f31.dat" -s "/tmp/tmps32wtb44/files/5/d/9/dataset_5d96d2dc-12f6-4be8-b77a-626bbe2f96dd.dat" -sc "/tmp/tmps32wtb44/files/5/3/7/dataset_53756bdb-3dd2-46ab-a117-a3d03aebeccd.dat"    -o "/tmp/tmps32wtb44/job_working_directory/000/170/outputs/galaxy_dataset_ec69ba3e-7155-4b31-b5fd-95fbc1c81c4b.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmps32wtb44/job_working_directory/000/170/outputs/galaxy_dataset_ec69ba3e-7155-4b31-b5fd-95fbc1c81c4b.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | includeSides | ` false ` |
       | reactionToIgnoreFile | ` None ` |
       | trace | ` false ` |
       | asTable | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SeedsAndTargets (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.SeedsAndTargets -i "/tmp/tmps32wtb44/files/0/d/0/dataset_0d0a3b91-27b4-4b8c-a60c-28576fb2cf9e.dat" -s       -o "/tmp/tmps32wtb44/job_working_directory/000/172/outputs/galaxy_dataset_ab9efb2b-c75e-45aa-9d1f-8306b687d758.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | inputSide | ` None ` |
       | comp | ` "" ` |
       | source | ` true ` |
       | sink | ` false ` |
       | notsource | ` false ` |
       | notsink | ` false ` |
       | keepIsolated | ` false ` |
       | useBorensteinAlg | ` false ` |
       | useInternal | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SeedsAndTargets (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.SeedsAndTargets -i "/tmp/tmps32wtb44/files/8/c/0/dataset_8c0bfa52-5b42-424b-8511-f6d67124c914.dat" -c "e"  -t     -in -o "/tmp/tmps32wtb44/job_working_directory/000/174/outputs/galaxy_dataset_5fdd6d87-03f6-4e97-8aed-b334bd95af6d.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | inputSide | ` None ` |
       | comp | ` "e" ` |
       | source | ` false ` |
       | sink | ` true ` |
       | notsource | ` false ` |
       | notsink | ` false ` |
       | keepIsolated | ` false ` |
       | useBorensteinAlg | ` false ` |
       | useInternal | ` true ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SeedsAndTargets (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.SeedsAndTargets -i "/tmp/tmps32wtb44/files/4/d/5/dataset_4d5c7eb6-d22e-4a6f-b9f9-f8d203a16411.dat" -c "e"  -t    -B  -o "/tmp/tmps32wtb44/job_working_directory/000/176/outputs/galaxy_dataset_94e9acde-95a0-48fc-a93e-3f000f201d87.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | inputSide | ` None ` |
       | comp | ` "e" ` |
       | source | ` false ` |
       | sink | ` true ` |
       | notsource | ` false ` |
       | notsink | ` false ` |
       | keepIsolated | ` false ` |
       | useBorensteinAlg | ` true ` |
       | useInternal | ` false ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SideCompoundsScan (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.SideCompoundsScan -i "/tmp/tmps32wtb44/files/8/8/0/dataset_880da62b-1f91-409f-8371-e10f12b12a05.dat"   -d "400"   -m "no" -o "/tmp/tmps32wtb44/job_working_directory/000/178/outputs/galaxy_dataset_fb05a4f8-e635-4c9b-beff-edc430e6ab0c.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      /tmp/tmps32wtb44/files/8/8/0/dataset_880da62b-1f91-409f-8371-e10f12b12a05.dat
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      Scaning...
      done
      found 6 side compound among 1107 compounds
      /tmp/tmps32wtb44/job_working_directory/000/178/outputs/galaxy_dataset_fb05a4f8-e635-4c9b-beff-edc430e6ab0c.dat

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideOnly | ` false ` |
       | noReportValue | ` false ` |
       | degree | ` "400" ` |
       | degreePrecentile | ` "nan" ` |
       | flagInorganic | ` false ` |
       | flagNoFormula | ` false ` |
       | parallelEdge | ` "nan" ` |
       | mergingStrat | ` "no" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SideCompoundsScan (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.SideCompoundsScan -i "/tmp/tmps32wtb44/files/1/e/0/dataset_1e057cdc-a897-4cbb-8f7e-2eb52f87a55e.dat"  -id -d "400"   -m "no" -o "/tmp/tmps32wtb44/job_working_directory/000/180/outputs/galaxy_dataset_e636fcc9-2f54-41ea-b098-f5ec43faceb7.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      /tmp/tmps32wtb44/files/1/e/0/dataset_1e057cdc-a897-4cbb-8f7e-2eb52f87a55e.dat
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      Scaning...
      done
      found 6 side compound among 1107 compounds
      /tmp/tmps32wtb44/job_working_directory/000/180/outputs/galaxy_dataset_e636fcc9-2f54-41ea-b098-f5ec43faceb7.dat

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideOnly | ` false ` |
       | noReportValue | ` true ` |
       | degree | ` "400" ` |
       | degreePrecentile | ` "nan" ` |
       | flagInorganic | ` false ` |
       | flagNoFormula | ` false ` |
       | parallelEdge | ` "nan" ` |
       | mergingStrat | ` "no" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Tab2Sbml (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Tab2Sbml -ci "1" -cf "2"   -e "_b" -i "-->" -r "<==>" -in "/tmp/tmps32wtb44/files/3/1/4/dataset_31467a76-c896-406e-8fe3-e889c2177606.dat" -id "NA"  -dcpt "c" -n "0" -sbml "/tmp/tmps32wtb44/job_working_directory/000/182/outputs/galaxy_dataset_1875384c-1994-42f5-b8bf-8707c2a41068.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      The input file looks good and contains 7 reactions
      7 reactions, 8 metabolites and 2 compartments created
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Parsing Bionetwork _6cfcc10b_83c2_4c53_9867_fefd4b99a6ea
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colid | ` "1" ` |
       | colformula | ` "2" ` |
       | rp | ` false ` |
       | mp | ` false ` |
       | e | ` "_b" ` |
       | i | ` "-->" ` |
       | r | ` "<==>" ` |
       | id | ` ab55e86b5c97645d ` |
       | createCompartment | ` false ` |
       | defaultCompartment | ` "c" ` |
       | nSkip | ` "0" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "tabular" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Tab2Sbml (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Tab2Sbml -ci "2" -cf "3"   -e "_b" -i "-->" -r "<==>" -in "/tmp/tmps32wtb44/files/0/1/5/dataset_015eb908-d7fc-4196-b3cf-5bece43a6a96.dat" -id "NA"  -dcpt "c" -n "0" -sbml "/tmp/tmps32wtb44/job_working_directory/000/184/outputs/galaxy_dataset_662bb4ac-a622-4677-bc03-8d63041f42ab.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      The input file looks good and contains 7 reactions
      7 reactions, 8 metabolites and 2 compartments created
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Parsing Bionetwork _c6e71f47_2cbb_4d16_a511_3e3f338f042d
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colid | ` "2" ` |
       | colformula | ` "3" ` |
       | rp | ` false ` |
       | mp | ` false ` |
       | e | ` "_b" ` |
       | i | ` "-->" ` |
       | r | ` "<==>" ` |
       | id | ` ab55e86b5c97645d ` |
       | createCompartment | ` false ` |
       | defaultCompartment | ` "c" ` |
       | nSkip | ` "0" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "tabular" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Tab2Sbml (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Tab2Sbml -ci "1" -cf "2"   -e "_b" -i "->" -r "=" -in "/tmp/tmps32wtb44/files/0/e/e/dataset_0eeae986-358f-4f40-9942-1fec7377b8a3.dat" -id "NA"  -dcpt "c" -n "0" -sbml "/tmp/tmps32wtb44/job_working_directory/000/186/outputs/galaxy_dataset_f26ab7b8-9d93-4228-8e3e-3a1bddde2fdf.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      The input file looks good and contains 7 reactions
      7 reactions, 8 metabolites and 2 compartments created
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Parsing Bionetwork _6ea613fb_3bde_4800_9d41_507fe156f0dc
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colid | ` "1" ` |
       | colformula | ` "2" ` |
       | rp | ` false ` |
       | mp | ` false ` |
       | e | ` "_b" ` |
       | i | ` "->" ` |
       | r | ` "=" ` |
       | id | ` ab55e86b5c97645d ` |
       | createCompartment | ` false ` |
       | defaultCompartment | ` "c" ` |
       | nSkip | ` "0" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "tabular" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Tab2Sbml (Test #4)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Tab2Sbml -ci "1" -cf "2" -rp -mp -e "_e" -i "-->" -r "<==>" -in "/tmp/tmps32wtb44/files/f/c/4/dataset_fc408156-9aab-41d3-aed4-01f83977ad9f.dat" -id "NA" -cpt -dcpt "c" -n "0" -sbml "/tmp/tmps32wtb44/job_working_directory/000/188/outputs/galaxy_dataset_f1982ea5-5ba6-43cc-92cf-64eb553f80ba.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      The input file looks good and contains 7 reactions
      7 reactions, 8 metabolites and 2 compartments created
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Parsing Bionetwork _8a188b65_2b60_4a84_bed3_d2bf54e4f268
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colid | ` "1" ` |
       | colformula | ` "2" ` |
       | rp | ` true ` |
       | mp | ` true ` |
       | e | ` "_e" ` |
       | i | ` "-->" ` |
       | r | ` "<==>" ` |
       | id | ` ab55e86b5c97645d ` |
       | createCompartment | ` true ` |
       | defaultCompartment | ` "c" ` |
       | nSkip | ` "0" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "tabular" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Tab2Sbml (Test #5)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Tab2Sbml -ci "1" -cf "2"   -e "_b" -i "-->" -r "<==>" -in "/tmp/tmps32wtb44/files/0/c/d/dataset_0cdb45dc-15e3-4c6d-82ac-cc972a9055bb.dat" -id "myModel"  -dcpt "c" -n "0" -sbml "/tmp/tmps32wtb44/job_working_directory/000/190/outputs/galaxy_dataset_89a218f7-2046-4eb4-b8de-a193b7bb9f08.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      The input file looks good and contains 7 reactions
      7 reactions, 8 metabolites and 2 compartments created
      ERROR StatusLogger Reconfiguration failed: No configuration found for '55054057' at 'null' in 'null'
      Parsing Bionetwork myModel
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colid | ` "1" ` |
       | colformula | ` "2" ` |
       | rp | ` false ` |
       | mp | ` false ` |
       | e | ` "_b" ` |
       | i | ` "-->" ` |
       | r | ` "<==>" ` |
       | id | ` 52e0f86e855b281b9d529278cad1ae96 ` |
       | createCompartment | ` false ` |
       | defaultCompartment | ` "c" ` |
       | nSkip | ` "0" ` |
       | chromInfo | ` "/tmp/tmps32wtb44/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "tabular" ` |



  </div></details>


</details>
')); + target.innerHTML = md.render(atob('## Test Summary

<div class="progress">
  <div class="progress-bar progress-bar-success" style="width: 100.0%" aria-valuenow="73" aria-valuemin="0" aria-valuemax="73" data-toggle="tooltip" title="73 Passed">
  </div>
  <div class="progress-bar progress-bar-warning" style="width: 0.0%" aria-valuenow="0" aria-valuemin="0" aria-valuemax="73" data-toggle="tooltip" title="0 Skipped">
  </div>
  <div class="progress-bar progress-bar-danger" style="width: 0.0%" aria-valuenow="0" aria-valuemin="0" aria-valuemax="73" title="0 Failed or Errored">
  </div>
</div>

| Test State | Count |
| ---------- | ----- |
| Total      | 73 |
| Passed     | 73 |
| Error      | 0 |
| Failure    | 0 |
| Skipped    | 0 |


<details><summary>Passed Tests</summary>

* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmpbnlji2s3/files/f/e/d/dataset_fed64872-b126-432a-9ee8-8405a4c5aedb.dat" -g "/tmp/tmpbnlji2s3/files/8/b/2/dataset_8b262cd3-bf5c-4440-91ec-983ba0f9413a.dat"          -o "/tmp/tmpbnlji2s3/job_working_directory/000/3/outputs/galaxy_dataset_faeb866c-0959-4809-b17d-01eda6f97c84.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Exporting.../tmp/tmpbnlji2s3/job_working_directory/000/3/outputs/galaxy_dataset_faeb866c-0959-4809-b17d-01eda6f97c84.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmpbnlji2s3/files/4/5/8/dataset_458da5c6-8cac-4d78-9365-6e6b6eb2095a.dat" -g "/tmp/tmpbnlji2s3/files/1/7/2/dataset_1721804a-e0e4-4204-95cf-264344fd1bed.dat" -ks         -o "/tmp/tmpbnlji2s3/job_working_directory/000/6/outputs/galaxy_dataset_fde532b1-3a61-4253-b795-62bc7486069b.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Exporting.../tmp/tmpbnlji2s3/job_working_directory/000/6/outputs/galaxy_dataset_fde532b1-3a61-4253-b795-62bc7486069b.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` true ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmpbnlji2s3/files/3/0/f/dataset_30ff4aad-0070-4fbd-9c0e-3e2ae4d85108.dat" -g "/tmp/tmpbnlji2s3/files/7/3/b/dataset_73bd6602-d979-4749-9830-3620c8a7fa85.dat"  -mc        -o "/tmp/tmpbnlji2s3/job_working_directory/000/9/outputs/galaxy_dataset_4939fa37-8e44-4b8b-9bcf-5e452142f720.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Merging compartments... Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
       Done.
      Exporting.../tmp/tmpbnlji2s3/job_working_directory/000/9/outputs/galaxy_dataset_4939fa37-8e44-4b8b-9bcf-5e452142f720.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` true ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #4)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmpbnlji2s3/files/2/5/1/dataset_2517e662-8d09-4781-ad39-351b101ad3fe.dat" -g "/tmp/tmpbnlji2s3/files/2/d/6/dataset_2d672d67-e535-4bfb-9ced-edf320acd020.dat"   -me       -o "/tmp/tmpbnlji2s3/job_working_directory/000/12/outputs/galaxy_dataset_ea349a90-f525-479b-9ac9-a86b7d640760.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Merging edges... Done.
      Exporting.../tmp/tmpbnlji2s3/job_working_directory/000/12/outputs/galaxy_dataset_ea349a90-f525-479b-9ac9-a86b7d640760.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` true ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #5)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmpbnlji2s3/files/4/9/4/dataset_494f16ad-9f83-4b4f-afe0-a7dffba84f46.dat" -g "/tmp/tmpbnlji2s3/files/f/1/8/dataset_f18ad06d-7cd6-402b-801d-7ba993479335.dat"    -ri      -o "/tmp/tmpbnlji2s3/job_working_directory/000/15/outputs/galaxy_dataset_8c77b1eb-ea9a-434e-b509-ebcc4e17f788.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph
      16 isolated nodes removed 

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Remove isolated nodes...
      	removing H2O
      	removing Pi
      	removing galactose
      	removing CO2
      	removing fructose
      	removing H+
      	removing H2O
      	removing CO2
      	removing H2O
      	removing H+
      	removing H2O
      	removing 3-keto-beta-D-galactose
      	removing fructose-3-phosphate
      	removing H+
      	removing PPi
      	removing H+
       Done.
      Exporting.../tmp/tmpbnlji2s3/job_working_directory/000/15/outputs/galaxy_dataset_8c77b1eb-ea9a-434e-b509-ebcc4e17f788.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` true ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #6)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmpbnlji2s3/files/6/a/b/dataset_6ab2a36f-16df-411d-993a-a69ea8e8971c.dat" -g "/tmp/tmpbnlji2s3/files/c/d/9/dataset_cd9a15d1-2690-4921-a8b7-a47ede78cd06.dat"     -un     -o "/tmp/tmpbnlji2s3/job_working_directory/000/18/outputs/galaxy_dataset_55f0315e-1737-427d-928a-de9b7bef0dc1.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Create Undirected... Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Exporting.../tmp/tmpbnlji2s3/job_working_directory/000/18/outputs/galaxy_dataset_55f0315e-1737-427d-928a-de9b7bef0dc1.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` true ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #7)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmpbnlji2s3/files/e/0/3/dataset_e037dd7e-b647-41b4-a4a8-f6042fea1ba1.dat" -g "/tmp/tmpbnlji2s3/files/e/6/8/dataset_e68c8b5f-c9b8-46fd-a7c6-3f1f44416f6e.dat"       -am   -o "/tmp/tmpbnlji2s3/job_working_directory/000/21/outputs/galaxy_dataset_696b817b-fb79-426a-8837-ab5602fa6587.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '46fbb2c1' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      205 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Exporting... Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` true ` |
       | main | ` false ` |
       | fromIndexes | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CarbonSkeletonNet (Test #8)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CarbonSkeletonNet -s "/tmp/tmpbnlji2s3/files/3/0/f/dataset_30fbd7b5-0f82-49c3-ad32-22c7125212bf.dat" -g "/tmp/tmpbnlji2s3/files/8/d/9/dataset_8d9160c7-cab3-4bc2-88c8-975d9fbe17fe.dat"         -i -o "/tmp/tmpbnlji2s3/job_working_directory/000/24/outputs/galaxy_dataset_656a75a4-eee4-4d72-9f26-cbd1b8266c26.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      0 edges in file not found in the graph
      206 weights set among 502 edges in graph

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
      Processing atom mappings...Done.
      Skip compounds with less than two carbons detected...
      	disconnecting CO2
      	disconnecting CO2
       Done.
      Exporting.../tmp/tmpbnlji2s3/job_working_directory/000/24/outputs/galaxy_dataset_656a75a4-eee4-4d72-9f26-cbd1b8266c26.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | keepSingleCarbon | ` false ` |
       | mergeComp | ` false ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | main | ` false ` |
       | fromIndexes | ` true ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ChokePoint (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ChokePoint -i "/tmp/tmpbnlji2s3/files/4/1/3/dataset_413f2156-68df-4c20-9b10-2d291dd4247b.dat" -o "/tmp/tmpbnlji2s3/job_working_directory/000/26/outputs/galaxy_dataset_c3bb9c3d-d304-4804-bafa-c56ef8c6fc73.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      Computing choke points...
      Export results...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CompoundNet (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CompoundNet -s "/tmp/tmpbnlji2s3/files/0/a/2/dataset_0a2501a4-3a7b-4a09-9fec-d3e7306e3fef.dat" -sc "/tmp/tmpbnlji2s3/files/c/d/4/dataset_cd413c6e-05a0-46a7-ad56-f1ffa2732cd0.dat" -mc "no"       -o "/tmp/tmpbnlji2s3/job_working_directory/000/29/outputs/galaxy_dataset_512d133f-1065-460e-bdd6-30699cc6cffc.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model Xfm1158
      removing side compounds...
      6 compounds removed.

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
       Done.
      Exporting.../tmp/tmpbnlji2s3/job_working_directory/000/29/outputs/galaxy_dataset_512d133f-1065-460e-bdd6-30699cc6cffc.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | mergingStrat | ` "no" ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` false ` |
       | degree | ` false ` |
       | weightFile | ` None ` |
       | undirected | ` false ` |
       | computeWeight | ` false ` |
       | asMatrix | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_CompoundNet (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.CompoundNet -s "/tmp/tmpbnlji2s3/files/e/f/2/dataset_ef2ac3b2-c42e-494b-9f97-41b5d15520cc.dat" -sc "/tmp/tmpbnlji2s3/files/4/6/0/dataset_4607fcfe-a781-4992-b7f3-0beee19a9af9.dat" -mc "by_id"  -ri -dw -un -tp  -o "/tmp/tmpbnlji2s3/job_working_directory/000/32/outputs/galaxy_dataset_6ee2a860-f704-4c5c-8087-cf1221552455.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model Xfm1158
      removing side compounds...
      6 compounds removed.
      Setting edge weights (target degree)...
      12 isolated nodes removed 

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.
      Buildinig Network... Done.
       Done.
      Create Undirected... Done.
       Done.
      Merging compartments... Done.
      Remove isolated nodes...
      	removing Glycerophosphoglycerol
      	removing sn_Glycero_3_phospho_1_inositol
      	removing sn_Glycero_3_phosphocholine
      	removing M_s_c
      	removing methanesulfonate
      	removing P1_P4_Bis_5__adenosyl__tetraphosphate
      	removing M_cys_D_c
      	removing M_met_D_c
      	removing P1_P5_Bis_5__adenosyl__pentaphosphate
      	removing sn_Glycero_3_phosphoethanolamine
      	removing Glycerophosphoserine
      	removing D_Glyceraldehyde
       Done.
      Compute transition matrix... Done.
      Exporting.../tmp/tmpbnlji2s3/job_working_directory/000/32/outputs/galaxy_dataset_6ee2a860-f704-4c5c-8087-cf1221552455.dat created.
       Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | mergingStrat | ` "by_id" ` |
       | mergeEdges | ` false ` |
       | removeIsolated | ` true ` |
       | degree | ` true ` |
       | weightFile | ` None ` |
       | undirected | ` true ` |
       | computeWeight | ` true ` |
       | asMatrix | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_DecomposeSBML (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.DecomposeSBML -i "/tmp/tmpbnlji2s3/files/3/c/f/dataset_3cf86aac-eba9-415b-ba44-7e5b37693575.dat"       -o "/tmp/tmpbnlji2s3/job_working_directory/000/34/outputs/galaxy_dataset_629826ea-598e-4408-8168-9987a1a68a83.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model HumanGEM

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | printMetabolites | ` false ` |
       | printReactions | ` false ` |
       | printCompartments | ` false ` |
       | printPathways | ` false ` |
       | printGenes | ` false ` |
       | noTypeCol | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_DecomposeSBML (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.DecomposeSBML -i "/tmp/tmpbnlji2s3/files/0/9/9/dataset_099fc135-c23d-4886-959b-c2d61051fa00.dat" -m -r -c  -g -nt -o "/tmp/tmpbnlji2s3/job_working_directory/000/36/outputs/galaxy_dataset_ffc40b29-2a75-44f4-8dbb-d257b05dc5b7.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model HumanGEM

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | printMetabolites | ` true ` |
       | printReactions | ` true ` |
       | printCompartments | ` true ` |
       | printPathways | ` false ` |
       | printGenes | ` true ` |
       | noTypeCol | ` true ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_DistanceMatrix (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.DistanceMatrix -i "/tmp/tmpbnlji2s3/files/a/c/e/dataset_acefffb5-2120-4c24-a1db-c9dc3f581b2c.dat"   -o "/tmp/tmpbnlji2s3/job_working_directory/000/38/outputs/galaxy_dataset_579f0012-0e2f-4117-8e4e-9414786cfb3d.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | seedFile | ` None ` |
       | degree | ` false ` |
       | weightFile | ` None ` |
       | undirected | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_DistanceMatrix (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.DistanceMatrix -i "/tmp/tmpbnlji2s3/files/e/d/b/dataset_edb75c6a-f3b7-4ddb-998d-ed22feb4edeb.dat" -sc "/tmp/tmpbnlji2s3/files/2/0/c/dataset_20cfe801-b497-4677-a53f-45a232bc1cfd.dat" -dw -u -o "/tmp/tmpbnlji2s3/job_working_directory/000/41/outputs/galaxy_dataset_79314acb-ce7f-4df1-9879-9b61061ddf76.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      removing side compounds...
      1 side compounds ignored during graph build.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | seedFile | ` None ` |
       | degree | ` true ` |
       | weightFile | ` None ` |
       | undirected | ` true ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractPathways (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.ExtractPathways -i "/tmp/tmpbnlji2s3/files/2/9/4/dataset_294cd667-ec2d-4604-9e45-d7eab5580d90.dat" -p "Citric_Acid_Cycle+Folate_Metabolism+toto" -o "/tmp/tmpbnlji2s3/job_working_directory/000/43/outputs/galaxy_dataset_c012eaee-da84-4ae0-8553-b74ae67b7386.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Parsing Bionetwork Xfm1158
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Annotations...
      Generating Model Notes...
      network exported.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Number of reactions in original network: 1158
      Number of species in original network: 1107
      Number of genes in original network: 572
      Number of reactions in pathway Citric_Acid_Cycle (Citric_Acid_Cycle): 11
      Number of species in pathway Citric_Acid_Cycle (Citric_Acid_Cycle): 26
      Number of genes in pathway Citric_Acid_Cycle (Citric_Acid_Cycle): 18
      Number of reactions in pathway Folate_Metabolism (Folate_Metabolism): 6
      Number of species in pathway Folate_Metabolism (Folate_Metabolism): 16
      Number of genes in pathway Folate_Metabolism (Folate_Metabolism): 8
      Error: Pathway toto not found in network, please check sbml file.
      Number of reactions in network: 17
      Number of species in network: 35
      Number of genes in network: 25

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | pathwayId | ` "Citric_Acid_Cycle+Folate_Metabolism+toto" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSbmlAnnot (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.ExtractSbmlAnnot -i "/tmp/tmpbnlji2s3/files/f/f/2/dataset_ff258354-71d7-4486-8819-19cb4bff1359.dat" -export "METABOLITE" -db "metanetx.chemical"   -o "/tmp/tmpbnlji2s3/job_working_directory/000/45/outputs/galaxy_dataset_2bc20cbb-0c3c-4f44-8c4b-66a1916ebac9.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model HumanGEM

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      annotations found for 110/111 metabolites

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | export | ` "METABOLITE" ` |
       | db | ` "metanetx.chemical" ` |
       | uniq | ` false ` |
       | skip | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSbmlAnnot (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.ExtractSbmlAnnot -i "/tmp/tmpbnlji2s3/files/2/9/2/dataset_29225f1f-6dc3-4cf8-bf26-d0956f7a21df.dat" -export "METABOLITE" -db "metanetx.chemical"  -skip -o "/tmp/tmpbnlji2s3/job_working_directory/000/47/outputs/galaxy_dataset_ce2b3c13-a7be-43a6-93a4-9b1d8922f68b.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '46fbb2c1' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model HumanGEM

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      annotations found for 110/111 metabolites

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | export | ` "METABOLITE" ` |
       | db | ` "metanetx.chemical" ` |
       | uniq | ` false ` |
       | skip | ` true ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSbmlAnnot (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.ExtractSbmlAnnot -i "/tmp/tmpbnlji2s3/files/8/5/f/dataset_85fd8d4e-056b-4644-80d0-0c7584a78856.dat" -export "METABOLITE" -db "metanetx.chemical" -uniq -skip -o "/tmp/tmpbnlji2s3/job_working_directory/000/49/outputs/galaxy_dataset_e659aff8-9f54-422e-95b7-8ac37bc6a1ed.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model HumanGEM

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      annotations found for 110/111 metabolites

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | export | ` "METABOLITE" ` |
       | db | ` "metanetx.chemical" ` |
       | uniq | ` true ` |
       | skip | ` true ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSubBipNetwork (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ExtractSubBipNetwork -i "/tmp/tmpbnlji2s3/files/9/f/8/dataset_9f84ea7b-63a7-4a0e-8ed0-627fa147e164.dat" -s "/tmp/tmpbnlji2s3/files/a/7/3/dataset_a737f0c7-2ef1-4484-a900-4fa1585f2be8.dat" -t "/tmp/tmpbnlji2s3/files/b/1/8/dataset_b18250f9-2409-4e3f-8708-42b2b6c68df6.dat"   -sc "/tmp/tmpbnlji2s3/files/4/f/f/dataset_4ff6c59c-f9b3-4efd-b404-08c2dad753cb.dat" -k "1"  -o "/tmp/tmpbnlji2s3/job_working_directory/000/54/outputs/galaxy_dataset_f742b002-0309-486e-b14c-455a885fa125.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      importing side compounds...
      extracting sources and targets

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmpbnlji2s3/job_working_directory/000/54/outputs/galaxy_dataset_f742b002-0309-486e-b14c-455a885fa125.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | undirected | ` false ` |
       | asTable | ` false ` |
       | blkdReactionFile | ` None ` |
       | weightFile | ` None ` |
       | k | ` "1" ` |
       | st | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSubNetwork (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ExtractSubNetwork -i "/tmp/tmpbnlji2s3/files/c/e/8/dataset_ce836f6f-577f-4517-a3ed-39e545669706.dat" -s "/tmp/tmpbnlji2s3/files/3/3/3/dataset_3330f228-69c5-4a09-9cea-355018bd9302.dat" -t "/tmp/tmpbnlji2s3/files/d/c/b/dataset_dcb9a194-4c75-457e-9f33-14587c3b8c57.dat"     -k "1"  -o "/tmp/tmpbnlji2s3/job_working_directory/000/58/outputs/galaxy_dataset_513b16f6-161c-49fb-b220-e6fff09241d8.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '46fbb2c1' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      extracting sources and targets

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmpbnlji2s3/job_working_directory/000/58/outputs/galaxy_dataset_513b16f6-161c-49fb-b220-e6fff09241d8.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | degree | ` false ` |
       | weightFile | ` None ` |
       | chemicalSim | ` false ` |
       | undirected | ` false ` |
       | asTable | ` false ` |
       | k | ` "1" ` |
       | st | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ExtractSubReactionNetwork (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ExtractSubReactionNetwork -i "/tmp/tmpbnlji2s3/files/8/4/6/dataset_846cd4b8-102a-41b5-b5c0-1d71958b6cf8.dat" -s "/tmp/tmpbnlji2s3/files/a/2/0/dataset_a20aa30e-42c0-4f1c-a153-6a3b64ad13fa.dat"   -t "/tmp/tmpbnlji2s3/files/5/4/b/dataset_54b13200-79c8-42ee-a794-219fab3d26bd.dat" -sc "/tmp/tmpbnlji2s3/files/8/6/8/dataset_868a6837-5be4-4df9-9369-66cdb9b2346f.dat" -k "1"  -o "/tmp/tmpbnlji2s3/job_working_directory/000/63/outputs/galaxy_dataset_ad3c8ada-6bb7-4a20-9da2-7f77b72e4429.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      importing side compounds...
      0 side compounds ignored during graph build.
      extracting sources and targets

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmpbnlji2s3/job_working_directory/000/63/outputs/galaxy_dataset_ad3c8ada-6bb7-4a20-9da2-7f77b72e4429.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | undirected | ` false ` |
       | asTable | ` false ` |
       | weightFile | ` None ` |
       | k | ` "1" ` |
       | st | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_FbcToNotes (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.FbcToNotes -i "/tmp/tmpbnlji2s3/files/7/e/0/dataset_7e098e3a-441a-4f07-9cc1-b4f4d512c261.dat" -o "/tmp/tmpbnlji2s3/job_working_directory/000/65/outputs/galaxy_dataset_81551103-cd23-4ec8-a895-894b485b6173.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model iML1515
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model iML1515
      Parsing Bionetwork iML1515
      Generating Pathways...
      Generating Model Annotations...
      Bad property in annotations: hasProperty, set to HAS_PROPERTY
      Bad property in annotations: hasProperty, set to HAS_PROPERTY
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_GetGenesFromReactions (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.GetGenesFromReactions -i "/tmp/tmpbnlji2s3/files/6/2/6/dataset_626af3db-5646-4643-87bc-c1c2d6a43781.dat" -r "/tmp/tmpbnlji2s3/files/9/5/2/dataset_952076d5-be39-4c0e-a467-4d98b1117d37.dat" -sep "	"  -col "1" -o "/tmp/tmpbnlji2s3/job_working_directory/000/68/outputs/galaxy_dataset_09cfbe77-8fa6-42cc-b0e0-caab6b4e1655.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '46fbb2c1' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 reactions mapped
      0 reactions not found in model

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sep | ` "\t" ` |
       | hasHeader | ` false ` |
       | i | ` "1" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_GetModelProteome (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh bigg.GetModelProteome -m "e_coli_core" -o "/tmp/tmpbnlji2s3/job_working_directory/000/69/outputs/galaxy_dataset_a2785536-5481-4a15-aa5a-55bc1d613a38.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | modelId | ` "e_coli_core" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "data" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_GetReactantsFromReactions (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.GetReactantsFromReactions -i "/tmp/tmpbnlji2s3/files/4/4/c/dataset_44c11d26-0dcb-4bba-9649-7dd9fad682e7.dat" -r "/tmp/tmpbnlji2s3/files/4/0/2/dataset_40299aac-297c-47fc-b045-d44cf04dd647.dat" -sep "	"  -col "1"   -o "/tmp/tmpbnlji2s3/job_working_directory/000/72/outputs/galaxy_dataset_ea34aa8a-d900-4b93-9f59-624a4d4634e3.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 reactions mapped
      0 reactions not found in model

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sep | ` "\t" ` |
       | hasHeader | ` false ` |
       | i | ` "1" ` |
       | printSubstrates | ` false ` |
       | printProducts | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_GetReactantsFromReactions (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.GetReactantsFromReactions -i "/tmp/tmpbnlji2s3/files/9/5/3/dataset_953d8073-1dd6-4ac1-9465-219f7a4f0b99.dat" -r "/tmp/tmpbnlji2s3/files/9/c/c/dataset_9cc9b007-d433-4acf-b33c-50c6d166dbc6.dat" -sep "	"  -col "1" -s  -o "/tmp/tmpbnlji2s3/job_working_directory/000/75/outputs/galaxy_dataset_26b692c5-c093-4021-b1eb-beeeee088d48.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 reactions mapped
      0 reactions not found in model

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sep | ` "\t" ` |
       | hasHeader | ` false ` |
       | i | ` "1" ` |
       | printSubstrates | ` true ` |
       | printProducts | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_GetReactantsFromReactions (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.GetReactantsFromReactions -i "/tmp/tmpbnlji2s3/files/b/4/3/dataset_b438b97f-b7e2-4694-a4f1-abc30cabd2c2.dat" -r "/tmp/tmpbnlji2s3/files/9/4/4/dataset_944d5912-dc58-4bc2-8d95-96309752996f.dat" -sep "	"  -col "1"  -p -o "/tmp/tmpbnlji2s3/job_working_directory/000/78/outputs/galaxy_dataset_0580b0ff-fea3-4ff0-818c-6cf5aefb84af.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 reactions mapped
      0 reactions not found in model

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sep | ` "\t" ` |
       | hasHeader | ` false ` |
       | i | ` "1" ` |
       | printSubstrates | ` false ` |
       | printProducts | ` true ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_LoadPoint (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.LoadPoint -i "/tmp/tmpbnlji2s3/files/0/0/e/dataset_00ed52e4-baf8-40d8-910d-633f77217e5b.dat" -k "1" -o "/tmp/tmpbnlji2s3/job_working_directory/000/80/outputs/galaxy_dataset_77347000-3f1d-4f04-ba91-003bdc9e3820.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      Creating network...
      Computing load points...
      Export results...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | k | ` "1" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_MetaboRank (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.MetaboRank -i "/tmp/tmpbnlji2s3/files/c/0/4/dataset_c04c454e-4591-4542-884f-a1a965377906.dat" -s "/tmp/tmpbnlji2s3/files/d/a/5/dataset_da59b96b-69b5-449b-8adf-c0968d05a798.dat" -sc "/tmp/tmpbnlji2s3/files/2/6/d/dataset_26d959a8-d859-4a7f-bafa-de7d5b560e69.dat" -max "15000" -t "0.001" -d "0.85" -o "/tmp/tmpbnlji2s3/job_working_directory/000/84/outputs/galaxy_dataset_dc3359fb-0a4e-4151-b1a6-55348e04a805.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      model imported.
      compound graph created.
      removing side compounds...
      6 compounds removed.
      2 isolated nodes removed 
      weights computed.
      reverse graph created.
      transition probabilities computed
      transition probabilities computed (reverse graph)
      seeds file imported
      3 seeds
      global pageRank computed
      global cheiRank computed
      pageRank computed
      cheiRank computed
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | edgeWeightsFilePaths | ` None ` |
       | maxNbOfIter | ` "15000" ` |
       | tolerance | ` "0.001" ` |
       | dampingFactor | ` "0.85" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_NetworkSummary (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.NetworkSummary -i "/tmp/tmpbnlji2s3/files/d/1/1/dataset_d1150ad0-c657-431b-9cfd-5e4d20e5a606.dat"   -o "/tmp/tmpbnlji2s3/job_working_directory/000/86/outputs/galaxy_dataset_e7f312c6-c8db-4491-9aa6-a352d141e350.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      Creating network...
      perform basic analysis...
      extract connected component...
      Compute density...
      Compute local clustering coefficients...
      Compute degree statistics...
      Compute distances...
      Compute distances statistics...
      Compute centrality...
      	Closeness done.
      Done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | skipdist | ` false ` |
       | directed | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_PrecursorNetwork (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.PrecursorNetwork -i "/tmp/tmpbnlji2s3/files/9/a/3/dataset_9a3db22c-9e50-47d8-a53b-1a089f58c1d3.dat" -t "/tmp/tmpbnlji2s3/files/4/5/f/dataset_45f0e031-f187-4bf7-9237-0222be931818.dat"  -o "/tmp/tmpbnlji2s3/job_working_directory/000/89/outputs/galaxy_dataset_a91aa171-6eb3-47d5-a1ab-29b0dc2e09de.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmpbnlji2s3/job_working_directory/000/89/outputs/galaxy_dataset_a91aa171-6eb3-47d5-a1ab-29b0dc2e09de.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideCompoundFile | ` None ` |
       | reactionToIgnoreFile | ` None ` |
       | asTable | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SBMLwizard (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.SBMLwizard -s "/tmp/tmpbnlji2s3/files/f/2/5/dataset_f25109b8-0978-483f-b017-f38c6957112f.dat" -ric -r0 -mc "by_id" -rdr -rEX "s" -o "/tmp/tmpbnlji2s3/job_working_directory/000/91/outputs/galaxy_dataset_f442a578-9cf7-487a-ab4a-95e4c1a5e1b2.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model HumanGEM
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model HumanGEM
      Parsing Bionetwork _05d40c73_8aba_413f_9dd8_779a0b5fb2ae
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.


      	compartments:	5
      	metabolites:	111
      	reactions:	75
      	enzymes:	85
      	genes:	86
      	protein:	86
      	pathway:	3


      removing reaction with closed flux bound...
      0 "closed" reactions removed from network.
      removing external compartment...
      13 external species removed from network.
      removing isolated compounds...
      0 isolated compounds removed from network.
      Merging compartments... Done.
      removing duplicated reactions...
      1 duplicated reactions removed from network.


      	compartments:	1
      	metabolites:	49
      	reactions:	34
      	enzymes:	85
      	genes:	86
      	protein:	86
      	pathway:	3


      Exporting... Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | inputSide | ` None ` |
       | removeIsolated | ` true ` |
       | inputReactions | ` None ` |
       | removeNoFlux | ` true ` |
       | mergingStrat | ` "by_id" ` |
       | removeDuplicated | ` true ` |
       | exchangeCompToRemove | ` "s" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SBMLwizard (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.SBMLwizard -s "/tmp/tmpbnlji2s3/files/f/0/d/dataset_f0d5d384-dc28-492a-97ff-00b3f6cb4088.dat" -rc "/tmp/tmpbnlji2s3/files/7/8/0/dataset_78077cfd-6ba9-42da-9da9-d5584b95d1ae.dat" -ric -rr "/tmp/tmpbnlji2s3/files/2/9/3/dataset_293a5b90-31e3-4c03-aca4-1ade957dfcbf.dat" -r0 -mc "no" -rdr -o "/tmp/tmpbnlji2s3/job_working_directory/000/95/outputs/galaxy_dataset_d705672f-a489-4561-ab7c-a2f83d14a238.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '46fbb2c1' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model Xfm1158
      Parsing Bionetwork Xfm1158
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      Reading SBML... Done.


      	compartments:	3
      	metabolites:	1107
      	reactions:	1158
      	enzymes:	514
      	genes:	572
      	protein:	572
      	pathway:	48


      removing side compounds...
      6 side compounds removed from network.
      removing side reaction...
      2 irrelevant reactions removed from network.
      removing reaction with closed flux bound...
      0 "closed" reactions removed from network.
      removing isolated compounds...
      0 isolated compounds removed from network.
      removing duplicated reactions...
      0 duplicated reactions removed from network.


      	compartments:	3
      	metabolites:	1101
      	reactions:	1152
      	enzymes:	514
      	genes:	572
      	protein:	572
      	pathway:	48


      Exporting... Done.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | removeIsolated | ` true ` |
       | removeNoFlux | ` true ` |
       | mergingStrat | ` "no" ` |
       | removeDuplicated | ` true ` |
       | exchangeCompToRemove | ` "" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Sbml2Graph (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Sbml2Graph -i "/tmp/tmpbnlji2s3/files/f/8/e/dataset_f8ef9e1a-c5a0-4dc3-bf00-3363082b7fae.dat"  -c   -gml -o "/tmp/tmpbnlji2s3/job_working_directory/000/97/outputs/galaxy_dataset_442aa2c2-433f-4224-a83f-6fdeab8e88cb.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmpbnlji2s3/job_working_directory/000/97/outputs/galaxy_dataset_442aa2c2-433f-4224-a83f-6fdeab8e88cb.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | bipartite | ` false ` |
       | compound | ` true ` |
       | reaction | ` false ` |
       | tab | ` false ` |
       | gml | ` true ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Sbml2Graph (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Sbml2Graph -i "/tmp/tmpbnlji2s3/files/d/f/0/dataset_df0ed7d0-3076-46fe-b26d-3132480af501.dat" -b    -gml -o "/tmp/tmpbnlji2s3/job_working_directory/000/99/outputs/galaxy_dataset_7ce38947-c057-45ea-9ee4-1e6d8bb5dbf9.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmpbnlji2s3/job_working_directory/000/99/outputs/galaxy_dataset_7ce38947-c057-45ea-9ee4-1e6d8bb5dbf9.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | bipartite | ` true ` |
       | compound | ` false ` |
       | reaction | ` false ` |
       | tab | ` false ` |
       | gml | ` true ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Sbml2Graph (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Sbml2Graph -i "/tmp/tmpbnlji2s3/files/3/8/9/dataset_389efd44-b94c-46bb-881f-6620ef107250.dat"   -r  -gml -o "/tmp/tmpbnlji2s3/job_working_directory/000/101/outputs/galaxy_dataset_b04c48a2-2db8-4619-b278-c37fce00b055.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmpbnlji2s3/job_working_directory/000/101/outputs/galaxy_dataset_b04c48a2-2db8-4619-b278-c37fce00b055.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | bipartite | ` false ` |
       | compound | ` false ` |
       | reaction | ` true ` |
       | tab | ` false ` |
       | gml | ` true ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Sbml2Tab (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Sbml2Tab -i "-->" -r "<==>" -in "/tmp/tmpbnlji2s3/files/c/e/6/dataset_ce69a28c-16d4-4e65-8b6b-199c269f4d96.dat" -out "/tmp/tmpbnlji2s3/job_working_directory/000/103/outputs/galaxy_dataset_8a031349-4335-4b23-9b24-1bde3804e544.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | i | ` "-->" ` |
       | r | ` "<==>" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Sbml2Tab (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Sbml2Tab -i "->" -r "=" -in "/tmp/tmpbnlji2s3/files/4/3/4/dataset_434cd515-129c-4040-a80e-a1d9a3ba2eb8.dat" -out "/tmp/tmpbnlji2s3/job_working_directory/000/105/outputs/galaxy_dataset_699c19f2-bc92-47a8-8f9f-c82321496111.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | i | ` "->" ` |
       | r | ` "=" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetChargesFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile -cc "2" -ci "1"   -n "0" -sbml "/tmp/tmpbnlji2s3/files/a/f/c/dataset_afc8e733-a93f-4426-8c49-15c1f63f549d.dat" -tab "/tmp/tmpbnlji2s3/files/6/e/b/dataset_6ebb6136-9cf3-405e-9b67-6af87ad23ad7.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/108/outputs/galaxy_dataset_93e7782a-ea86-4477-831d-4f766f083241.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _94194a18_790d_4292_be0d_845155f2589d
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colcharge | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetChargesFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile -cc "2" -ci "1"   -n "0" -sbml "/tmp/tmpbnlji2s3/files/d/c/d/dataset_dcd3ad9c-ee9c-411d-97e4-4aa7ec41ac0e.dat" -tab "/tmp/tmpbnlji2s3/files/1/b/e/dataset_1bea0e1e-8d2c-40c7-a271-d14ad7792ef8.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/111/outputs/galaxy_dataset_27e1d464-8a04-4fe8-a463-d992c25014c5.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      1 attributions
      Parsing Bionetwork _8587eb4c_dd52_4029_b114_6526e9703212
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colcharge | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetChargesFromFile (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile -cc "2" -ci "1"   -n "1" -sbml "/tmp/tmpbnlji2s3/files/1/0/e/dataset_10e2d861-07a2-4960-8c7f-667064269119.dat" -tab "/tmp/tmpbnlji2s3/files/3/f/0/dataset_3f08a019-eadd-4aa2-b153-461e6e896e04.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/114/outputs/galaxy_dataset_95ad3522-a6e3-4c8b-8df3-04bea4b19ede.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      1 attributions
      Parsing Bionetwork _85fc2703_8e30_4fb1_afd2_0f40950e6e26
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colcharge | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "1" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetChargesFromFile (Test #4)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile -cc "2" -ci "1"   -n "0" -sbml "/tmp/tmpbnlji2s3/files/5/f/c/dataset_5fc3f15d-22dc-4bf3-a671-a7b1ad8eaac4.dat" -tab "/tmp/tmpbnlji2s3/files/2/a/1/dataset_2a1e72d4-e81e-4b05-bbc8-6e68e5104efb.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/117/outputs/galaxy_dataset_306b0610-3529-4805-a7ac-ed09ea1dd256.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _ec56a8f5_5341_427a_91be_2b4bac485a37
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colcharge | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetChargesFromFile (Test #5)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetChargesFromFile -cc "2" -ci "1" -p -s -n "0" -sbml "/tmp/tmpbnlji2s3/files/2/f/b/dataset_2fbac1d9-b487-4696-8c7d-78bbb6f32e35.dat" -tab "/tmp/tmpbnlji2s3/files/0/a/4/dataset_0a47bdd6-bfbd-4dcc-a8a0-f52bf20d48fc.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/120/outputs/galaxy_dataset_8b75a0d6-61c8-4c35-8906-7cf0a0ca6f0e.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      3 attributions
      Parsing Bionetwork Xfm1158
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Pathways...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colcharge | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` true ` |
       | s | ` true ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetEcsFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetEcsFromFile -cec "2" -ci "1"  -n "0" -sbml "/tmp/tmpbnlji2s3/files/5/8/9/dataset_5891a705-e99c-45a2-b734-f45923b7a59f.dat" -tab "/tmp/tmpbnlji2s3/files/8/e/e/dataset_8eef8f90-c48d-47e7-a1e9-a85d02b1c2ed.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/123/outputs/galaxy_dataset_49c948d9-ccc2-4433-9f29-3e17bf308ac8.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 reactions processed
      Parsing Bionetwork _7aa574d8_04a9_4ff2_86c1_9e4cbe3da978
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colec | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetEcsFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetEcsFromFile -cec "2" -ci "1"  -n "0" -sbml "/tmp/tmpbnlji2s3/files/b/4/e/dataset_b4e58c93-fe3b-441d-ab33-bd6578d0b622.dat" -tab "/tmp/tmpbnlji2s3/files/0/0/a/dataset_00a88d69-1a2d-4f6a-b8db-60815d772a8e.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/126/outputs/galaxy_dataset_0227350f-923a-42c6-b888-019bd24e6483.dat"
      ```
    **Exit Code:**

    * ```console
      1
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      ********
      [Warning]Attribute "1.2.3.4.5" not well formatted
      ********
      Error in setting ECs

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colec | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetFormulasFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetFormulasFromFile -cf "2" -ci "1"   -n "0" -sbml "/tmp/tmpbnlji2s3/files/c/d/8/dataset_cd8f219c-913e-47b1-8167-d6f9b5078ad3.dat" -tab "/tmp/tmpbnlji2s3/files/b/c/4/dataset_bc498c9b-47b0-4eb6-b763-5c004cf5c97f.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/129/outputs/galaxy_dataset_62ecdae2-e804-41af-924b-e812b4fc05b7.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _52a03f2c_6644_45f5_a351_e2b4b95e2e67
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colformula | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetFormulasFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetFormulasFromFile -cf "2" -ci "1"   -n "0" -sbml "/tmp/tmpbnlji2s3/files/5/c/0/dataset_5c0215ca-1f0d-4865-8fbe-86f62e274be2.dat" -tab "/tmp/tmpbnlji2s3/files/7/b/5/dataset_7b5da50f-94b8-47fa-898b-1013d411892a.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/132/outputs/galaxy_dataset_d5627de4-9ab6-475a-8166-77c7de69b661.dat"
      ```
    **Exit Code:**

    * ```console
      1
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      ********
      [Warning]Attribute "12CH4O" not well formatted
      ********
      Error in SbmlSetFormula

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colformula | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetGprsFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetGprsFromFile -cgpr "2" -ci "1"  -n "0" -sbml "/tmp/tmpbnlji2s3/files/a/c/6/dataset_ac6c1c55-7cfd-4bf8-be33-7c8645f9d716.dat" -tab "/tmp/tmpbnlji2s3/files/c/4/b/dataset_c4b6446b-d979-46de-8529-b94689d0ddc7.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/135/outputs/galaxy_dataset_e7d4bf4f-721f-4744-9b39-d016b1f5ae71.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 gene associations created
      Parsing Bionetwork _d6338923_3155_42ec_857b_e1f82ee8d33a
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colgpr | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetIdsFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile -cnew "2" -ci "1"   -o "METABOLITE" -n "0" -sbml "/tmp/tmpbnlji2s3/files/1/b/e/dataset_1be2d2d2-0f33-4953-bf10-a6a8b17a18dd.dat" -tab "/tmp/tmpbnlji2s3/files/9/c/0/dataset_9c091d61-804b-46e8-8f2b-e7c1074f5197.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/138/outputs/galaxy_dataset_9d1926b5-32cc-4a67-8b60-ac0daa44cbb2.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 entities processed
      Parsing Bionetwork _28ef2d36_04c0_41ce_8b5a_e1ccca4b2f70
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "METABOLITE" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetIdsFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile -cnew "2" -ci "1"   -o "REACTION" -n "0" -sbml "/tmp/tmpbnlji2s3/files/5/9/b/dataset_59b6a59f-c195-4376-88aa-fa50d4cdc1f5.dat" -tab "/tmp/tmpbnlji2s3/files/2/6/5/dataset_26577944-5f99-4194-8173-600a2c0b616c.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/141/outputs/galaxy_dataset_9b570d1b-b8fe-4baf-b770-f1b832baa7c8.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 entities processed
      Parsing Bionetwork _1aa689ad_c592_4e75_9957_248c2fc72983
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "REACTION" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetIdsFromFile (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile -cnew "2" -ci "1"   -o "PATHWAY" -n "0" -sbml "/tmp/tmpbnlji2s3/files/3/7/e/dataset_37e6676f-acf1-4998-816d-cfce7981441c.dat" -tab "/tmp/tmpbnlji2s3/files/c/f/2/dataset_cf2ed1f2-a6ce-455a-a040-68edd2308abe.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/144/outputs/galaxy_dataset_481df116-2c59-42c4-acde-8c0a6bd74c73.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 entities processed
      Parsing Bionetwork Xfm1158
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "PATHWAY" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetIdsFromFile (Test #4)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile -cnew "2" -ci "1"   -o "GENE" -n "0" -sbml "/tmp/tmpbnlji2s3/files/2/d/5/dataset_2d59cce7-f87b-4de4-a6e2-63f83bc0e1e3.dat" -tab "/tmp/tmpbnlji2s3/files/0/1/7/dataset_0176a854-2ca6-4b22-b817-dec6f5409b61.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/147/outputs/galaxy_dataset_5fd0cded-074f-41fb-bc15-088df35b5131.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 entities processed
      Parsing Bionetwork Xfm1158
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Pathways...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "GENE" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetIdsFromFile (Test #5)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetIdsFromFile -cnew "2" -ci "1"   -o "COMPARTMENT" -n "0" -sbml "/tmp/tmpbnlji2s3/files/f/f/e/dataset_ffeff273-8718-4dec-8e1e-206b48977b6d.dat" -tab "/tmp/tmpbnlji2s3/files/8/5/4/dataset_854522d7-c4d5-472a-ac58-fb1d3b289f95.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/150/outputs/galaxy_dataset_311e62ec-cfda-4fc6-8bee-ee39ad46cb2c.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 entities processed
      Parsing Bionetwork Xfm1158
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Pathways...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "COMPARTMENT" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetNamesFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetNamesFromFile -cname "2" -ci "1"   -o "METABOLITE" -n "0" -sbml "/tmp/tmpbnlji2s3/files/d/6/f/dataset_d6fe78e4-3f5f-4885-99ca-5f64c4b9b196.dat" -tab "/tmp/tmpbnlji2s3/files/0/6/4/dataset_0642fa9e-2ba6-4e35-8709-43eaf56682d9.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/153/outputs/galaxy_dataset_57700210-25ec-4a51-86f2-b8d9387f9d39.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _a54d0c70_aa28_4130_bd21_1e8e0b05777d
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "METABOLITE" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetNamesFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetNamesFromFile -cname "2" -ci "1"   -o "REACTION" -n "0" -sbml "/tmp/tmpbnlji2s3/files/d/1/e/dataset_d1eb56bf-fa18-4cb2-a925-55f23a7b98b5.dat" -tab "/tmp/tmpbnlji2s3/files/8/1/4/dataset_8145b69c-1387-4911-be0f-fbed87120adb.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/156/outputs/galaxy_dataset_048723cc-5f8c-40c1-b3f0-9e3f22ec66f9.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _2a6dfde4_757d_4459_bbec_0863b611fc9e
      Generating Flux Balance Constraints modules...
      Generating Pathways...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "REACTION" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetNamesFromFile (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetNamesFromFile -cname "2" -ci "1"   -o "PATHWAY" -n "0" -sbml "/tmp/tmpbnlji2s3/files/a/3/d/dataset_a3dc6843-bff7-432e-9cf1-029b5f005b40.dat" -tab "/tmp/tmpbnlji2s3/files/b/9/f/dataset_b9f61a1d-3b0c-4369-92ad-7ba4035329bf.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/159/outputs/galaxy_dataset_ced24086-360c-4d06-a6d3-689b96c62a3c.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 attributions
      Parsing Bionetwork Xfm1158
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "PATHWAY" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetNamesFromFile (Test #4)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetNamesFromFile -cname "2" -ci "1"   -o "GENE" -n "0" -sbml "/tmp/tmpbnlji2s3/files/3/4/7/dataset_347e5ec8-3545-48ab-8aed-1bed0fcab5ab.dat" -tab "/tmp/tmpbnlji2s3/files/a/8/e/dataset_a8e65236-e745-45fd-83b4-4d4410cb9492.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/162/outputs/galaxy_dataset_71ec0c6b-af0d-4acf-bc10-8be3e3b08bc2.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      2 attributions
      Parsing Bionetwork Xfm1158
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Chemical formula not in good format (C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998) for M_BIOMASS_XF_c
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colname | ` "2" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "GENE" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetPathwaysFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetPathwaysFromFile -cp "2" -sep "|" -ci "1"  -n "0" -sbml "/tmp/tmpbnlji2s3/files/f/7/b/dataset_f7bd6649-7efe-4cd5-8772-7a908ffc5271.dat" -tab "/tmp/tmpbnlji2s3/files/f/8/9/dataset_f89c1d16-f584-4d95-88f1-5d1792b9de44.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/165/outputs/galaxy_dataset_1c219058-6d0d-4aef-ae53-c852804d98f4.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      3 reactions processed
      Parsing Bionetwork _db725063_98c8_4818_9635_4ccc501e7147
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colp | ` "2" ` |
       | sep | ` "|" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetPathwaysFromFile (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetPathwaysFromFile -cp "2" -sep " + " -ci "1"  -n "0" -sbml "/tmp/tmpbnlji2s3/files/3/b/0/dataset_3b00a01c-6c9c-4dd3-88f6-c9ed8a2cb616.dat" -tab "/tmp/tmpbnlji2s3/files/e/7/4/dataset_e741aa61-eca1-424c-8f7b-adafbe325461.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/168/outputs/galaxy_dataset_0641cd08-1c5c-4076-9b66-6df4977a19bf.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      3 reactions processed
      Parsing Bionetwork _faf23503_9954_459a_9beb_41b9561ca263
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colp | ` "2" ` |
       | sep | ` " + " ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlSetRefsFromFile (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlSetRefsFromFile -cr "2" -ref "InChi" -ci "1"   -o "METABOLITE" -n "0" -sbml "/tmp/tmpbnlji2s3/files/8/8/e/dataset_88e3467d-7bdd-4ec1-be1e-27b7fc6d3449.dat" -tab "/tmp/tmpbnlji2s3/files/8/e/0/dataset_8e046c96-ed0d-4f95-a0f6-5a42005f7082.dat" -c "#" -out "/tmp/tmpbnlji2s3/job_working_directory/000/171/outputs/galaxy_dataset_e98f6458-e312-4b8b-a83c-c0766c69dc28.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 
      2 attributions
      Parsing Bionetwork _51e43cf0_8947_481b_89c4_99406f195423
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colRef | ` "2" ` |
       | ref | ` "InChi" ` |
       | colid | ` "1" ` |
       | p | ` false ` |
       | s | ` false ` |
       | o | ` "METABOLITE" ` |
       | nSkip | ` "0" ` |
       | c | ` "#" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SbmlToMetaboliteTable (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh attributes.SbmlToMetaboliteTable -s "/tmp/tmpbnlji2s3/files/0/d/b/dataset_0dbc49b6-ba59-45cf-a13b-922b25f772b5.dat" -o "/tmp/tmpbnlji2s3/job_working_directory/000/173/outputs/galaxy_dataset_220ec212-31f5-45e3-9061-35320b220b94.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_ScopeNetwork (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.ScopeNetwork -i "/tmp/tmpbnlji2s3/files/7/7/f/dataset_77fc2399-a5ac-43b0-b4b3-a0959ea6918f.dat" -s "/tmp/tmpbnlji2s3/files/2/6/7/dataset_267a28a3-8dd5-48ac-9fe0-a7247d64f1b8.dat" -sc "/tmp/tmpbnlji2s3/files/a/3/3/dataset_a3303c92-769a-4404-a576-c4f9d6ae02aa.dat"    -o "/tmp/tmpbnlji2s3/job_working_directory/000/177/outputs/galaxy_dataset_9594028a-938c-4e07-8b9e-170fb14166c0.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model 
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model 

      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'
      WARNING:galaxy.model:Datatype class not found for extension 'gml'

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox
      /tmp/tmpbnlji2s3/job_working_directory/000/177/outputs/galaxy_dataset_9594028a-938c-4e07-8b9e-170fb14166c0.dat created.

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | includeSides | ` false ` |
       | reactionToIgnoreFile | ` None ` |
       | trace | ` false ` |
       | asTable | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SeedsAndTargets (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.SeedsAndTargets -i "/tmp/tmpbnlji2s3/files/e/2/d/dataset_e2da2a50-d401-491e-8a34-9e362a91b3e6.dat" -s       -o "/tmp/tmpbnlji2s3/job_working_directory/000/179/outputs/galaxy_dataset_dc530832-8980-4a05-87db-b3baf1b119a1.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | inputSide | ` None ` |
       | comp | ` "" ` |
       | source | ` true ` |
       | sink | ` false ` |
       | notsource | ` false ` |
       | notsink | ` false ` |
       | keepIsolated | ` false ` |
       | useBorensteinAlg | ` false ` |
       | useInternal | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SeedsAndTargets (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.SeedsAndTargets -i "/tmp/tmpbnlji2s3/files/4/e/0/dataset_4e09b8dc-9708-4973-ae50-5471a93c135d.dat" -c "e"  -t     -in -o "/tmp/tmpbnlji2s3/job_working_directory/000/181/outputs/galaxy_dataset_2e59ab66-c3a5-4eaf-bb7d-c7de6fd69780.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | inputSide | ` None ` |
       | comp | ` "e" ` |
       | source | ` false ` |
       | sink | ` true ` |
       | notsource | ` false ` |
       | notsink | ` false ` |
       | keepIsolated | ` false ` |
       | useBorensteinAlg | ` false ` |
       | useInternal | ` true ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SeedsAndTargets (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.SeedsAndTargets -i "/tmp/tmpbnlji2s3/files/7/e/9/dataset_7e9d17e3-9cff-4744-9f72-811c37ab9ba4.dat" -c "e"  -t    -B  -o "/tmp/tmpbnlji2s3/job_working_directory/000/183/outputs/galaxy_dataset_e2891d6a-a594-4624-af6e-663ba98e6460.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      done.

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | inputSide | ` None ` |
       | comp | ` "e" ` |
       | source | ` false ` |
       | sink | ` true ` |
       | notsource | ` false ` |
       | notsink | ` false ` |
       | keepIsolated | ` false ` |
       | useBorensteinAlg | ` true ` |
       | useInternal | ` false ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SideCompoundsScan (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.SideCompoundsScan -i "/tmp/tmpbnlji2s3/files/7/b/1/dataset_7b1b2351-cd41-417f-89b6-ce4a7971561c.dat"   -d "400"   -m "no" -o "/tmp/tmpbnlji2s3/job_working_directory/000/185/outputs/galaxy_dataset_aa7342df-d8b8-4d2e-8d74-0fe80e168619.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      /tmp/tmpbnlji2s3/files/7/b/1/dataset_7b1b2351-cd41-417f-89b6-ce4a7971561c.dat
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      Scaning...
      done
      found 6 side compound among 1107 compounds
      /tmp/tmpbnlji2s3/job_working_directory/000/185/outputs/galaxy_dataset_aa7342df-d8b8-4d2e-8d74-0fe80e168619.dat

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideOnly | ` false ` |
       | noReportValue | ` false ` |
       | degree | ` "400" ` |
       | degreePrecentile | ` "nan" ` |
       | flagInorganic | ` false ` |
       | flagNoFormula | ` false ` |
       | parallelEdge | ` "nan" ` |
       | mergingStrat | ` "no" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_SideCompoundsScan (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh networkAnalysis.SideCompoundsScan -i "/tmp/tmpbnlji2s3/files/e/e/6/dataset_ee62536c-bf71-4c5f-85ba-2b61ecd76bb5.dat"  -id -d "400"   -m "no" -o "/tmp/tmpbnlji2s3/job_working_directory/000/187/outputs/galaxy_dataset_0f24fceb-82ad-4b11-a2c6-67b2d799e531.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      reading SBML...
      /tmp/tmpbnlji2s3/files/e/e/6/dataset_ee62536c-bf71-4c5f-85ba-2b61ecd76bb5.dat
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Verifying enabled Plugins...
      Parsing model Xfm1158
      Starting fbc version 2 plugin...
      Starting groups plugin...
      Starting note plugin...
      Starting annot plugin...
      End Parsing model Xfm1158
      Creating network...
      Scaning...
      done
      found 6 side compound among 1107 compounds
      /tmp/tmpbnlji2s3/job_working_directory/000/187/outputs/galaxy_dataset_0f24fceb-82ad-4b11-a2c6-67b2d799e531.dat

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | sideOnly | ` false ` |
       | noReportValue | ` true ` |
       | degree | ` "400" ` |
       | degreePrecentile | ` "nan" ` |
       | flagInorganic | ` false ` |
       | flagNoFormula | ` false ` |
       | parallelEdge | ` "nan" ` |
       | mergingStrat | ` "no" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "rdf" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Tab2Sbml (Test #1)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Tab2Sbml -ci "1" -cf "2"   -e "_b" -i "-->" -r "<==>" -in "/tmp/tmpbnlji2s3/files/9/7/5/dataset_975a0b6b-3b95-425d-bda6-63505685d8ff.dat" -id "NA"  -dcpt "c" -n "0" -sbml "/tmp/tmpbnlji2s3/job_working_directory/000/189/outputs/galaxy_dataset_826c7190-c896-4b70-9173-b40862d12352.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      The input file looks good and contains 7 reactions
      7 reactions, 8 metabolites and 2 compartments created
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Parsing Bionetwork _9386a96f_532a_4cc4_ae75_531e0a2325c3
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colid | ` "1" ` |
       | colformula | ` "2" ` |
       | rp | ` false ` |
       | mp | ` false ` |
       | e | ` "_b" ` |
       | i | ` "-->" ` |
       | r | ` "<==>" ` |
       | id | ` e3ca74eaa0c8194d ` |
       | createCompartment | ` false ` |
       | defaultCompartment | ` "c" ` |
       | nSkip | ` "0" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "tabular" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Tab2Sbml (Test #2)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Tab2Sbml -ci "2" -cf "3"   -e "_b" -i "-->" -r "<==>" -in "/tmp/tmpbnlji2s3/files/e/d/d/dataset_eddaa7d9-3358-4460-90cb-c25d8d04454c.dat" -id "NA"  -dcpt "c" -n "0" -sbml "/tmp/tmpbnlji2s3/job_working_directory/000/191/outputs/galaxy_dataset_6ee28d43-4579-42f1-a51b-4199ddfef639.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      The input file looks good and contains 7 reactions
      7 reactions, 8 metabolites and 2 compartments created
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Parsing Bionetwork _1c78b2c6_8dc9_4aac_9857_bd09a11a7187
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colid | ` "2" ` |
       | colformula | ` "3" ` |
       | rp | ` false ` |
       | mp | ` false ` |
       | e | ` "_b" ` |
       | i | ` "-->" ` |
       | r | ` "<==>" ` |
       | id | ` e3ca74eaa0c8194d ` |
       | createCompartment | ` false ` |
       | defaultCompartment | ` "c" ` |
       | nSkip | ` "0" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "tabular" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Tab2Sbml (Test #3)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Tab2Sbml -ci "1" -cf "2"   -e "_b" -i "->" -r "=" -in "/tmp/tmpbnlji2s3/files/c/1/2/dataset_c1292392-19b3-4601-be04-c1dda1a8460d.dat" -id "NA"  -dcpt "c" -n "0" -sbml "/tmp/tmpbnlji2s3/job_working_directory/000/193/outputs/galaxy_dataset_fd7601fc-e1cf-419a-9fc4-f35c7d202d30.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      The input file looks good and contains 7 reactions
      7 reactions, 8 metabolites and 2 compartments created
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Parsing Bionetwork _7b502248_c630_4394_800d_99839d85b790
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colid | ` "1" ` |
       | colformula | ` "2" ` |
       | rp | ` false ` |
       | mp | ` false ` |
       | e | ` "_b" ` |
       | i | ` "->" ` |
       | r | ` "=" ` |
       | id | ` e3ca74eaa0c8194d ` |
       | createCompartment | ` false ` |
       | defaultCompartment | ` "c" ` |
       | nSkip | ` "0" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "tabular" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Tab2Sbml (Test #4)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Tab2Sbml -ci "1" -cf "2" -rp -mp -e "_e" -i "-->" -r "<==>" -in "/tmp/tmpbnlji2s3/files/4/6/d/dataset_46d63a94-686a-4382-87a5-8cbd0502875c.dat" -id "NA" -cpt -dcpt "c" -n "0" -sbml "/tmp/tmpbnlji2s3/job_working_directory/000/195/outputs/galaxy_dataset_f31bca14-3a89-4699-84c1-53274fc8514f.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      The input file looks good and contains 7 reactions
      7 reactions, 8 metabolites and 2 compartments created
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Parsing Bionetwork _c79b332c_76e8_45a1_b6c4_58e4c2849df5
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Notes...
      Generating Model Annotations...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colid | ` "1" ` |
       | colformula | ` "2" ` |
       | rp | ` true ` |
       | mp | ` true ` |
       | e | ` "_e" ` |
       | i | ` "-->" ` |
       | r | ` "<==>" ` |
       | id | ` e3ca74eaa0c8194d ` |
       | createCompartment | ` true ` |
       | defaultCompartment | ` "c" ` |
       | nSkip | ` "0" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "tabular" ` |



  </div></details>


* <details class="rcorners light-green"><summary class="light-green">&#9989; met4j_Tab2Sbml (Test #5)</summary><div class="padded">

    **Command Line:**

    * ```console
      sh /usr/bin/met4j.sh convert.Tab2Sbml -ci "1" -cf "2"   -e "_b" -i "-->" -r "<==>" -in "/tmp/tmpbnlji2s3/files/2/b/e/dataset_2be1c9c3-8db2-464f-ba7e-5e02f1cee4c5.dat" -id "myModel"  -dcpt "c" -n "0" -sbml "/tmp/tmpbnlji2s3/job_working_directory/000/197/outputs/galaxy_dataset_7cf825ba-7f9f-48b6-b7cc-8283ce9c3c44.dat"
      ```
    **Exit Code:**

    * ```console
      0
      ```
    **Standard Error:**

    * ```console
      The input file looks good and contains 7 reactions
      7 reactions, 8 metabolites and 2 compartments created
      ERROR StatusLogger Reconfiguration failed: No configuration found for '5cb0d902' at 'null' in 'null'
      Parsing Bionetwork myModel
      Generating Pathways...
      Generating Flux Balance Constraints modules...
      Generating Model Annotations...
      Generating Model Notes...

      ```
    **Standard Output:**

    * ```console
      Launch met4j-toolbox

      ```
   **Job Parameters:**

   *   | Job parameter | Parameter value |
       | ------------- | --------------- |
       | colid | ` "1" ` |
       | colformula | ` "2" ` |
       | rp | ` false ` |
       | mp | ` false ` |
       | e | ` "_b" ` |
       | i | ` "-->" ` |
       | r | ` "<==>" ` |
       | id | ` ca45abca23c6cc56942bd59ab77fe8a9 ` |
       | createCompartment | ` false ` |
       | defaultCompartment | ` "c" ` |
       | nSkip | ` "0" ` |
       | chromInfo | ` "/tmp/tmpbnlji2s3/galaxy-dev/tool-data/shared/ucsc/chrom/?.len" ` |
       | dbkey | ` "?" ` |
       | \_\_input\_ext | ` "tabular" ` |



  </div></details>


</details>
')); </script> </body> </html> \ No newline at end of file
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tools/convert/SBMLwizard/SBMLwizard.xml Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,79 @@ +<?xml version="1.0" encoding="UTF-8"?> +<tool id="met4j_SBMLwizard" name="SBMLwizard" version="MET4J_VERSION_TEST"> + <description>General SBML model processing</description> + <xrefs> + <xref type="bio.tools">met4j</xref> + </xrefs> + <requirements> + <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:MET4J_VERSION_TEST</container> + </requirements> + <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh convert.SBMLwizard -s "$inputPath" +#if str($inputSide) != 'None': + -rc "$inputSide" +#end if + $removeIsolated +#if str($inputReactions) != 'None': + -rr "$inputReactions" +#end if + $removeNoFlux +#if str($mergingStrat): + -mc "$mergingStrat" +#end if + $removeDuplicated +#if str($exchangeCompToRemove): + -rEX "$exchangeCompToRemove" +#end if + -o "$outputPath" +]]></command> + <inputs> + <param argument="-s" format="sbml" label="input SBML file" name="inputPath" optional="false" type="data" value=""/> + <param argument="-rc" format="txt" label="file containing identifiers of compounds to remove from the metabolic network" name="inputSide" optional="true" type="data" value=""/> + <param argument="-ric" checked="false" falsevalue="" label="remove isolated compounds (not involved in any reaction)" name="removeIsolated" truevalue="-ric" type="boolean" value="false"/> + <param argument="-rr" format="txt" label="file containing identifiers of reactions to remove from the metabolic network" name="inputReactions" optional="true" type="data" value=""/> + <param argument="-r0" checked="false" falsevalue="" label="remove reactions with lower and upper flux bounds both set to 0.0" name="removeNoFlux" truevalue="-r0" type="boolean" value="false"/> + <param argument="-mc" label="merge compartments using the provided strategy. No merge by default. "by_name" can be used if names are consistent and unambiguous across compartments, "by_id" can be used if compartment suffix is present in compounds identifiers (id in form "xxx_y" with xxx as base identifier and y as compartment label)." name="mergingStrat" optional="true" type="select" value="no"> + <option selected="true" value="no">no</option> + <option value="by_name">by_name</option> + <option value="by_id">by_id</option> + </param> + <param argument="-rdr" checked="false" falsevalue="" label="remove duplicated reactions (same reactants, same GPR)" name="removeDuplicated" truevalue="-rdr" type="boolean" value="false"/> + <param argument="-rEX" label="remove exchange reactions and species from given exchange compartment identifier" name="exchangeCompToRemove" optional="true" type="text" value=""> + <sanitizer invalid_char="_"> + <valid initial="string.printable"/> + </sanitizer> + </param> + </inputs> + <outputs> + <data format="sbml" name="outputPath"/> + </outputs> + <tests> + <test> + <param name="inputPath" value="Human-GEM_pathways.xml"/> + <param name="removeIsolated" value="true"/> + <param name="removeNoFlux" value="true"/> + <param name="mergingStrat" value="by_id"/> + <param name="removeDuplicated" value="true"/> + <param name="exchangeCompToRemove" value="s"/> + <output ftype="sbml" name="outputPath"> + <assert_contents> + <has_text text="</sbml>"/> + </assert_contents> + </output> + </test> + <test> + <param name="inputPath" value="XF_network.sbml"/> + <param name="removeIsolated" value="true"/> + <param name="removeNoFlux" value="true"/> + <param name="removeDuplicated" value="true"/> + <param name="inputSide" value="XF_network_C_Side.tab"/> + <param name="inputReactions" value="XF_network_R_Seed.tab"/> + <output ftype="sbml" name="outputPath"> + <assert_contents> + <has_text text="</sbml>"/> + </assert_contents> + </output> + </test> + </tests> + <help><![CDATA[General SBML model processing including compound removal (such as side compounds or isolated compounds), reaction removal (ex. blocked or exchange reaction), and compartment merging]]></help> + <citations/> +</tool>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tools/convert/SBMLwizard/test-data/Human-GEM_pathways.xml Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,7661 @@ +<?xml version="1.0" encoding="UTF-8"?> +<sbml fbc:required="false" groups:required="false" level="3" version="2" xmlns="http://www.sbml.org/sbml/level3/version2/core" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1"> + <model fbc:strict="true" id="HumanGEM" metaid="HumanGEM" name="Generic genome-scale metabolic model of Homo sapiens"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Genome-scale metabolic models are valuable tools to study metabolism and provide a scaffold for the integrative analysis of omics data. This is the latest version of Human-GEM, which is a genome-scale metabolic model of a generic human cell. The objective of Human-GEM is to serve as a community model for enabling integrative and mechanistic studies of human metabolism.</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#HumanGEM"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/taxonomy/9606"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:listOfObjectives fbc:activeObjective="obj"> + <fbc:objective fbc:id="obj" fbc:type="maximize"> + <fbc:listOfFluxObjectives> + <fbc:fluxObjective fbc:coefficient="1" fbc:reaction="R_biomass_human"/> + </fbc:listOfFluxObjectives> + </fbc:objective> + </fbc:listOfObjectives> + <fbc:listOfGeneProducts> + <fbc:geneProduct fbc:id="ENSG00000023697" fbc:label="ENSG00000023697" fbc:name="ENSG00000023697" metaid="_12915ddf-e017-4a38-a80d-e9982f8ac7cc"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000023697</p> + <p>hgnc.symbol: DERA</p> + <p>ncbigene: 51071</p> + <p>uniprot: Q9Y315</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000130313" fbc:label="ENSG00000130313" fbc:name="ENSG00000130313" metaid="b7f31dab-0da6-4c9e-9c76-6ea1952d4f6b"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000130313</p> + <p>hgnc.symbol: PGLS</p> + <p>ncbigene: 25796</p> + <p>uniprot: O95336</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000157353" fbc:label="ENSG00000157353" fbc:name="ENSG00000157353" metaid="f2bfd1a8-b479-4718-bb3f-030aed87a562"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000157353</p> + <p>hgnc.symbol: FCSK</p> + <p>ncbigene: 197258</p> + <p>uniprot: Q8N0W3</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000114268" fbc:label="ENSG00000114268" fbc:name="ENSG00000114268" metaid="d1ad0711-77a6-4e33-85ba-dff0e0e56b5c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000114268</p> + <p>hgnc.symbol: PFKFB4</p> + <p>ncbigene: 5210</p> + <p>uniprot: Q16877</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000197417" fbc:label="ENSG00000197417" fbc:name="ENSG00000197417" metaid="_36aac772-72a3-44fd-97f3-84213d36d9e2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000197417</p> + <p>hgnc.symbol: SHPK</p> + <p>ncbigene: 23729</p> + <p>uniprot: Q9UHJ6</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000117411" fbc:label="ENSG00000117411" fbc:name="ENSG00000117411" metaid="_8a05124a-b1a0-492d-83cd-3aac293621f3"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000117411</p> + <p>hgnc.symbol: B4GALT2</p> + <p>ncbigene: 8704</p> + <p>uniprot: O60909</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000170525" fbc:label="ENSG00000170525" fbc:name="ENSG00000170525" metaid="_37605db9-6c99-4033-a556-016ad0da13f8"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000170525</p> + <p>hgnc.symbol: PFKFB3</p> + <p>ncbigene: 5209</p> + <p>uniprot: Q16875</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000229937" fbc:label="ENSG00000229937" fbc:name="ENSG00000229937" metaid="_58f34e8c-42a2-4a2a-8de9-714e67c5b732"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000229937</p> + <p>hgnc.symbol: PRPS1L1</p> + <p>ncbigene: 221823</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000085662" fbc:label="ENSG00000085662" fbc:name="ENSG00000085662" metaid="fb8056b5-fb1e-42ed-b1e3-0f3530b674e2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000085662</p> + <p>hgnc.symbol: AKR1B1</p> + <p>ncbigene: 231</p> + <p>uniprot: P15121</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000101911" fbc:label="ENSG00000101911" fbc:name="ENSG00000101911" metaid="b98d9eef-49ad-45d4-8889-02e296604457"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000101911</p> + <p>hgnc.symbol: PRPS2</p> + <p>ncbigene: 5634</p> + <p>uniprot: P11908</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000138030" fbc:label="ENSG00000138030" fbc:name="ENSG00000138030" metaid="a0549ed3-97c1-4eb0-9891-467f734cfd29"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000138030</p> + <p>hgnc.symbol: KHK</p> + <p>ncbigene: 3795</p> + <p>uniprot: P50053</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000167363" fbc:label="ENSG00000167363" fbc:name="ENSG00000167363" metaid="_940a3aa4-9800-407e-a89c-3c2940a0c773"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000167363</p> + <p>hgnc.symbol: FN3K</p> + <p>ncbigene: 64122</p> + <p>uniprot: Q9H479</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000160211" fbc:label="ENSG00000160211" fbc:name="ENSG00000160211" metaid="d7d059c0-a147-4808-a248-4b83244f07eb"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000160211</p> + <p>hgnc.symbol: G6PD</p> + <p>ncbigene: 2539</p> + <p>uniprot: P11413</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000090402" fbc:label="ENSG00000090402" fbc:name="ENSG00000090402" metaid="_3ac56916-54f0-4fcd-8dc5-767cbd61ff9b"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000090402</p> + <p>hgnc.symbol: SI</p> + <p>ncbigene: 6476</p> + <p>uniprot: P14410</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000163521" fbc:label="ENSG00000163521" fbc:name="ENSG00000163521" metaid="cb001f39-7403-47ab-a7f6-94ccbf288b16"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000163521</p> + <p>hgnc.symbol: GLB1L</p> + <p>ncbigene: 79411</p> + <p>uniprot: Q6UWU2</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000235376" fbc:label="ENSG00000235376" fbc:name="ENSG00000235376" metaid="fc35bd7a-90b3-4ede-927f-fd37279642dd"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000235376</p> + <p>hgnc.symbol: RPEL1</p> + <p>ncbigene: 729020</p> + <p>uniprot: Q2QD12</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000049239" fbc:label="ENSG00000049239" fbc:name="ENSG00000049239" metaid="_32ef79cb-7c0c-4511-b69b-34ab8e054773"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000049239</p> + <p>hgnc.symbol: H6PD</p> + <p>ncbigene: 9563</p> + <p>uniprot: O95479</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000102393" fbc:label="ENSG00000102393" fbc:name="ENSG00000102393" metaid="_5fc82091-e274-44d1-9963-ee5037073028"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000102393</p> + <p>hgnc.symbol: GLA</p> + <p>ncbigene: 2717</p> + <p>uniprot: P06280</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000109107" fbc:label="ENSG00000109107" fbc:name="ENSG00000109107" metaid="f8bf3621-aa7c-4b44-851a-391c43c7cbb2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000109107</p> + <p>hgnc.symbol: ALDOC</p> + <p>ncbigene: 230</p> + <p>uniprot: P09972</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000285043" fbc:label="ENSG00000285043" fbc:name="ENSG00000285043" metaid="c11eee35-7869-49f9-9544-50a998907f37"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000285043</p> + <p>hgnc.symbol: AC093512.2</p> + <p>ncbigene: 112694756</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000132746" fbc:label="ENSG00000132746" fbc:name="ENSG00000132746" metaid="_471be81a-0170-4a4f-af8d-346cd6ae65e4"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000132746</p> + <p>hgnc.symbol: ALDH3B2</p> + <p>ncbigene: 222</p> + <p>uniprot: P48448</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000141959" fbc:label="ENSG00000141959" fbc:name="ENSG00000141959" metaid="_9b6348d8-9868-49a9-8ea5-b19d1936b26e"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000141959</p> + <p>hgnc.symbol: PFKL</p> + <p>ncbigene: 5211</p> + <p>uniprot: P17858</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000108813" fbc:label="ENSG00000108813" fbc:name="ENSG00000108813" metaid="_7a5c0fbb-1847-4113-bb3b-28088fca4338"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000108813</p> + <p>hgnc.symbol: DLX4</p> + <p>ncbigene: 1748</p> + <p>uniprot: Q92988</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000144591" fbc:label="ENSG00000144591" fbc:name="ENSG00000144591" metaid="_51230f4a-d1e5-4390-9313-7228d09b99fe"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000144591</p> + <p>hgnc.symbol: GMPPA</p> + <p>ncbigene: 29926</p> + <p>uniprot: Q96IJ6</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000213930" fbc:label="ENSG00000213930" fbc:name="ENSG00000213930" metaid="_74d4cb52-23dc-49d0-adc2-7526f07863ab"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000213930</p> + <p>hgnc.symbol: GALT</p> + <p>ncbigene: 2592</p> + <p>uniprot: P07902</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000170266" fbc:label="ENSG00000170266" fbc:name="ENSG00000170266" metaid="e1de023f-00b6-4b3e-9be0-e9ae93a2c334"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000170266</p> + <p>hgnc.symbol: GLB1</p> + <p>ncbigene: 2720</p> + <p>uniprot: P16278</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000241343" fbc:label="ENSG00000241343" fbc:name="ENSG00000241343" metaid="_25cf8431-007a-45f6-b496-f624fde5f63b"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000241343</p> + <p>hgnc.symbol: RPL36A</p> + <p>ncbigene: 6173</p> + <p>uniprot: P83881</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000151005" fbc:label="ENSG00000151005" fbc:name="ENSG00000151005" metaid="_46587b13-0f5e-4416-b277-0a03f5b571eb"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000151005</p> + <p>hgnc.symbol: TKTL2</p> + <p>ncbigene: 84076</p> + <p>uniprot: Q9H0I9</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000123836" fbc:label="ENSG00000123836" fbc:name="ENSG00000123836" metaid="d5c747e3-5a3b-4577-ac04-56469d75e91c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000123836</p> + <p>hgnc.symbol: PFKFB2</p> + <p>ncbigene: 5208</p> + <p>uniprot: O60825</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000116199" fbc:label="ENSG00000116199" fbc:name="ENSG00000116199" metaid="_76a43217-c502-4f65-9a11-d073910cfd5c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000116199</p> + <p>hgnc.symbol: FAM20B</p> + <p>ncbigene: 9917</p> + <p>uniprot: O75063</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000164068" fbc:label="ENSG00000164068" fbc:name="ENSG00000164068" metaid="e4d5b9d5-59c0-4c44-9088-ad7a6080049f"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000164068</p> + <p>hgnc.symbol: RNF123</p> + <p>ncbigene: 63891</p> + <p>uniprot: Q5XPI4</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000100417" fbc:label="ENSG00000100417" fbc:name="ENSG00000100417" metaid="_26c82f2c-e9c8-4d20-9e49-8640aff44e96"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000100417</p> + <p>hgnc.symbol: PMM1</p> + <p>ncbigene: 5372</p> + <p>uniprot: Q92871</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000167531" fbc:label="ENSG00000167531" fbc:name="ENSG00000167531" metaid="_6173500e-92e9-4814-b379-bea6c79b96d6"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000167531</p> + <p>hgnc.symbol: LALBA</p> + <p>ncbigene: 3906</p> + <p>uniprot: P00709</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000149925" fbc:label="ENSG00000149925" fbc:name="ENSG00000149925" metaid="_844a3d97-d13a-4529-a1be-baa8040739b6"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000149925</p> + <p>hgnc.symbol: ALDOA</p> + <p>ncbigene: 226</p> + <p>uniprot: P04075</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000141560" fbc:label="ENSG00000141560" fbc:name="ENSG00000141560" metaid="_5a622d9f-6dee-420e-bb39-e7c40ca653b2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000141560</p> + <p>hgnc.symbol: FN3KRP</p> + <p>ncbigene: 79672</p> + <p>uniprot: Q9HA64</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000100413" fbc:label="ENSG00000100413" fbc:name="ENSG00000100413" metaid="_85b3bca0-ab21-4d12-b312-d8b2b366af39"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000100413</p> + <p>hgnc.symbol: POLR3H</p> + <p>ncbigene: 171568</p> + <p>uniprot: Q9Y535</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000007350" fbc:label="ENSG00000007350" fbc:name="ENSG00000007350" metaid="_6601c12a-ae74-4669-9b3e-db90da268d86"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000007350</p> + <p>hgnc.symbol: TKTL1</p> + <p>ncbigene: 8277</p> + <p>uniprot: P51854</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000184254" fbc:label="ENSG00000184254" fbc:name="ENSG00000184254" metaid="_1bee2946-bc61-47c3-8dbf-7b84f796515d"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000184254</p> + <p>hgnc.symbol: ALDH1A3</p> + <p>ncbigene: 220</p> + <p>uniprot: P47895</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000163931" fbc:label="ENSG00000163931" fbc:name="ENSG00000163931" metaid="dc4a1857-080d-45fc-987e-2adf5620ea3d"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000163931</p> + <p>hgnc.symbol: TKT</p> + <p>ncbigene: 7086</p> + <p>uniprot: P29401</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000147224" fbc:label="ENSG00000147224" fbc:name="ENSG00000147224" metaid="c4d0c0db-49df-4667-a605-36cd16b32f8c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000147224</p> + <p>hgnc.symbol: PRPS1</p> + <p>ncbigene: 5631</p> + <p>uniprot: P60891</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000142657" fbc:label="ENSG00000142657" fbc:name="ENSG00000142657" metaid="beabaf4f-5581-48ed-b522-8dcd497f96aa"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000142657</p> + <p>hgnc.symbol: PGD</p> + <p>ncbigene: 5226</p> + <p>uniprot: P52209</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000086062" fbc:label="ENSG00000086062" fbc:name="ENSG00000086062" metaid="_5e8317c7-1bfe-47e1-bebb-535601d5f6aa"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000086062</p> + <p>hgnc.symbol: B4GALT1</p> + <p>ncbigene: 2683</p> + <p>uniprot: P15291</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000079739" fbc:label="ENSG00000079739" fbc:name="ENSG00000079739" metaid="_224dd45b-ce2d-4b1b-9b2e-b1c2ecbd40c9"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000079739</p> + <p>hgnc.symbol: PGM1</p> + <p>ncbigene: 5236</p> + <p>uniprot: P36871</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000254685" fbc:label="ENSG00000254685" fbc:name="ENSG00000254685" metaid="e68446d0-1583-4e86-a77d-d8dc3ce4f50c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000254685</p> + <p>hgnc.symbol: FPGT</p> + <p>ncbigene: 8790</p> + <p>uniprot: O14772</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000153574" fbc:label="ENSG00000153574" fbc:name="ENSG00000153574" metaid="_3830d3c8-693c-4d4c-bb14-8c9f169e5898"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000153574</p> + <p>hgnc.symbol: RPIA</p> + <p>ncbigene: 22934</p> + <p>uniprot: P49247</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000108602" fbc:label="ENSG00000108602" fbc:name="ENSG00000108602" metaid="a488fe33-4083-4e23-a23a-76ca737cd093"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000108602</p> + <p>hgnc.symbol: ALDH3A1</p> + <p>ncbigene: 218</p> + <p>uniprot: P30838</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000214013" fbc:label="ENSG00000214013" fbc:name="ENSG00000214013" metaid="_2117f97e-9b80-42e9-a912-66e60108428e"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000214013</p> + <p>hgnc.symbol: GANC</p> + <p>ncbigene: 2595</p> + <p>uniprot: Q8TET4</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000104522" fbc:label="ENSG00000104522" fbc:name="ENSG00000104522" metaid="bc4e7c8d-cd54-48a1-b42c-0ebd38d1753c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000104522</p> + <p>hgnc.symbol: TSTA3</p> + <p>ncbigene: 7264</p> + <p>uniprot: Q13630</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000067057" fbc:label="ENSG00000067057" fbc:name="ENSG00000067057" metaid="d6009707-416e-44ba-af3c-bf5d42e5b2ae"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000067057</p> + <p>hgnc.symbol: PFKP</p> + <p>ncbigene: 5214</p> + <p>uniprot: Q01813</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000173540" fbc:label="ENSG00000173540" fbc:name="ENSG00000173540" metaid="_35aa5df1-9cdd-4670-9b8e-1070b94d1a97"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000173540</p> + <p>hgnc.symbol: GMPPB</p> + <p>ncbigene: 29925</p> + <p>uniprot: Q9Y5P6</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000162408" fbc:label="ENSG00000162408" fbc:name="ENSG00000162408" metaid="_14129ba8-0b75-4879-8b15-1391ec64be48"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000162408</p> + <p>hgnc.symbol: NOL9</p> + <p>ncbigene: 79707</p> + <p>uniprot: Q5SY16</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000159399" fbc:label="ENSG00000159399" fbc:name="ENSG00000159399" metaid="e69bc97a-c6e6-4251-b0e8-ad2336c2a6c1"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000159399</p> + <p>hgnc.symbol: HK2</p> + <p>ncbigene: 3099</p> + <p>uniprot: P52789</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000136872" fbc:label="ENSG00000136872" fbc:name="ENSG00000136872" metaid="_8b796b8b-662b-479f-a03d-8f584914568c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000136872</p> + <p>hgnc.symbol: ALDOB</p> + <p>ncbigene: 229</p> + <p>uniprot: P05062</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000197713" fbc:label="ENSG00000197713" fbc:name="ENSG00000197713" metaid="b06a020b-806e-49ce-886c-c05931b71761"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000197713</p> + <p>hgnc.symbol: RPE</p> + <p>ncbigene: 6120</p> + <p>uniprot: Q96AT9</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000115850" fbc:label="ENSG00000115850" fbc:name="ENSG00000115850" metaid="bdf0a3e9-cde6-4941-a89c-f31093c2f23c"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000115850</p> + <p>hgnc.symbol: LCT</p> + <p>ncbigene: 3938</p> + <p>uniprot: P09848</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000172456" fbc:label="ENSG00000172456" fbc:name="ENSG00000172456" metaid="_43cdde20-f842-41ff-9a7c-f23706c9478f"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000172456</p> + <p>hgnc.symbol: FGGY</p> + <p>ncbigene: 55277</p> + <p>uniprot: Q96C11</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000006534" fbc:label="ENSG00000006534" fbc:name="ENSG00000006534" metaid="e9d8a15a-9726-409a-aed9-cec6b317c4e6"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000006534</p> + <p>hgnc.symbol: ALDH3B1</p> + <p>ncbigene: 221</p> + <p>uniprot: P43353</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000116783" fbc:label="ENSG00000116783" fbc:name="ENSG00000116783" metaid="_73d80bcf-dfe5-4ec8-b501-98ebfc6d6067"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000116783</p> + <p>hgnc.symbol: TNNI3K</p> + <p>ncbigene: 51086</p> + <p>uniprot: Q59H18</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000169764" fbc:label="ENSG00000169764" fbc:name="ENSG00000169764" metaid="_948d2e18-a12b-4208-aaa3-127cb64223c2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000169764</p> + <p>hgnc.symbol: UGP2</p> + <p>ncbigene: 7360</p> + <p>uniprot: Q16851</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000140263" fbc:label="ENSG00000140263" fbc:name="ENSG00000140263" metaid="a50ba3ac-966e-434e-9674-e0c5f2e25b79"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000140263</p> + <p>hgnc.symbol: SORD</p> + <p>ncbigene: 6652</p> + <p>uniprot: Q00796</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000188167" fbc:label="ENSG00000188167" fbc:name="ENSG00000188167" metaid="_2490e5dd-19aa-47d5-a66a-9f660b0085d3"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000188167</p> + <p>hgnc.symbol: TMPPE</p> + <p>ncbigene: 643853</p> + <p>uniprot: Q6ZT21</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000177156" fbc:label="ENSG00000177156" fbc:name="ENSG00000177156" metaid="a63ba87e-11e6-4a4e-868b-ce7846566b64"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000177156</p> + <p>hgnc.symbol: TALDO1</p> + <p>ncbigene: 6888</p> + <p>uniprot: P37837</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000198074" fbc:label="ENSG00000198074" fbc:name="ENSG00000198074" metaid="_809d317a-4047-4e3d-b2f4-1386e3129360"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000198074</p> + <p>hgnc.symbol: AKR1B10</p> + <p>ncbigene: 57016</p> + <p>uniprot: O60218</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000176020" fbc:label="ENSG00000176020" fbc:name="ENSG00000176020" metaid="_513bae08-bdd4-4b97-98ae-07e801676dfe"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000176020</p> + <p>hgnc.symbol: AMIGO3</p> + <p>ncbigene: 386724</p> + <p>uniprot: Q86WK7</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000156510" fbc:label="ENSG00000156510" fbc:name="ENSG00000156510" metaid="_61c6553c-2336-4290-82a1-7d87591a8fd8"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000156510</p> + <p>hgnc.symbol: HKDC1</p> + <p>ncbigene: 80201</p> + <p>uniprot: Q2TB90</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000108479" fbc:label="ENSG00000108479" fbc:name="ENSG00000108479" metaid="aacb39b1-6ea5-4359-97fc-d8c44b24d923"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000108479</p> + <p>hgnc.symbol: GALK1</p> + <p>ncbigene: 2584</p> + <p>uniprot: P51570</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000171174" fbc:label="ENSG00000171174" fbc:name="ENSG00000171174" metaid="d405b7b0-3b31-4a66-97af-a85fa4a32ce6"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000171174</p> + <p>hgnc.symbol: RBKS</p> + <p>ncbigene: 64080</p> + <p>uniprot: Q9H477</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000259030" fbc:label="ENSG00000259030" fbc:name="ENSG00000259030" metaid="df89c41c-5769-4933-a26d-75489f2009cb"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000259030</p> + <p>hgnc.symbol: FPGT-TNNI3K</p> + <p>ncbigene: 100526835</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000078237" fbc:label="ENSG00000078237" fbc:name="ENSG00000078237" metaid="a9faff55-64a8-4038-b4b9-e85a053970f0"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000078237</p> + <p>hgnc.symbol: TIGAR</p> + <p>ncbigene: 57103</p> + <p>uniprot: Q9NQ88</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000171298" fbc:label="ENSG00000171298" fbc:name="ENSG00000171298" metaid="_510705a7-d23b-480a-bb95-8b9bcdcd3c9b"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000171298</p> + <p>hgnc.symbol: GAA</p> + <p>ncbigene: 2548</p> + <p>uniprot: P10253</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000117308" fbc:label="ENSG00000117308" fbc:name="ENSG00000117308" metaid="ecfe5f24-1fb3-4f45-8964-128b17595266"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000117308</p> + <p>hgnc.symbol: GALE</p> + <p>ncbigene: 2582</p> + <p>uniprot: Q14376</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000156958" fbc:label="ENSG00000156958" fbc:name="ENSG00000156958" metaid="_0ffa4e53-a04d-43a9-86a7-7017ab4b8bb0"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000156958</p> + <p>hgnc.symbol: GALK2</p> + <p>ncbigene: 2585</p> + <p>uniprot: Q01415</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000112699" fbc:label="ENSG00000112699" fbc:name="ENSG00000112699" metaid="_0d9ddbad-2dcb-402f-9849-c6ae59283884"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000112699</p> + <p>hgnc.symbol: GMDS</p> + <p>ncbigene: 2762</p> + <p>uniprot: O60547</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000156515" fbc:label="ENSG00000156515" fbc:name="ENSG00000156515" metaid="_1b7eb559-32a1-41f1-89ee-9ea63fc8ebb1"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000156515</p> + <p>hgnc.symbol: HK1</p> + <p>ncbigene: 3098</p> + <p>uniprot: P19367</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000130066" fbc:label="ENSG00000130066" fbc:name="ENSG00000130066" metaid="_21cc9685-34dc-4f6f-b332-e409179228f9"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000130066</p> + <p>hgnc.symbol: SAT1</p> + <p>ncbigene: 6303</p> + <p>uniprot: P21673</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000152556" fbc:label="ENSG00000152556" fbc:name="ENSG00000152556" metaid="_9978139a-2d36-41b2-8a16-ae119ad9c62a"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000152556</p> + <p>hgnc.symbol: PFKM</p> + <p>ncbigene: 5213</p> + <p>uniprot: P08237</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000178802" fbc:label="ENSG00000178802" fbc:name="ENSG00000178802" metaid="_4cd75726-c25f-4f11-b645-1f763ef8eb84"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000178802</p> + <p>hgnc.symbol: MPI</p> + <p>ncbigene: 4351</p> + <p>uniprot: P34949</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000158019" fbc:label="ENSG00000158019" fbc:name="ENSG00000158019" metaid="_538c0091-8464-47eb-91e1-646a853db46d"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000158019</p> + <p>hgnc.symbol: BABAM2</p> + <p>ncbigene: 9577</p> + <p>uniprot: Q9NXR7</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000140650" fbc:label="ENSG00000140650" fbc:name="ENSG00000140650" metaid="_1fe1abbd-efb3-45fd-aac2-755de9d9f7c8"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000140650</p> + <p>hgnc.symbol: PMM2</p> + <p>ncbigene: 5373</p> + <p>uniprot: O15305</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000166262" fbc:label="ENSG00000166262" fbc:name="ENSG00000166262" metaid="cfd467d1-528c-484b-8fda-084b7869c1f4"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000166262</p> + <p>hgnc.symbol: FAM227B</p> + <p>ncbigene: 196951</p> + <p>uniprot: Q96M60</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000169299" fbc:label="ENSG00000169299" fbc:name="ENSG00000169299" metaid="_629f4e87-2b63-44ab-beb3-af1d667022ad"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000169299</p> + <p>hgnc.symbol: PGM2</p> + <p>ncbigene: 55276</p> + <p>uniprot: Q96G03</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000158571" fbc:label="ENSG00000158571" fbc:name="ENSG00000158571" metaid="_4c698159-e0c6-4eed-b154-53776218f614"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000158571</p> + <p>hgnc.symbol: PFKFB1</p> + <p>ncbigene: 5207</p> + <p>uniprot: P16118</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000160883" fbc:label="ENSG00000160883" fbc:name="ENSG00000160883" metaid="a2ac8838-366b-48b0-80e3-3274be26154e"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000160883</p> + <p>hgnc.symbol: HK3</p> + <p>ncbigene: 3101</p> + <p>uniprot: P52790</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000141504" fbc:label="ENSG00000141504" fbc:name="ENSG00000141504" metaid="_54737a26-c3ba-47f6-9e01-83c9eba83079"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000141504</p> + <p>hgnc.symbol: SAT2</p> + <p>ncbigene: 112483</p> + <p>uniprot: Q96F10</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000257335" fbc:label="ENSG00000257335" fbc:name="ENSG00000257335" metaid="_2f618266-9c9a-4c56-a73a-97dc9c6829b2"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000257335</p> + <p>hgnc.symbol: MGAM</p> + <p>ncbigene: 8972</p> + <p>uniprot: O43451</p> + </body> + </notes> + </fbc:geneProduct> + <fbc:geneProduct fbc:id="ENSG00000180953" fbc:label="ENSG00000180953" fbc:name="ENSG00000180953" metaid="_125ff8ee-12ec-4eef-8955-07983faac86b"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>ensembl: ENSG00000180953</p> + <p>hgnc.symbol: ST20</p> + <p>uniprot: Q9HBF5</p> + </body> + </notes> + </fbc:geneProduct> + </fbc:listOfGeneProducts> + <groups:listOfGroups> + <groups:group groups:id="group102" groups:kind="classification" groups:name="Pentose phosphate pathway"> + <groups:listOfMembers> + <groups:member groups:idRef="R_HMR_4710"/> + <groups:member groups:idRef="R_RPEc"/> + <groups:member groups:idRef="R_PGLc"/> + <groups:member groups:idRef="R_GLYPHEHYc"/> + <groups:member groups:idRef="R_GNDc"/> + <groups:member groups:idRef="R_ABTD1"/> + <groups:member groups:idRef="R_HMR_4565"/> + <groups:member groups:idRef="R_HMR_9799"/> + <groups:member groups:idRef="R_HMR_4841"/> + <groups:member groups:idRef="R_HMR_4501"/> + <groups:member groups:idRef="R_HMR_4567"/> + <groups:member groups:idRef="R_HMR_4304"/> + <groups:member groups:idRef="R_HMR_4568"/> + <groups:member groups:idRef="R_HMR_4623"/> + <groups:member groups:idRef="R_HMR_4404"/> + <groups:member groups:idRef="R_HMR_4306"/> + <groups:member groups:idRef="R_HMR_4625"/> + <groups:member groups:idRef="R_G6PDH2c"/> + <groups:member groups:idRef="R_HMR_8074"/> + <groups:member groups:idRef="R_HMR_4052"/> + <groups:member groups:idRef="R_HMR_4350"/> + <groups:member groups:idRef="R_HMR_8653"/> + <groups:member groups:idRef="R_HMR_4351"/> + <groups:member groups:idRef="R_HMR_4352"/> + <groups:member groups:idRef="R_HMR_4473"/> + <groups:member groups:idRef="R_HMR_4474"/> + <groups:member groups:idRef="R_HMR_9800"/> + <groups:member groups:idRef="R_HMR_4354"/> + <groups:member groups:idRef="R_HMR_4398"/> + <groups:member groups:idRef="R_HMR_4476"/> + <groups:member groups:idRef="R_HMR_4477"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="group66" groups:kind="classification" groups:name="Galactose metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_HMR_4775"/> + <groups:member groups:idRef="R_HMR_4303"/> + <groups:member groups:idRef="R_HMR_4831"/> + <groups:member groups:idRef="R_HMR_4128"/> + <groups:member groups:idRef="R_HMR_4414"/> + <groups:member groups:idRef="R_HMR_4832"/> + <groups:member groups:idRef="R_HMR_4415"/> + <groups:member groups:idRef="R_HMR_4416"/> + <groups:member groups:idRef="R_HMR_3944"/> + <groups:member groups:idRef="R_FBA5"/> + <groups:member groups:idRef="R_HMR_8762"/> + <groups:member groups:idRef="R_HMR_4130"/> + <groups:member groups:idRef="R_KHK3"/> + <groups:member groups:idRef="R_HMR_4131"/> + <groups:member groups:idRef="R_HMR_7674"/> + <groups:member groups:idRef="R_HMR_4132"/> + <groups:member groups:idRef="R_HMR_8761"/> + <groups:member groups:idRef="R_HMR_8766"/> + <groups:member groups:idRef="R_HMR_8767"/> + <groups:member groups:idRef="R_HMR_8764"/> + <groups:member groups:idRef="R_HMR_4774"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="group65" groups:kind="classification" groups:name="Fructose and mannose metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_HMR_4401"/> + <groups:member groups:idRef="R_RE1342C"/> + <groups:member groups:idRef="R_HMR_4402"/> + <groups:member groups:idRef="R_HMR_4315"/> + <groups:member groups:idRef="R_HMR_4403"/> + <groups:member groups:idRef="R_HMR_8768"/> + <groups:member groups:idRef="R_HMR_4316"/> + <groups:member groups:idRef="R_HMR_4317"/> + <groups:member groups:idRef="R_HMR_4318"/> + <groups:member groups:idRef="R_HMR_4319"/> + <groups:member groups:idRef="R_HMR_4706"/> + <groups:member groups:idRef="R_HMR_4490"/> + <groups:member groups:idRef="R_HMR_4383"/> + <groups:member groups:idRef="R_HMR_4297"/> + <groups:member groups:idRef="R_HMR_4385"/> + <groups:member groups:idRef="R_HMR_0454"/> + <groups:member groups:idRef="R_HMR_4320"/> + <groups:member groups:idRef="R_HMR_4386"/> + <groups:member groups:idRef="R_HMR_4310"/> + <groups:member groups:idRef="R_HMR_4387"/> + <groups:member groups:idRef="R_HMR_4399"/> + <groups:member groups:idRef="R_HMR_4356"/> + <groups:member groups:idRef="R_HMR_4400"/> + </groups:listOfMembers> + </groups:group> + </groups:listOfGroups> + <listOfUnitDefinitions> + <unitDefinition id="mmol_per_gDW_per_hr" name="mmol_per_gDW_per_hr"> + <listOfUnits> + <unit exponent="-1" kind="gram" multiplier="1" scale="0"/> + <unit exponent="1" kind="mole" multiplier="1" scale="-3"/> + <unit exponent="-1" kind="second" multiplier="3600" scale="0"/> + </listOfUnits> + </unitDefinition> + </listOfUnitDefinitions> + <listOfCompartments> + <compartment constant="true" id="r" metaid="_884904cc-79eb-427d-b91b-3858ebf3f596" name="Endoplasmic reticulum" sboTerm="SBO:0000290" spatialDimensions="3"/> + <compartment constant="true" id="s" metaid="c2091cbb-7712-4d49-8306-2c20463fde5c" name="Extracellular" sboTerm="SBO:0000290" spatialDimensions="3"/> + <compartment constant="true" id="c" metaid="_9e846238-9a89-4c76-93c0-2ad9f62b3f5f" name="Cytosol" sboTerm="SBO:0000290" spatialDimensions="3"/> + <compartment constant="true" id="l" metaid="_1eae95e5-962a-462b-b3af-730aa2c62bf8" name="Lysosome" sboTerm="SBO:0000290" spatialDimensions="3"/> + <compartment constant="true" id="g" metaid="a36d7b30-c3c7-46e7-91bc-11d957f9efde" name="Golgi apparatus" sboTerm="SBO:0000290" spatialDimensions="3"/> + </listOfCompartments> + <listOfSpecies> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2" hasOnlySubstanceUnits="true" id="M_m02553c" initialConcentration="0" metaid="cdf46bb5-653c-4e4c-bf33-28c9d8abecaa" name="NADH" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00004</p> + <p>hmdb: HMDB01487</p> + <p>bigg.metabolite: nadh</p> + <p>chebi: CHEBI:16908</p> + <p>pubchem.compound: 928</p> + <p>metanetx.chemical: MNXM10</p> + <p>formula: C21H27N7O14P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cdf46bb5-653c-4e4c-bf33-28c9d8abecaa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00004"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01487"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadh"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16908"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/928"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H21N5O15P2" hasOnlySubstanceUnits="true" id="M_m01949c" initialConcentration="0" metaid="e5ead912-a5af-4eae-a2ca-54c38ddb04ab" name="GDP-4-dehydro-6-deoxy-D-mannose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01222</p> + <p>bigg.metabolite: gdpddman</p> + <p>chebi: CHEBI:16955</p> + <p>pubchem.compound: 439446</p> + <p>metanetx.chemical: MNXM516</p> + <p>formula: C16H21N5O15P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e5ead912-a5af-4eae-a2ca-54c38ddb04ab"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01222"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gdpddman"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16955"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439446"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM516"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_tag1p_D_c" initialConcentration="0" metaid="c7984b99-3c59-482c-a42b-699b4ec0058c" name="D-Tagatose 1-Phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>bigg.metabolite: tag1p__D</p> + <p>pubchem.compound: 6101730</p> + <p>metanetx.chemical: MNXM11293</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c7984b99-3c59-482c-a42b-699b4ec0058c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/tag1p__D"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6101730"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM11293"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H14N2O3" hasOnlySubstanceUnits="true" id="M_glyphe_c" initialConcentration="0" metaid="_6fc683df-22a4-460b-bfae-8fbe15701927" name="Glycyl-Phenylalanine" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>hmdb: HMDB0028848</p> + <p>bigg.metabolite: glyphe</p> + <p>inchi: InChI=1S/C11H14N2O3/c12-7-10(14)13-9(11(15)16)6-8-4-2-1-3-5-8/h1-5,9H,6-7,12H2,(H,13,14)(H,15,16)</p> + <p>metanetx.chemical: MNXM8669</p> + <p>formula: C11H14N2O3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6fc683df-22a4-460b-bfae-8fbe15701927"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB0028848"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glyphe"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C11H14N2O3/c12-7-10(14)13-9(11(15)16)6-8-4-2-1-3-5-8/h1-5,9H,6-7,12H2,(H,13,14)(H,15,16)"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM8669"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01965c" initialConcentration="0" metaid="_94c2bee0-9d72-498c-ac24-cfc89072b989" name="glucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00031</p> + <p>hmdb: HMDB00122</p> + <p>bigg.metabolite: glc__D</p> + <p>chebi: CHEBI:4167</p> + <p>pubchem.compound: 5793</p> + <p>metanetx.chemical: MNXM41 || MNXM99</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94c2bee0-9d72-498c-ac24-cfc89072b989"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM41"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM99"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_m02945s" initialConcentration="0" metaid="a013605d-e919-4407-ac07-58f2fa04eec0" name="sucrose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00089</p> + <p>hmdb: HMDB00258</p> + <p>bigg.metabolite: sucr</p> + <p>chebi: CHEBI:17992</p> + <p>pubchem.compound: 5988</p> + <p>metanetx.chemical: MNXM167</p> + <p>formula: C12H22O11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a013605d-e919-4407-ac07-58f2fa04eec0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00089"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00258"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/sucr"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17992"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5988"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM167"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01844c" initialConcentration="0" metaid="c12fb463-a912-4ae2-a619-e6e7123535ff" name="fructose-3-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01965g" initialConcentration="0" metaid="c3ec1b4f-c423-4fb7-ba05-e21ba291103b" name="glucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00031</p> + <p>hmdb: HMDB00122</p> + <p>bigg.metabolite: glc__D</p> + <p>chebi: CHEBI:4167</p> + <p>pubchem.compound: 5793</p> + <p>metanetx.chemical: MNXM41 || MNXM99</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c3ec1b4f-c423-4fb7-ba05-e21ba291103b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM41"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM99"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14O7" hasOnlySubstanceUnits="true" id="M_m03165c" initialConcentration="0" metaid="_7fccf573-a7f5-4aeb-823a-e1049fe4b5c1" name="sedoheptulose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C02076</p> + <p>chebi: CHEBI:16802</p> + <p>metanetx.chemical: MNXM44065</p> + <p>formula: C7H14O7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7fccf573-a7f5-4aeb-823a-e1049fe4b5c1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02076"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16802"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM44065"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O10P2" hasOnlySubstanceUnits="true" id="M_m01285c" initialConcentration="0" metaid="_521f7ad8-f72e-4338-a6f2-c0a842e7122b" name="ADP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00008</p> + <p>hmdb: HMDB01341</p> + <p>bigg.metabolite: adp</p> + <p>chebi: CHEBI:16761</p> + <p>pubchem.compound: 6022</p> + <p>metanetx.chemical: MNXM7</p> + <p>formula: C10H12N5O10P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_521f7ad8-f72e-4338-a6f2-c0a842e7122b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00008"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01341"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/adp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16761"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6022"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3" hasOnlySubstanceUnits="true" id="M_m01981c" initialConcentration="0" metaid="_28c079d9-0897-4cc1-ac53-057881862cfb" name="glyceraldehyde" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C02154</p> + <p>hmdb: HMDB01051</p> + <p>bigg.metabolite: glyald</p> + <p>chebi: CHEBI:5445</p> + <p>inchi: InChI=1S/C3H6O3/c4-1-3(6)2-5/h1,3,5-6H,2H2/t3-/m0/s1</p> + <p>pubchem.compound: 751</p> + <p>metanetx.chemical: MNXM435</p> + <p>formula: C3H6O3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28c079d9-0897-4cc1-ac53-057881862cfb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02154"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01051"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glyald"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:5445"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C3H6O3/c4-1-3(6)2-5/h1,3,5-6H,2H2/t3-/m0/s1"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/751"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM435"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O6" hasOnlySubstanceUnits="true" id="M_m01682c" initialConcentration="0" metaid="ae904b43-59ad-4e95-88e1-8e34700a9056" name="D-glucitol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00794</p> + <p>hmdb: HMDB00247</p> + <p>bigg.metabolite: sbt__D</p> + <p>chebi: CHEBI:17924</p> + <p>pubchem.compound: 5780</p> + <p>metanetx.chemical: MNXM469</p> + <p>formula: C6H14O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae904b43-59ad-4e95-88e1-8e34700a9056"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00794"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00247"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/sbt__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17924"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5780"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM469"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H13O9P" hasOnlySubstanceUnits="true" id="M_m02917c" initialConcentration="0" metaid="_42c68707-b6eb-4d18-8cc4-456bd62297d4" name="sorbitol-3-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>pubchem.compound: 129544</p> + <p>metanetx.chemical: MNXM48480</p> + <p>formula: C6H13O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_42c68707-b6eb-4d18-8cc4-456bd62297d4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/129544"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM48480"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040l" initialConcentration="0" metaid="eb95a981-8590-48ef-b0b9-b05c3507c687" name="H2O" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>lipidmaps: LMST01040128</p> + <p>kegg.compound: C00001</p> + <p>hmdb: HMDB02111</p> + <p>bigg.metabolite: h2o</p> + <p>chebi: CHEBI:15377</p> + <p>pubchem.compound: 962</p> + <p>metanetx.chemical: MNXM2</p> + <p>formula: H2O</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eb95a981-8590-48ef-b0b9-b05c3507c687"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2" hasOnlySubstanceUnits="true" id="M_m02553r" initialConcentration="0" metaid="a2069c73-802b-49cf-8f06-0e3f0be5669b" name="NADH" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00004</p> + <p>hmdb: HMDB01487</p> + <p>bigg.metabolite: nadh</p> + <p>chebi: CHEBI:16908</p> + <p>pubchem.compound: 928</p> + <p>metanetx.chemical: MNXM10</p> + <p>formula: C21H27N7O14P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a2069c73-802b-49cf-8f06-0e3f0be5669b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00004"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01487"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadh"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16908"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/928"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01965l" initialConcentration="0" metaid="_25dd65f2-2228-440c-baf3-9f621a7e5ff0" name="glucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00031</p> + <p>hmdb: HMDB00122</p> + <p>bigg.metabolite: glc__D</p> + <p>chebi: CHEBI:4167</p> + <p>pubchem.compound: 5793</p> + <p>metanetx.chemical: MNXM41 || MNXM99</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_25dd65f2-2228-440c-baf3-9f621a7e5ff0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM41"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM99"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="-2" fbc:chemicalFormula="C21H27N7O14P2" hasOnlySubstanceUnits="true" id="M_m02553s" initialConcentration="0" metaid="c0b50a6c-29cd-4c06-82af-9fce71d23255" name="NADH" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00004</p> + <p>hmdb: HMDB01487</p> + <p>bigg.metabolite: nadh</p> + <p>chebi: CHEBI:16908</p> + <p>pubchem.compound: 928</p> + <p>metanetx.chemical: MNXM10</p> + <p>formula: C21H27N7O14P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c0b50a6c-29cd-4c06-82af-9fce71d23255"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00004"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01487"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadh"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16908"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/928"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01965s" initialConcentration="0" metaid="ad2dbd72-4542-4c0b-8986-e308b158e31f" name="glucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00031</p> + <p>hmdb: HMDB00122</p> + <p>bigg.metabolite: glc__D</p> + <p>chebi: CHEBI:4167</p> + <p>pubchem.compound: 5793</p> + <p>metanetx.chemical: MNXM41 || MNXM99</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ad2dbd72-4542-4c0b-8986-e308b158e31f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00031"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00122"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glc__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4167"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5793"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM41"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM99"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H18O8" hasOnlySubstanceUnits="true" id="M_m01913s" initialConcentration="0" metaid="ae24b707-1474-48c9-bc3e-184c9fc59f80" name="galactosylglycerol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C05401</p> + <p>chebi: CHEBI:15754</p> + <p>pubchem.compound: 16048618</p> + <p>metanetx.chemical: MNXM2608</p> + <p>formula: C9H18O8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae24b707-1474-48c9-bc3e-184c9fc59f80"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C05401"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15754"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/16048618"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2608"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040c" initialConcentration="0" metaid="dce3ae33-5567-405a-9fd7-b571c4dce0b0" name="H2O" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>lipidmaps: LMST01040128</p> + <p>kegg.compound: C00001</p> + <p>hmdb: HMDB02111</p> + <p>bigg.metabolite: h2o</p> + <p>chebi: CHEBI:15377</p> + <p>pubchem.compound: 962</p> + <p>metanetx.chemical: MNXM2</p> + <p>formula: H2O</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dce3ae33-5567-405a-9fd7-b571c4dce0b0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H11N4O11P2" hasOnlySubstanceUnits="true" id="M_m02161c" initialConcentration="0" metaid="_6588a61e-6e8e-4abf-b113-5c7d7bd46a74" name="IDP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00104</p> + <p>bigg.metabolite: idp</p> + <p>chebi: CHEBI:17808</p> + <p>pubchem.compound: 6831</p> + <p>metanetx.chemical: MNXM495</p> + <p>formula: C10H11N4O11P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6588a61e-6e8e-4abf-b113-5c7d7bd46a74"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00104"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/idp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17808"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6831"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM495"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2" hasOnlySubstanceUnits="true" id="M_m02552c" initialConcentration="0" metaid="c7546c47-b436-4f42-b25c-6a7ba5aae2db" name="NAD+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00003</p> + <p>hmdb: HMDB00902</p> + <p>bigg.metabolite: nad</p> + <p>chebi: CHEBI:15846</p> + <p>pubchem.compound: 5893</p> + <p>metanetx.chemical: MNXM8</p> + <p>formula: C21H26N7O14P2</p> + <p>charge: -1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c7546c47-b436-4f42-b25c-6a7ba5aae2db"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00003"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00902"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nad"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15846"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5893"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C10H12N5O11P2" hasOnlySubstanceUnits="true" id="M_m01948c" initialConcentration="0" metaid="a0bbd11c-f5e5-4615-aa55-824abf6e90cf" name="GDP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00035</p> + <p>hmdb: HMDB01201</p> + <p>bigg.metabolite: gdp</p> + <p>chebi: CHEBI:17552</p> + <p>pubchem.compound: 8977</p> + <p>metanetx.chemical: MNXM30</p> + <p>formula: C10H12N5O11P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a0bbd11c-f5e5-4615-aa55-824abf6e90cf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00035"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01201"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gdp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17552"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/8977"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m02455c" initialConcentration="0" metaid="_45e1757e-5e64-4141-add5-c15cc95139e6" name="mannose-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00275</p> + <p>bigg.metabolite: man6p</p> + <p>chebi: CHEBI:17369</p> + <p>pubchem.compound: 65127</p> + <p>metanetx.chemical: MNXM427</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_45e1757e-5e64-4141-add5-c15cc95139e6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00275"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/man6p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17369"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/65127"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM427"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H20O11" hasOnlySubstanceUnits="true" id="M_m00812s" initialConcentration="0" metaid="_00ff2bbd-493a-4113-b2e9-db7ee06461c7" name="3-ketolactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C05403</p> + <p>metanetx.chemical: MNXM36578</p> + <p>formula: C12H20O11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00ff2bbd-493a-4113-b2e9-db7ee06461c7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C05403"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM36578"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01746c" initialConcentration="0" metaid="_649c6e13-719a-4c6a-816c-e44a17666513" name="D-tagatose-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01097</p> + <p>bigg.metabolite: tag1p__D</p> + <p>chebi: CHEBI:4251</p> + <p>pubchem.compound: 439396</p> + <p>metanetx.chemical: MNXM795 || MNXM164716</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_649c6e13-719a-4c6a-816c-e44a17666513"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01097"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/tag1p__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4251"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439396"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM795"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM164716"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O12P2" hasOnlySubstanceUnits="true" id="M_m01843c" initialConcentration="0" metaid="fd1b4759-172c-46ec-a6af-449961360664" name="fructose-2,6-bisphosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00665</p> + <p>bigg.metabolite: f26bp</p> + <p>chebi: CHEBI:28602</p> + <p>pubchem.compound: 105021</p> + <p>metanetx.chemical: MNXM651</p> + <p>formula: C6H10O12P2</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fd1b4759-172c-46ec-a6af-449961360664"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00665"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/f26bp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28602"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/105021"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM651"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O13P3" hasOnlySubstanceUnits="true" id="M_m01371c" initialConcentration="0" metaid="_7c99bce2-d604-4273-9c90-72c3d53e303d" name="ATP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00002</p> + <p>hmdb: HMDB00538</p> + <p>bigg.metabolite: atp</p> + <p>chebi: CHEBI:15422</p> + <p>pubchem.compound: 5957</p> + <p>metanetx.chemical: MNXM3</p> + <p>formula: C10H12N5O13P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7c99bce2-d604-4273-9c90-72c3d53e303d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00002"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00538"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/atp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15422"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5957"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2" hasOnlySubstanceUnits="true" id="M_m01596c" initialConcentration="0" metaid="_24121835-f370-42a9-89c1-f78191770ba5" name="CO2" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00011</p> + <p>hmdb: HMDB01967</p> + <p>bigg.metabolite: co2</p> + <p>chebi: CHEBI:16526</p> + <p>inchi: InChI=1S/CO2/c2-1-3</p> + <p>pubchem.compound: 280</p> + <p>metanetx.chemical: MNXM13</p> + <p>formula: CO2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24121835-f370-42a9-89c1-f78191770ba5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00011"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01967"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/co2"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16526"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/CO2/c2-1-3"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/280"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2" hasOnlySubstanceUnits="true" id="M_m02552s" initialConcentration="0" metaid="_81c63c25-41ec-418f-a7ae-8917ef8e605f" name="NAD+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00003</p> + <p>hmdb: HMDB00902</p> + <p>bigg.metabolite: nad</p> + <p>chebi: CHEBI:15846</p> + <p>pubchem.compound: 5893</p> + <p>metanetx.chemical: MNXM8</p> + <p>formula: C21H26N7O14P2</p> + <p>charge: -1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_81c63c25-41ec-418f-a7ae-8917ef8e605f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00003"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00902"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nad"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15846"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5893"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C15H22N2O17P2" hasOnlySubstanceUnits="true" id="M_m03108c" initialConcentration="0" metaid="_59be01c8-ef39-4d12-ba62-dae2abc178b3" name="UDP-glucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00029</p> + <p>bigg.metabolite: udpg</p> + <p>chebi: CHEBI:18066</p> + <p>pubchem.compound: 53477679</p> + <p>metanetx.chemical: MNXM52</p> + <p>formula: C15H22N2O17P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_59be01c8-ef39-4d12-ba62-dae2abc178b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00029"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udpg"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18066"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/53477679"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM52"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-1" fbc:chemicalFormula="C21H26N7O14P2" hasOnlySubstanceUnits="true" id="M_m02552r" initialConcentration="0" metaid="_97a217ca-280a-4b3d-a2b8-ef92ea5df65e" name="NAD+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00003</p> + <p>hmdb: HMDB00902</p> + <p>bigg.metabolite: nad</p> + <p>chebi: CHEBI:15846</p> + <p>pubchem.compound: 5893</p> + <p>metanetx.chemical: MNXM8</p> + <p>formula: C21H26N7O14P2</p> + <p>charge: -1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97a217ca-280a-4b3d-a2b8-ef92ea5df65e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00003"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00902"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nad"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15846"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5893"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H12N3O11P2" hasOnlySubstanceUnits="true" id="M_m01424c" initialConcentration="0" metaid="_430a23d5-3b46-409f-8228-66cb698937a6" name="CDP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00112</p> + <p>bigg.metabolite: cdp</p> + <p>chebi: CHEBI:17239</p> + <p>pubchem.compound: 6132</p> + <p>metanetx.chemical: MNXM220</p> + <p>formula: C9H12N3O11P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_430a23d5-3b46-409f-8228-66cb698937a6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00112"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/cdp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17239"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6132"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM220"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2" hasOnlySubstanceUnits="true" id="M_m01596r" initialConcentration="0" metaid="_11e6d111-bf70-414d-9f90-152505ad9772" name="CO2" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00011</p> + <p>hmdb: HMDB01967</p> + <p>bigg.metabolite: co2</p> + <p>chebi: CHEBI:16526</p> + <p>inchi: InChI=1S/CO2/c2-1-3</p> + <p>pubchem.compound: 280</p> + <p>metanetx.chemical: MNXM13</p> + <p>formula: CO2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_11e6d111-bf70-414d-9f90-152505ad9772"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00011"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01967"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/co2"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16526"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/CO2/c2-1-3"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/280"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O6" hasOnlySubstanceUnits="true" id="M_m01909c" initialConcentration="0" metaid="_32fccb2f-e504-4de0-be7b-32b6e5e909af" name="galactitol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01697</p> + <p>hmdb: HMDB00107</p> + <p>bigg.metabolite: galt</p> + <p>chebi: CHEBI:16813</p> + <p>inchi: InChI=1S/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2/t3-,4+,5+,6-</p> + <p>pubchem.compound: 11850</p> + <p>metanetx.chemical: MNXM1233</p> + <p>formula: C6H14O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_32fccb2f-e504-4de0-be7b-32b6e5e909af"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01697"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00107"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/galt"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16813"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2/t3-,4+,5+,6-"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/11850"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1233"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m02454c" initialConcentration="0" metaid="a9ce0266-f645-439d-b18d-d18a8b0913d4" name="mannose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00636</p> + <p>hmdb: HMDB06330</p> + <p>bigg.metabolite: man1p</p> + <p>chebi: CHEBI:35374</p> + <p>pubchem.compound: 644175</p> + <p>metanetx.chemical: MNXM721</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a9ce0266-f645-439d-b18d-d18a8b0913d4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00636"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB06330"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/man1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:35374"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/644175"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM721"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H12O5" hasOnlySubstanceUnits="true" id="M_abt_D_c" initialConcentration="0" metaid="_26494228-cd48-4a29-af7c-1b74871615b2" name="D-Arabitol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>bigg.metabolite: abt__D</p> + <p>inchi: InChI=1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4-/m1/s1</p> + <p>metanetx.chemical: MNXM1018</p> + <p>formula: C5H12O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_26494228-cd48-4a29-af7c-1b74871615b2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/abt__D"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C5H12O5/c6-1-3(8)5(10)4(9)2-7/h3-10H,1-2H2/t3-,4-/m1/s1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1018"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O12P2" hasOnlySubstanceUnits="true" id="M_m01717c" initialConcentration="0" metaid="_2615d46c-444b-4efb-8351-a5365965023d" name="D-mannose-1,6-bisphosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C03693</p> + <p>pubchem.compound: 3036654</p> + <p>metanetx.chemical: MNXM48557</p> + <p>formula: C6H10O12P2</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2615d46c-444b-4efb-8351-a5365965023d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C03693"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/3036654"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM48557"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H12N5O14P3" hasOnlySubstanceUnits="true" id="M_m02034c" initialConcentration="0" metaid="_949f82be-8e6d-4143-98fb-13e8a920d815" name="GTP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00044</p> + <p>hmdb: HMDB01273</p> + <p>bigg.metabolite: gtp</p> + <p>chebi: CHEBI:15996</p> + <p>pubchem.compound: 6830</p> + <p>metanetx.chemical: MNXM51</p> + <p>formula: C10H12N5O14P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_949f82be-8e6d-4143-98fb-13e8a920d815"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00044"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01273"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gtp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15996"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6830"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01911c" initialConcentration="0" metaid="_71807f0a-77fc-4a83-83ec-587af94cb10d" name="galactose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C03384</p> + <p>metanetx.chemical: MNXM336</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_71807f0a-77fc-4a83-83ec-587af94cb10d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C03384"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM336"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01745c" initialConcentration="0" metaid="a276d8cf-f71a-4d12-bd23-bd4bf3944d06" name="D-tagatose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00795</p> + <p>hmdb: HMDB03418</p> + <p>bigg.metabolite: tag__D</p> + <p>chebi: CHEBI:47693</p> + <p>pubchem.compound: 92092</p> + <p>metanetx.chemical: MNXM92401</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a276d8cf-f71a-4d12-bd23-bd4bf3944d06"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00795"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB03418"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/tag__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:47693"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/92092"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM92401"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01842c" initialConcentration="0" metaid="_5c5c742d-cd6a-48ff-87bb-0027c8b6eefe" name="fructose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01094</p> + <p>bigg.metabolite: f1p</p> + <p>chebi: CHEBI:18105</p> + <p>pubchem.compound: 10400369</p> + <p>metanetx.chemical: MNXM145568</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5c5c742d-cd6a-48ff-87bb-0027c8b6eefe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01094"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/f1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18105"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/10400369"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM145568"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H23N5O16P2" hasOnlySubstanceUnits="true" id="M_m01951c" initialConcentration="0" metaid="e11e80c6-cd80-4ea3-96ca-05f1b24ed09b" name="GDP-mannose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00096</p> + <p>bigg.metabolite: gdpmann</p> + <p>chebi: CHEBI:15820</p> + <p>pubchem.compound: 18396</p> + <p>metanetx.chemical: MNXM82</p> + <p>formula: C16H23N5O16P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e11e80c6-cd80-4ea3-96ca-05f1b24ed09b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00096"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gdpmann"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15820"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/18396"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM82"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02846c" initialConcentration="0" metaid="f88cd838-6cfd-4de1-80dd-47d8a4a5ec8c" name="ribulose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00199</p> + <p>bigg.metabolite: ru5p__D</p> + <p>chebi: CHEBI:17363</p> + <p>pubchem.compound: 439184</p> + <p>metanetx.chemical: MNXM145 || MNXM186</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f88cd838-6cfd-4de1-80dd-47d8a4a5ec8c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00199"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/ru5p__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17363"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439184"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM145"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM186"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C4H7O7P" hasOnlySubstanceUnits="true" id="M_m01785c" initialConcentration="0" metaid="_81dee1de-9ff0-4d2b-8f6f-99cf059accdf" name="erythrose-4-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00279</p> + <p>bigg.metabolite: e4p</p> + <p>chebi: CHEBI:48153</p> + <p>pubchem.compound: 122357</p> + <p>metanetx.chemical: MNXM258</p> + <p>formula: C4H7O7P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_81dee1de-9ff0-4d2b-8f6f-99cf059accdf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00279"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/e4p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:48153"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/122357"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM258"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m01761c" initialConcentration="0" metaid="e6b875ce-6d49-4f17-bac7-17eeb57f18fa" name="D-xylulose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00231</p> + <p>bigg.metabolite: xu5p__D</p> + <p>chebi: CHEBI:16332</p> + <p>pubchem.compound: 439190</p> + <p>metanetx.chemical: MNXM186</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e6b875ce-6d49-4f17-bac7-17eeb57f18fa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00231"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/xu5p__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16332"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439190"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM186"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-5" fbc:chemicalFormula="C5H8O14P3" hasOnlySubstanceUnits="true" id="M_m02806c" initialConcentration="0" metaid="_1c326a8e-e821-4f60-b8b0-51d295a2d118" name="PRPP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00119</p> + <p>bigg.metabolite: prpp</p> + <p>chebi: CHEBI:17111</p> + <p>pubchem.compound: 7339</p> + <p>metanetx.chemical: MNXM91</p> + <p>formula: C5H8O14P3</p> + <p>charge: -5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1c326a8e-e821-4f60-b8b0-51d295a2d118"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00119"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/prpp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17111"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/7339"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM91"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O7P" hasOnlySubstanceUnits="true" id="M_m00639c" initialConcentration="0" metaid="_669cde35-0c63-4dca-9a0d-3b24adb00ab7" name="2-deoxy-D-ribose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00672</p> + <p>bigg.metabolite: 2dr1p</p> + <p>chebi: CHEBI:28542</p> + <p>pubchem.compound: 5460448</p> + <p>metanetx.chemical: MNXM789</p> + <p>formula: C5H9O7P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_669cde35-0c63-4dca-9a0d-3b24adb00ab7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00672"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/2dr1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28542"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5460448"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM789"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C15H22N2O17P2" hasOnlySubstanceUnits="true" id="M_m03107c" initialConcentration="0" metaid="_13becef8-df25-45f6-b797-6efd47ae03e2" name="UDP-galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00052</p> + <p>hmdb: HMDB00302</p> + <p>bigg.metabolite: udpgal</p> + <p>chebi: CHEBI:67119</p> + <p>pubchem.compound: 18068</p> + <p>metanetx.chemical: MNXM89795</p> + <p>formula: C15H22N2O17P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_13becef8-df25-45f6-b797-6efd47ae03e2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00052"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00302"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udpgal"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:67119"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/18068"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89795"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C6H10O12P2" hasOnlySubstanceUnits="true" id="M_m02955c" initialConcentration="0" metaid="_8cb2adcf-2881-4f20-8029-273b42f851bb" name="tagatose-1,6-bisphosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C03785</p> + <p>chebi: CHEBI:4250</p> + <p>pubchem.compound: 440117</p> + <p>metanetx.chemical: MNXM1324 || MNXM164715</p> + <p>formula: C6H10O12P2</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8cb2adcf-2881-4f20-8029-273b42f851bb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C03785"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4250"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/440117"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1324"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM164715"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="-2" fbc:chemicalFormula="C15H22N2O17P2" hasOnlySubstanceUnits="true" id="M_m03107g" initialConcentration="0" metaid="def6fe8a-f42f-410d-9563-fee60d2fb154" name="UDP-galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00052</p> + <p>hmdb: HMDB00302</p> + <p>bigg.metabolite: udpgal</p> + <p>chebi: CHEBI:67119</p> + <p>pubchem.compound: 18068</p> + <p>metanetx.chemical: MNXM89795</p> + <p>formula: C15H22N2O17P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#def6fe8a-f42f-410d-9563-fee60d2fb154"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00052"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00302"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udpgal"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:67119"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/18068"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89795"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02846r" initialConcentration="0" metaid="_627f203c-3273-472d-98be-2227cb9aa716" name="ribulose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00199</p> + <p>bigg.metabolite: ru5p__D</p> + <p>chebi: CHEBI:17363</p> + <p>pubchem.compound: 439184</p> + <p>metanetx.chemical: MNXM145 || MNXM186</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_627f203c-3273-472d-98be-2227cb9aa716"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00199"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/ru5p__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17363"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439184"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM145"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM186"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_m02373c" initialConcentration="0" metaid="_6b685091-21fd-4e43-8051-0606e34176e9" name="L-fuculose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01721</p> + <p>chebi: CHEBI:17617</p> + <p>pubchem.compound: 6857362</p> + <p>metanetx.chemical: MNXM1748</p> + <p>formula: C6H12O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6b685091-21fd-4e43-8051-0606e34176e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01721"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17617"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6857362"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1748"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m02453c" initialConcentration="0" metaid="_387d9eaf-8114-454d-9cbb-b68867f9fd37" name="mannose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00159</p> + <p>hmdb: HMDB00169</p> + <p>bigg.metabolite: man</p> + <p>chebi: CHEBI:4208</p> + <p>pubchem.compound: 18950</p> + <p>metanetx.chemical: MNXM182</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_387d9eaf-8114-454d-9cbb-b68867f9fd37"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00159"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00169"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/man"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4208"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/18950"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM182"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O6" hasOnlySubstanceUnits="true" id="M_m00810s" initialConcentration="0" metaid="_888b4b49-c5cf-4b3d-ae82-cbfdc5192782" name="3-keto-beta-D-galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C05394</p> + <p>chebi: CHEBI:27453</p> + <p>pubchem.compound: 440653</p> + <p>metanetx.chemical: MNXM4339</p> + <p>formula: C6H10O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_888b4b49-c5cf-4b3d-ae82-cbfdc5192782"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C05394"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:27453"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/440653"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM4339"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_m02425c" initialConcentration="0" metaid="_1ec20d61-01eb-4ae4-b50f-08dfa29f333c" name="L-xylulose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00312</p> + <p>hmdb: HMDB00751</p> + <p>bigg.metabolite: xylu__L</p> + <p>chebi: CHEBI:17399</p> + <p>inchi: InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2/t3-,5+/m0/s1</p> + <p>pubchem.compound: 22253</p> + <p>metanetx.chemical: MNXM597</p> + <p>formula: C5H10O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1ec20d61-01eb-4ae4-b50f-08dfa29f333c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00312"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00751"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/xylu__L"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17399"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C5H10O5/c6-1-3(8)5(10)4(9)2-7/h3,5-8,10H,1-2H2/t3-,5+/m0/s1"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22253"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM597"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01910c" initialConcentration="0" metaid="_74a87466-9b69-4cc8-9d29-8036f2c76d6a" name="galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00984</p> + <p>hmdb: HMDB00143</p> + <p>bigg.metabolite: gal</p> + <p>chebi: CHEBI:28061</p> + <p>pubchem.compound: 439357</p> + <p>metanetx.chemical: MNXM112 || MNXM390</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_74a87466-9b69-4cc8-9d29-8036f2c76d6a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00984"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00143"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gal"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28061"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439357"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM112"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM390"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO2" hasOnlySubstanceUnits="true" id="M_m02724c" initialConcentration="0" metaid="c4ed6ede-5c56-4346-acbd-7efd7f34b58b" name="phenylalanine" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00079</p> + <p>hmdb: HMDB00159</p> + <p>bigg.metabolite: phe__L</p> + <p>chebi: CHEBI:17295</p> + <p>pubchem.compound: 6140</p> + <p>metanetx.chemical: MNXM97</p> + <p>formula: C9H11NO2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c4ed6ede-5c56-4346-acbd-7efd7f34b58b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00079"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00159"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/phe__L"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17295"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6140"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM97"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02845c" initialConcentration="0" metaid="_7d86d6c1-f376-4349-a4ec-cc8fb8350868" name="ribose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00117</p> + <p>bigg.metabolite: r5p</p> + <p>chebi: CHEBI:17797</p> + <p>pubchem.compound: 440101</p> + <p>metanetx.chemical: MNXM116 || MNXM15900</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7d86d6c1-f376-4349-a4ec-cc8fb8350868"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00117"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/r5p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17797"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/440101"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM116"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM15900"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H12N3O14P3" hasOnlySubstanceUnits="true" id="M_m01623c" initialConcentration="0" metaid="b14f1569-0718-46ce-81e7-1b85790417ad" name="CTP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00063</p> + <p>bigg.metabolite: ctp</p> + <p>chebi: CHEBI:17677</p> + <p>pubchem.compound: 6176</p> + <p>metanetx.chemical: MNXM63</p> + <p>formula: C9H12N3O14P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b14f1569-0718-46ce-81e7-1b85790417ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00063"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/ctp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17677"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6176"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM63"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C16H23N5O15P2" hasOnlySubstanceUnits="true" id="M_m01950c" initialConcentration="0" metaid="_945a262e-c045-4dfe-a70d-e948ad2a61ff" name="GDP-L-fucose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00325</p> + <p>bigg.metabolite: gdpfuc</p> + <p>chebi: CHEBI:17009</p> + <p>pubchem.compound: 439211</p> + <p>metanetx.chemical: MNXM193</p> + <p>formula: C16H23N5O15P2</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_945a262e-c045-4dfe-a70d-e948ad2a61ff"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00325"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gdpfuc"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17009"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439211"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM193"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NO2" hasOnlySubstanceUnits="true" id="M_m01986c" initialConcentration="0" metaid="_9866d694-865b-4df9-ab20-eb10d114f23c" name="glycine" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00037</p> + <p>hmdb: HMDB00123</p> + <p>bigg.metabolite: gly</p> + <p>chebi: CHEBI:15428</p> + <p>inchi: InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)</p> + <p>pubchem.compound: 750</p> + <p>metanetx.chemical: MNXM29</p> + <p>formula: C2H5NO2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9866d694-865b-4df9-ab20-eb10d114f23c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00037"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00123"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gly"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15428"/> + <rdf:li rdf:resource="https://identifiers.org/inchi/InChI=1S/C2H5NO2/c3-1-2(4)5/h1,3H2,(H,4,5)"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/750"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM29"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H11N2O12P2" hasOnlySubstanceUnits="true" id="M_m03106c" initialConcentration="0" metaid="_97e640b3-1f1b-4e3b-abda-a1e2d84549fb" name="UDP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00015</p> + <p>hmdb: HMDB00295</p> + <p>bigg.metabolite: udp</p> + <p>chebi: CHEBI:17659</p> + <p>pubchem.compound: 6031</p> + <p>metanetx.chemical: MNXM17</p> + <p>formula: C9H11N2O12P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97e640b3-1f1b-4e3b-abda-a1e2d84549fb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00015"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00295"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17659"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6031"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01910l" initialConcentration="0" metaid="_76b653c7-d3c8-43c3-86cd-767b18a4ec92" name="galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00984</p> + <p>hmdb: HMDB00143</p> + <p>bigg.metabolite: gal</p> + <p>chebi: CHEBI:28061</p> + <p>pubchem.compound: 439357</p> + <p>metanetx.chemical: MNXM112 || MNXM390</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76b653c7-d3c8-43c3-86cd-767b18a4ec92"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00984"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00143"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gal"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28061"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439357"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM112"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM390"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_m02332s" initialConcentration="0" metaid="acda4521-1f6a-4dff-8902-9ff667fc71dd" name="lactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00243</p> + <p>hmdb: HMDB00186</p> + <p>bigg.metabolite: lcts</p> + <p>chebi: CHEBI:36219</p> + <p>pubchem.compound: 84571</p> + <p>metanetx.chemical: MNXM362</p> + <p>formula: C12H22O11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#acda4521-1f6a-4dff-8902-9ff667fc71dd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00243"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00186"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/lcts"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:36219"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/84571"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM362"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_m01159c" initialConcentration="0" metaid="_5d92060a-34c2-413d-a5c9-b2061168b482" name="6-deoxy-L-galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01019</p> + <p>hmdb: HMDB00174</p> + <p>bigg.metabolite: fuc__L</p> + <p>chebi: CHEBI:2181</p> + <p>pubchem.compound: 17106</p> + <p>metanetx.chemical: MNXM40586 || MNXM659</p> + <p>formula: C6H12O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5d92060a-34c2-413d-a5c9-b2061168b482"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01019"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00174"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fuc__L"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:2181"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/17106"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM40586"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM659"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="-3" fbc:chemicalFormula="C9H11N2O12P2" hasOnlySubstanceUnits="true" id="M_m03106g" initialConcentration="0" metaid="_00d6b0f7-372e-4bcd-b4e4-734060396c74" name="UDP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00015</p> + <p>hmdb: HMDB00295</p> + <p>bigg.metabolite: udp</p> + <p>chebi: CHEBI:17659</p> + <p>pubchem.compound: 6031</p> + <p>metanetx.chemical: MNXM17</p> + <p>formula: C9H11N2O12P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00d6b0f7-372e-4bcd-b4e4-734060396c74"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00015"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00295"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/udp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17659"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6031"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01910s" initialConcentration="0" metaid="_3719fc9b-15c2-48f2-af95-91380ed8985c" name="galactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00984</p> + <p>hmdb: HMDB00143</p> + <p>bigg.metabolite: gal</p> + <p>chebi: CHEBI:28061</p> + <p>pubchem.compound: 439357</p> + <p>metanetx.chemical: MNXM112 || MNXM390</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3719fc9b-15c2-48f2-af95-91380ed8985c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00984"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00143"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gal"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28061"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439357"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM112"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM390"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02845r" initialConcentration="0" metaid="c375b7d8-5974-4e81-bae4-6ffd881176d0" name="ribose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00117</p> + <p>bigg.metabolite: r5p</p> + <p>chebi: CHEBI:17797</p> + <p>pubchem.compound: 440101</p> + <p>metanetx.chemical: MNXM116 || MNXM15900</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c375b7d8-5974-4e81-bae4-6ffd881176d0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00117"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/r5p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17797"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/440101"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM116"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM15900"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="l" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_m02332l" initialConcentration="0" metaid="_18aca9f4-b145-4984-986a-5b4334761e06" name="lactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00243</p> + <p>hmdb: HMDB00186</p> + <p>bigg.metabolite: lcts</p> + <p>chebi: CHEBI:36219</p> + <p>pubchem.compound: 84571</p> + <p>metanetx.chemical: MNXM362</p> + <p>formula: C12H22O11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_18aca9f4-b145-4984-986a-5b4334761e06"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00243"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00186"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/lcts"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:36219"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/84571"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM362"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O8P" hasOnlySubstanceUnits="true" id="M_m02372c" initialConcentration="0" metaid="d64f4610-d8ec-4669-a9cf-fd3e6e1a7f44" name="L-fucose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C02985</p> + <p>bigg.metabolite: fuc1p__L</p> + <p>chebi: CHEBI:28319</p> + <p>pubchem.compound: 439871</p> + <p>metanetx.chemical: MNXM1727</p> + <p>formula: C6H11O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d64f4610-d8ec-4669-a9cf-fd3e6e1a7f44"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02985"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fuc1p__L"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28319"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439871"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1727"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_m02332g" initialConcentration="0" metaid="f1b8e0f2-028c-4545-a1f4-bf750504814b" name="lactose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00243</p> + <p>hmdb: HMDB00186</p> + <p>bigg.metabolite: lcts</p> + <p>chebi: CHEBI:36219</p> + <p>pubchem.compound: 84571</p> + <p>metanetx.chemical: MNXM362</p> + <p>formula: C12H22O11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f1b8e0f2-028c-4545-a1f4-bf750504814b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00243"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00186"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/lcts"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:36219"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/84571"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM362"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="HO4P" hasOnlySubstanceUnits="true" id="M_m02751c" initialConcentration="0" metaid="c289024b-4290-4c49-b993-7aacf17d0e1b" name="Pi" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00009</p> + <p>bigg.metabolite: pi</p> + <p>chebi: CHEBI:18367</p> + <p>pubchem.compound: 1004</p> + <p>metanetx.chemical: MNXM9</p> + <p>formula: HO4P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c289024b-4290-4c49-b993-7aacf17d0e1b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00009"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/pi"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18367"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1004"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H13O10P" hasOnlySubstanceUnits="true" id="M_m02884c" initialConcentration="0" metaid="_3392db14-e8b9-4ab8-9f26-2c9ecda86328" name="sedoheptulose-7-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C05382</p> + <p>bigg.metabolite: s7p</p> + <p>chebi: CHEBI:15721</p> + <p>pubchem.compound: 22833559</p> + <p>metanetx.chemical: MNXM271</p> + <p>formula: C7H13O10P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3392db14-e8b9-4ab8-9f26-2c9ecda86328"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C05382"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/s7p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15721"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833559"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM271"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_m02844c" initialConcentration="0" metaid="_43c0bdf1-d836-4a9f-921f-2ac7f20fb6bf" name="ribose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00620</p> + <p>bigg.metabolite: r1p</p> + <p>chebi: CHEBI:35425</p> + <p>pubchem.compound: 439236</p> + <p>metanetx.chemical: MNXM295</p> + <p>formula: C5H9O8P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_43c0bdf1-d836-4a9f-921f-2ac7f20fb6bf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00620"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/r1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:35425"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439236"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM295"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H9O9P" hasOnlySubstanceUnits="true" id="M_m01961c" initialConcentration="0" metaid="_24aa4d4c-882c-444d-b1e4-8191e7fe20d9" name="glucono-1,5-lactone-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01236</p> + <p>bigg.metabolite: 6pgl</p> + <p>chebi: CHEBI:16938</p> + <p>pubchem.compound: 439452</p> + <p>metanetx.chemical: MNXM429</p> + <p>formula: C6H9O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24aa4d4c-882c-444d-b1e4-8191e7fe20d9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01236"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/6pgl"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16938"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439452"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM429"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01840c" initialConcentration="0" metaid="_96ceef6d-b39c-45dc-a853-bd5aa0e6c22e" name="fructose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C02336</p> + <p>hmdb: HMDB00660</p> + <p>bigg.metabolite: fru</p> + <p>chebi: CHEBI:28645</p> + <p>pubchem.compound: 439709</p> + <p>metanetx.chemical: MNXM175</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96ceef6d-b39c-45dc-a853-bd5aa0e6c22e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02336"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00660"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fru"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28645"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439709"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM175"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="HO7P2" hasOnlySubstanceUnits="true" id="M_m02759c" initialConcentration="0" metaid="_4cb8da7d-c29f-4ff0-92dd-f4180921a1f0" name="PPi" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00013</p> + <p>hmdb: HMDB00250</p> + <p>bigg.metabolite: ppi</p> + <p>chebi: CHEBI:18361</p> + <p>pubchem.compound: 644102</p> + <p>metanetx.chemical: MNXM11</p> + <p>formula: HO7P2</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4cb8da7d-c29f-4ff0-92dd-f4180921a1f0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00013"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00250"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/ppi"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18361"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/644102"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H5O6P" hasOnlySubstanceUnits="true" id="M_m01690c" initialConcentration="0" metaid="fe9d95be-b2e5-4c74-9c43-983a56005d1e" name="DHAP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00111</p> + <p>bigg.metabolite: dhap</p> + <p>chebi: CHEBI:16108</p> + <p>pubchem.compound: 668</p> + <p>metanetx.chemical: MNXM77</p> + <p>formula: C3H5O6P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fe9d95be-b2e5-4c74-9c43-983a56005d1e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00111"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/dhap"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16108"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/668"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM77"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01322c" initialConcentration="0" metaid="ccf14f47-b931-4970-9c98-96b790907dbc" name="alpha-D-galactose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C03384</p> + <p>bigg.metabolite: gal1p</p> + <p>chebi: CHEBI:17973</p> + <p>pubchem.compound: 123912</p> + <p>metanetx.chemical: MNXM336</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ccf14f47-b931-4970-9c98-96b790907dbc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C03384"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/gal1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17973"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/123912"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM336"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C10H12N5O7P" hasOnlySubstanceUnits="true" id="M_m01334c" initialConcentration="0" metaid="d430dc71-00bc-4d61-94b8-202046401905" name="AMP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00020</p> + <p>hmdb: HMDB00045</p> + <p>bigg.metabolite: amp</p> + <p>chebi: CHEBI:16027</p> + <p>pubchem.compound: 6083</p> + <p>metanetx.chemical: MNXM14</p> + <p>formula: C10H12N5O7P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d430dc71-00bc-4d61-94b8-202046401905"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00020"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00045"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/amp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16027"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6083"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O" hasOnlySubstanceUnits="true" id="M_m01249c" initialConcentration="0" metaid="b26172e9-a9bb-418f-90c4-4132af1dada8" name="acetaldehyde" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00084</p> + <p>hmdb: HMDB00990</p> + <p>bigg.metabolite: acald</p> + <p>chebi: CHEBI:15343</p> + <p>pubchem.compound: 177</p> + <p>metanetx.chemical: MNXM75</p> + <p>formula: C2H4O</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b26172e9-a9bb-418f-90c4-4132af1dada8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00084"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00990"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/acald"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15343"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/177"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM75"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H9O9P" hasOnlySubstanceUnits="true" id="M_m01961r" initialConcentration="0" metaid="_3f0abace-5e5b-40c8-b067-d21e4368010d" name="glucono-1,5-lactone-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01236</p> + <p>bigg.metabolite: 6pgl</p> + <p>chebi: CHEBI:16938</p> + <p>pubchem.compound: 439452</p> + <p>metanetx.chemical: MNXM429</p> + <p>formula: C6H9O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3f0abace-5e5b-40c8-b067-d21e4368010d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01236"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/6pgl"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16938"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439452"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM429"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C10H11N4O14P3" hasOnlySubstanceUnits="true" id="M_m02193c" initialConcentration="0" metaid="d86ee995-ab70-4b25-8ecf-739633917441" name="ITP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00081</p> + <p>bigg.metabolite: itp</p> + <p>chebi: CHEBI:16039</p> + <p>pubchem.compound: 8583</p> + <p>metanetx.chemical: MNXM423</p> + <p>formula: C10H11N4O14P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d86ee995-ab70-4b25-8ecf-739633917441"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00081"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/itp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16039"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/8583"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM423"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_m01840s" initialConcentration="0" metaid="b908e607-79da-478f-9bb1-e4ccd3243f7f" name="fructose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C02336</p> + <p>hmdb: HMDB00660</p> + <p>bigg.metabolite: fru</p> + <p>chebi: CHEBI:28645</p> + <p>pubchem.compound: 439709</p> + <p>metanetx.chemical: MNXM175</p> + <p>formula: C6H12O6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b908e607-79da-478f-9bb1-e4ccd3243f7f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C02336"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00660"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/fru"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28645"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/439709"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM175"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="g" constant="false" fbc:charge="1" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_m02039g" initialConcentration="0" metaid="_42778420-d51a-415e-8fd5-a1e6dd29336f" name="H+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00080</p> + <p>bigg.metabolite: h</p> + <p>chebi: CHEBI:24636</p> + <p>pubchem.compound: 1038</p> + <p>metanetx.chemical: MNXM1</p> + <p>formula: H</p> + <p>charge: 1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_42778420-d51a-415e-8fd5-a1e6dd29336f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00080"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:24636"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1038"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C7H12O13P2" hasOnlySubstanceUnits="true" id="M_m02883c" initialConcentration="0" metaid="_22c2c43e-d9ef-4b0b-ae59-18c23634ad89" name="sedoheptulose-1,7-bisphosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00447</p> + <p>chebi: CHEBI:17969</p> + <p>pubchem.compound: 164735</p> + <p>metanetx.chemical: MNXM163895 || MNXM1294</p> + <p>formula: C7H12O13P2</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_22c2c43e-d9ef-4b0b-ae59-18c23634ad89"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00447"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17969"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/164735"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM163895"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1294"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H10O10P" hasOnlySubstanceUnits="true" id="M_m01169r" initialConcentration="0" metaid="_7c933ae2-cfcf-4aa9-af8d-bbf16388fed5" name="6-phospho-D-gluconate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00345</p> + <p>hmdb: HMDB01316</p> + <p>bigg.metabolite: 6pgc</p> + <p>chebi: CHEBI:48928</p> + <p>pubchem.compound: 91493</p> + <p>metanetx.chemical: MNXM325</p> + <p>formula: C6H10O10P</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7c933ae2-cfcf-4aa9-af8d-bbf16388fed5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00345"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01316"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/6pgc"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:48928"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/91493"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM325"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_m02843c" initialConcentration="0" metaid="c86562cc-a38d-4105-b709-81e1ed867220" name="ribose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00121</p> + <p>hmdb: HMDB00283</p> + <p>bigg.metabolite: rib__D</p> + <p>chebi: CHEBI:16988</p> + <p>pubchem.compound: 5779</p> + <p>metanetx.chemical: MNXM242</p> + <p>formula: C5H10O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c86562cc-a38d-4105-b709-81e1ed867220"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00121"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00283"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/rib__D"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16988"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5779"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM242"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01968c" initialConcentration="0" metaid="_370aa63f-8947-4333-9372-c95e0079773c" name="glucose-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00092</p> + <p>bigg.metabolite: g6p</p> + <p>chebi: CHEBI:4170</p> + <p>pubchem.compound: 5958</p> + <p>metanetx.chemical: MNXM160</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_370aa63f-8947-4333-9372-c95e0079773c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00092"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/g6p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4170"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5958"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM160"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="1" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_m02039c" initialConcentration="0" metaid="_455b3b9e-68d4-4ea4-b895-e4ac1cc17c0d" name="H+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00080</p> + <p>bigg.metabolite: h</p> + <p>chebi: CHEBI:24636</p> + <p>pubchem.compound: 1038</p> + <p>metanetx.chemical: MNXM1</p> + <p>formula: H</p> + <p>charge: 1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_455b3b9e-68d4-4ea4-b895-e4ac1cc17c0d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00080"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:24636"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1038"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01968r" initialConcentration="0" metaid="_2245cdf3-b905-4470-896d-c12a111787e7" name="glucose-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00092</p> + <p>bigg.metabolite: g6p</p> + <p>chebi: CHEBI:4170</p> + <p>pubchem.compound: 5958</p> + <p>metanetx.chemical: MNXM160</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2245cdf3-b905-4470-896d-c12a111787e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00092"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/g6p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:4170"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5958"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM160"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C6H10O10P" hasOnlySubstanceUnits="true" id="M_m01169c" initialConcentration="0" metaid="dfbe4e2b-1fd6-4a34-8064-53308f79888f" name="6-phospho-D-gluconate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00345</p> + <p>hmdb: HMDB01316</p> + <p>bigg.metabolite: 6pgc</p> + <p>chebi: CHEBI:48928</p> + <p>pubchem.compound: 91493</p> + <p>metanetx.chemical: MNXM325</p> + <p>formula: C6H10O10P</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dfbe4e2b-1fd6-4a34-8064-53308f79888f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00345"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB01316"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/6pgc"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:48928"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/91493"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM325"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="1" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_m02039r" initialConcentration="0" metaid="a7079a2e-7f55-44c1-bcc2-5989ea949235" name="H+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00080</p> + <p>bigg.metabolite: h</p> + <p>chebi: CHEBI:24636</p> + <p>pubchem.compound: 1038</p> + <p>metanetx.chemical: MNXM1</p> + <p>formula: H</p> + <p>charge: 1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a7079a2e-7f55-44c1-bcc2-5989ea949235"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00080"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:24636"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1038"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="1" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_m02039s" initialConcentration="0" metaid="_48b7ef43-d087-4f37-9392-1047b65c4dbd" name="H+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00080</p> + <p>bigg.metabolite: h</p> + <p>chebi: CHEBI:24636</p> + <p>pubchem.compound: 1038</p> + <p>metanetx.chemical: MNXM1</p> + <p>formula: H</p> + <p>charge: 1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_48b7ef43-d087-4f37-9392-1047b65c4dbd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00080"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:24636"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/1038"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C3H5O6P" hasOnlySubstanceUnits="true" id="M_m01939c" initialConcentration="0" metaid="_6e928c86-cb07-4ee4-9da1-206e92aa5aae" name="GAP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00118</p> + <p>bigg.metabolite: g3p</p> + <p>chebi: CHEBI:29052</p> + <p>pubchem.compound: 729</p> + <p>metanetx.chemical: MNXM74</p> + <p>formula: C3H5O6P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6e928c86-cb07-4ee4-9da1-206e92aa5aae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00118"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/g3p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:29052"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/729"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM74"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C21H26N7O17P3" hasOnlySubstanceUnits="true" id="M_m02555c" initialConcentration="0" metaid="_4713da60-2315-4728-8c49-9d80e9d06982" name="NADPH" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00005</p> + <p>hmdb: HMDB00221</p> + <p>bigg.metabolite: nadph</p> + <p>chebi: CHEBI:16474</p> + <p>pubchem.compound: 22833512</p> + <p>metanetx.chemical: MNXM6</p> + <p>formula: C21H26N7O17P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4713da60-2315-4728-8c49-9d80e9d06982"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00005"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00221"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadph"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16474"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833512"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01967c" initialConcentration="0" metaid="eb903c59-35de-4770-9346-d9840ea78b8b" name="glucose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00103</p> + <p>bigg.metabolite: g1p</p> + <p>chebi: CHEBI:16077</p> + <p>pubchem.compound: 65533</p> + <p>metanetx.chemical: MNXM89588</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eb903c59-35de-4770-9346-d9840ea78b8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00103"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/g1p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16077"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/65533"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89588"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O4" hasOnlySubstanceUnits="true" id="M_m01672c" initialConcentration="0" metaid="c684250e-c857-4d7b-b61e-1695a0a407a8" name="deoxyribose" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C01801</p> + <p>hmdb: HMDB03224</p> + <p>bigg.metabolite: drib</p> + <p>chebi: CHEBI:28816</p> + <p>pubchem.compound: 22833604</p> + <p>metanetx.chemical: MNXM90412 || MNXM2474</p> + <p>formula: C5H10O4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c684250e-c857-4d7b-b61e-1695a0a407a8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C01801"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB03224"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/drib"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:28816"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833604"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM90412"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2474"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-4" fbc:chemicalFormula="C21H26N7O17P3" hasOnlySubstanceUnits="true" id="M_m02555r" initialConcentration="0" metaid="_9dd9e24d-3d87-43d4-a57f-7319fda9d5ae" name="NADPH" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00005</p> + <p>hmdb: HMDB00221</p> + <p>bigg.metabolite: nadph</p> + <p>chebi: CHEBI:16474</p> + <p>pubchem.compound: 22833512</p> + <p>metanetx.chemical: MNXM6</p> + <p>formula: C21H26N7O17P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9dd9e24d-3d87-43d4-a57f-7319fda9d5ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00005"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00221"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadph"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16474"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/22833512"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O3" hasOnlySubstanceUnits="true" id="M_m01983s" initialConcentration="0" metaid="_681859d4-f24a-406f-8efe-f13934d5ffd5" name="glycerol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00116</p> + <p>hmdb: HMDB00131</p> + <p>bigg.metabolite: glyc</p> + <p>chebi: CHEBI:17522</p> + <p>pubchem.compound: 753</p> + <p>metanetx.chemical: MNXM89612</p> + <p>formula: C3H8O3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_681859d4-f24a-406f-8efe-f13934d5ffd5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00116"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00131"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/glyc"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:17522"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/753"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89612"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-3" fbc:chemicalFormula="C21H25N7O17P3" hasOnlySubstanceUnits="true" id="M_m02554c" initialConcentration="0" metaid="_9d6ff91d-ad3d-4e8d-9c4a-fce47e8acd53" name="NADP+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00006</p> + <p>hmdb: HMDB00217</p> + <p>bigg.metabolite: nadp</p> + <p>chebi: CHEBI:18009</p> + <p>pubchem.compound: 5886</p> + <p>metanetx.chemical: MNXM5</p> + <p>formula: C21H25N7O17P3</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d6ff91d-ad3d-4e8d-9c4a-fce47e8acd53"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00006"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00217"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18009"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5886"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H12O5" hasOnlySubstanceUnits="true" id="M_m02841c" initialConcentration="0" metaid="eb784776-6b61-4d67-9441-2af7f5d1e57f" name="ribitol" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00474</p> + <p>hmdb: HMDB00508</p> + <p>bigg.metabolite: rbt</p> + <p>chebi: CHEBI:15963</p> + <p>pubchem.compound: 827</p> + <p>metanetx.chemical: MNXM1820</p> + <p>formula: C5H12O5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eb784776-6b61-4d67-9441-2af7f5d1e57f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00474"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00508"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/rbt"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15963"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/827"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM1820"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_m01845c" initialConcentration="0" metaid="_435773db-71ea-408f-b0f1-852fadf7ea80" name="fructose-6-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00085</p> + <p>bigg.metabolite: f6p</p> + <p>chebi: CHEBI:15946</p> + <p>pubchem.compound: 69507</p> + <p>metanetx.chemical: MNXM89621 || MNXM162235</p> + <p>formula: C6H11O9P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_435773db-71ea-408f-b0f1-852fadf7ea80"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00085"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/f6p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15946"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/69507"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM89621"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM162235"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="s" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040s" initialConcentration="0" metaid="edc2812f-d50e-40df-9c9b-c62283dd5dfa" name="H2O" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>lipidmaps: LMST01040128</p> + <p>kegg.compound: C00001</p> + <p>hmdb: HMDB02111</p> + <p>bigg.metabolite: h2o</p> + <p>chebi: CHEBI:15377</p> + <p>pubchem.compound: 962</p> + <p>metanetx.chemical: MNXM2</p> + <p>formula: H2O</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#edc2812f-d50e-40df-9c9b-c62283dd5dfa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-4" fbc:chemicalFormula="C9H11N2O15P3" hasOnlySubstanceUnits="true" id="M_m03130c" initialConcentration="0" metaid="_623bdee5-7e3f-429d-8798-39cae174c79d" name="UTP" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00075</p> + <p>hmdb: HMDB00285</p> + <p>bigg.metabolite: utp</p> + <p>chebi: CHEBI:15713</p> + <p>pubchem.compound: 6133</p> + <p>metanetx.chemical: MNXM121</p> + <p>formula: C9H11N2O15P3</p> + <p>charge: -4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_623bdee5-7e3f-429d-8798-39cae174c79d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00075"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00285"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/utp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15713"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/6133"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM121"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C7H13O10P" hasOnlySubstanceUnits="true" id="M_m03166c" initialConcentration="0" metaid="be62933b-1dd6-4a8b-87c9-a14eb36e9b49" name="sedoheptulose-1-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C06222</p> + <p>chebi: CHEBI:9082</p> + <p>metanetx.chemical: MNXM12925</p> + <p>formula: C7H13O10P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#be62933b-1dd6-4a8b-87c9-a14eb36e9b49"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C06222"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:9082"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM12925"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-1" fbc:chemicalFormula="C6H11O7" hasOnlySubstanceUnits="true" id="M_m01683c" initialConcentration="0" metaid="_7e64183c-bff4-44e2-bdb9-41d69f6bed98" name="D-gluconic acid" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00257</p> + <p>hmdb: HMDB00625</p> + <p>chebi: CHEBI:33198</p> + <p>pubchem.compound: 10690</p> + <p>metanetx.chemical: MNXM341</p> + <p>formula: C6H11O7</p> + <p>charge: -1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7e64183c-bff4-44e2-bdb9-41d69f6bed98"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00257"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00625"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:33198"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/10690"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM341"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_m02040r" initialConcentration="0" metaid="e3ae9f2d-61b6-4fc2-b932-c251c833a03e" name="H2O" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>lipidmaps: LMST01040128</p> + <p>kegg.compound: C00001</p> + <p>hmdb: HMDB02111</p> + <p>bigg.metabolite: h2o</p> + <p>chebi: CHEBI:15377</p> + <p>pubchem.compound: 962</p> + <p>metanetx.chemical: MNXM2</p> + <p>formula: H2O</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e3ae9f2d-61b6-4fc2-b932-c251c833a03e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/lipidmaps/LMST01040128"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00001"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB02111"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/h2o"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:15377"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/962"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="r" constant="false" fbc:charge="-3" fbc:chemicalFormula="C21H25N7O17P3" hasOnlySubstanceUnits="true" id="M_m02554r" initialConcentration="0" metaid="_2dffc121-cbfa-4ef2-bf72-85b96310b284" name="NADP+" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00006</p> + <p>hmdb: HMDB00217</p> + <p>bigg.metabolite: nadp</p> + <p>chebi: CHEBI:18009</p> + <p>pubchem.compound: 5886</p> + <p>metanetx.chemical: MNXM5</p> + <p>formula: C21H25N7O17P3</p> + <p>charge: -3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2dffc121-cbfa-4ef2-bf72-85b96310b284"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00006"/> + <rdf:li rdf:resource="https://identifiers.org/hmdb/HMDB00217"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/nadp"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:18009"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/5886"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="-2" fbc:chemicalFormula="C5H9O7P" hasOnlySubstanceUnits="true" id="M_m00640c" initialConcentration="0" metaid="_646e6e22-6191-458f-b8cb-359247dfbf5f" name="2-deoxy-D-ribose-5-phosphate" sboTerm="SBO:0000247"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>kegg.compound: C00673</p> + <p>bigg.metabolite: 2dr5p</p> + <p>chebi: CHEBI:16132</p> + <p>pubchem.compound: 45934311</p> + <p>metanetx.chemical: MNXM2179</p> + <p>formula: C5H9O7P</p> + <p>charge: -2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_646e6e22-6191-458f-b8cb-359247dfbf5f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/kegg.compound/C00673"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.metabolite/2dr5p"/> + <rdf:li rdf:resource="https://identifiers.org/chebi/CHEBI:16132"/> + <rdf:li rdf:resource="https://identifiers.org/pubchem.compound/45934311"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.chemical/MNXM2179"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + </species> + </listOfSpecies> + <listOfParameters> + <parameter constant="true" id="UPPER_BOUND_1000_0" units="mmol_per_gDW_per_hr" value="1000"/> + <parameter constant="true" id="LOWER_BOUND_1000_0" units="mmol_per_gDW_per_hr" value="-1000"/> + <parameter constant="true" id="LOWER_BOUND_0_0" units="mmol_per_gDW_per_hr" value="0"/> + </listOfParameters> + <listOfReactions> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4831" metaid="a3b700c3-d335-4df3-bb92-f8fc04db5f3d" name="R_HMR_4831" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 1.1.99.13</p> + <p>metanetx.reaction: MNXR107115</p> + <p>kegg.reaction: R01680</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 1.1.99.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a3b700c3-d335-4df3-bb92-f8fc04db5f3d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.99.13"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107115"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01680"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_m02552s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02332s" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02553s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m00812s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039s" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4710" metaid="e6a0e367-66fa-4310-a86d-7dde3669eac3" name="R_HMR_4710" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:3023765</p> + <p>ec-code: 5.4.2.7</p> + <p>metanetx.reaction: MNXR103116</p> + <p>kegg.reaction: R02749</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.4.2.7</p> + <p>pmids: 3023765</p> + <p>GENE_ASSOCIATION: ( ENSG00000169299 ) OR ( ENSG00000180953 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e6a0e367-66fa-4310-a86d-7dde3669eac3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.7"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103116"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02749"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3023765"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000169299"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000180953"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m00639c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m00640c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4832" metaid="_0a972dea-1cbc-4140-9dc6-ed7934752c06" name="R_HMR_4832" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:3109378;UNIPROT:P16278</p> + <p>ec-code: 3.2.1.23</p> + <p>metanetx.reaction: MNXR109113 || MNXR105374</p> + <p>kegg.reaction: R04783</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 3.2.1.23</p> + <p>pmids: 3109378</p> + <p>GENE_ASSOCIATION: ENSG00000115850 AND ENSG00000163521 AND ENSG00000170266 AND ENSG00000188167</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0a972dea-1cbc-4140-9dc6-ed7934752c06"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.23"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR109113"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105374"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R04783"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3109378"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="ENSG00000170266"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000163521"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000188167"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000115850"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m00810s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01965s" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m00812s" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4315" metaid="_47e92709-8d94-4b33-a876-2890e1758a66" name="R_HMR_4315" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 1.1.1.14</p> + <p>metanetx.reaction: MNXR104283</p> + <p>kegg.reaction: R00875</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 1.1.1.14</p> + <p>GENE_ASSOCIATION: ENSG00000140263</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_47e92709-8d94-4b33-a876-2890e1758a66"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.14"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104283"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00875"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000140263"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4316" metaid="dc10854d-832c-4e85-a025-26973915eb3c" name="R_HMR_4316" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 1.1.1.21</p> + <p>metanetx.reaction: MNXR104287</p> + <p>kegg.reaction: R01787</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 1.1.1.21</p> + <p>GENE_ASSOCIATION: ( ENSG00000085662 ) OR ( ENSG00000198074 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dc10854d-832c-4e85-a025-26973915eb3c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.21"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104287"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01787"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000198074"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000085662"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01965c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4317" metaid="_36d1db72-1f57-4631-aff2-71a5a6395889" name="R_HMR_4317" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:2211634</p> + <p>ec-code: 2.7.1.-</p> + <p>metanetx.reaction: MNXR103725</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.-</p> + <p>pmids: 2211634</p> + <p>GENE_ASSOCIATION: ( ENSG00000116199 ) OR ( ENSG00000141560 ) OR ( ENSG00000162408 ) OR ( ENSG00000167363 ) OR ( ENSG00000172456 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_36d1db72-1f57-4631-aff2-71a5a6395889"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.-"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103725"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2211634"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000116199"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141560"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000162408"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000172456"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000167363"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02917c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4318" metaid="_008e8008-7d8f-4404-bca8-d5c7e6a2b321" name="R_HMR_4318" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.-</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.-</p> + <p>GENE_ASSOCIATION: ( ENSG00000116199 ) OR ( ENSG00000141560 ) OR ( ENSG00000162408 ) OR ( ENSG00000167363 ) OR ( ENSG00000172456 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_008e8008-7d8f-4404-bca8-d5c7e6a2b321"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.-"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000116199"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141560"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000162408"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000172456"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000167363"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01844c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_3944" metaid="e3f7be38-4458-4c4b-9e00-ba70676d46ba" name="R_HMR_3944" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:223665;PMID:4433565;PMID:4436332;PMID:6318818;PMID:6320876;PMID:8612650</p> + <p>ec-code: 2.7.7.9</p> + <p>metanetx.reaction: MNXR100022</p> + <p>kegg.reaction: R00289</p> + <p>bigg.reaction: GALUi</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.7.9</p> + <p>pmids: 223665,4433565,4436332,6318818,6320876,8612650</p> + <p>GENE_ASSOCIATION: ENSG00000169764</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e3f7be38-4458-4c4b-9e00-ba70676d46ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.9"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100022"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00289"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALUi"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/223665"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6318818"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8612650"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6320876"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4433565"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4436332"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000169764"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m03130c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01967c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4319" metaid="_45d0d167-05cb-4738-8b64-49f3791a4688" name="R_HMR_4319" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:16906315;PMID:7061426;PMID:7150652;PMID:8717435</p> + <p>ec-code: 2.7.1.1</p> + <p>metanetx.reaction: MNXR100614</p> + <p>kegg.reaction: R00760</p> + <p>bigg.reaction: HEX7</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.1</p> + <p>pmids: 7061426,7150652,8717435,16906315</p> + <p>GENE_ASSOCIATION: ( ENSG00000156510 ) OR ( ENSG00000156515 ) OR ( ENSG00000159399 ) OR ( ENSG00000160883 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_45d0d167-05cb-4738-8b64-49f3791a4688"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100614"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00760"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/HEX7"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7150652"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7061426"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16906315"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8717435"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000159399"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000160883"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156510"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156515"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_RPEc" metaid="_060005cd-e77c-4aec-9a9e-9953a24e631e" name="Ribulose 5-Phosphate 3-Epimerase" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> + <p>ec-code: 5.1.3.1</p> + <p>bigg.reaction: RPEc</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.1.3.1</p> + <p>pmids: 4382012,13575411</p> + <p>GENE_ASSOCIATION: ENSG00000197713</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_060005cd-e77c-4aec-9a9e-9953a24e631e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.1.3.1"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RPEc"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000197713"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02846c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01761c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_GLYPHEHYc" metaid="_841ed12c-3095-4d2d-88c0-b2d51dc181bc" name="Hydrolysis of Glycylphenylalanine" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: most probable reaction. added during gap filling.</p> + <p>metanetx.reaction: MNXR100357</p> + <p>bigg.reaction: GLYPHEHYc</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_841ed12c-3095-4d2d-88c0-b2d51dc181bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100357"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GLYPHEHYc"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_glyphe_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02724c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01986c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8762" metaid="b7a3dbfa-eb0f-42d0-890e-a21c45957a2f" name="R_HMR_8762" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 4.1.2.13</p> + <p>metanetx.reaction: MNXR99466</p> + <p>bigg.reaction: FBP26</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 4.1.2.13</p> + <p>GENE_ASSOCIATION: ( ENSG00000109107 ) OR ( ENSG00000136872 ) OR ( ENSG00000149925 ) OR ( ENSG00000285043 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b7a3dbfa-eb0f-42d0-890e-a21c45957a2f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.13"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99466"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBP26"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000136872"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000149925"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000109107"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000285043"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01690c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_7674" metaid="_3217a74c-f7b4-467b-a857-58e20a23c963" name="R_HMR_7674" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.4.1.22</p> + <p>metanetx.reaction: MNXR105080</p> + <p>kegg.reaction: R00503</p> + <p>bigg.reaction: UGALGTg</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.4.1.22</p> + <p>GENE_ASSOCIATION: ( ENSG00000086062 ) OR ( ENSG00000117411 ) OR ( ENSG00000167531 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3217a74c-f7b4-467b-a857-58e20a23c963"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.4.1.22"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105080"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00503"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/UGALGTg"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000167531"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000086062"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000117411"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01965g" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03107g" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02039g" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03106g" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02332g" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8761" metaid="_9b5f5c01-dd04-4b3e-a91e-008503d581a0" name="R_HMR_8761" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.3</p> + <p>metanetx.reaction: MNXR100938</p> + <p>kegg.reaction: R02927</p> + <p>bigg.reaction: KHK3</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.3</p> + <p>GENE_ASSOCIATION: ENSG00000138030</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b5f5c01-dd04-4b3e-a91e-008503d581a0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100938"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02927"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/KHK3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01745c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4320" metaid="a8abfc18-6328-4a50-8b08-d17a3f28c8b2" name="R_HMR_4320" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10085245</p> + <p>ec-code: 2.7.1.-</p> + <p>metanetx.reaction: MNXR103514</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.-</p> + <p>pmids: 10085245</p> + <p>GENE_ASSOCIATION: ( ENSG00000116199 ) OR ( ENSG00000141560 ) OR ( ENSG00000162408 ) OR ( ENSG00000167363 ) OR ( ENSG00000172456 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a8abfc18-6328-4a50-8b08-d17a3f28c8b2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.-"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103514"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10085245"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000116199"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141560"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000162408"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000172456"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000167363"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01717c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8766" metaid="_67a27b12-ccf1-4623-a972-3aff79c6f80d" name="R_HMR_8766" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 1.1.1.21</p> + <p>metanetx.reaction: MNXR100012</p> + <p>kegg.reaction: R01095</p> + <p>bigg.reaction: GALSIDEtl</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 1.1.1.21</p> + <p>GENE_ASSOCIATION: ( ENSG00000085662 ) OR ( ENSG00000198074 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_67a27b12-ccf1-4623-a972-3aff79c6f80d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.21"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100012"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01095"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALSIDEtl"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000198074"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000085662"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01910c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01909c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8767" metaid="_8b416bb5-ba06-4ea8-a781-6758242e28a2" name="R_HMR_8767" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.7.12</p> + <p>metanetx.reaction: MNXR100027</p> + <p>kegg.reaction: R00502</p> + <p>bigg.reaction: GALt2_2</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.7.12</p> + <p>GENE_ASSOCIATION: ENSG00000213930</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8b416bb5-ba06-4ea8-a781-6758242e28a2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.12"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100027"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00502"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALt2_2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000213930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m03130c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01322c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8764" metaid="_4a18991c-afe6-4ab4-9518-7eea4183c3a8" name="R_HMR_8764" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 3.2.1.108</p> + <p>metanetx.reaction: MNXR101000</p> + <p>kegg.reaction: R06114</p> + <p>bigg.reaction: LACZly</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 3.2.1.108</p> + <p>GENE_ASSOCIATION: ENSG00000115850</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a18991c-afe6-4ab4-9518-7eea4183c3a8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.108"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101000"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R06114"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/LACZly"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000115850"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040l" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02332l" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01910l" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01965l" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4400" metaid="_24e2c246-dc4f-43cb-b817-8363e45ca0f0" name="R_HMR_4400" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10410995;PMID:2428310;PMID:9603974</p> + <p>ec-code: 1.1.1.271</p> + <p>metanetx.reaction: MNXR100108 || MNXR105384</p> + <p>kegg.reaction: R05692</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 1.1.1.271</p> + <p>pmids: 2428310,9603974,10410995</p> + <p>GENE_ASSOCIATION: ENSG00000104522</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24e2c246-dc4f-43cb-b817-8363e45ca0f0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.271"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100108"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105384"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R05692"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2428310"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9603974"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10410995"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000104522"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01949c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01950c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4565" metaid="dc55ec50-f182-42db-834f-d0cf1b380879" name="R_HMR_4565" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:8549825;UNIPROT:P37837</p> + <p>ec-code: 2.2.1.2</p> + <p>metanetx.reaction: MNXR104715</p> + <p>kegg.reaction: R08575</p> + <p>bigg.reaction: TALA</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.2.1.2</p> + <p>pmids: 8549825</p> + <p>GENE_ASSOCIATION: ENSG00000177156</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dc55ec50-f182-42db-834f-d0cf1b380879"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.2.1.2"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104715"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R08575"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TALA"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8549825"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000177156"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01785c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4841" metaid="f74d8639-e4ff-4f06-b6de-2c4de6cff989" name="R_HMR_4841" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:15234337</p> + <p>ec-code: 1.2.1.5</p> + <p>metanetx.reaction: MNXR105388</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.2.1.5</p> + <p>pmids: 15234337</p> + <p>GENE_ASSOCIATION: ( ENSG00000006534 ) OR ( ENSG00000108602 ) OR ( ENSG00000132746 ) OR ( ENSG00000184254 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f74d8639-e4ff-4f06-b6de-2c4de6cff989"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.2.1.5"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105388"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000108602"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000132746"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000184254"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000006534"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02843c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02841c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4401" metaid="_784dbb17-65c3-4806-8d58-6101b6f50cb1" name="R_HMR_4401" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:5646162;PMID:6251080</p> + <p>ec-code: 2.7.7.30</p> + <p>metanetx.reaction: MNXR99061</p> + <p>kegg.reaction: R01951</p> + <p>bigg.reaction: F1PGT</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.7.30</p> + <p>pmids: 5646162,6251080</p> + <p>GENE_ASSOCIATION: ( ENSG00000116783 ) OR ( ENSG00000254685 ) OR ( ENSG00000259030 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_784dbb17-65c3-4806-8d58-6101b6f50cb1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.30"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99061"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01951"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/F1PGT"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5646162"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6251080"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000116783"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000254685"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000259030"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01950c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02034c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02372c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_RE1342C" metaid="_35970be8-355d-4991-bcbd-bf773e56c260" name="Aldehyde Reductase" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:9537432</p> + <p>ec-code: 1.1.1.21</p> + <p>metanetx.reaction: MNXR103511</p> + <p>bigg.reaction: RE1342C</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 1.1.1.21</p> + <p>pmids: 9537432</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_35970be8-355d-4991-bcbd-bf773e56c260"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.21"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103511"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RE1342C"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9537432"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01682c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01965c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4402" metaid="f3a0a958-fed9-477e-ae39-8cdedad1f5bc" name="R_HMR_4402" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:12056818;PMID:12413479</p> + <p>ec-code: 2.7.1.52</p> + <p>metanetx.reaction: MNXR99595 || MNXR107992</p> + <p>kegg.reaction: R03161</p> + <p>bigg.reaction: FK</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.52</p> + <p>pmids: 12056818,12413479</p> + <p>GENE_ASSOCIATION: ENSG00000157353</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f3a0a958-fed9-477e-ae39-8cdedad1f5bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.52"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99595"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107992"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03161"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FK"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12056818"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12413479"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000157353"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01159c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02372c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4567" metaid="_9ff90316-748a-4f8a-91f7-86e61fbd681e" name="R_HMR_4567" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:4084320;PMID:4272358</p> + <p>ec-code: 2.7.1.11</p> + <p>metanetx.reaction: MNXR105338 || MNXR102510</p> + <p>kegg.reaction: R01843</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.11</p> + <p>pmids: 4084320,4272358</p> + <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ff90316-748a-4f8a-91f7-86e61fbd681e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105338"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102510"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01843"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4272358"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4084320"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02883c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4403" metaid="_41178734-fe7b-47f2-b84a-e69e20728adb" name="R_HMR_4403" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:457669;PMID:5050937</p> + <p>ec-code: 5.3.1.25</p> + <p>metanetx.reaction: MNXR99468 || MNXR107994</p> + <p>kegg.reaction: R03163</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 5.3.1.25</p> + <p>pmids: 457669,5050937</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_41178734-fe7b-47f2-b84a-e69e20728adb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.25"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99468"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107994"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03163"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/457669"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5050937"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_m01159c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02373c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4568" metaid="_414cb744-0f0d-4837-b547-ca5fc7b2529a" name="R_HMR_4568" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:11945275</p> + <p>ec-code: 2.7.1.11</p> + <p>metanetx.reaction: MNXR105339</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.11</p> + <p>pmids: 11945275</p> + <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_414cb744-0f0d-4837-b547-ca5fc7b2529a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105339"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/11945275"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m03106c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02883c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03130c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4128" metaid="_093ee677-4ba5-4528-856e-60f371fedfe8" name="R_HMR_4128" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:191453;PMID:845161</p> + <p>ec-code: 5.1.3.2</p> + <p>metanetx.reaction: MNXR105057</p> + <p>kegg.reaction: R00291</p> + <p>bigg.reaction: UDPG4E</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 5.1.3.2</p> + <p>pmids: 191453,845161</p> + <p>GENE_ASSOCIATION: ENSG00000117308</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_093ee677-4ba5-4528-856e-60f371fedfe8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.1.3.2"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105057"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00291"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/UDPG4E"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/845161"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/191453"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000117308"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8768" metaid="_8bcb4fd6-2dbe-4ec7-a1ff-10766373c9c1" name="R_HMR_8768" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 1.1.1.271</p> + <p>metanetx.reaction: MNXR100108</p> + <p>kegg.reaction: R05692</p> + <p>bigg.reaction: GFUCS</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 1.1.1.271</p> + <p>GENE_ASSOCIATION: ENSG00000104522</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8bcb4fd6-2dbe-4ec7-a1ff-10766373c9c1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.271"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100108"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R05692"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GFUCS"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000104522"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01949c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01950c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4404" metaid="_53153327-0fb7-4573-bd62-024a6dbd9d90" name="R_HMR_4404" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:234468;PMID:2495942;PMID:2843500;PMID:3089282;PMID:5141430;PMID:7115375;PMID:7154948;PMID:9924800</p> + <p>ec-code: 2.2.1.1</p> + <p>metanetx.reaction: MNXR104869 || MNXR106812</p> + <p>kegg.reaction: R01067</p> + <p>bigg.reaction: TKT2</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.2.1.1</p> + <p>pmids: 234468,2495942,2843500,3089282,5141430,7115375,7154948,9924800</p> + <p>GENE_ASSOCIATION: ( ENSG00000007350 ) OR ( ENSG00000151005 ) OR ( ENSG00000163931 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_53153327-0fb7-4573-bd62-024a6dbd9d90"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.2.1.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104869"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106812"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01067"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TKT2"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2495942"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7115375"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/234468"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9924800"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5141430"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7154948"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3089282"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000163931"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000007350"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000151005"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01761c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01785c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4490" metaid="f0088831-0d71-400f-b3b3-78d25c47e1f4" name="R_HMR_4490" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:16906315;PMID:7061426;PMID:7150652;PMID:8717435</p> + <p>ec-code: 2.7.1.1</p> + <p>metanetx.reaction: MNXR95795</p> + <p>kegg.reaction: R01326</p> + <p>bigg.reaction: HEX4</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.1</p> + <p>pmids: 7061426,7150652,8717435,16906315</p> + <p>GENE_ASSOCIATION: ( ENSG00000156510 ) OR ( ENSG00000156515 ) OR ( ENSG00000159399 ) OR ( ENSG00000160883 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f0088831-0d71-400f-b3b3-78d25c47e1f4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR95795"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01326"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/HEX4"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7150652"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7061426"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16906315"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8717435"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000159399"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000160883"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156510"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156515"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02453c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02455c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4052" metaid="f3773fb2-a697-4ad0-b9c8-70f626e44da0" name="R_HMR_4052" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:11101685;PMID:7572345</p> + <p>ec-code: 2.7.6.1</p> + <p>metanetx.reaction: MNXR106802 || MNXR103215</p> + <p>kegg.reaction: R01049</p> + <p>bigg.reaction: PRPPS</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.6.1</p> + <p>pmids: 7572345,11101685</p> + <p>GENE_ASSOCIATION: ( ENSG00000101911 ) OR ( ENSG00000147224 ) OR ( ENSG00000229937 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f3773fb2-a697-4ad0-b9c8-70f626e44da0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.6.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106802"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103215"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01049"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PRPPS"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7572345"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/11101685"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000147224"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000229937"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000101911"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01334c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02806c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4130" metaid="a1e6f11c-2c01-45d7-aa41-39764568a681" name="R_HMR_4130" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.6</p> + <p>metanetx.reaction: MNXR99985</p> + <p>bigg.reaction: GALKr</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.6</p> + <p>GENE_ASSOCIATION: ( ENSG00000108479 ) OR ( ENSG00000156958 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a1e6f11c-2c01-45d7-aa41-39764568a681"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.6"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99985"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GALKr"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000108479"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156958"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01910c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01322c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8653" metaid="_22f2d06f-d7c0-4287-a929-46293b17c7af" name="R_HMR_8653" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 3.1.1.31</p> + <p>metanetx.reaction: MNXR99907</p> + <p>kegg.reaction: R10520</p> + <p>bigg.reaction: G6PDH2r</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 3.1.1.31</p> + <p>GENE_ASSOCIATION: ( ENSG00000049239 ) OR ( ENSG00000130313 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_22f2d06f-d7c0-4287-a929-46293b17c7af"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99907"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R10520"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2r"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000049239"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01961r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02553r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039r" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01968r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02552r" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4131" metaid="fba7f9cd-fa2b-4c7a-a4a5-02318cc57a68" name="R_HMR_4131" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.7.12</p> + <p>metanetx.reaction: MNXR105090</p> + <p>kegg.reaction: R00955</p> + <p>bigg.reaction: UGLT</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.7.12</p> + <p>GENE_ASSOCIATION: ENSG00000213930</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fba7f9cd-fa2b-4c7a-a4a5-02318cc57a68"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.12"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105090"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00955"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/UGLT"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000213930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01967c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01322c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4297" metaid="c5cf5503-7811-4ea5-b3d5-159879fdbf6a" name="R_HMR_4297" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:7506254;PMID:7688733</p> + <p>ec-code: 2.7.1.105</p> + <p>metanetx.reaction: MNXR102508</p> + <p>kegg.reaction: R00757</p> + <p>bigg.reaction: PFK26</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.105</p> + <p>pmids: 7506254,7688733</p> + <p>GENE_ASSOCIATION: ( ENSG00000114268 ) OR ( ENSG00000123836 ) OR ( ENSG00000158571 ) OR ( ENSG00000170525 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5cf5503-7811-4ea5-b3d5-159879fdbf6a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.105"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102508"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00757"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PFK26"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7688733"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7506254"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000123836"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000170525"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000114268"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000158571"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01843c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4132" metaid="_7fd1e0ad-5113-42aa-963e-6215ef481843" name="R_HMR_4132" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10993714</p> + <p>ec-code: 2.7.7.12</p> + <p>metanetx.reaction: MNXR105090</p> + <p>kegg.reaction: R00955</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.7.12</p> + <p>pmids: 10993714</p> + <p>GENE_ASSOCIATION: ENSG00000213930</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7fd1e0ad-5113-42aa-963e-6215ef481843"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.12"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105090"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00955"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10993714"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000213930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01911c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03108c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03107c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01967c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_0454" metaid="c76ba226-384c-4b57-84b2-6140f038c756" name="R_HMR_0454" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:12125098</p> + <p>ec-code: 2.7.1.28</p> + <p>metanetx.reaction: MNXR104940</p> + <p>kegg.reaction: R01059</p> + <p>bigg.reaction: TRIOK</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.28</p> + <p>pmids: 12125098</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c76ba226-384c-4b57-84b2-6140f038c756"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.28"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104940"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01059"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TRIOK"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12125098"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4774" metaid="_3d04496d-3c88-44ef-a0f4-1566551ef2a7" name="R_HMR_4774" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:131802;PMID:1810251;PMID:193556;PMID:2987258;PMID:6091737</p> + <p>ec-code: 2.7.1.11</p> + <p>metanetx.reaction: MNXR108039 || MNXR105355</p> + <p>kegg.reaction: R03237</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.11</p> + <p>pmids: 131802,193556,1810251,2987258,6091737</p> + <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d04496d-3c88-44ef-a0f4-1566551ef2a7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR108039"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105355"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03237"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/1810251"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6091737"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/193556"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2987258"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/131802"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01424c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02955c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01623c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4775" metaid="b71ca27b-2233-4904-bf68-12c5c97c9300" name="R_HMR_4775" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:131802;PMID:1810251</p> + <p>ec-code: 2.7.1.11</p> + <p>metanetx.reaction: MNXR105356 || MNXR108041</p> + <p>kegg.reaction: R03239</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.11</p> + <p>pmids: 131802,1810251</p> + <p>GENE_ASSOCIATION: ( ENSG00000067057 ) OR ( ENSG00000141959 ) OR ( ENSG00000152556 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b71ca27b-2233-4904-bf68-12c5c97c9300"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.11"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR105356"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR108041"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03239"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/1810251"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/131802"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000067057"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141959"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000152556"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02193c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01746c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02161c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02955c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4414" metaid="b4722a38-261b-454e-93b5-c84c4aa10035" name="R_HMR_4414" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:8908517</p> + <p>ec-code: 2.7.1.6</p> + <p>metanetx.reaction: MNXR99985</p> + <p>kegg.reaction: R01092</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.6</p> + <p>pmids: 8908517</p> + <p>GENE_ASSOCIATION: ( ENSG00000108479 ) OR ( ENSG00000156958 ) OR ( ENSG00000166262 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b4722a38-261b-454e-93b5-c84c4aa10035"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.6"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99985"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01092"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8908517"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000108479"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000156958"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000166262"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01910c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01911c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4415" metaid="_0e1118fe-ec5c-4f40-b7ba-0a043f91a0d0" name="R_HMR_4415" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:6786877</p> + <p>ec-code: 3.2.1.108 || 3.2.1.23</p> + <p>metanetx.reaction: MNXR101000</p> + <p>kegg.reaction: R01100</p> + <p>bigg.reaction: LACZe</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 3.2.1.23;3.2.1.108</p> + <p>pmids: 6786877</p> + <p>GENE_ASSOCIATION: ENSG00000115850 AND ENSG00000163521 AND ENSG00000170266 AND ENSG00000188167</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0e1118fe-ec5c-4f40-b7ba-0a043f91a0d0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.108"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.23"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101000"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01100"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/LACZe"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6786877"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="ENSG00000170266"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000163521"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000188167"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000115850"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02332s" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01910s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01965s" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4416" metaid="b1a0bbd3-03c8-481d-87b1-808aebb90ef2" name="R_HMR_4416" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:3569296</p> + <p>ec-code: 3.2.1.23 || 3.2.1.22</p> + <p>metanetx.reaction: MNXR100115</p> + <p>kegg.reaction: R01104</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 3.2.1.22;3.2.1.23</p> + <p>pmids: 3569296</p> + <p>GENE_ASSOCIATION: ( ENSG00000102393 ) OR ( ENSG00000170266 ) OR ( ENSG00000241343 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b1a0bbd3-03c8-481d-87b1-808aebb90ef2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.23"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.22"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100115"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01104"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3569296"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000102393"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000170266"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000241343"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01913s" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01910s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01983s" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_FBA5" metaid="f429561f-98d2-434a-860a-ddff29f21ebd" name="D-Tagatose 1-Phosphate D-Glyceraldehyde-3-Phosphate-Lyase" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:2996495,PMID:6284103,PMID:6298387</p> + <p>ec-code: 4.1.2.13</p> + <p>metanetx.reaction: MNXR99463</p> + <p>bigg.reaction: FBA5</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 4.1.2.13</p> + <p>pmids: 2996495,6284103,6298387</p> + <p>GENE_ASSOCIATION: ENSG00000136872</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f429561f-98d2-434a-860a-ddff29f21ebd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.13"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99463"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBA5"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2996495"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6298387"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6284103"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000136872"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tag1p_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01690c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_PGLc" metaid="_3648fd3f-6668-495c-b2e0-e7ce9105a0bd" name="6-Phosphogluconolactonase" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> + <p>ec-code: 3.1.1.31</p> + <p>bigg.reaction: PGLc</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 3.1.1.31</p> + <p>pmids: 4382012,13575411</p> + <p>GENE_ASSOCIATION: ENSG00000130313</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3648fd3f-6668-495c-b2e0-e7ce9105a0bd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PGLc"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m01961c" stoichiometry="3"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01169c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4383" metaid="_0ea26d9f-b8bd-4193-8626-31efb5856906" name="R_HMR_4383" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10571009;PMID:12231825;PMID:15033941;PMID:2085314;PMID:7702210;PMID:8381960</p> + <p>ec-code: 5.3.1.8</p> + <p>metanetx.reaction: MNXR106679 || MNXR101382</p> + <p>kegg.reaction: R00772</p> + <p>bigg.reaction: MAN6PI</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 5.3.1.8</p> + <p>pmids: 2085314,7702210,8381960,10571009,12231825,15033941</p> + <p>GENE_ASSOCIATION: ENSG00000178802</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ea26d9f-b8bd-4193-8626-31efb5856906"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.8"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106679"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101382"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00772"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/MAN6PI"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10571009"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15033941"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7702210"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8381960"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12231825"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2085314"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000178802"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02455c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_GNDc" metaid="ef163958-45f6-498d-acb0-0e2d72945b19" name="Phosphogluconate Dehydrogenase" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> + <p>ec-code: 1.1.1.44</p> + <p>bigg.reaction: GNDc</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.1.1.44</p> + <p>pmids: 4382012,13575411</p> + <p>GENE_ASSOCIATION: ENSG00000142657</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ef163958-45f6-498d-acb0-0e2d72945b19"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.44"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GNDc"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000142657"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01169c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m02554c" stoichiometry="3"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m01596c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4385" metaid="_83fb9834-0745-47d2-b88f-9cb966a0eefd" name="R_HMR_4385" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10593562;PMID:12889654;PMID:15361947</p> + <p>ec-code: 5.4.2.8</p> + <p>metanetx.reaction: MNXR101729</p> + <p>kegg.reaction: R01818</p> + <p>bigg.reaction: PMANM</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 5.4.2.8</p> + <p>pmids: 10593562,12889654,15361947</p> + <p>GENE_ASSOCIATION: ( ENSG00000100413 ) OR ( ENSG00000100417 ) OR ( ENSG00000140650 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83fb9834-0745-47d2-b88f-9cb966a0eefd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.8"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101729"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01818"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PMANM"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15361947"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12889654"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10593562"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000140650"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000100417"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000100413"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02455c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4386" metaid="_1b139dd2-60dd-4d29-b9db-c7cd0c97d62b" name="R_HMR_4386" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:13876695</p> + <p>ec-code: 2.7.7.13 || 2.7.7.22</p> + <p>metanetx.reaction: MNXR101376</p> + <p>kegg.reaction: R00883</p> + <p>bigg.reaction: MAN1PT2</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.7.22;2.7.7.13</p> + <p>pmids: 13876695</p> + <p>GENE_ASSOCIATION: ( ENSG00000144591 ) OR ( ENSG00000164068 ) OR ( ENSG00000173540 ) OR ( ENSG00000176020 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1b139dd2-60dd-4d29-b9db-c7cd0c97d62b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.13"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.22"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101376"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00883"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/MAN1PT2"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13876695"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000164068"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000176020"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000173540"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000144591"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01948c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01951c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02751c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_ABTD1" metaid="_030d6c02-c016-4e4d-a3a0-100f8b573715" name="L-Arabinitol 4-Dehydrogenase" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID: 16435225</p> + <p>ec-code: 3.1.1.4</p> + <p>bigg.reaction: ABTD1</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 3.1.1.4</p> + <p>pmids: 16435225</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_030d6c02-c016-4e4d-a3a0-100f8b573715"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.4"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/ABTD1"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16435225"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <listOfReactants> + <speciesReference constant="true" species="M_m02552c" stoichiometry="1"/> + <speciesReference constant="true" species="M_abt_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02553c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02425c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4387" metaid="_642e9305-23e4-4e3a-b6ef-fe32f9051987" name="R_HMR_4387" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10025667;PMID:8549746;PMID:9451026</p> + <p>ec-code: 2.7.7.13</p> + <p>metanetx.reaction: MNXR101375</p> + <p>kegg.reaction: R00885</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.7.13</p> + <p>pmids: 8549746,9451026,10025667</p> + <p>GENE_ASSOCIATION: ( ENSG00000144591 ) OR ( ENSG00000173540 ) OR ( ENSG00000176020 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_642e9305-23e4-4e3a-b6ef-fe32f9051987"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.7.13"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR101375"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00885"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8549746"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9451026"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10025667"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000176020"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000173540"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000144591"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02454c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02034c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01951c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02759c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_9799" metaid="_57352ce2-7ff7-4510-8c37-fe046275ab37" name="R_HMR_9799" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.14</p> + <p>metanetx.reaction: MNXR107202</p> + <p>kegg.reaction: R01844</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.14</p> + <p>GENE_ASSOCIATION: ENSG00000197417</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_57352ce2-7ff7-4510-8c37-fe046275ab37"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.14"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107202"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01844"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000197417"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03165c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4303" metaid="_073189d4-50c2-4cf1-b826-23bdb07507f8" name="R_HMR_4303" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:12055199</p> + <p>ec-code: 3.2.1.48 || 3.2.1.10 || 3.2.1.20</p> + <p>metanetx.reaction: MNXR104638</p> + <p>kegg.reaction: R00801</p> + <p>bigg.reaction: SUCRe</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 3.2.1.10;3.2.1.20;3.2.1.48</p> + <p>pmids: 12055199</p> + <p>GENE_ASSOCIATION: ( ENSG00000090402 ) OR ( ENSG00000171298 ) OR ( ENSG00000214013 ) OR ( ENSG00000257335 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_073189d4-50c2-4cf1-b826-23bdb07507f8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.48"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.10"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.2.1.20"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104638"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00801"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/SUCRe"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12055199"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000171298"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000257335"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000090402"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000214013"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02945s" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01965s" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01840s" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4501" metaid="_94343e1c-c62d-4149-953b-237ef55a08ca" name="R_HMR_4501" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:13385248;PMID:2495942;UNIPROT:P29401</p> + <p>ec-code: 2.2.1.1</p> + <p>metanetx.reaction: MNXR107105 || MNXR104868</p> + <p>kegg.reaction: R01641</p> + <p>bigg.reaction: TKT1</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.2.1.1</p> + <p>pmids: 2495942,13385248</p> + <p>GENE_ASSOCIATION: ( ENSG00000007350 ) OR ( ENSG00000151005 ) OR ( ENSG00000163931 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94343e1c-c62d-4149-953b-237ef55a08ca"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.2.1.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR107105"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104868"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01641"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/TKT1"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2495942"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13385248"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000163931"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000007350"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000151005"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01761c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02884c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4304" metaid="_4a19056f-9291-4536-aee2-1f674e94327c" name="R_HMR_4304" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:15774558;PMID:16756494;PMID:2753047;PMID:4169027</p> + <p>ec-code: 1.1.1.49</p> + <p>metanetx.reaction: MNXR99907</p> + <p>kegg.reaction: R00835</p> + <p>bigg.reaction: G6PDH2er</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.1.1.49</p> + <p>pmids: 2753047,4169027,15774558,16756494</p> + <p>GENE_ASSOCIATION: ENSG00000160211</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a19056f-9291-4536-aee2-1f674e94327c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.49"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99907"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00835"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2er"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4169027"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15774558"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000160211"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01968r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02554r" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01961r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039r" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4623" metaid="_977981ea-549f-4af8-8bc9-8f06a599033d" name="R_HMR_4623" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:3858849;PMID:3932573;PMID:6852020;PMID:971315</p> + <p>ec-code: 3.1.1.31</p> + <p>metanetx.reaction: MNXR102539</p> + <p>kegg.reaction: R02035</p> + <p>bigg.reaction: PGLer</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 3.1.1.31</p> + <p>pmids: 971315,3858849,3932573,6852020</p> + <p>GENE_ASSOCIATION: ( ENSG00000049239 ) OR ( ENSG00000130313 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_977981ea-549f-4af8-8bc9-8f06a599033d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102539"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02035"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PGLer"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3932573"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3858849"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6852020"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/971315"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000049239"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01961r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02040r" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01169r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039r" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4306" metaid="c51de190-dee0-491f-93ed-9eebe9f571ff" name="R_HMR_4306" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:15774558;PMID:16756494;PMID:2753047;PMID:4169027</p> + <p>ec-code: 1.1.1.49</p> + <p>metanetx.reaction: MNXR99907</p> + <p>kegg.reaction: R00835</p> + <p>bigg.reaction: G6PDH2r</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.1.1.49</p> + <p>pmids: 2753047,4169027,15774558,16756494</p> + <p>GENE_ASSOCIATION: ENSG00000160211</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c51de190-dee0-491f-93ed-9eebe9f571ff"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.49"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99907"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00835"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2r"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4169027"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15774558"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000160211"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01961c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01968c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4625" metaid="ce25ac8c-d5cd-45bf-aa0f-b5091cc8f920" name="R_HMR_4625" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:3858849;PMID:3932573;PMID:6852020;PMID:971315</p> + <p>ec-code: 3.1.1.31</p> + <p>metanetx.reaction: MNXR102539</p> + <p>kegg.reaction: R02035</p> + <p>bigg.reaction: PGL</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 3.1.1.31</p> + <p>pmids: 971315,3858849,3932573,6852020</p> + <p>GENE_ASSOCIATION: ( ENSG00000049239 ) OR ( ENSG00000130313 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ce25ac8c-d5cd-45bf-aa0f-b5091cc8f920"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.1.31"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR102539"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02035"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PGL"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3932573"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3858849"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6852020"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/971315"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000049239"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000130313"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01961c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01169c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4706" metaid="_76f44f32-e827-409c-9f89-d39564cf363b" name="R_HMR_4706" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:11245921;PMID:12379646;PMID:15170386;PMID:15581487;PMID:16316985;PMID:2837207</p> + <p>ec-code: 3.1.3.46 || 3.1.3.11</p> + <p>metanetx.reaction: MNXR106671 || MNXR99466</p> + <p>kegg.reaction: R00763</p> + <p>bigg.reaction: FBP26</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 3.1.3.46;3.1.3.11</p> + <p>pmids: 2837207,11245921,12379646,15170386,15581487,16316985</p> + <p>GENE_ASSOCIATION: ( ENSG00000078237 ) OR ( ENSG00000108813 ) OR ( ENSG00000114268 ) OR ( ENSG00000123836 ) OR ( ENSG00000158571 ) OR ( ENSG00000170525 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76f44f32-e827-409c-9f89-d39564cf363b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.3.46"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/3.1.3.11"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106671"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99466"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00763"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBP26"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16316985"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12379646"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15581487"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15170386"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/11245921"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2837207"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000123836"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000170525"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000108813"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000158571"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000078237"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000114268"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01843c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02751c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01845c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_G6PDH2c" metaid="_65f65765-bf14-48a2-8308-72aa949d0dd7" name="Glucose 6-Phosphate Dehydrogenase" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID: 4382012, PMID: 13575411, Harpers illustrated Biochemistry (2009) 28th edition pages 174-183</p> + <p>bigg.reaction: G6PDH2c</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>pmids: 4382012,13575411</p> + <p>GENE_ASSOCIATION: ENSG00000160211</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_65f65765-bf14-48a2-8308-72aa949d0dd7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/G6PDH2c"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13575411"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4382012"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000160211"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02554c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m01968c" stoichiometry="3"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01961c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="3"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_8074" metaid="c6249ea1-2eba-44b9-b389-c3bb870070af" name="R_HMR_8074" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.15</p> + <p>metanetx.reaction: MNXR97787</p> + <p>kegg.reaction: R02750</p> + <p>bigg.reaction: DRPA</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.15</p> + <p>GENE_ASSOCIATION: ( ENSG00000158019 ) OR ( ENSG00000171174 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c6249ea1-2eba-44b9-b389-c3bb870070af"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.15"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR97787"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02750"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/DRPA"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000171174"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000158019"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01672c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m00640c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4350" metaid="cd869f58-5452-4226-8cfe-b859d4054a8f" name="R_HMR_4350" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:13295274;PMID:17618002</p> + <p>ec-code: 2.7.1.15</p> + <p>metanetx.reaction: MNXR106804 || MNXR103431</p> + <p>kegg.reaction: R01051</p> + <p>bigg.reaction: RBK</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.15</p> + <p>pmids: 13295274,17618002</p> + <p>GENE_ASSOCIATION: ( ENSG00000158019 ) OR ( ENSG00000171174 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd869f58-5452-4226-8cfe-b859d4054a8f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.15"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106804"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103431"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01051"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RBK"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/13295274"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/17618002"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000171174"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000158019"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02843c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_KHK3" metaid="_2f83a279-1e91-4c20-ab35-0fbd94c31885" name="Ketohexokinase (D-Tagatose)" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:2996495,PMID:6284103,PMID:6298387</p> + <p>ec-code: 2.7.1.3</p> + <p>metanetx.reaction: MNXR100938</p> + <p>bigg.reaction: KHK3</p> + <p>SUBSYSTEM: Galactose metabolism</p> + <p>EC_NUMBER: 2.7.1.3</p> + <p>pmids: 2996495,6284103,6298387</p> + <p>GENE_ASSOCIATION: ENSG00000138030</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2f83a279-1e91-4c20-ab35-0fbd94c31885"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100938"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/KHK3"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2996495"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6298387"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6284103"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01745c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tag1p_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4351" metaid="_6bfc4346-8d59-4fd8-af6b-41405b4de8a1" name="R_HMR_4351" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:14690456;PMID:14988808;PMID:15234337;PMID:2843500</p> + <p>ec-code: 5.3.1.6</p> + <p>metanetx.reaction: MNXR104084 || MNXR106809</p> + <p>kegg.reaction: R01056</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.3.1.6</p> + <p>pmids: 2843500,14690456,14988808,15234337</p> + <p>GENE_ASSOCIATION: ENSG00000153574</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6bfc4346-8d59-4fd8-af6b-41405b4de8a1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.6"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104084"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106809"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01056"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/14690456"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/14988808"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000153574"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02845r" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846r" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4473" metaid="c7c1f092-4aea-48a2-8d25-feb3f47ea431" name="R_HMR_4473" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:12398160;PMID:1504088;PMID:15558954;PMID:16756494;PMID:2753047;PMID:3943305;PMID:6212636;PMID:7194116;PMID:7225115;PMID:7623792</p> + <p>ec-code: 1.1.1.44</p> + <p>metanetx.reaction: MNXR100389</p> + <p>kegg.reaction: R01528</p> + <p>bigg.reaction: GNDer</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.1.1.44</p> + <p>pmids: 1504088,2753047,3943305,6212636,7194116,7225115,7623792,12398160,15558954,16756494</p> + <p>GENE_ASSOCIATION: ENSG00000142657</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c7c1f092-4aea-48a2-8d25-feb3f47ea431"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.44"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100389"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01528"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GNDer"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6212636"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7623792"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3943305"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7225115"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15558954"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7194116"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12398160"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/1504088"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000142657"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01169r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02554r" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555r" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01596r" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4352" metaid="be77e7e9-9978-4d8f-9533-2dd900d0bde5" name="R_HMR_4352" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:14690456;PMID:14988808;PMID:15234337;PMID:2843500</p> + <p>ec-code: 5.3.1.6</p> + <p>metanetx.reaction: MNXR104084 || MNXR106809</p> + <p>kegg.reaction: R01056</p> + <p>bigg.reaction: RPI</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.3.1.6</p> + <p>pmids: 2843500,14690456,14988808,15234337</p> + <p>GENE_ASSOCIATION: ENSG00000153574</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#be77e7e9-9978-4d8f-9533-2dd900d0bde5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.3.1.6"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104084"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106809"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01056"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RPI"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/14690456"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/14988808"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000153574"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4474" metaid="_83d5dfd1-ca06-416b-8f50-068a6b157458" name="R_HMR_4474" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:12398160;PMID:1504088;PMID:15558954;PMID:16756494;PMID:2753047;PMID:3943305;PMID:6212636;PMID:7194116;PMID:7225115;PMID:7623792</p> + <p>ec-code: 1.1.1.44</p> + <p>metanetx.reaction: MNXR100389</p> + <p>kegg.reaction: R01528</p> + <p>bigg.reaction: GND</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 1.1.1.44</p> + <p>pmids: 1504088,2753047,3943305,6212636,7194116,7225115,7623792,12398160,15558954,16756494</p> + <p>GENE_ASSOCIATION: ENSG00000142657</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83d5dfd1-ca06-416b-8f50-068a6b157458"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/1.1.1.44"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100389"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01528"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GND"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/16756494"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6212636"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7623792"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3943305"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7225115"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15558954"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7194116"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/12398160"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2753047"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/1504088"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000142657"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01169c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02554c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02555c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01596c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_9800" metaid="_329c99c1-064e-4527-a8da-785581323147" name="R_HMR_9800" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>ec-code: 2.7.1.3</p> + <p>metanetx.reaction: MNXR108451</p> + <p>kegg.reaction: R03819</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.7.1.3</p> + <p>GENE_ASSOCIATION: ENSG00000138030</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_329c99c1-064e-4527-a8da-785581323147"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR108451"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R03819"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m03165c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m03166c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4398" metaid="c2e9d022-c156-4c88-a796-2bc148714535" name="R_HMR_4398" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:4989681;PMID:9226884</p> + <p>ec-code: 4.1.2.4</p> + <p>metanetx.reaction: MNXR97787</p> + <p>kegg.reaction: R01066</p> + <p>bigg.reaction: DRPA</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 4.1.2.4</p> + <p>pmids: 4989681,9226884</p> + <p>GENE_ASSOCIATION: ENSG00000023697</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c2e9d022-c156-4c88-a796-2bc148714535"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.4"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR97787"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01066"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/DRPA"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9226884"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/4989681"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000023697"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m00640c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01939c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01249c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4354" metaid="f7108fb4-b7e5-49a3-ada1-a6024a22b77c" name="R_HMR_4354" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:14953458;PMID:3023765;PMID:5769188;PMID:8050998</p> + <p>ec-code: 5.4.2.2 || 5.4.2.7</p> + <p>metanetx.reaction: MNXR106810 || MNXR103115</p> + <p>kegg.reaction: R01057</p> + <p>bigg.reaction: PPM</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.4.2.2;5.4.2.7</p> + <p>pmids: 3023765,5769188,8050998,14953458</p> + <p>GENE_ASSOCIATION: ( ENSG00000079739 ) OR ( ENSG00000169299 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f7108fb4-b7e5-49a3-ada1-a6024a22b77c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.2"/> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.4.2.7"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR106810"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR103115"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01057"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/PPM"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/14953458"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/3023765"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5769188"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/8050998"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000169299"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000079739"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m02844c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02845c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4310" metaid="_9239b4c7-a967-4956-b094-a7de9aff2cba" name="R_HMR_4310" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:2996495;PMID:7833921</p> + <p>ec-code: 2.7.1.3</p> + <p>metanetx.reaction: MNXR100936</p> + <p>kegg.reaction: R00866</p> + <p>bigg.reaction: KHK</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 2.7.1.3</p> + <p>pmids: 2996495,7833921</p> + <p>GENE_ASSOCIATION: ENSG00000138030</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9239b4c7-a967-4956-b094-a7de9aff2cba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.7.1.3"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100936"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00866"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/KHK"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2996495"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/7833921"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000138030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01840c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01842c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4476" metaid="_9560c25f-9d92-4a3c-bfbb-374877a611c3" name="R_HMR_4476" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:10978316</p> + <p>ec-code: 2.3.1.57</p> + <p>metanetx.reaction: MNXR100390</p> + <p>kegg.reaction: R01737</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 2.3.1.57</p> + <p>pmids: 10978316</p> + <p>GENE_ASSOCIATION: ( ENSG00000130066 ) OR ( ENSG00000141504 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9560c25f-9d92-4a3c-bfbb-374877a611c3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/2.3.1.57"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100390"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01737"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/10978316"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000141504"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000130066"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01169c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m02039c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01285c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01371c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01683c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4399" metaid="_961e9144-e77b-430b-8dd8-8001acf778ea" name="R_HMR_4399" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:9893952</p> + <p>ec-code: 4.2.1.47</p> + <p>metanetx.reaction: MNXR100377</p> + <p>kegg.reaction: R00888</p> + <p>bigg.reaction: GMAND</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 4.2.1.47</p> + <p>pmids: 9893952</p> + <p>GENE_ASSOCIATION: ENSG00000112699</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_961e9144-e77b-430b-8dd8-8001acf778ea"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/4.2.1.47"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR100377"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R00888"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/GMAND"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/9893952"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="ENSG00000112699"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01951c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02040c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01949c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_1000_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4477" metaid="_44d922a9-9c8a-409b-b662-408d43f39b21" name="R_HMR_4477" reversible="true" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:15234337;PMID:234468;PMID:2843500</p> + <p>ec-code: 5.1.3.1</p> + <p>metanetx.reaction: MNXR104083</p> + <p>kegg.reaction: R01529</p> + <p>bigg.reaction: RPE</p> + <p>SUBSYSTEM: Pentose phosphate pathway</p> + <p>EC_NUMBER: 5.1.3.1</p> + <p>pmids: 234468,2843500,15234337</p> + <p>GENE_ASSOCIATION: ( ENSG00000197713 ) OR ( ENSG00000235376 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_44d922a9-9c8a-409b-b662-408d43f39b21"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/5.1.3.1"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR104083"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R01529"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/RPE"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/234468"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/2843500"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/15234337"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000197713"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000235376"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01761c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m02846c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_1000_0" id="R_HMR_4356" metaid="e6efa094-5aeb-412c-8390-f6707d0794e0" name="R_HMR_4356" reversible="false" sboTerm="SBO:0000176"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>Confidence Level: 0</p> + <p>AUTHORS: PMID:5114731;PMID:5655259;PMID:6054986</p> + <p>ec-code: 4.1.2.13</p> + <p>metanetx.reaction: MNXR99460</p> + <p>kegg.reaction: R02568</p> + <p>bigg.reaction: FBA2</p> + <p>SUBSYSTEM: Fructose and mannose metabolism</p> + <p>EC_NUMBER: 4.1.2.13</p> + <p>pmids: 5114731,5655259,6054986</p> + <p>GENE_ASSOCIATION: ( ENSG00000109107 ) OR ( ENSG00000136872 ) OR ( ENSG00000149925 ) OR ( ENSG00000285043 )</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e6efa094-5aeb-412c-8390-f6707d0794e0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/ec-code/4.1.2.13"/> + <rdf:li rdf:resource="https://identifiers.org/metanetx.reaction/MNXR99460"/> + <rdf:li rdf:resource="https://identifiers.org/kegg.reaction/R02568"/> + <rdf:li rdf:resource="https://identifiers.org/bigg.reaction/FBA2"/> + </rdf:Bag> + </bqbiol:is> + <bqbiol:isDescribedBy> + <rdf:Bag> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5114731"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/6054986"/> + <rdf:li rdf:resource="https://identifiers.org/pubmed/5655259"/> + </rdf:Bag> + </bqbiol:isDescribedBy> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="ENSG00000136872"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000149925"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000109107"/> + <fbc:geneProductRef fbc:geneProduct="ENSG00000285043"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_m01690c" stoichiometry="1"/> + <speciesReference constant="true" species="M_m01981c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_m01842c" stoichiometry="1"/> + </listOfProducts> + </reaction> + </listOfReactions> + </model> +</sbml>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tools/convert/SBMLwizard/test-data/XF_network.sbml Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,47267 @@ +<?xml version="1.0" encoding="UTF-8"?> +<sbml fbc:required="false" groups:required="false" level="3" version="2" xmlns="http://www.sbml.org/sbml/level3/version2/core" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1"> + <model fbc:strict="true" id="Xfm1158" metaid="Xfm1158" name="Xfm1158"> + <fbc:listOfGeneProducts> + <fbc:geneProduct fbc:id="XFCFBP8418_007090" fbc:label="XFCFBP8418_007090" fbc:name="XFCFBP8418_007090" metaid="_8a7d7180-d79e-4dbb-86ed-f8d7eb60e698"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005900" fbc:label="XFCFBP8418_005900" fbc:name="XFCFBP8418_005900" metaid="_867487dd-ff57-4e93-8de9-b5ecb805e0eb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011590" fbc:label="XFCFBP8418_011590" fbc:name="XFCFBP8418_011590" metaid="_44606760-936c-4585-b40c-650e953a5f73"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014620" fbc:label="XFCFBP8418_014620" fbc:name="XFCFBP8418_014620" metaid="da273da9-0f84-4615-a464-2ab71416e8cc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015830" fbc:label="XFCFBP8418_015830" fbc:name="XFCFBP8418_015830" metaid="_3a9239a2-8e23-4834-99a8-a7dc15f6d906"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014980" fbc:label="XFCFBP8418_014980" fbc:name="XFCFBP8418_014980" metaid="_7f26806b-e32e-4c5c-a78d-9e094c267bbf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020190" fbc:label="XFCFBP8418_020190" fbc:name="XFCFBP8418_020190" metaid="_31bbb514-1d52-4727-91cb-367af12e95ca"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004940" fbc:label="XFCFBP8418_004940" fbc:name="XFCFBP8418_004940" metaid="a2f20753-c245-477e-8363-8f5e45c50f5d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021160" fbc:label="XFCFBP8418_021160" fbc:name="XFCFBP8418_021160" metaid="_844bdacc-d091-457d-9c4d-846cb9aab3c1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025760" fbc:label="XFCFBP8418_025760" fbc:name="XFCFBP8418_025760" metaid="fd8a601e-e56f-4263-9aa7-6ed9bf85f958"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024670" fbc:label="XFCFBP8418_024670" fbc:name="XFCFBP8418_024670" metaid="_2bbe03ce-c814-417a-b9c0-e8a1f29f4106"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004820" fbc:label="XFCFBP8418_004820" fbc:name="XFCFBP8418_004820" metaid="_41cb6d94-13d8-461e-a217-29a68e21cd2b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023580" fbc:label="XFCFBP8418_023580" fbc:name="XFCFBP8418_023580" metaid="_31ff72d7-4e30-4563-85aa-4afc58dd6bee"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000460" fbc:label="XFCFBP8418_000460" fbc:name="XFCFBP8418_000460" metaid="d7ea14e6-cd6c-4404-b973-486ade662242"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026730" fbc:label="XFCFBP8418_026730" fbc:name="XFCFBP8418_026730" metaid="e876348e-787e-4f2a-8904-e675c2589c17"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025640" fbc:label="XFCFBP8418_025640" fbc:name="XFCFBP8418_025640" metaid="b5b93812-bd2e-4ca8-8328-e1d35e17ac3a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023100" fbc:label="XFCFBP8418_023100" fbc:name="XFCFBP8418_023100" metaid="f62e0096-7b12-4db3-a7b0-2e1cfa0302c6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027800" fbc:label="XFCFBP8418_027800" fbc:name="XFCFBP8418_027800" metaid="_8beb93ba-34a4-4330-86bf-2c47b1cb7f2e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004700" fbc:label="XFCFBP8418_004700" fbc:name="XFCFBP8418_004700" metaid="_2aceabe8-5294-42eb-9d3b-2506634c68d5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005910" fbc:label="XFCFBP8418_005910" fbc:name="XFCFBP8418_005910" metaid="a7b44241-024e-49c1-88af-1e1108cf09eb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013540" fbc:label="XFCFBP8418_013540" fbc:name="XFCFBP8418_013540" metaid="_83bdba7b-0eb0-4dfb-99ed-6e365240d870"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011240" fbc:label="XFCFBP8418_011240" fbc:name="XFCFBP8418_011240" metaid="_568b9959-99b6-49bd-86d7-04e773d940da"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012210" fbc:label="XFCFBP8418_012210" fbc:name="XFCFBP8418_012210" metaid="_23f706bb-7ef8-44ad-9ca8-41984c2dce7d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010390" fbc:label="XFCFBP8418_010390" fbc:name="XFCFBP8418_010390" metaid="d0d39b07-b3e7-42c7-bf5e-7b40253b22df"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005920" fbc:label="XFCFBP8418_005920" fbc:name="XFCFBP8418_005920" metaid="_5d489210-a636-4233-9352-ea58685a9656"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022360" fbc:label="XFCFBP8418_022360" fbc:name="XFCFBP8418_022360" metaid="_0a90d8d2-093e-48f7-b9fa-67c5d957fdd7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002650" fbc:label="XFCFBP8418_002650" fbc:name="XFCFBP8418_002650" metaid="b1dca6ff-07cd-484d-930b-b580a9968327"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001440" fbc:label="XFCFBP8418_001440" fbc:name="XFCFBP8418_001440" metaid="b8f8ee5b-a2d2-4a4d-8cfe-46fa4d831bab"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003500" fbc:label="XFCFBP8418_003500" fbc:name="XFCFBP8418_003500" metaid="d8165256-ceb8-458a-92a1-eb77924e963f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022240" fbc:label="XFCFBP8418_022240" fbc:name="XFCFBP8418_022240" metaid="b6b55b69-82f1-46f1-a523-fb6f2548ff30"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004950" fbc:label="XFCFBP8418_004950" fbc:name="XFCFBP8418_004950" metaid="_93bd6dfb-a354-45d5-8860-8c53f60fec10"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001200" fbc:label="XFCFBP8418_001200" fbc:name="XFCFBP8418_001200" metaid="_1b79d702-bdbd-4c3b-b4fe-d018a40724dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003740" fbc:label="XFCFBP8418_003740" fbc:name="XFCFBP8418_003740" metaid="_6d285f1c-cc1b-496d-809a-8745d784622d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002410" fbc:label="XFCFBP8418_002410" fbc:name="XFCFBP8418_002410" metaid="ae1cafff-6828-4ba6-ac3c-74d917a6c9bf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021150" fbc:label="XFCFBP8418_021150" fbc:name="XFCFBP8418_021150" metaid="_104ebe94-6090-484f-a178-f023a047949b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003980" fbc:label="XFCFBP8418_003980" fbc:name="XFCFBP8418_003980" metaid="_56d2c8a6-ab95-45b5-b867-c5ed340ae795"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026720" fbc:label="XFCFBP8418_026720" fbc:name="XFCFBP8418_026720" metaid="a0a57601-57b4-407f-b3a8-eb451093c528"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025630" fbc:label="XFCFBP8418_025630" fbc:name="XFCFBP8418_025630" metaid="ec323b50-c5ce-4b1c-8d32-997cc14df53a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022120" fbc:label="XFCFBP8418_022120" fbc:name="XFCFBP8418_022120" metaid="_5e39afe7-114c-45c9-8230-63a54558ca2c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001680" fbc:label="XFCFBP8418_001680" fbc:name="XFCFBP8418_001680" metaid="_56f21c8d-a2da-4095-b76f-62ba3b7bc4c5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012220" fbc:label="XFCFBP8418_012220" fbc:name="XFCFBP8418_012220" metaid="c6dc37d0-3831-45ca-ace8-8281e99e1acc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011250" fbc:label="XFCFBP8418_011250" fbc:name="XFCFBP8418_011250" metaid="ba9794ea-f15b-40da-b888-20adb293656e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017910" fbc:label="XFCFBP8418_017910" fbc:name="XFCFBP8418_017910" metaid="_8406f6bb-cf99-4429-b21c-de23d8daf0b6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011490" fbc:label="XFCFBP8418_011490" fbc:name="XFCFBP8418_011490" metaid="_0774d6db-8dbe-4cf2-9d77-e3cbb1ef1dc9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012340" fbc:label="XFCFBP8418_012340" fbc:name="XFCFBP8418_012340" metaid="_6542b3ae-24bb-4bf0-bae9-b01252632fd1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014880" fbc:label="XFCFBP8418_014880" fbc:name="XFCFBP8418_014880" metaid="_1a321a47-a80c-4dae-b371-e5edc0ce7eb9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021180" fbc:label="XFCFBP8418_021180" fbc:name="XFCFBP8418_021180" metaid="d3138cd5-c6ef-4a4b-8b84-e4507850433d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017900" fbc:label="XFCFBP8418_017900" fbc:name="XFCFBP8418_017900" metaid="f547d9c3-d437-4897-9641-39a61694c680"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026750" fbc:label="XFCFBP8418_026750" fbc:name="XFCFBP8418_026750" metaid="ddc6919f-69c1-486a-a9a4-00c1961033a0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003510" fbc:label="XFCFBP8418_003510" fbc:name="XFCFBP8418_003510" metaid="_38b2c686-2fa8-4d6a-bddf-91f712349bbe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027840" fbc:label="XFCFBP8418_027840" fbc:name="XFCFBP8418_027840" metaid="_25bc2b48-319c-4ba1-a3f6-7bbed8f11fc9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025660" fbc:label="XFCFBP8418_025660" fbc:name="XFCFBP8418_025660" metaid="d7554927-39af-47c3-a9b1-1587a1a11af3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027720" fbc:label="XFCFBP8418_027720" fbc:name="XFCFBP8418_027720" metaid="_3fe476a7-4217-45c3-9847-a4914c3b7f83"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023120" fbc:label="XFCFBP8418_023120" fbc:name="XFCFBP8418_023120" metaid="dadc7004-890a-484a-84b9-4865f25c9bea"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024570" fbc:label="XFCFBP8418_024570" fbc:name="XFCFBP8418_024570" metaid="_1f7b5fd5-e828-44ef-a16d-f1f2c0e68ef9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003630" fbc:label="XFCFBP8418_003630" fbc:name="XFCFBP8418_003630" metaid="_328f5206-efe3-4491-a97c-491c67753051"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024690" fbc:label="XFCFBP8418_024690" fbc:name="XFCFBP8418_024690" metaid="_1f0f8dc0-c7ac-4402-8b33-0de82d824edb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001690" fbc:label="XFCFBP8418_001690" fbc:name="XFCFBP8418_001690" metaid="_5ef6c37c-bc5c-4ad9-b5d5-75fe190ed7dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003990" fbc:label="XFCFBP8418_003990" fbc:name="XFCFBP8418_003990" metaid="_0a0e2047-eac0-4c69-a594-f0e3b3096dfb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023000" fbc:label="XFCFBP8418_023000" fbc:name="XFCFBP8418_023000" metaid="_89ac02cf-5904-4e5f-91ac-0ab1190b4a9c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017920" fbc:label="XFCFBP8418_017920" fbc:name="XFCFBP8418_017920" metaid="_6d308aa9-0ba4-4d37-adbb-33aa908e3e48"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017800" fbc:label="XFCFBP8418_017800" fbc:name="XFCFBP8418_017800" metaid="_39151657-7807-4cd1-900a-708c0805f914"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011260" fbc:label="XFCFBP8418_011260" fbc:name="XFCFBP8418_011260" metaid="f672e34e-32b0-4900-8e31-6d68ed420bd0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011380" fbc:label="XFCFBP8418_011380" fbc:name="XFCFBP8418_011380" metaid="a724c53f-7214-4d85-9215-491d72b53228"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014890" fbc:label="XFCFBP8418_014890" fbc:name="XFCFBP8418_014890" metaid="_2f7b26c7-3b99-46c9-9f12-addb9f9c1316"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012590" fbc:label="XFCFBP8418_012590" fbc:name="XFCFBP8418_012590" metaid="_303aa788-bfa4-4adc-92e0-0a619d17037f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012350" fbc:label="XFCFBP8418_012350" fbc:name="XFCFBP8418_012350" metaid="_8a24f528-f805-4c77-b8c5-df6e24928d62"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015860" fbc:label="XFCFBP8418_015860" fbc:name="XFCFBP8418_015860" metaid="_099edf7c-1eed-4be9-bc51-e4263fe9f90f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014650" fbc:label="XFCFBP8418_014650" fbc:name="XFCFBP8418_014650" metaid="_2e1ea636-c3b9-4109-8df0-be251373756f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025650" fbc:label="XFCFBP8418_025650" fbc:name="XFCFBP8418_025650" metaid="d3af8b3f-fd1c-45cb-bc9c-e509b1f54971"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001100" fbc:label="XFCFBP8418_001100" fbc:name="XFCFBP8418_001100" metaid="a74d870f-bde4-44c6-b763-ec6c5999482a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003400" fbc:label="XFCFBP8418_003400" fbc:name="XFCFBP8418_003400" metaid="_2480b1d5-5a1b-4867-a3fd-6c18fe04b5dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002430" fbc:label="XFCFBP8418_002430" fbc:name="XFCFBP8418_002430" metaid="_5326d2ff-3c06-4c5f-a968-d1f1396c4852"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027830" fbc:label="XFCFBP8418_027830" fbc:name="XFCFBP8418_027830" metaid="_707608ac-e418-46f0-8cc6-ffee051a99da"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023590" fbc:label="XFCFBP8418_023590" fbc:name="XFCFBP8418_023590" metaid="f9cd8480-632c-4e88-902c-6b3aec751592"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024680" fbc:label="XFCFBP8418_024680" fbc:name="XFCFBP8418_024680" metaid="f5e73250-5467-49aa-aadb-8c8d48c36ea5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005940" fbc:label="XFCFBP8418_005940" fbc:name="XFCFBP8418_005940" metaid="c9d9e5e9-74f6-4879-97bd-3f334f856d47"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003880" fbc:label="XFCFBP8418_003880" fbc:name="XFCFBP8418_003880" metaid="ff6ca9e3-0135-45ca-b276-463a698bbc99"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023110" fbc:label="XFCFBP8418_023110" fbc:name="XFCFBP8418_023110" metaid="_0e6c132a-bdca-464b-bb03-3ed95724ae8a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025410" fbc:label="XFCFBP8418_025410" fbc:name="XFCFBP8418_025410" metaid="f7c9264f-e91b-4bf7-a725-65452feba723"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026740" fbc:label="XFCFBP8418_026740" fbc:name="XFCFBP8418_026740" metaid="_37512ad2-5300-4a06-8581-f9fb27c0a613"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014300" fbc:label="XFCFBP8418_014300" fbc:name="XFCFBP8418_014300" metaid="_0da1f0b5-fa04-4844-afd9-5fa97f54340e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011030" fbc:label="XFCFBP8418_011030" fbc:name="XFCFBP8418_011030" metaid="_3817e00f-f5de-4bfc-b848-14bb36598c0e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017930" fbc:label="XFCFBP8418_017930" fbc:name="XFCFBP8418_017930" metaid="d3441fd2-9237-464d-b259-63929d173dbe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012360" fbc:label="XFCFBP8418_012360" fbc:name="XFCFBP8418_012360" metaid="_70635c18-c4b5-40a4-8d09-c4f090874bd6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014540" fbc:label="XFCFBP8418_014540" fbc:name="XFCFBP8418_014540" metaid="dc8e17e7-3edc-44bc-be7d-c96b76e9bb03"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022170" fbc:label="XFCFBP8418_022170" fbc:name="XFCFBP8418_022170" metaid="d9a3b42d-d3f1-49d9-ad08-4535bc0b83a7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021080" fbc:label="XFCFBP8418_021080" fbc:name="XFCFBP8418_021080" metaid="_66552558-fa69-412d-924d-633ed8a3bab9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023020" fbc:label="XFCFBP8418_023020" fbc:name="XFCFBP8418_023020" metaid="_032c5212-a731-40bc-bb3b-056200b672fc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025320" fbc:label="XFCFBP8418_025320" fbc:name="XFCFBP8418_025320" metaid="_211ec943-227e-4bb4-97db-c48e8d377ea0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026530" fbc:label="XFCFBP8418_026530" fbc:name="XFCFBP8418_026530" metaid="_30379727-01d4-4e36-98af-ee38178201a8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025440" fbc:label="XFCFBP8418_025440" fbc:name="XFCFBP8418_025440" metaid="_586b6a5e-e081-4449-ab0f-0e7486272c8c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002320" fbc:label="XFCFBP8418_002320" fbc:name="XFCFBP8418_002320" metaid="_05876e6b-03bc-426e-bee3-cd8b65b821aa"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025680" fbc:label="XFCFBP8418_025680" fbc:name="XFCFBP8418_025680" metaid="e12c45f1-06ac-4897-a30f-3ee365019bfe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002680" fbc:label="XFCFBP8418_002680" fbc:name="XFCFBP8418_002680" metaid="_34659f5a-f040-42be-87b3-a96a40b48489"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011280" fbc:label="XFCFBP8418_011280" fbc:name="XFCFBP8418_011280" metaid="_12b0e6fe-8e75-4386-ad65-8d5f7acad0b8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014310" fbc:label="XFCFBP8418_014310" fbc:name="XFCFBP8418_014310" metaid="_5a4f0507-a27d-4c04-a503-028bbae46981"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017940" fbc:label="XFCFBP8418_017940" fbc:name="XFCFBP8418_017940" metaid="_7b76ac93-f597-41d3-9b53-1227e16f6f6f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017820" fbc:label="XFCFBP8418_017820" fbc:name="XFCFBP8418_017820" metaid="_9dbee0b8-66ce-43ae-8371-9469e354fb84"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012370" fbc:label="XFCFBP8418_012370" fbc:name="XFCFBP8418_012370" metaid="b203b749-9563-4325-b3e1-6f2bb1c7c09e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012250" fbc:label="XFCFBP8418_012250" fbc:name="XFCFBP8418_012250" metaid="_9bc7f283-ec28-4ac6-993f-bd4d6c8028c0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014550" fbc:label="XFCFBP8418_014550" fbc:name="XFCFBP8418_014550" metaid="_8b4eb2a6-60f0-47a5-887a-17ede4e7f651"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015760" fbc:label="XFCFBP8418_015760" fbc:name="XFCFBP8418_015760" metaid="_7fb45179-c61e-4a3d-ac3a-501dfb961250"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026760" fbc:label="XFCFBP8418_026760" fbc:name="XFCFBP8418_026760" metaid="_0bbc4419-0767-47be-a9ec-46238a7315cf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025670" fbc:label="XFCFBP8418_025670" fbc:name="XFCFBP8418_025670" metaid="_75878dcb-5540-46e2-973f-fdfa729d1654"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022160" fbc:label="XFCFBP8418_022160" fbc:name="XFCFBP8418_022160" metaid="_24a7ada8-d46c-45b0-be49-ff32aed1fd69"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023250" fbc:label="XFCFBP8418_023250" fbc:name="XFCFBP8418_023250" metaid="f038ca3f-480e-4308-9551-f04bdf99d741"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003300" fbc:label="XFCFBP8418_003300" fbc:name="XFCFBP8418_003300" metaid="_167d3eab-5c85-4a31-b379-029464be376b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004870" fbc:label="XFCFBP8418_004870" fbc:name="XFCFBP8418_004870" metaid="e4c76c11-d98c-45ad-b719-08c2c1aaa071"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004750" fbc:label="XFCFBP8418_004750" fbc:name="XFCFBP8418_004750" metaid="a1be61f5-acdd-4f7f-984e-ada9f3697924"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002690" fbc:label="XFCFBP8418_002690" fbc:name="XFCFBP8418_002690" metaid="a5c7d266-d21f-477e-b0ff-5c056ddc045c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027970" fbc:label="XFCFBP8418_027970" fbc:name="XFCFBP8418_027970" metaid="ad09bc94-24c8-4014-aa46-a3dcb4e55c69"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002450" fbc:label="XFCFBP8418_002450" fbc:name="XFCFBP8418_002450" metaid="_495cac65-d389-4532-9399-41679d4fdb5f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001240" fbc:label="XFCFBP8418_001240" fbc:name="XFCFBP8418_001240" metaid="_72668afd-75dd-4bb6-84f1-d53aa5532ab9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027850" fbc:label="XFCFBP8418_027850" fbc:name="XFCFBP8418_027850" metaid="b4c0a6c9-0283-482d-aabb-092a228dabf8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011290" fbc:label="XFCFBP8418_011290" fbc:name="XFCFBP8418_011290" metaid="_8091067c-7cd8-4e00-bb80-214ac6393e2d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010080" fbc:label="XFCFBP8418_010080" fbc:name="XFCFBP8418_010080" metaid="_49303a59-fb6f-408b-8228-492b36f05ae5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016500" fbc:label="XFCFBP8418_016500" fbc:name="XFCFBP8418_016500" metaid="_7942cc8f-0a2b-4a23-9dcc-b5c270126543"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015410" fbc:label="XFCFBP8418_015410" fbc:name="XFCFBP8418_015410" metaid="ecd52943-b70b-447a-b98a-481dd029c834"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017710" fbc:label="XFCFBP8418_017710" fbc:name="XFCFBP8418_017710" metaid="_0f053eca-0d5a-4836-a745-a6658358d869"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011050" fbc:label="XFCFBP8418_011050" fbc:name="XFCFBP8418_011050" metaid="_8c5dea1a-b5ca-40e0-8388-58dd1b51c0d4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015770" fbc:label="XFCFBP8418_015770" fbc:name="XFCFBP8418_015770" metaid="_87dde2f7-98a5-472c-bd8b-4b4f3447a6c0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014680" fbc:label="XFCFBP8418_014680" fbc:name="XFCFBP8418_014680" metaid="_50144758-6d51-431e-acd2-eb262868a2dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014560" fbc:label="XFCFBP8418_014560" fbc:name="XFCFBP8418_014560" metaid="b51bfa79-dd07-4349-9e71-51ee0b2088b1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013350" fbc:label="XFCFBP8418_013350" fbc:name="XFCFBP8418_013350" metaid="c18b5ccf-2679-45a3-a97b-c0ca6feb6a0d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025580" fbc:label="XFCFBP8418_025580" fbc:name="XFCFBP8418_025580" metaid="_77208b6a-fc31-4a56-8e25-b31136fb5db2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022190" fbc:label="XFCFBP8418_022190" fbc:name="XFCFBP8418_022190" metaid="cd63720c-454c-4a09-9b0b-9342afbec3e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025100" fbc:label="XFCFBP8418_025100" fbc:name="XFCFBP8418_025100" metaid="_23768fb0-04d5-433c-bc51-24691b5a9843"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002100" fbc:label="XFCFBP8418_002100" fbc:name="XFCFBP8418_002100" metaid="cd3b02d7-46a3-412c-b0b0-006728a5b532"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025220" fbc:label="XFCFBP8418_025220" fbc:name="XFCFBP8418_025220" metaid="_5aa9b574-470f-4f13-9f36-7ab319df76f3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026550" fbc:label="XFCFBP8418_026550" fbc:name="XFCFBP8418_026550" metaid="_06f4a428-c8ed-4c59-969f-af789f2f4c33"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025340" fbc:label="XFCFBP8418_025340" fbc:name="XFCFBP8418_025340" metaid="_98eadfa3-2aed-479e-ae1f-c8c2f14ec5f6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000160" fbc:label="XFCFBP8418_000160" fbc:name="XFCFBP8418_000160" metaid="_09f19ec2-3ddb-4a36-aa9d-779b69890f80"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011060" fbc:label="XFCFBP8418_011060" fbc:name="XFCFBP8418_011060" metaid="_022e7903-f179-41ef-9923-a94bac63fdc8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016510" fbc:label="XFCFBP8418_016510" fbc:name="XFCFBP8418_016510" metaid="_333fd8d3-1832-49ae-a651-f0291e389915"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017720" fbc:label="XFCFBP8418_017720" fbc:name="XFCFBP8418_017720" metaid="d1153d78-9c8c-425b-87dc-8f8c8d39b7f3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012150" fbc:label="XFCFBP8418_012150" fbc:name="XFCFBP8418_012150" metaid="_18e66476-47d7-4d0b-973f-9189ec1a119b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016870" fbc:label="XFCFBP8418_016870" fbc:name="XFCFBP8418_016870" metaid="be67357c-353d-4bb3-acfc-ad44e3b68552"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013360" fbc:label="XFCFBP8418_013360" fbc:name="XFCFBP8418_013360" metaid="cf05cbde-8766-4e0c-829f-77a0aab01684"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013240" fbc:label="XFCFBP8418_013240" fbc:name="XFCFBP8418_013240" metaid="_48bb7905-917c-493c-8d6a-45d5412f3838"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000170" fbc:label="XFCFBP8418_000170" fbc:name="XFCFBP8418_000170" metaid="_115f008d-c827-461a-a446-341d80712d24"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025690" fbc:label="XFCFBP8418_025690" fbc:name="XFCFBP8418_025690" metaid="_528d601e-be5d-4b97-9131-a785526ae8f1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021090" fbc:label="XFCFBP8418_021090" fbc:name="XFCFBP8418_021090" metaid="_06a8ed61-2453-46ab-903f-4abd1b110bbb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025330" fbc:label="XFCFBP8418_025330" fbc:name="XFCFBP8418_025330" metaid="_6116020d-9538-4156-a16a-0575c9a535c8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026540" fbc:label="XFCFBP8418_026540" fbc:name="XFCFBP8418_026540" metaid="badf5bdd-8b84-4628-a72b-079451e139e4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025570" fbc:label="XFCFBP8418_025570" fbc:name="XFCFBP8418_025570" metaid="aad06541-9c8b-4898-bdfd-855b90a9f797"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026780" fbc:label="XFCFBP8418_026780" fbc:name="XFCFBP8418_026780" metaid="_0d77ea2b-4b20-4652-bc48-22b47d0f962f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006950" fbc:label="XFCFBP8418_006950" fbc:name="XFCFBP8418_006950" metaid="_44adbc6d-b8b5-4345-8693-59fd674fd662"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005980" fbc:label="XFCFBP8418_005980" fbc:name="XFCFBP8418_005980" metaid="f5096b33-a830-42e7-a5be-de2f60e9faaf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004890" fbc:label="XFCFBP8418_004890" fbc:name="XFCFBP8418_004890" metaid="d7d00bab-93b3-4b36-82e6-76e1362bf5bd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003680" fbc:label="XFCFBP8418_003680" fbc:name="XFCFBP8418_003680" metaid="_75f405e8-b132-48d8-8681-3ee502ef7238"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004770" fbc:label="XFCFBP8418_004770" fbc:name="XFCFBP8418_004770" metaid="cf3baa1f-35c7-4113-bb5a-8b363d4f86ff"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013370" fbc:label="XFCFBP8418_013370" fbc:name="XFCFBP8418_013370" metaid="_2e267577-d39d-4953-912a-9bab0140d30b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012160" fbc:label="XFCFBP8418_012160" fbc:name="XFCFBP8418_012160" metaid="ebc25baa-79be-4d1c-b6c3-fc1b6ee80b5d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011070" fbc:label="XFCFBP8418_011070" fbc:name="XFCFBP8418_011070" metaid="e3f8f29d-14f5-49d6-8f20-7ae281119c9a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011190" fbc:label="XFCFBP8418_011190" fbc:name="XFCFBP8418_011190" metaid="_5e86e2ca-828a-4cb7-9a5b-9ba6d0bfb726"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014460" fbc:label="XFCFBP8418_014460" fbc:name="XFCFBP8418_014460" metaid="_5068f707-0032-4d21-b40c-fa4b7acbf625"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015550" fbc:label="XFCFBP8418_015550" fbc:name="XFCFBP8418_015550" metaid="c8eca82e-de69-4327-8144-0fe64b66e585"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016880" fbc:label="XFCFBP8418_016880" fbc:name="XFCFBP8418_016880" metaid="c9daa238-876c-4058-97b3-7cf738027d45"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014340" fbc:label="XFCFBP8418_014340" fbc:name="XFCFBP8418_014340" metaid="f6345c6a-44aa-4873-addd-0abb173eef88"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015310" fbc:label="XFCFBP8418_015310" fbc:name="XFCFBP8418_015310" metaid="_71c33b32-596b-4527-b7b3-581b0151b1dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015430" fbc:label="XFCFBP8418_015430" fbc:name="XFCFBP8418_015430" metaid="_3669f30d-7a62-4c67-ad22-16e2f8158c59"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003690" fbc:label="XFCFBP8418_003690" fbc:name="XFCFBP8418_003690" metaid="ff6d1f99-b99f-4f0c-a399-e412a32682a5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001390" fbc:label="XFCFBP8418_001390" fbc:name="XFCFBP8418_001390" metaid="e3d6c5b2-b26c-4fcb-a6c2-75b5f1c0ff98"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026570" fbc:label="XFCFBP8418_026570" fbc:name="XFCFBP8418_026570" metaid="_9a9e6b27-14dd-4201-a9b8-71e5ef0d75e8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025480" fbc:label="XFCFBP8418_025480" fbc:name="XFCFBP8418_025480" metaid="a67fc0bc-afcd-4d0d-a72f-a6f87f305816"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026210" fbc:label="XFCFBP8418_026210" fbc:name="XFCFBP8418_026210" metaid="af90d175-5828-41be-b0d8-646106a9ead8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024030" fbc:label="XFCFBP8418_024030" fbc:name="XFCFBP8418_024030" metaid="_72519761-a5d2-4bc8-951f-2ed1a102beb5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025240" fbc:label="XFCFBP8418_025240" fbc:name="XFCFBP8418_025240" metaid="d81440d1-cdb5-4d9a-80ef-18991fff225a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004540" fbc:label="XFCFBP8418_004540" fbc:name="XFCFBP8418_004540" metaid="_772b6239-c720-4b40-8212-378f28a4896e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001030" fbc:label="XFCFBP8418_001030" fbc:name="XFCFBP8418_001030" metaid="af123ca2-6c8c-4431-8fe3-0b8e5df5d6bf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003570" fbc:label="XFCFBP8418_003570" fbc:name="XFCFBP8418_003570" metaid="_055dc003-c313-48c5-8ffe-666cf65727cb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004780" fbc:label="XFCFBP8418_004780" fbc:name="XFCFBP8418_004780" metaid="af4c5a13-80ec-4e6a-beb1-505ea80bf502"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004660" fbc:label="XFCFBP8418_004660" fbc:name="XFCFBP8418_004660" metaid="a4005edc-a4cc-4936-b93f-ed0c6aca7790"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003450" fbc:label="XFCFBP8418_003450" fbc:name="XFCFBP8418_003450" metaid="f12e9d00-1baa-4900-8153-862aaf1b49e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002120" fbc:label="XFCFBP8418_002120" fbc:name="XFCFBP8418_002120" metaid="caea4506-4a77-4eb4-bc3e-33c0f7c38c0b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014590" fbc:label="XFCFBP8418_014590" fbc:name="XFCFBP8418_014590" metaid="_83771f40-7a75-48f4-8227-0e57886271ef"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016890" fbc:label="XFCFBP8418_016890" fbc:name="XFCFBP8418_016890" metaid="bda2c0ff-ce02-4c85-8c9a-4575f6b3975c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013260" fbc:label="XFCFBP8418_013260" fbc:name="XFCFBP8418_013260" metaid="_849e6b6a-38f1-4404-87a4-5ade62abaad8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014470" fbc:label="XFCFBP8418_014470" fbc:name="XFCFBP8418_014470" metaid="_663fb483-0d6d-42c7-9307-02d1edc26664"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012050" fbc:label="XFCFBP8418_012050" fbc:name="XFCFBP8418_012050" metaid="ce89e242-1fc1-4a90-8207-0ae9db237d09"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015440" fbc:label="XFCFBP8418_015440" fbc:name="XFCFBP8418_015440" metaid="e412aa09-e1b4-423d-ab60-a1d3cc729063"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013020" fbc:label="XFCFBP8418_013020" fbc:name="XFCFBP8418_013020" metaid="f6705be3-5f6d-43a6-b22c-a09dcbdad115"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015560" fbc:label="XFCFBP8418_015560" fbc:name="XFCFBP8418_015560" metaid="ac904367-603d-4905-a3ba-b378c6997d65"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015200" fbc:label="XFCFBP8418_015200" fbc:name="XFCFBP8418_015200" metaid="_21dcaa14-d058-4eee-9c48-7d194d781dd6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015320" fbc:label="XFCFBP8418_015320" fbc:name="XFCFBP8418_015320" metaid="_506bf62c-c838-4df8-89c9-1b459e836692"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003580" fbc:label="XFCFBP8418_003580" fbc:name="XFCFBP8418_003580" metaid="_4a0297a6-fc2f-446e-acc5-cd12e276aa7b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004790" fbc:label="XFCFBP8418_004790" fbc:name="XFCFBP8418_004790" metaid="_7a1d17a3-8be1-424a-b14a-e7dab07a9cd6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002490" fbc:label="XFCFBP8418_002490" fbc:name="XFCFBP8418_002490" metaid="ab90a26a-9052-4775-9bce-fb37eb376137"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025470" fbc:label="XFCFBP8418_025470" fbc:name="XFCFBP8418_025470" metaid="_99e1c255-d2ff-46fd-8f42-0a095e68ed8c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026200" fbc:label="XFCFBP8418_026200" fbc:name="XFCFBP8418_026200" metaid="c49c46dd-adb8-45ee-8c12-43cac54422dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025230" fbc:label="XFCFBP8418_025230" fbc:name="XFCFBP8418_025230" metaid="_6a7145a7-4778-43b7-b7a7-7412115e13eb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026560" fbc:label="XFCFBP8418_026560" fbc:name="XFCFBP8418_026560" metaid="_3608d677-0122-4f53-8347-682c60a69cf9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001040" fbc:label="XFCFBP8418_001040" fbc:name="XFCFBP8418_001040" metaid="_2903b1b8-906b-44fc-8cc2-7f92d0fc23fd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004550" fbc:label="XFCFBP8418_004550" fbc:name="XFCFBP8418_004550" metaid="f9170e26-52a6-4cca-8585-7d0f6ce61c36"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003340" fbc:label="XFCFBP8418_003340" fbc:name="XFCFBP8418_003340" metaid="_688d8471-f089-477a-9c2f-f628d16a73c4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014480" fbc:label="XFCFBP8418_014480" fbc:name="XFCFBP8418_014480" metaid="_14e0cbe8-36d3-4982-9731-62bb23a2a15e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013030" fbc:label="XFCFBP8418_013030" fbc:name="XFCFBP8418_013030" metaid="_2bf8a5f1-9a7e-426f-9c03-7859b60c669b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015330" fbc:label="XFCFBP8418_015330" fbc:name="XFCFBP8418_015330" metaid="daf79028-d1a1-4981-87ff-1377043894c7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016540" fbc:label="XFCFBP8418_016540" fbc:name="XFCFBP8418_016540" metaid="_2ba3745e-3f56-4ff6-a6e6-a7389179aa0b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005890" fbc:label="XFCFBP8418_005890" fbc:name="XFCFBP8418_005890" metaid="d8651f5a-0acd-41a4-99cf-4c2a32e974bc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003470" fbc:label="XFCFBP8418_003470" fbc:name="XFCFBP8418_003470" metaid="cea8adab-a74d-400c-b5db-58b45f811944"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004680" fbc:label="XFCFBP8418_004680" fbc:name="XFCFBP8418_004680" metaid="_2106ddcd-1fea-43ac-84b1-898642074d91"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001170" fbc:label="XFCFBP8418_001170" fbc:name="XFCFBP8418_001170" metaid="fe8535a6-ead9-4e91-9760-ab0f235aed32"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007710" fbc:label="XFCFBP8418_007710" fbc:name="XFCFBP8418_007710" metaid="_4dd560ef-6db6-43d0-ba82-5da1995b93f3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024050" fbc:label="XFCFBP8418_024050" fbc:name="XFCFBP8418_024050" metaid="bfb65221-74ff-4bc4-956c-fa4ad83584e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025260" fbc:label="XFCFBP8418_025260" fbc:name="XFCFBP8418_025260" metaid="c0c5bc12-3306-4cc7-b1ef-d79986dc704b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025380" fbc:label="XFCFBP8418_025380" fbc:name="XFCFBP8418_025380" metaid="_996c7f65-a8dc-4be9-a2bc-9156432f7fef"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026230" fbc:label="XFCFBP8418_026230" fbc:name="XFCFBP8418_026230" metaid="_9d8f837f-b005-485e-b126-8cacfbc2f436"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002140" fbc:label="XFCFBP8418_002140" fbc:name="XFCFBP8418_002140" metaid="_541a8650-a91c-4b67-9fab-22375e627b98"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015580" fbc:label="XFCFBP8418_015580" fbc:name="XFCFBP8418_015580" metaid="_5ee398ec-e3bd-4b69-8aec-383318aac58e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013040" fbc:label="XFCFBP8418_013040" fbc:name="XFCFBP8418_013040" metaid="_5dbe7d82-c5b3-4c60-a3f8-cde3179055e9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015100" fbc:label="XFCFBP8418_015100" fbc:name="XFCFBP8418_015100" metaid="ebce0add-0b51-46a4-aa49-fa3bb5316238"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004690" fbc:label="XFCFBP8418_004690" fbc:name="XFCFBP8418_004690" metaid="_4796d981-d777-4f00-8143-630046a4b165"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003480" fbc:label="XFCFBP8418_003480" fbc:name="XFCFBP8418_003480" metaid="cb89d091-a95d-45b5-a4dc-2412d0ecb5ed"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003360" fbc:label="XFCFBP8418_003360" fbc:name="XFCFBP8418_003360" metaid="_08cf6357-287d-4d2d-ab2d-5e051c41106a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007840" fbc:label="XFCFBP8418_007840" fbc:name="XFCFBP8418_007840" metaid="_53fa3704-1080-4937-a6fd-1d143f2ee92e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002150" fbc:label="XFCFBP8418_002150" fbc:name="XFCFBP8418_002150" metaid="_10c3e447-3d8d-42ae-97ee-d34461cb8b04"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002270" fbc:label="XFCFBP8418_002270" fbc:name="XFCFBP8418_002270" metaid="_9d569d38-576b-432e-9dd4-78a3566988e8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008810" fbc:label="XFCFBP8418_008810" fbc:name="XFCFBP8418_008810" metaid="_650ce2d4-3917-49ac-9f15-ae6a8c84b6ee"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025250" fbc:label="XFCFBP8418_025250" fbc:name="XFCFBP8418_025250" metaid="_8de0f863-36f0-4198-9a91-17b925b65947"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007600" fbc:label="XFCFBP8418_007600" fbc:name="XFCFBP8418_007600" metaid="_0f34f093-4ec6-4fb9-b9fa-f466865fa41e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023070" fbc:label="XFCFBP8418_023070" fbc:name="XFCFBP8418_023070" metaid="a6cc3135-2eab-4009-b248-5c4fd17fdec7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026220" fbc:label="XFCFBP8418_026220" fbc:name="XFCFBP8418_026220" metaid="cad58c4a-f2be-4aab-8344-e723ae082f04"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006750" fbc:label="XFCFBP8418_006750" fbc:name="XFCFBP8418_006750" metaid="_618e9e83-ab5e-42d3-be24-bc3b50b04e10"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017890" fbc:label="XFCFBP8418_017890" fbc:name="XFCFBP8418_017890" metaid="ecf34dee-c0a5-40d6-9609-40fb6bc241f4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013290" fbc:label="XFCFBP8418_013290" fbc:name="XFCFBP8418_013290" metaid="_7155af0f-5eef-42bd-8727-ecf9942dc136"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015350" fbc:label="XFCFBP8418_015350" fbc:name="XFCFBP8418_015350" metaid="_22ce9923-13d6-4b3a-baa7-2515b025c6a0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015470" fbc:label="XFCFBP8418_015470" fbc:name="XFCFBP8418_015470" metaid="_4bd20d05-3847-4f0d-b97f-7df58db12d54"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020820" fbc:label="XFCFBP8418_020820" fbc:name="XFCFBP8418_020820" metaid="_0fda6ae0-68d9-4dc5-ad4a-1d2c87efee38"/> + <fbc:geneProduct fbc:id="Spontaneous" fbc:label="Spontaneous" fbc:name="Spontaneous" metaid="_91540909-8718-4b1c-960b-3388e4a89d97"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020700" fbc:label="XFCFBP8418_020700" fbc:name="XFCFBP8418_020700" metaid="_109d9d73-14aa-40f2-8a94-fdb6cf571a15"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018620" fbc:label="XFCFBP8418_018620" fbc:name="XFCFBP8418_018620" metaid="_4988d09e-3bf8-4026-9264-116f127f4679"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015110" fbc:label="XFCFBP8418_015110" fbc:name="XFCFBP8418_015110" metaid="_378f2cb0-34a9-4b4a-b61f-026251f691f0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019710" fbc:label="XFCFBP8418_019710" fbc:name="XFCFBP8418_019710" metaid="b4004d86-f693-4493-b83d-c2b7f6697937"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002280" fbc:label="XFCFBP8418_002280" fbc:name="XFCFBP8418_002280" metaid="_86884968-6a36-431d-96da-36bf9dff681e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003250" fbc:label="XFCFBP8418_003250" fbc:name="XFCFBP8418_003250" metaid="_33610fd0-dd4c-419a-9d7b-f7dcc7abff14"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026250" fbc:label="XFCFBP8418_026250" fbc:name="XFCFBP8418_026250" metaid="_586240dd-5bb5-4bd8-a109-6705ec5ef803"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009910" fbc:label="XFCFBP8418_009910" fbc:name="XFCFBP8418_009910" metaid="_928d5383-2b14-4ee5-846e-281a6f659a79"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025280" fbc:label="XFCFBP8418_025280" fbc:name="XFCFBP8418_025280" metaid="c68d039d-3ae3-4d18-9645-623a05e18d8c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004100" fbc:label="XFCFBP8418_004100" fbc:name="XFCFBP8418_004100" metaid="bc23fcdc-5a8c-4344-b10e-d82e22860dcb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004340" fbc:label="XFCFBP8418_004340" fbc:name="XFCFBP8418_004340" metaid="_73ad96a7-ae5a-4c68-87c4-70c09421b11d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003010" fbc:label="XFCFBP8418_003010" fbc:name="XFCFBP8418_003010" metaid="b8fc948f-1eb3-472a-b557-aba33afeeac2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012090" fbc:label="XFCFBP8418_012090" fbc:name="XFCFBP8418_012090" metaid="af2ef496-0887-4661-9940-2c1a33c2e8e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014390" fbc:label="XFCFBP8418_014390" fbc:name="XFCFBP8418_014390" metaid="_919ce9ed-af86-479e-8dff-f616a33e91e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016450" fbc:label="XFCFBP8418_016450" fbc:name="XFCFBP8418_016450" metaid="a72cd43e-93f4-486e-a06c-78020fe722d4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015120" fbc:label="XFCFBP8418_015120" fbc:name="XFCFBP8418_015120" metaid="_70558edf-ca75-42eb-bea1-835bb13067ff"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002170" fbc:label="XFCFBP8418_002170" fbc:name="XFCFBP8418_002170" metaid="_65ca3427-86db-41bc-9a16-a05517f61848"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006890" fbc:label="XFCFBP8418_006890" fbc:name="XFCFBP8418_006890" metaid="e381e312-7d2c-47cc-aa3e-a1944d1384e6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027690" fbc:label="XFCFBP8418_027690" fbc:name="XFCFBP8418_027690" metaid="_6915dfa4-3d35-4336-be22-442879d4fb51"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026240" fbc:label="XFCFBP8418_026240" fbc:name="XFCFBP8418_026240" metaid="cdcc9809-38b2-496c-b728-90ff94f6be74"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025270" fbc:label="XFCFBP8418_025270" fbc:name="XFCFBP8418_025270" metaid="_6438db1e-a55a-40f6-a874-1dd1869330cc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003020" fbc:label="XFCFBP8418_003020" fbc:name="XFCFBP8418_003020" metaid="_301c4a85-795f-4090-b9f0-c3c5be0245aa"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006650" fbc:label="XFCFBP8418_006650" fbc:name="XFCFBP8418_006650" metaid="_8a2c14a2-07b1-413b-af05-95ae0184549a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015370" fbc:label="XFCFBP8418_015370" fbc:name="XFCFBP8418_015370" metaid="_3ec480dc-eebe-476d-9a1f-ad240baecdc9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015130" fbc:label="XFCFBP8418_015130" fbc:name="XFCFBP8418_015130" metaid="_9b16a9b5-fe80-477a-89d1-2cac3b9a5b35"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015250" fbc:label="XFCFBP8418_015250" fbc:name="XFCFBP8418_015250" metaid="_10b0fc8f-b392-4d58-8301-20899e257841"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016460" fbc:label="XFCFBP8418_016460" fbc:name="XFCFBP8418_016460" metaid="f740ef7a-4342-44ef-aa21-b272fec291f2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020600" fbc:label="XFCFBP8418_020600" fbc:name="XFCFBP8418_020600" metaid="_041939b2-a1af-4cc8-8405-1dfab348583d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020720" fbc:label="XFCFBP8418_020720" fbc:name="XFCFBP8418_020720" metaid="ce06c5cb-37f3-4173-a3c0-4a3604ca60b1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019610" fbc:label="XFCFBP8418_019610" fbc:name="XFCFBP8418_019610" metaid="d5e306cc-d6ea-4511-88d5-a5a06dc33436"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018640" fbc:label="XFCFBP8418_018640" fbc:name="XFCFBP8418_018640" metaid="_870d7a70-904d-4ee9-95a4-bd0a1d1d38fe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006660" fbc:label="XFCFBP8418_006660" fbc:name="XFCFBP8418_006660" metaid="_1132991e-2338-4534-88cd-173d17bc6728"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003030" fbc:label="XFCFBP8418_003030" fbc:name="XFCFBP8418_003030" metaid="b64c26db-5ba3-41df-8829-9355284892a6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003390" fbc:label="XFCFBP8418_003390" fbc:name="XFCFBP8418_003390" metaid="cb864f10-b2c1-49a4-8ff1-16929723b7fb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026270" fbc:label="XFCFBP8418_026270" fbc:name="XFCFBP8418_026270" metaid="_34b29c5b-ed08-4244-b46e-d9e5001d8f3b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004000" fbc:label="XFCFBP8418_004000" fbc:name="XFCFBP8418_004000" metaid="_94282519-d92d-4d6a-88d4-cb6f1bbefd0b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015380" fbc:label="XFCFBP8418_015380" fbc:name="XFCFBP8418_015380" metaid="eb4d3ed4-311b-46a2-9e8b-62d549f872cc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018650" fbc:label="XFCFBP8418_018650" fbc:name="XFCFBP8418_018650" metaid="d7bb87eb-bcfd-4b9d-93a9-5a54644e094a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015020" fbc:label="XFCFBP8418_015020" fbc:name="XFCFBP8418_015020" metaid="_7bde40ff-97ad-411d-a372-d5694b60482d"/> + <fbc:geneProduct fbc:id="or" fbc:label="or" fbc:name="or" metaid="_63f3cb00-6971-483a-b5ca-73a6cc703dd9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020710" fbc:label="XFCFBP8418_020710" fbc:name="XFCFBP8418_020710" metaid="d6be4e28-3876-4081-8465-238de7bb1b3e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019500" fbc:label="XFCFBP8418_019500" fbc:name="XFCFBP8418_019500" metaid="b6488c99-cd09-415e-9cf1-2da491f94fdd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019740" fbc:label="XFCFBP8418_019740" fbc:name="XFCFBP8418_019740" metaid="fc2ddb90-a5d6-4292-9bee-30db528b72f6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025290" fbc:label="XFCFBP8418_025290" fbc:name="XFCFBP8418_025290" metaid="_8fbf3310-bea5-40c6-b483-d7a9e6db1ca1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006790" fbc:label="XFCFBP8418_006790" fbc:name="XFCFBP8418_006790" metaid="f3d9076b-4b07-4cef-8773-e7c03bda5ffd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004370" fbc:label="XFCFBP8418_004370" fbc:name="XFCFBP8418_004370" metaid="a5c07e1e-9492-453c-b32c-01139e95f46d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009820" fbc:label="XFCFBP8418_009820" fbc:name="XFCFBP8418_009820" metaid="_662c2bb3-f9e2-4c6d-9e1c-9808710cc9ce"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026260" fbc:label="XFCFBP8418_026260" fbc:name="XFCFBP8418_026260" metaid="_7cc24378-3702-457a-98ba-10e8e010dd9e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004010" fbc:label="XFCFBP8418_004010" fbc:name="XFCFBP8418_004010" metaid="_409fb5e6-d33f-45a2-b216-51997ea555ad"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016360" fbc:label="XFCFBP8418_016360" fbc:name="XFCFBP8418_016360" metaid="_88e7416b-75ea-43ef-9b57-f188a7ab7d57"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015270" fbc:label="XFCFBP8418_015270" fbc:name="XFCFBP8418_015270" metaid="_9025e082-1d7c-4b50-9f08-8e4ebc0b1158"/> + <fbc:geneProduct fbc:id="XFCFBP8418_017690" fbc:label="XFCFBP8418_017690" fbc:name="XFCFBP8418_017690" metaid="_80db08e0-1f2f-494c-b377-23b3d72d172a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015030" fbc:label="XFCFBP8418_015030" fbc:name="XFCFBP8418_015030" metaid="_01340e67-4017-4517-9eb4-aead3b4fcb75"/> + <fbc:geneProduct fbc:id="XFCFBP8418_013090" fbc:label="XFCFBP8418_013090" fbc:name="XFCFBP8418_013090" metaid="_144322cb-f9ee-4fb9-bc9a-4a467446fae5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015390" fbc:label="XFCFBP8418_015390" fbc:name="XFCFBP8418_015390" metaid="_2c60f0ff-a0d9-40fe-a880-41c07c596779"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004140" fbc:label="XFCFBP8418_004140" fbc:name="XFCFBP8418_004140" metaid="_247a23d4-777f-4d92-bbbd-76b4e00fae8e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006440" fbc:label="XFCFBP8418_006440" fbc:name="XFCFBP8418_006440" metaid="_27b41cf0-907d-4f2b-965d-3e4aede931e3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009950" fbc:label="XFCFBP8418_009950" fbc:name="XFCFBP8418_009950" metaid="_0b055816-f919-446c-9bf7-f001a865b53a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003290" fbc:label="XFCFBP8418_003290" fbc:name="XFCFBP8418_003290" metaid="_782bf904-b5fe-4466-a99b-1935c3ebbf40"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010930" fbc:label="XFCFBP8418_010930" fbc:name="XFCFBP8418_010930" metaid="_3efac687-f25f-4d1b-88a2-93d457b5cd9a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006320" fbc:label="XFCFBP8418_006320" fbc:name="XFCFBP8418_006320" metaid="_0f69c2e5-0cb7-4548-9fa2-c65083e883d6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020610" fbc:label="XFCFBP8418_020610" fbc:name="XFCFBP8418_020610" metaid="_8decccfa-cdd6-492c-b4ac-1c90ce7d99c2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016490" fbc:label="XFCFBP8418_016490" fbc:name="XFCFBP8418_016490" metaid="f8b75ab3-cda7-425e-88b7-974d3b1d782e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008630" fbc:label="XFCFBP8418_008630" fbc:name="XFCFBP8418_008630" metaid="c4694492-6b9e-4753-9039-0e6e17472385"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010940" fbc:label="XFCFBP8418_010940" fbc:name="XFCFBP8418_010940" metaid="afbb170f-7b66-4c7c-9b7d-eedbbb275c7d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025070" fbc:label="XFCFBP8418_025070" fbc:name="XFCFBP8418_025070" metaid="_919a25fb-86e7-4893-aead-cfc3faf0f516"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005240" fbc:label="XFCFBP8418_005240" fbc:name="XFCFBP8418_005240" metaid="_594fb251-22ad-4721-8e30-c13058bd8a19"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006450" fbc:label="XFCFBP8418_006450" fbc:name="XFCFBP8418_006450" metaid="_6657ff9a-c7bd-483b-bc30-61176aa3fcf9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009840" fbc:label="XFCFBP8418_009840" fbc:name="XFCFBP8418_009840" metaid="b38da076-ea7e-4fee-942e-1e115f77e188"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006690" fbc:label="XFCFBP8418_006690" fbc:name="XFCFBP8418_006690" metaid="_89e6034a-0b00-4085-9bc9-c8fad83b14ae"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004150" fbc:label="XFCFBP8418_004150" fbc:name="XFCFBP8418_004150" metaid="e1993338-5c48-4735-be96-ca72c9e2bd51"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010700" fbc:label="XFCFBP8418_010700" fbc:name="XFCFBP8418_010700" metaid="aae55b2b-ff2b-4458-8f35-5111cd991aef"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007540" fbc:label="XFCFBP8418_007540" fbc:name="XFCFBP8418_007540" metaid="_0b1f3fe0-0f3a-4e4d-94e3-49f6013e12bc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008750" fbc:label="XFCFBP8418_008750" fbc:name="XFCFBP8418_008750" metaid="_92ac0bb5-8967-48b9-b258-b0320fad67c3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020760" fbc:label="XFCFBP8418_020760" fbc:name="XFCFBP8418_020760" metaid="e4e91f0e-5dbd-4d2e-a07f-32e1ab0c8b05"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019770" fbc:label="XFCFBP8418_019770" fbc:name="XFCFBP8418_019770" metaid="_68208f5e-2aa8-4ca8-9d85-ac7df1b78bbe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018680" fbc:label="XFCFBP8418_018680" fbc:name="XFCFBP8418_018680" metaid="aaafcae3-a92d-418d-b6b6-e22155723b99"/> + <fbc:geneProduct fbc:id="XFCFBP8418_016380" fbc:label="XFCFBP8418_016380" fbc:name="XFCFBP8418_016380" metaid="_8cf5363c-89dc-42f6-b0c4-5e34a6457774"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026070" fbc:label="XFCFBP8418_026070" fbc:name="XFCFBP8418_026070" metaid="_6e4eeaf4-9d68-4e94-8678-4036116fe4e6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006340" fbc:label="XFCFBP8418_006340" fbc:name="XFCFBP8418_006340" metaid="_9f842e28-0a67-40ff-81e1-1ffa7ffb3d59"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005250" fbc:label="XFCFBP8418_005250" fbc:name="XFCFBP8418_005250" metaid="_7fafe3d6-bf37-41b1-9f59-f53f0fad0651"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006460" fbc:label="XFCFBP8418_006460" fbc:name="XFCFBP8418_006460" metaid="_7b830632-6a38-430f-a32c-2db897364b1a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004160" fbc:label="XFCFBP8418_004160" fbc:name="XFCFBP8418_004160" metaid="_3c80f6b6-f069-4848-80e3-6dffea0f1062"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003190" fbc:label="XFCFBP8418_003190" fbc:name="XFCFBP8418_003190" metaid="_1b137cb7-6c5a-4349-96a0-d420833c706f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011800" fbc:label="XFCFBP8418_011800" fbc:name="XFCFBP8418_011800" metaid="_1fae67de-c17a-4cd9-b708-c20e51b969ef"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010710" fbc:label="XFCFBP8418_010710" fbc:name="XFCFBP8418_010710" metaid="f061abf5-9d26-445b-bfe8-59e2129c1922"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009850" fbc:label="XFCFBP8418_009850" fbc:name="XFCFBP8418_009850" metaid="_4fb7859d-b172-4d26-b3aa-326ee9096ab3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007430" fbc:label="XFCFBP8418_007430" fbc:name="XFCFBP8418_007430" metaid="_1f26e597-9a70-4f92-84ba-39191c93afda"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019420" fbc:label="XFCFBP8418_019420" fbc:name="XFCFBP8418_019420" metaid="_7081cc1c-5b60-41d4-90f9-41029a380e95"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020870" fbc:label="XFCFBP8418_020870" fbc:name="XFCFBP8418_020870" metaid="f82e510d-5340-4f99-8dd4-13183c24e7e6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019540" fbc:label="XFCFBP8418_019540" fbc:name="XFCFBP8418_019540" metaid="_0b521de4-6233-4a6f-8738-6f5ed693116c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020630" fbc:label="XFCFBP8418_020630" fbc:name="XFCFBP8418_020630" metaid="_5cb7052c-9845-4644-9f1d-54472ccd9cb9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021600" fbc:label="XFCFBP8418_021600" fbc:name="XFCFBP8418_021600" metaid="_4a77ef08-5eb5-4b35-8599-c57d2cbe915d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023900" fbc:label="XFCFBP8418_023900" fbc:name="XFCFBP8418_023900" metaid="d36609da-fe5c-426d-a25b-afeb04ced854"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026060" fbc:label="XFCFBP8418_026060" fbc:name="XFCFBP8418_026060" metaid="_37b08f58-f025-4a9c-96bd-251ac8feab05"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010720" fbc:label="XFCFBP8418_010720" fbc:name="XFCFBP8418_010720" metaid="_80df5172-3034-409e-889e-ee735d0b2f74"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006350" fbc:label="XFCFBP8418_006350" fbc:name="XFCFBP8418_006350" metaid="_8d1d4f6b-10e9-40c7-a999-70dbab00533f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005140" fbc:label="XFCFBP8418_005140" fbc:name="XFCFBP8418_005140" metaid="_315bbb13-9217-488a-ba48-a9e06aa2f7d4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004170" fbc:label="XFCFBP8418_004170" fbc:name="XFCFBP8418_004170" metaid="_196a2b58-c2ab-4123-8f78-8415fabdc0ce"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007680" fbc:label="XFCFBP8418_007680" fbc:name="XFCFBP8418_007680" metaid="_74ac6d8b-8ee1-4242-9078-1ace06a09271"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009740" fbc:label="XFCFBP8418_009740" fbc:name="XFCFBP8418_009740" metaid="_606b92a0-c99c-4fd3-821f-913cb19b2834"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008650" fbc:label="XFCFBP8418_008650" fbc:name="XFCFBP8418_008650" metaid="_8c528a72-6904-4306-b776-bacc7575d741"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020420" fbc:label="XFCFBP8418_020420" fbc:name="XFCFBP8418_020420" metaid="_948c356f-5670-49a7-a619-a01d93770b32"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019430" fbc:label="XFCFBP8418_019430" fbc:name="XFCFBP8418_019430" metaid="cd772af5-958a-46bf-9f17-6184767c639b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023810" fbc:label="XFCFBP8418_023810" fbc:name="XFCFBP8418_023810" metaid="_24cdbdf3-b65e-4a73-a20b-d77815b9039e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021510" fbc:label="XFCFBP8418_021510" fbc:name="XFCFBP8418_021510" metaid="_96bfab54-693a-4df3-b314-05655be54c45"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020300" fbc:label="XFCFBP8418_020300" fbc:name="XFCFBP8418_020300" metaid="c784ff5b-812f-4880-9b25-434b1d34bd97"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024900" fbc:label="XFCFBP8418_024900" fbc:name="XFCFBP8418_024900" metaid="_604bf253-f842-4f66-a9b3-8e39871aa3fe"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010980" fbc:label="XFCFBP8418_010980" fbc:name="XFCFBP8418_010980" metaid="_12df8f0d-530f-4745-8b61-73fb8716e1ed"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010730" fbc:label="XFCFBP8418_010730" fbc:name="XFCFBP8418_010730" metaid="_5bd6079d-2813-4c5b-8626-b100c7bb48c9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005030" fbc:label="XFCFBP8418_005030" fbc:name="XFCFBP8418_005030" metaid="e5a389ed-5703-4fac-9f75-1a635598b7cd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010970" fbc:label="XFCFBP8418_010970" fbc:name="XFCFBP8418_010970" metaid="f3875c37-239b-484c-b85c-8e55bdce74de"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004180" fbc:label="XFCFBP8418_004180" fbc:name="XFCFBP8418_004180" metaid="_4e1aa067-4f99-480f-935e-f1e1285b1e93"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004060" fbc:label="XFCFBP8418_004060" fbc:name="XFCFBP8418_004060" metaid="_33ce81d9-d713-416a-bc84-3883ba49e9a2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007690" fbc:label="XFCFBP8418_007690" fbc:name="XFCFBP8418_007690" metaid="d552d0f6-b5df-46dd-b060-adab64b17df5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007450" fbc:label="XFCFBP8418_007450" fbc:name="XFCFBP8418_007450" metaid="b5cae619-084e-4f65-8740-7c7a71bddce6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008660" fbc:label="XFCFBP8418_008660" fbc:name="XFCFBP8418_008660" metaid="_38e8f57e-710b-4f47-b2dc-755bb89b701f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008540" fbc:label="XFCFBP8418_008540" fbc:name="XFCFBP8418_008540" metaid="_8be148fe-bcf2-4ccc-aabc-5f75e34bbbf5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018110" fbc:label="XFCFBP8418_018110" fbc:name="XFCFBP8418_018110" metaid="d8eb045c-aa2e-4bb0-9482-4f314b47c341"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021500" fbc:label="XFCFBP8418_021500" fbc:name="XFCFBP8418_021500" metaid="d22457b3-5d30-4944-a0ee-8890cd8bd090"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019440" fbc:label="XFCFBP8418_019440" fbc:name="XFCFBP8418_019440" metaid="_1b667ba7-0d9a-4aa5-bcee-060670e118d0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019680" fbc:label="XFCFBP8418_019680" fbc:name="XFCFBP8418_019680" metaid="_1b7d9fc1-1ff5-401e-8438-f9f103be05dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010500" fbc:label="XFCFBP8418_010500" fbc:name="XFCFBP8418_010500" metaid="_0e9804e2-a388-414b-bcae-31d1ede34a1f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006010" fbc:label="XFCFBP8418_006010" fbc:name="XFCFBP8418_006010" metaid="ac594632-749a-4d5d-bf72-ea00101a0777"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026080" fbc:label="XFCFBP8418_026080" fbc:name="XFCFBP8418_026080" metaid="df794132-1bf5-4018-8706-912b6a3cd1b5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005040" fbc:label="XFCFBP8418_005040" fbc:name="XFCFBP8418_005040" metaid="_0f0723f9-fc6a-4bd4-8f8d-c05d8958a5b6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004070" fbc:label="XFCFBP8418_004070" fbc:name="XFCFBP8418_004070" metaid="_36045a66-6a4e-4ae1-b2dd-ef5dd2098140"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006490" fbc:label="XFCFBP8418_006490" fbc:name="XFCFBP8418_006490" metaid="eefc0364-4fdb-480d-a33b-400fbecdd031"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012920" fbc:label="XFCFBP8418_012920" fbc:name="XFCFBP8418_012920" metaid="_8dbd1a53-1787-4388-b84e-ee72c038918e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009760" fbc:label="XFCFBP8418_009760" fbc:name="XFCFBP8418_009760" metaid="_2891d25c-6dd3-474d-ab43-fb3a0fb4764d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020780" fbc:label="XFCFBP8418_020780" fbc:name="XFCFBP8418_020780" metaid="fb6b7aeb-42ce-41b5-865a-b98b849b0e15"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021410" fbc:label="XFCFBP8418_021410" fbc:name="XFCFBP8418_021410" metaid="_312e2c57-6ee5-462f-bdde-1a490ecddcb2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020320" fbc:label="XFCFBP8418_020320" fbc:name="XFCFBP8418_020320" metaid="_83978127-3730-4f21-a9f9-1b4e1d949756"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019450" fbc:label="XFCFBP8418_019450" fbc:name="XFCFBP8418_019450" metaid="_921854c4-c6c1-4fa6-8a41-b8dcb1b6325d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018480" fbc:label="XFCFBP8418_018480" fbc:name="XFCFBP8418_018480" metaid="_4c5c44df-e9b4-43c8-a4b6-f84bdd98ce79"/> + <fbc:geneProduct fbc:id="No_Assignment" fbc:label="No_Assignment" fbc:name="No_Assignment" metaid="_0ed9ff45-4a3e-4e47-ba71-ca9272df97ec"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011970" fbc:label="XFCFBP8418_011970" fbc:name="XFCFBP8418_011970" metaid="_1b91fc13-f478-4237-97b7-e0106e05b059"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010510" fbc:label="XFCFBP8418_010510" fbc:name="XFCFBP8418_010510" metaid="_59119fb5-da1d-4fa5-a0ee-16154f252179"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010630" fbc:label="XFCFBP8418_010630" fbc:name="XFCFBP8418_010630" metaid="_2f707fb1-6b67-48d9-a1c5-a6efaea79d71"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011960" fbc:label="XFCFBP8418_011960" fbc:name="XFCFBP8418_011960" metaid="_04a0e1e5-8cef-4ff6-9d15-a76651284298"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005050" fbc:label="XFCFBP8418_005050" fbc:name="XFCFBP8418_005050" metaid="_1f97ade5-3013-4b5e-b48f-6f40ee12e868"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005170" fbc:label="XFCFBP8418_005170" fbc:name="XFCFBP8418_005170" metaid="_636ad1f3-54a0-4a4d-8cf5-3f831be6ddb6"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004080" fbc:label="XFCFBP8418_004080" fbc:name="XFCFBP8418_004080" metaid="_1d6f5920-10bb-4d47-ae30-66b94bde5918"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009650" fbc:label="XFCFBP8418_009650" fbc:name="XFCFBP8418_009650" metaid="_24617600-e7e1-485f-a887-f50267208af8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023960" fbc:label="XFCFBP8418_023960" fbc:name="XFCFBP8418_023960" metaid="_7f3b7a06-2db6-4b5d-a91c-3991e1a17b82"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009770" fbc:label="XFCFBP8418_009770" fbc:name="XFCFBP8418_009770" metaid="_4c30e149-d8c5-4281-8738-5e8e77611acd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020330" fbc:label="XFCFBP8418_020330" fbc:name="XFCFBP8418_020330" metaid="e1fb3f61-eeea-4d8a-bbd6-79a9f167ce32"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021660" fbc:label="XFCFBP8418_021660" fbc:name="XFCFBP8418_021660" metaid="_8bd87615-bd4f-4d09-8efa-d30eedaedd7e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020310" fbc:label="XFCFBP8418_020310" fbc:name="XFCFBP8418_020310" metaid="d5f4da41-cb2a-4679-bb3c-37e0b610eb2d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024910" fbc:label="XFCFBP8418_024910" fbc:name="XFCFBP8418_024910" metaid="_746ef16f-af84-4ab5-a434-9e2a7b4ca968"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021520" fbc:label="XFCFBP8418_021520" fbc:name="XFCFBP8418_021520" metaid="_22cd1748-7f2a-4d10-b793-cb80b6dba265"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023820" fbc:label="XFCFBP8418_023820" fbc:name="XFCFBP8418_023820" metaid="dc6c6701-fa42-4432-8443-f90cf7194d7c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020430" fbc:label="XFCFBP8418_020430" fbc:name="XFCFBP8418_020430" metaid="_5875e96e-bde4-461b-8e4e-abb508a2aa59"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019220" fbc:label="XFCFBP8418_019220" fbc:name="XFCFBP8418_019220" metaid="_83ef86ea-346d-411b-bd71-adbb97845ccf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021400" fbc:label="XFCFBP8418_021400" fbc:name="XFCFBP8418_021400" metaid="fcc037b1-dc0c-4666-95d4-d3e6a7b3c189"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000840" fbc:label="XFCFBP8418_000840" fbc:name="XFCFBP8418_000840" metaid="_02c21d2a-4f4c-4680-b376-9d59b93687a8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010890" fbc:label="XFCFBP8418_010890" fbc:name="XFCFBP8418_010890" metaid="_370f87ce-2fc8-4564-a38a-a7b63a26d0ad"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010520" fbc:label="XFCFBP8418_010520" fbc:name="XFCFBP8418_010520" metaid="_97e20af6-179e-4fc3-82da-518ab5dcb275"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005060" fbc:label="XFCFBP8418_005060" fbc:name="XFCFBP8418_005060" metaid="_08e98200-7f30-4cdf-89bb-2838414910a1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004090" fbc:label="XFCFBP8418_004090" fbc:name="XFCFBP8418_004090" metaid="_4226cdaf-5f57-4593-9637-3c7f868133b7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005180" fbc:label="XFCFBP8418_005180" fbc:name="XFCFBP8418_005180" metaid="_0eb13d1d-df41-4e66-bb26-29dd223173ef"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009780" fbc:label="XFCFBP8418_009780" fbc:name="XFCFBP8418_009780" metaid="_5ae9d90d-312e-43f8-b8fa-dc9d46a2b8a8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025910" fbc:label="XFCFBP8418_025910" fbc:name="XFCFBP8418_025910" metaid="_475467d2-f0d2-4849-a40e-3a130532b6a5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024700" fbc:label="XFCFBP8418_024700" fbc:name="XFCFBP8418_024700" metaid="f4c7ba29-b06b-4576-97ee-7068f3379545"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023610" fbc:label="XFCFBP8418_023610" fbc:name="XFCFBP8418_023610" metaid="_3df0f6a6-cd16-42da-9895-27f7de8c80c9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011750" fbc:label="XFCFBP8418_011750" fbc:name="XFCFBP8418_011750" metaid="e33a9bde-ff87-4cdb-a310-55f79c453c32"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011870" fbc:label="XFCFBP8418_011870" fbc:name="XFCFBP8418_011870" metaid="_8ed6c505-d32d-4110-bbb2-155044fdd122"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005070" fbc:label="XFCFBP8418_005070" fbc:name="XFCFBP8418_005070" metaid="_2b68c588-7147-4b11-941f-1e164c762e4e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007370" fbc:label="XFCFBP8418_007370" fbc:name="XFCFBP8418_007370" metaid="_2888a890-6ee7-41bc-b0bd-1ecc430024c9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_008580" fbc:label="XFCFBP8418_008580" fbc:name="XFCFBP8418_008580" metaid="f9601fbe-a139-4382-a6f3-2fed5262e5fd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009670" fbc:label="XFCFBP8418_009670" fbc:name="XFCFBP8418_009670" metaid="_2cc4a89b-d8fa-4c02-b6be-11a9049ed033"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009790" fbc:label="XFCFBP8418_009790" fbc:name="XFCFBP8418_009790" metaid="_8b6598ac-52b2-4849-bd4c-c41c66f1b833"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007250" fbc:label="XFCFBP8418_007250" fbc:name="XFCFBP8418_007250" metaid="e18ea72f-3354-4f0a-bacb-dc794905140c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023860" fbc:label="XFCFBP8418_023860" fbc:name="XFCFBP8418_023860" metaid="_1308da9e-231e-4046-bfec-3beb0687f028"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020350" fbc:label="XFCFBP8418_020350" fbc:name="XFCFBP8418_020350" metaid="_59634916-dd72-49f7-a1ad-88e81c53c424"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024950" fbc:label="XFCFBP8418_024950" fbc:name="XFCFBP8418_024950" metaid="a2dbcbdb-b558-428c-a6ad-1cea77c18a9f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022890" fbc:label="XFCFBP8418_022890" fbc:name="XFCFBP8418_022890" metaid="_667fb5d2-263d-4c79-a57a-71ffbc1c20ff"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020230" fbc:label="XFCFBP8418_020230" fbc:name="XFCFBP8418_020230" metaid="_45c430c0-3be6-4fc4-a4fc-c4c229bdbcf4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021440" fbc:label="XFCFBP8418_021440" fbc:name="XFCFBP8418_021440" metaid="_659c097d-3b27-4f6a-87a8-12745eb8e021"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023980" fbc:label="XFCFBP8418_023980" fbc:name="XFCFBP8418_023980" metaid="f9b7fd35-6eed-4c89-b6bc-1d930cca74dc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023600" fbc:label="XFCFBP8418_023600" fbc:name="XFCFBP8418_023600" metaid="_2582a0cb-bd4c-410c-aa36-1efe9e4c51bf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024810" fbc:label="XFCFBP8418_024810" fbc:name="XFCFBP8418_024810" metaid="_304e1ca4-bf8f-4e5e-b853-d713ba7b6566"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020210" fbc:label="XFCFBP8418_020210" fbc:name="XFCFBP8418_020210" metaid="_81c41356-592c-45bf-b773-691e7cd204a5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021420" fbc:label="XFCFBP8418_021420" fbc:name="XFCFBP8418_021420" metaid="e4104578-60bf-4ba1-99ba-185bfa8a11c3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023840" fbc:label="XFCFBP8418_023840" fbc:name="XFCFBP8418_023840" metaid="_78a41df0-b0af-431e-a9b0-c087e2487184"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019240" fbc:label="XFCFBP8418_019240" fbc:name="XFCFBP8418_019240" metaid="_56cd2a82-a317-4d21-b378-b50c00f05a51"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018150" fbc:label="XFCFBP8418_018150" fbc:name="XFCFBP8418_018150" metaid="ce418af6-1f89-42ae-9f27-7049d7f34739"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000740" fbc:label="XFCFBP8418_000740" fbc:name="XFCFBP8418_000740" metaid="_9cb2b8c2-d5c7-4367-96a9-04949af50168"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002800" fbc:label="XFCFBP8418_002800" fbc:name="XFCFBP8418_002800" metaid="_2bb26670-3c46-4815-a7b9-91018dfb7664"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011760" fbc:label="XFCFBP8418_011760" fbc:name="XFCFBP8418_011760" metaid="_540d429f-ffbf-4766-8abe-a498596d8410"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010550" fbc:label="XFCFBP8418_010550" fbc:name="XFCFBP8418_010550" metaid="_53aee272-92c2-4dbd-b569-3ee2f6c2d4d7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010420" fbc:label="XFCFBP8418_010420" fbc:name="XFCFBP8418_010420" metaid="b4e8263c-e6a3-4f37-93f7-6ea7256a1fe7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012840" fbc:label="XFCFBP8418_012840" fbc:name="XFCFBP8418_012840" metaid="_9713f688-1d6c-4c9c-bb16-8e69349c7811"/> + <fbc:geneProduct fbc:id="XFCFBP8418_006050" fbc:label="XFCFBP8418_006050" fbc:name="XFCFBP8418_006050" metaid="ee9bb37a-2e13-4b0e-a470-af5665a6561b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007260" fbc:label="XFCFBP8418_007260" fbc:name="XFCFBP8418_007260" metaid="_6a725864-6d79-42d5-a6ea-de73e4994260"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000870" fbc:label="XFCFBP8418_000870" fbc:name="XFCFBP8418_000870" metaid="ae943569-771e-4dcc-9448-5faf24e54e20"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007140" fbc:label="XFCFBP8418_007140" fbc:name="XFCFBP8418_007140" metaid="_4f80c0f6-6a6e-410b-95ae-db278dc082c2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020460" fbc:label="XFCFBP8418_020460" fbc:name="XFCFBP8418_020460" metaid="b269bb85-c15a-4226-9d74-b0da03c2460c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023970" fbc:label="XFCFBP8418_023970" fbc:name="XFCFBP8418_023970" metaid="fe0b616c-cc44-4084-bcf1-f7bcd381b85a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021670" fbc:label="XFCFBP8418_021670" fbc:name="XFCFBP8418_021670" metaid="_51a38aeb-3bb3-4ca0-b1b7-a0a059eb8f29"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020220" fbc:label="XFCFBP8418_020220" fbc:name="XFCFBP8418_020220" metaid="df8f75d9-575c-4824-a335-27a078caea48"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021550" fbc:label="XFCFBP8418_021550" fbc:name="XFCFBP8418_021550" metaid="a2c65090-c229-41f0-ad8d-2b085b1f63b2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024720" fbc:label="XFCFBP8418_024720" fbc:name="XFCFBP8418_024720" metaid="d3fe1ce0-0b54-400e-bfc3-aaee6d17b206"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002810" fbc:label="XFCFBP8418_002810" fbc:name="XFCFBP8418_002810" metaid="_84869037-8ec9-46f7-9fa8-a95942e9648c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001720" fbc:label="XFCFBP8418_001720" fbc:name="XFCFBP8418_001720" metaid="b98edc71-0135-470e-aa18-a2fce5e65f5a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019130" fbc:label="XFCFBP8418_019130" fbc:name="XFCFBP8418_019130" metaid="_68278259-e9cf-4818-aaab-6a8c64ded20f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003900" fbc:label="XFCFBP8418_003900" fbc:name="XFCFBP8418_003900" metaid="_7261e30e-88b3-4dd3-9540-e00fe7f02b4e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002930" fbc:label="XFCFBP8418_002930" fbc:name="XFCFBP8418_002930" metaid="d35389bb-235c-4fb5-84f0-1ac11a471282"/> + <fbc:geneProduct fbc:id="XFCFBP8418_005090" fbc:label="XFCFBP8418_005090" fbc:name="XFCFBP8418_005090" metaid="_21668add-865b-45dc-b108-47bbb270a5b7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010560" fbc:label="XFCFBP8418_010560" fbc:name="XFCFBP8418_010560" metaid="_00851fba-7766-4aa3-82ce-cb42dc3ab20d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011400" fbc:label="XFCFBP8418_011400" fbc:name="XFCFBP8418_011400" metaid="bdc808ce-ef7e-4aa7-948b-2bb08064502c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000880" fbc:label="XFCFBP8418_000880" fbc:name="XFCFBP8418_000880" metaid="bbd65aa5-4023-4264-a843-05931444de15"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007390" fbc:label="XFCFBP8418_007390" fbc:name="XFCFBP8418_007390" metaid="_8796c952-3c3d-4a86-875b-4d6dfd5bf7b8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_009690" fbc:label="XFCFBP8418_009690" fbc:name="XFCFBP8418_009690" metaid="_8651f10d-8c78-401b-a631-28224fd086f3"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022790" fbc:label="XFCFBP8418_022790" fbc:name="XFCFBP8418_022790" metaid="_5cd0d8a1-56e8-49fc-82ae-08e3a2914795"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007150" fbc:label="XFCFBP8418_007150" fbc:name="XFCFBP8418_007150" metaid="ba678625-3a88-4038-b3a6-6462c52c3c0c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020370" fbc:label="XFCFBP8418_020370" fbc:name="XFCFBP8418_020370" metaid="fed7b3eb-14e6-4681-8066-eebf749185be"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000640" fbc:label="XFCFBP8418_000640" fbc:name="XFCFBP8418_000640" metaid="_93cfb692-6747-4a2d-a336-2706da4ae00c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021340" fbc:label="XFCFBP8418_021340" fbc:name="XFCFBP8418_021340" metaid="_2052b095-41cd-4f2e-a130-2b1a7c775199"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023640" fbc:label="XFCFBP8418_023640" fbc:name="XFCFBP8418_023640" metaid="_6403aadf-5dae-4528-aa38-3653f56604c4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025940" fbc:label="XFCFBP8418_025940" fbc:name="XFCFBP8418_025940" metaid="b97d2453-ca18-4750-91cf-b1e3855125a7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021460" fbc:label="XFCFBP8418_021460" fbc:name="XFCFBP8418_021460" metaid="_07bdb74c-b4af-4839-b8c6-73a56eb75283"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020250" fbc:label="XFCFBP8418_020250" fbc:name="XFCFBP8418_020250" metaid="_4c865f57-950b-4a33-bc94-3cc27545bd9b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024850" fbc:label="XFCFBP8418_024850" fbc:name="XFCFBP8418_024850" metaid="dc13366f-1cbb-4c3f-b4f1-0ce27a394e13"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021100" fbc:label="XFCFBP8418_021100" fbc:name="XFCFBP8418_021100" metaid="_9c2658a4-3484-4dfd-af5d-59e003a3665d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021200" fbc:label="XFCFBP8418_021200" fbc:name="XFCFBP8418_021200" metaid="_87fd6306-7708-4fdb-be14-4666ca52c481"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023620" fbc:label="XFCFBP8418_023620" fbc:name="XFCFBP8418_023620" metaid="e2e046e2-96dd-44b9-a7e1-98c0cf480c61"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024710" fbc:label="XFCFBP8418_024710" fbc:name="XFCFBP8418_024710" metaid="_5f88ddca-d60a-4190-8aac-ce1ad01dd75e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024830" fbc:label="XFCFBP8418_024830" fbc:name="XFCFBP8418_024830" metaid="_34a98f14-e1cf-43b0-b988-2eea4b49cf16"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002940" fbc:label="XFCFBP8418_002940" fbc:name="XFCFBP8418_002940" metaid="_314c13ce-b352-434e-93ac-bcb4d4b963ce"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002700" fbc:label="XFCFBP8418_002700" fbc:name="XFCFBP8418_002700" metaid="_277aaac0-c8ec-4dc5-8cd4-833e612b1d46"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012870" fbc:label="XFCFBP8418_012870" fbc:name="XFCFBP8418_012870" metaid="_00eff5db-5e5d-4291-80a4-a59028fdcc65"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010210" fbc:label="XFCFBP8418_010210" fbc:name="XFCFBP8418_010210" metaid="_63e5a0fd-eac2-41a2-9b70-c4c288f58cfb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010570" fbc:label="XFCFBP8418_010570" fbc:name="XFCFBP8418_010570" metaid="d2e24758-a3b3-48e3-b608-c6bb3282a7a2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012500" fbc:label="XFCFBP8418_012500" fbc:name="XFCFBP8418_012500" metaid="_948ac07a-77ac-4d92-9ca7-ba3805401292"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000770" fbc:label="XFCFBP8418_000770" fbc:name="XFCFBP8418_000770" metaid="_4fcace10-bfae-4c85-9d53-ba3f463cc87c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007280" fbc:label="XFCFBP8418_007280" fbc:name="XFCFBP8418_007280" metaid="a5a2cfcf-3d74-49f8-a131-92a01cb20d85"/> + <fbc:geneProduct fbc:id="No_Assignment2" fbc:label="No_Assignment2" fbc:name="No_Assignment2" metaid="_8e363e90-8dd0-48ec-939d-fd11b66afd23"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002950" fbc:label="XFCFBP8418_002950" fbc:name="XFCFBP8418_002950" metaid="e310f09e-0504-49ed-9686-cb7974f90360"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000890" fbc:label="XFCFBP8418_000890" fbc:name="XFCFBP8418_000890" metaid="f3a66ad4-0f37-4214-af9e-873fb61180ae"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000650" fbc:label="XFCFBP8418_000650" fbc:name="XFCFBP8418_000650" metaid="_406baabf-1904-435e-8d50-a3f80917dc11"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020240" fbc:label="XFCFBP8418_020240" fbc:name="XFCFBP8418_020240" metaid="_0c8de81c-d16e-4b97-a9b6-c3607249d9f4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024840" fbc:label="XFCFBP8418_024840" fbc:name="XFCFBP8418_024840" metaid="_8051e251-c17f-4afb-8eca-c109de14e8ab"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021450" fbc:label="XFCFBP8418_021450" fbc:name="XFCFBP8418_021450" metaid="efe0556b-406c-4fa9-9711-5ccb60cbf071"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020360" fbc:label="XFCFBP8418_020360" fbc:name="XFCFBP8418_020360" metaid="f4a0c5ca-0c55-4756-9363-e20f1571335a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023630" fbc:label="XFCFBP8418_023630" fbc:name="XFCFBP8418_023630" metaid="_008e1dc3-fb8e-488e-a846-4f4279d34023"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021330" fbc:label="XFCFBP8418_021330" fbc:name="XFCFBP8418_021330" metaid="_0f6b9dfd-583f-45bb-a29f-11c56c7f9adf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025955" fbc:label="XFCFBP8418_025955" fbc:name="XFCFBP8418_025955" metaid="_2510c364-65af-4b29-9327-480ab2698c2a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025954" fbc:label="XFCFBP8418_025954" fbc:name="XFCFBP8418_025954" metaid="_2a764f49-ed4e-44e0-b1b8-8d5e71381e43"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025953" fbc:label="XFCFBP8418_025953" fbc:name="XFCFBP8418_025953" metaid="b8461f30-8f52-4b71-8391-da4dc64f2d0c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025952" fbc:label="XFCFBP8418_025952" fbc:name="XFCFBP8418_025952" metaid="_50f1558b-73da-42e8-b699-9d7310cbbb51"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002710" fbc:label="XFCFBP8418_002710" fbc:name="XFCFBP8418_002710" metaid="afeead46-196c-41f0-8523-7e2b923e69cd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026800" fbc:label="XFCFBP8418_026800" fbc:name="XFCFBP8418_026800" metaid="dbf6c5b5-44c9-48e6-9d70-ea475cdd1199"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025958" fbc:label="XFCFBP8418_025958" fbc:name="XFCFBP8418_025958" metaid="_467fc7a3-cd2b-4951-8ea0-6f63d2a1ddf9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025957" fbc:label="XFCFBP8418_025957" fbc:name="XFCFBP8418_025957" metaid="_0902a677-7145-4813-a942-c8ae796e98dd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025956" fbc:label="XFCFBP8418_025956" fbc:name="XFCFBP8418_025956" metaid="_07361964-2dad-43dc-95cf-0f8fa4f8b3a9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011310" fbc:label="XFCFBP8418_011310" fbc:name="XFCFBP8418_011310" metaid="_7f4e2541-cd59-4021-a6b6-a802bec70fda"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010100" fbc:label="XFCFBP8418_010100" fbc:name="XFCFBP8418_010100" metaid="_9ade6ec5-abdf-465e-8567-efdec1fe52c2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010460" fbc:label="XFCFBP8418_010460" fbc:name="XFCFBP8418_010460" metaid="_3dbee0f8-d99b-4c7a-9f29-baa695e8ec96"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011300" fbc:label="XFCFBP8418_011300" fbc:name="XFCFBP8418_011300" metaid="f9db817f-f54b-4915-aaeb-056c873377ab"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014810" fbc:label="XFCFBP8418_014810" fbc:name="XFCFBP8418_014810" metaid="_5c0e842c-8662-46d3-834e-0aa4f727ac28"/> + <fbc:geneProduct fbc:id="XFCFBP8418_014930" fbc:label="XFCFBP8418_014930" fbc:name="XFCFBP8418_014930" metaid="_5cd53500-3e68-42b3-ba5e-be6727e9e3da"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002960" fbc:label="XFCFBP8418_002960" fbc:name="XFCFBP8418_002960" metaid="_7507c197-902d-4cca-b659-2f51d38d16ec"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024990" fbc:label="XFCFBP8418_024990" fbc:name="XFCFBP8418_024990" metaid="ea25cde0-a257-4bf1-8f3e-491882c2c1a5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000660" fbc:label="XFCFBP8418_000660" fbc:name="XFCFBP8418_000660" metaid="_6140e34e-fc05-4a84-93dd-068f68f67d35"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020390" fbc:label="XFCFBP8418_020390" fbc:name="XFCFBP8418_020390" metaid="_498dbc10-e664-4f33-873e-e8fb28cfe1ac"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022570" fbc:label="XFCFBP8418_022570" fbc:name="XFCFBP8418_022570" metaid="ca931cb3-d635-403d-8de1-ce1a4e6a65f2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000540" fbc:label="XFCFBP8418_000540" fbc:name="XFCFBP8418_000540" metaid="_590f01b9-c2a6-4582-a03c-13e611a65ac4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020270" fbc:label="XFCFBP8418_020270" fbc:name="XFCFBP8418_020270" metaid="_56424929-6d76-4722-b9cb-e9f6ca8a0e1e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021480" fbc:label="XFCFBP8418_021480" fbc:name="XFCFBP8418_021480" metaid="e53ead2b-3062-40d5-9da2-b181ec3ee075"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025720" fbc:label="XFCFBP8418_025720" fbc:name="XFCFBP8418_025720" metaid="b5d02b4f-cf01-4af7-b30b-8954cbb5ef9b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021120" fbc:label="XFCFBP8418_021120" fbc:name="XFCFBP8418_021120" metaid="_7d1b223e-d9ca-4b53-9815-fd36e363e10a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025700" fbc:label="XFCFBP8418_025700" fbc:name="XFCFBP8418_025700" metaid="e58bd30e-51ed-423b-b7b6-3a67224e5c9c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024610" fbc:label="XFCFBP8418_024610" fbc:name="XFCFBP8418_024610" metaid="_97b3a2e2-3844-4863-89df-fa744b396ea2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004900" fbc:label="XFCFBP8418_004900" fbc:name="XFCFBP8418_004900" metaid="b3fe439f-2a72-4b94-8144-f1a190757884"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001510" fbc:label="XFCFBP8418_001510" fbc:name="XFCFBP8418_001510" metaid="f2b27bd0-4015-4e77-a451-433eb07a277d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002720" fbc:label="XFCFBP8418_002720" fbc:name="XFCFBP8418_002720" metaid="afaebac6-4c6e-44ef-a400-45a1ec547edf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003930" fbc:label="XFCFBP8418_003930" fbc:name="XFCFBP8418_003930" metaid="_27a00736-0056-4811-b748-da93597da211"/> + <fbc:geneProduct fbc:id="XFCFBP8418_007180" fbc:label="XFCFBP8418_007180" fbc:name="XFCFBP8418_007180" metaid="_6a021a4e-6654-4d2e-9597-33dd6c250590"/> + <fbc:geneProduct fbc:id="XFCFBP8418_010590" fbc:label="XFCFBP8418_010590" fbc:name="XFCFBP8418_010590" metaid="f622a452-ef10-405b-95bc-65030e6ce73b"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012410" fbc:label="XFCFBP8418_012410" fbc:name="XFCFBP8418_012410" metaid="ebf42e22-08b3-44f6-b0d2-5d28ad7ece09"/> + <fbc:geneProduct fbc:id="XFCFBP8418_011560" fbc:label="XFCFBP8418_011560" fbc:name="XFCFBP8418_011560" metaid="_1a49c128-8e75-447f-a9df-604c97544f9f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012890" fbc:label="XFCFBP8418_012890" fbc:name="XFCFBP8418_012890" metaid="e85f0bed-15d1-4532-8cf3-71e176908aa1"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015910" fbc:label="XFCFBP8418_015910" fbc:name="XFCFBP8418_015910" metaid="ed7a7c0a-54d3-4ac9-87b9-2d86fa34484d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_018190" fbc:label="XFCFBP8418_018190" fbc:name="XFCFBP8418_018190" metaid="_3ab57745-8839-4535-9774-2f414b621847"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000550" fbc:label="XFCFBP8418_000550" fbc:name="XFCFBP8418_000550" metaid="_84cbfa1f-8717-4f59-b76c-89a00672f284"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003940" fbc:label="XFCFBP8418_003940" fbc:name="XFCFBP8418_003940" metaid="_6a6260df-88fc-4943-b58c-7ab73144c684"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020260" fbc:label="XFCFBP8418_020260" fbc:name="XFCFBP8418_020260" metaid="_650b8eb5-a277-4571-969c-e2d795274c1d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000310" fbc:label="XFCFBP8418_000310" fbc:name="XFCFBP8418_000310" metaid="d706cce0-32a1-460b-99a0-fc4efe743362"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020380" fbc:label="XFCFBP8418_020380" fbc:name="XFCFBP8418_020380" metaid="b93a2dda-8d07-49f2-b567-73b0b247aab2"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025951" fbc:label="XFCFBP8418_025951" fbc:name="XFCFBP8418_025951" metaid="_917de50d-484b-4fbd-808e-eaab63dc70ea"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024620" fbc:label="XFCFBP8418_024620" fbc:name="XFCFBP8418_024620" metaid="_0a3a0461-0e56-42df-a65a-66d1474598ba"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021350" fbc:label="XFCFBP8418_021350" fbc:name="XFCFBP8418_021350" metaid="f56b2db6-3c3b-447e-aff0-d0bfada5e9bb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025950" fbc:label="XFCFBP8418_025950" fbc:name="XFCFBP8418_025950" metaid="_839d0956-c541-4c16-a189-ddf49c2b73b8"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022200" fbc:label="XFCFBP8418_022200" fbc:name="XFCFBP8418_022200" metaid="_6e2ef2e2-87cc-4204-9b03-3468ccd9c1cf"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022440" fbc:label="XFCFBP8418_022440" fbc:name="XFCFBP8418_022440" metaid="_50e113d8-85e4-4fc0-acc4-0f3f34e201b9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023650" fbc:label="XFCFBP8418_023650" fbc:name="XFCFBP8418_023650" metaid="a340789e-eadf-4143-8036-4bfa77ab5427"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027910" fbc:label="XFCFBP8418_027910" fbc:name="XFCFBP8418_027910" metaid="be56024a-5bf2-4c03-af07-284640fe986c"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002610" fbc:label="XFCFBP8418_002610" fbc:name="XFCFBP8418_002610" metaid="f31c8e11-1f57-4f35-874a-aed02384039f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003820" fbc:label="XFCFBP8418_003820" fbc:name="XFCFBP8418_003820" metaid="_4c641716-3197-4c6c-88c2-70d02fdac033"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003700" fbc:label="XFCFBP8418_003700" fbc:name="XFCFBP8418_003700" metaid="cefafbb4-cf34-4bac-81e5-48ff7ba8bb13"/> + <fbc:geneProduct fbc:id="XFCFBP8418_012420" fbc:label="XFCFBP8418_012420" fbc:name="XFCFBP8418_012420" metaid="_603cf11e-581f-4cdf-b40d-5efa5c521c70"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015800" fbc:label="XFCFBP8418_015800" fbc:name="XFCFBP8418_015800" metaid="_5bc53423-801f-4eee-a2d2-e0e9a5fc38ac"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023680" fbc:label="XFCFBP8418_023680" fbc:name="XFCFBP8418_023680" metaid="_1c400afd-fa07-4503-b396-8342e4df3da4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024890" fbc:label="XFCFBP8418_024890" fbc:name="XFCFBP8418_024890" metaid="_9906003f-f637-460b-94dd-49d0fd8f1412"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003830" fbc:label="XFCFBP8418_003830" fbc:name="XFCFBP8418_003830" metaid="_40b6881b-0254-4e6a-b405-88f154c7c88f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020290" fbc:label="XFCFBP8418_020290" fbc:name="XFCFBP8418_020290" metaid="_535864cd-959e-4774-9223-c15d6aabcbbb"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022350" fbc:label="XFCFBP8418_022350" fbc:name="XFCFBP8418_022350" metaid="c3090db3-18ef-4a11-a59c-ade326279ed0"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000560" fbc:label="XFCFBP8418_000560" fbc:name="XFCFBP8418_000560" metaid="_8267f696-7d64-49a5-a848-c51985ead21f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001410" fbc:label="XFCFBP8418_001410" fbc:name="XFCFBP8418_001410" metaid="_4f2d4b24-9245-4340-8737-08e224233711"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002620" fbc:label="XFCFBP8418_002620" fbc:name="XFCFBP8418_002620" metaid="c9ae4702-1c8f-463b-9b93-6494cc3fb943"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000200" fbc:label="XFCFBP8418_000200" fbc:name="XFCFBP8418_000200" metaid="_1fc18107-28d7-4410-ad80-ac0b162f9acd"/> + <fbc:geneProduct fbc:id="XFCFBP8418_026710" fbc:label="XFCFBP8418_026710" fbc:name="XFCFBP8418_026710" metaid="_7269de46-bb60-45cb-807a-2b0f02a25827"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025620" fbc:label="XFCFBP8418_025620" fbc:name="XFCFBP8418_025620" metaid="da8961d8-d5da-41be-8c16-78f832e84d57"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024530" fbc:label="XFCFBP8418_024530" fbc:name="XFCFBP8418_024530" metaid="_4de0b22d-dfbc-44d2-9212-fd9e10c362e9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022230" fbc:label="XFCFBP8418_022230" fbc:name="XFCFBP8418_022230" metaid="d9f45082-09b9-44cc-b883-84d3d91433ad"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025600" fbc:label="XFCFBP8418_025600" fbc:name="XFCFBP8418_025600" metaid="_159aaf1f-8e50-4419-b270-063093843d22"/> + <fbc:geneProduct fbc:id="XFCFBP8418_027900" fbc:label="XFCFBP8418_027900" fbc:name="XFCFBP8418_027900" metaid="f31ebb15-359b-44d2-b526-c206333fbe7a"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003710" fbc:label="XFCFBP8418_003710" fbc:name="XFCFBP8418_003710" metaid="ad1ac4df-7fb0-477d-9d7d-f876ee5bc703"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004800" fbc:label="XFCFBP8418_004800" fbc:name="XFCFBP8418_004800" metaid="e744a5a8-80e0-4d7c-b4b5-2af34160afff"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015820" fbc:label="XFCFBP8418_015820" fbc:name="XFCFBP8418_015820" metaid="_2f4de6cb-ec12-47c2-a7a9-747ceb6c19a5"/> + <fbc:geneProduct fbc:id="XFCFBP8418_015810" fbc:label="XFCFBP8418_015810" fbc:name="XFCFBP8418_015810" metaid="b245e80f-6458-49f1-9009-9b7fcef1a2aa"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021490" fbc:label="XFCFBP8418_021490" fbc:name="XFCFBP8418_021490" metaid="_61f06b9f-4f2f-4dc2-aa3a-283b75342f7d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_020280" fbc:label="XFCFBP8418_020280" fbc:name="XFCFBP8418_020280" metaid="b12d91f1-12f5-49d4-b015-23327225f3e7"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024880" fbc:label="XFCFBP8418_024880" fbc:name="XFCFBP8418_024880" metaid="ede3afb3-b595-4b1a-b24a-aebdec76686f"/> + <fbc:geneProduct fbc:id="XFCFBP8418_000330" fbc:label="XFCFBP8418_000330" fbc:name="XFCFBP8418_000330" metaid="_010446bc-b586-4f68-b476-f83d3161074d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_019180" fbc:label="XFCFBP8418_019180" fbc:name="XFCFBP8418_019180" metaid="c212ab48-5a0f-44da-8fb5-bef9457ee71e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_004930" fbc:label="XFCFBP8418_004930" fbc:name="XFCFBP8418_004930" metaid="_24b7d05a-8ede-4c88-b495-1fac9a7f07cc"/> + <fbc:geneProduct fbc:id="XFCFBP8418_001660" fbc:label="XFCFBP8418_001660" fbc:name="XFCFBP8418_001660" metaid="_903991ca-34cc-4199-934e-a125ee6f0d23"/> + <fbc:geneProduct fbc:id="XFCFBP8418_023670" fbc:label="XFCFBP8418_023670" fbc:name="XFCFBP8418_023670" metaid="_08bd99a0-2c63-472f-9af6-64f88dd41224"/> + <fbc:geneProduct fbc:id="XFCFBP8418_003720" fbc:label="XFCFBP8418_003720" fbc:name="XFCFBP8418_003720" metaid="_701e8f64-369b-4e8e-bb01-ac2834eb8084"/> + <fbc:geneProduct fbc:id="XFCFBP9418_023100" fbc:label="XFCFBP9418_023100" fbc:name="XFCFBP9418_023100" metaid="ad6c8faf-aeaf-474c-9732-382b4d8b01a4"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002510" fbc:label="XFCFBP8418_002510" fbc:name="XFCFBP8418_002510" metaid="_0631785a-f615-4b80-bdf7-e6a914e0ca08"/> + <fbc:geneProduct fbc:id="XFCFBP8418_002870" fbc:label="XFCFBP8418_002870" fbc:name="XFCFBP8418_002870" metaid="_277f51db-54d5-4447-ae5a-e724ada639ce"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025610" fbc:label="XFCFBP8418_025610" fbc:name="XFCFBP8418_025610" metaid="b2a3f5bd-9cfe-4793-98e9-9457deb2243e"/> + <fbc:geneProduct fbc:id="XFCFBP8418_025730" fbc:label="XFCFBP8418_025730" fbc:name="XFCFBP8418_025730" metaid="_138c3720-23d1-45ae-b490-a116ee2c7d45"/> + <fbc:geneProduct fbc:id="XFCFBP8418_021130" fbc:label="XFCFBP8418_021130" fbc:name="XFCFBP8418_021130" metaid="_209f7951-2857-40c7-9116-4b337d6b5d85"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024520" fbc:label="XFCFBP8418_024520" fbc:name="XFCFBP8418_024520" metaid="_2d645272-561c-4c94-83e2-6b75891d65c9"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024640" fbc:label="XFCFBP8418_024640" fbc:name="XFCFBP8418_024640" metaid="b45c7fec-afbe-4ed8-a1eb-f0f31285c699"/> + <fbc:geneProduct fbc:id="XFCFBP8418_024760" fbc:label="XFCFBP8418_024760" fbc:name="XFCFBP8418_024760" metaid="f21039d0-00e1-4550-b83b-9fc77c59163d"/> + <fbc:geneProduct fbc:id="XFCFBP8418_022220" fbc:label="XFCFBP8418_022220" fbc:name="XFCFBP8418_022220" metaid="_85236683-afe2-4b02-b931-7e34fe65e20e"/> + </fbc:listOfGeneProducts> + <groups:listOfGroups> + <groups:group groups:id="Pyruvate_Metabolism" groups:kind="classification" groups:name="Pyruvate_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_OAADC"/> + <groups:member groups:idRef="R_ACS"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glycolysis_Gluconeogenesis" groups:kind="classification" groups:name="Glycolysis_Gluconeogenesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PGM"/> + <groups:member groups:idRef="R_PFK"/> + <groups:member groups:idRef="R_FBP"/> + <groups:member groups:idRef="R_PGK"/> + <groups:member groups:idRef="R_PDH"/> + <groups:member groups:idRef="R_PPS"/> + <groups:member groups:idRef="R_HEX1"/> + <groups:member groups:idRef="R_PGI"/> + <groups:member groups:idRef="R_TPI"/> + <groups:member groups:idRef="R_GAPD"/> + <groups:member groups:idRef="R_ENO"/> + <groups:member groups:idRef="R_FBA"/> + <groups:member groups:idRef="R_PYK"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="tRNA_Charging" groups:kind="classification" groups:name="tRNA_Charging"> + <groups:listOfMembers> + <groups:member groups:idRef="R_TRPTRS"/> + <groups:member groups:idRef="R_THRTRS"/> + <groups:member groups:idRef="R_TYRTRS"/> + <groups:member groups:idRef="R_ALATRS"/> + <groups:member groups:idRef="R_SERTRS"/> + <groups:member groups:idRef="R_HISTRS"/> + <groups:member groups:idRef="R_PROTRS"/> + <groups:member groups:idRef="R_VALTRS"/> + <groups:member groups:idRef="R_ARGTRS"/> + <groups:member groups:idRef="R_METTRS"/> + <groups:member groups:idRef="R_LYSTRS"/> + <groups:member groups:idRef="R_ILETRS"/> + <groups:member groups:idRef="R_LEUTRS"/> + <groups:member groups:idRef="R_GLNTRS"/> + <groups:member groups:idRef="R_ASPTRS"/> + <groups:member groups:idRef="R_CYSTRS"/> + <groups:member groups:idRef="R_ASNTRS"/> + <groups:member groups:idRef="R_SERTRS2"/> + <groups:member groups:idRef="R_FMETTRS"/> + <groups:member groups:idRef="R_GLUTRS"/> + <groups:member groups:idRef="R_GLUTRR"/> + <groups:member groups:idRef="R_PHETRS"/> + <groups:member groups:idRef="R_GLYTRS"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Electron_transfer" groups:kind="classification" groups:name="Electron_transfer"> + <groups:listOfMembers> + <groups:member groups:idRef="R_DSBDR"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Citric_Acid_Cycle" groups:kind="classification" groups:name="Citric_Acid_Cycle"> + <groups:listOfMembers> + <groups:member groups:idRef="R_MDH2"/> + <groups:member groups:idRef="R_SUCD1"/> + <groups:member groups:idRef="R_AKGDH"/> + <groups:member groups:idRef="R_ICDHyr2"/> + <groups:member groups:idRef="R_ICDHyr1"/> + <groups:member groups:idRef="R_CS"/> + <groups:member groups:idRef="R_MDH"/> + <groups:member groups:idRef="R_ACONTa"/> + <groups:member groups:idRef="R_ACONTb"/> + <groups:member groups:idRef="R_SUCOAS"/> + <groups:member groups:idRef="R_FUM"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Superoxide_radicals_degradation" groups:kind="classification" groups:name="Superoxide_radicals_degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_CAT"/> + <groups:member groups:idRef="R_GTHPe"/> + <groups:member groups:idRef="R_THIORDXi"/> + <groups:member groups:idRef="R_GTHP"/> + <groups:member groups:idRef="R_SPODM"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Purine_and_Pyrimidine_Biosynthesis" groups:kind="classification" groups:name="Purine_and_Pyrimidine_Biosynthesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_GLUPRT"/> + <groups:member groups:idRef="R_AIRC2r"/> + <groups:member groups:idRef="R_PRAGSr"/> + <groups:member groups:idRef="R_CTPS2"/> + <groups:member groups:idRef="R_PRASCS"/> + <groups:member groups:idRef="R_ADSL2r"/> + <groups:member groups:idRef="R_AICART"/> + <groups:member groups:idRef="R_ADSL1r"/> + <groups:member groups:idRef="R_PRFGS"/> + <groups:member groups:idRef="R_IMPC"/> + <groups:member groups:idRef="R_IMPD"/> + <groups:member groups:idRef="R_PRAIS"/> + <groups:member groups:idRef="R_ADSS"/> + <groups:member groups:idRef="R_DHORD2"/> + <groups:member groups:idRef="R_ORPT"/> + <groups:member groups:idRef="R_GARFT"/> + <groups:member groups:idRef="R_OMPDC"/> + <groups:member groups:idRef="R_AIRC3"/> + <groups:member groups:idRef="R_ASPCTn"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Purine_biosynthesis" groups:kind="classification" groups:name="Purine_biosynthesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_GMPS2"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Alternate_Carbon_Metabolism" groups:kind="classification" groups:name="Alternate_Carbon_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_dextrin_DEC_e_"/> + <groups:member groups:idRef="R_INSEPIH"/> + <groups:member groups:idRef="R_SPS"/> + <groups:member groups:idRef="R_GLYKr"/> + <groups:member groups:idRef="R_DGLUISO"/> + <groups:member groups:idRef="R_GLTN2pp"/> + <groups:member groups:idRef="R_G2PP"/> + <groups:member groups:idRef="R_X5PL3E"/> + <groups:member groups:idRef="R_XYLK2"/> + <groups:member groups:idRef="R_G3PD2"/> + <groups:member groups:idRef="R_UDPG4E"/> + <groups:member groups:idRef="R_PGLYCP"/> + <groups:member groups:idRef="R_INSDH"/> + <groups:member groups:idRef="R_ADNUC"/> + <groups:member groups:idRef="R_DTARTD"/> + <groups:member groups:idRef="R_UGLT"/> + <groups:member groups:idRef="R_ALCD2y"/> + <groups:member groups:idRef="R_6PDDGLUCA"/> + <groups:member groups:idRef="R_G6PDA"/> + <groups:member groups:idRef="R_DMPO_LACCASE"/> + <groups:member groups:idRef="R_LACZ"/> + <groups:member groups:idRef="R_SSALy"/> + <groups:member groups:idRef="R_MMSAD3"/> + <groups:member groups:idRef="R_CHTNDA2"/> + <groups:member groups:idRef="R_OCOAT1r"/> + <groups:member groups:idRef="R_PFK_2"/> + <groups:member groups:idRef="R_BHEXAMD"/> + <groups:member groups:idRef="R_MCITL2"/> + <groups:member groups:idRef="R_5DGLCNR"/> + <groups:member groups:idRef="R_A5PISO"/> + <groups:member groups:idRef="R_ACM6PH"/> + <groups:member groups:idRef="R_RBKr"/> + <groups:member groups:idRef="R_MICITDr"/> + <groups:member groups:idRef="R_LACZpp"/> + <groups:member groups:idRef="R_DKGLUCK"/> + <groups:member groups:idRef="R_PPM"/> + <groups:member groups:idRef="R_GLCGSD_c"/> + <groups:member groups:idRef="R_XYLI1"/> + <groups:member groups:idRef="R_GDDMR"/> + <groups:member groups:idRef="R_XYLK"/> + <groups:member groups:idRef="R_ABTA"/> + <groups:member groups:idRef="R_DDGLK"/> + <groups:member groups:idRef="R_ACCOAL2r"/> + <groups:member groups:idRef="R_AACOAR"/> + <groups:member groups:idRef="R_ACGAMABCt"/> + <groups:member groups:idRef="R_TREHpp"/> + <groups:member groups:idRef="R_AGDC_r"/> + <groups:member groups:idRef="R_BHEXAMD_p"/> + <groups:member groups:idRef="R_GALKr"/> + <groups:member groups:idRef="R_DHAPT"/> + <groups:member groups:idRef="R_INS2D"/> + <groups:member groups:idRef="R_RBP4E"/> + <groups:member groups:idRef="R_ACACT1r"/> + <groups:member groups:idRef="R_CHTNA2"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Arginine_and_Proline_Metabolism" groups:kind="classification" groups:name="Arginine_and_Proline_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_UREA"/> + <groups:member groups:idRef="R_ARGSSr"/> + <groups:member groups:idRef="R_ADMDCr"/> + <groups:member groups:idRef="R_AMPTASEPG"/> + <groups:member groups:idRef="R_ACGK"/> + <groups:member groups:idRef="R_SOTA"/> + <groups:member groups:idRef="R_ARGDC"/> + <groups:member groups:idRef="R_P5CD"/> + <groups:member groups:idRef="R_SPMS"/> + <groups:member groups:idRef="R_ACOTA"/> + <groups:member groups:idRef="R_ARGN"/> + <groups:member groups:idRef="R_G5SD"/> + <groups:member groups:idRef="R_PROD2"/> + <groups:member groups:idRef="R_CBPS"/> + <groups:member groups:idRef="R_AGDI_1"/> + <groups:member groups:idRef="R_APCS"/> + <groups:member groups:idRef="R_P5CR"/> + <groups:member groups:idRef="R_P5CD1p"/> + <groups:member groups:idRef="R_ARGDCpp"/> + <groups:member groups:idRef="R_ACODA"/> + <groups:member groups:idRef="R_AGPR"/> + <groups:member groups:idRef="R_NACODA"/> + <groups:member groups:idRef="R_ARGSL"/> + <groups:member groups:idRef="R_NITL5"/> + <groups:member groups:idRef="R_OCBT"/> + <groups:member groups:idRef="R_GLU5K"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Histidine_Metabolism" groups:kind="classification" groups:name="Histidine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_HISTD"/> + <groups:member groups:idRef="R_ATPPRTr"/> + <groups:member groups:idRef="R_HISDr"/> + <groups:member groups:idRef="R_IGPDH"/> + <groups:member groups:idRef="R_IG3PS"/> + <groups:member groups:idRef="R_PRMICI"/> + <groups:member groups:idRef="R_PRPPS"/> + <groups:member groups:idRef="R_HSTPTr"/> + <groups:member groups:idRef="R_PRATPP"/> + <groups:member groups:idRef="R_HISTP"/> + <groups:member groups:idRef="R_IZPN"/> + <groups:member groups:idRef="R_PRAMPC"/> + <groups:member groups:idRef="R_URCN"/> + <groups:member groups:idRef="R_FGLU"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Tyrosine__tryptophan__and_phenylalanine_metabolism" groups:kind="classification" groups:name="Tyrosine__tryptophan__and_phenylalanine_metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PRAI"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Extracellular_exchange" groups:kind="classification" groups:name="Extracellular_exchange"> + <groups:listOfMembers> + <groups:member groups:idRef="R_DM_DAD_5"/> + <groups:member groups:idRef="R_EX_chitin_polymer_e"/> + <groups:member groups:idRef="R_DM_FOR"/> + <groups:member groups:idRef="R_EX_asp_L_e"/> + <groups:member groups:idRef="R_EX_mn2_e"/> + <groups:member groups:idRef="R_EX_arg_L_e"/> + <groups:member groups:idRef="R_EX_man_e"/> + <groups:member groups:idRef="R_EX_gam_e"/> + <groups:member groups:idRef="R_EX_glyc_e"/> + <groups:member groups:idRef="R_DM_FRMD"/> + <groups:member groups:idRef="R_EX_pro_L_e"/> + <groups:member groups:idRef="R_EX_fe2_e"/> + <groups:member groups:idRef="R_EX_glu_L_e"/> + <groups:member groups:idRef="R_EX_4abut_e"/> + <groups:member groups:idRef="R_EX_so4_e"/> + <groups:member groups:idRef="R_DM_MEOH"/> + <groups:member groups:idRef="R_EX_rib_D_e"/> + <groups:member groups:idRef="R_EX_pi_e"/> + <groups:member groups:idRef="R_EX_h_e"/> + <groups:member groups:idRef="R_EX_fru_e"/> + <groups:member groups:idRef="R_EX_cu2_e"/> + <groups:member groups:idRef="R_EX_ni2_e"/> + <groups:member groups:idRef="R_DM_GCALD"/> + <groups:member groups:idRef="R_EX_dextrin_e"/> + <groups:member groups:idRef="R_EX_pyr_e"/> + <groups:member groups:idRef="R_EX_cl_e"/> + <groups:member groups:idRef="R_EX_lys_L_e"/> + <groups:member groups:idRef="R_DM_LesA_e"/> + <groups:member groups:idRef="R_EX_glc_D_e"/> + <groups:member groups:idRef="R_EX_ala_L_e"/> + <groups:member groups:idRef="R_DM_BIOMASS_c"/> + <groups:member groups:idRef="R_EX_ac_e"/> + <groups:member groups:idRef="R_EX_mobd_e"/> + <groups:member groups:idRef="R_EX_k_e"/> + <groups:member groups:idRef="R_EX_ca2_e"/> + <groups:member groups:idRef="R_EX_o2_e"/> + <groups:member groups:idRef="R_EX_s_e"/> + <groups:member groups:idRef="R_EX_gal_e"/> + <groups:member groups:idRef="R_EX_fe3_e"/> + <groups:member groups:idRef="R_EX_gln_L_e"/> + <groups:member groups:idRef="R_EX_cobalt2_e"/> + <groups:member groups:idRef="R_EX_URA_e"/> + <groups:member groups:idRef="R_DM_ADE"/> + <groups:member groups:idRef="R_EX_his_L_e"/> + <groups:member groups:idRef="R_EX_so3_e"/> + <groups:member groups:idRef="R_EX_xyl_D_e"/> + <groups:member groups:idRef="R_EX_zn2_e"/> + <groups:member groups:idRef="R_EX_h2o_e"/> + <groups:member groups:idRef="R_DM_AMOB"/> + <groups:member groups:idRef="R_EX_co2_e"/> + <groups:member groups:idRef="R_EX_inost_e"/> + <groups:member groups:idRef="R_EX_mg2_e"/> + <groups:member groups:idRef="R_EX_cit_e"/> + <groups:member groups:idRef="R_EX_nh4_e"/> + <groups:member groups:idRef="R_DM_E4P"/> + <groups:member groups:idRef="R_EX_tre_e"/> + <groups:member groups:idRef="R_EX_orn_e"/> + <groups:member groups:idRef="R_DM_EPS_XF_e"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Anaplerotic_Reactions" groups:kind="classification" groups:name="Anaplerotic_Reactions"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ME2"/> + <groups:member groups:idRef="R_PPA2"/> + <groups:member groups:idRef="R_MALS"/> + <groups:member groups:idRef="R_ICL"/> + <groups:member groups:idRef="R_PPA"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Nucleotides_degradation" groups:kind="classification" groups:name="Nucleotides_degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PPTHpp"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Protein_disulfide_bond_transfer" groups:kind="classification" groups:name="Protein_disulfide_bond_transfer"> + <groups:listOfMembers> + <groups:member groups:idRef="R_DSBCGT"/> + <groups:member groups:idRef="R_DSBAO1"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Methylglyoxal_Metabolism" groups:kind="classification" groups:name="Methylglyoxal_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_GLYOX3"/> + <groups:member groups:idRef="R_LGTHL"/> + <groups:member groups:idRef="R_ALR2"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Murein_Recycling" groups:kind="classification" groups:name="Murein_Recycling"> + <groups:listOfMembers> + <groups:member groups:idRef="R_MDDEP3pp"/> + <groups:member groups:idRef="R_MDDEP4pp"/> + <groups:member groups:idRef="R_AGM3PApp"/> + <groups:member groups:idRef="R_4PCPpp"/> + <groups:member groups:idRef="R_UM3PL"/> + <groups:member groups:idRef="R_UM4PL"/> + <groups:member groups:idRef="R_AGMH"/> + <groups:member groups:idRef="R_AGM3Pt2pp"/> + <groups:member groups:idRef="R_MDDEP1pp"/> + <groups:member groups:idRef="R_MDDEP2pp"/> + <groups:member groups:idRef="R_MLTGY2pp"/> + <groups:member groups:idRef="R_UDCPPtppi"/> + <groups:member groups:idRef="R_MLTGY3pp"/> + <groups:member groups:idRef="R_MLTGY4pp"/> + <groups:member groups:idRef="R_AGM4PApp"/> + <groups:member groups:idRef="R_AGMt2pp"/> + <groups:member groups:idRef="R_MLDEP1pp"/> + <groups:member groups:idRef="R_MLDEP2pp"/> + <groups:member groups:idRef="R_AGM4PH"/> + <groups:member groups:idRef="R_AGM3PH"/> + <groups:member groups:idRef="R_AGM4Pt2pp"/> + <groups:member groups:idRef="R_AGM4PCPpp"/> + <groups:member groups:idRef="R_MLTGY1pp"/> + <groups:member groups:idRef="R_ANHMK"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Oxidative_Phosphorylation" groups:kind="classification" groups:name="Oxidative_Phosphorylation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ATPS4rpp"/> + <groups:member groups:idRef="R_ETFDH"/> + <groups:member groups:idRef="R_PPK2r"/> + <groups:member groups:idRef="R_TRDR"/> + <groups:member groups:idRef="R_PPKr"/> + <groups:member groups:idRef="R_NADH16pp"/> + <groups:member groups:idRef="R_CYTBO3_4pp"/> + <groups:member groups:idRef="R_SUCDi"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Transport" groups:kind="classification" groups:name="Transport"> + <groups:listOfMembers> + <groups:member groups:idRef="R_CITt10"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glycerol_Degradation" groups:kind="classification" groups:name="Glycerol_Degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_G3PD5"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Transport__Outer_Membrane" groups:kind="classification" groups:name="Transport__Outer_Membrane"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ILEtex"/> + <groups:member groups:idRef="R_FRUpts2"/> + <groups:member groups:idRef="R_MINCYCtpp"/> + <groups:member groups:idRef="R_CYStex"/> + <groups:member groups:idRef="R_GLNtex"/> + <groups:member groups:idRef="R_SPMDtex"/> + <groups:member groups:idRef="R_PROT_pe_LesA"/> + <groups:member groups:idRef="R_HYXNtex"/> + <groups:member groups:idRef="R_METDtex"/> + <groups:member groups:idRef="R_LEUtex"/> + <groups:member groups:idRef="R_PTRCtex"/> + <groups:member groups:idRef="R_ORNtex"/> + <groups:member groups:idRef="R_GLYC2Ptex"/> + <groups:member groups:idRef="R_METtex"/> + <groups:member groups:idRef="R_THRtex"/> + <groups:member groups:idRef="R_MANtex"/> + <groups:member groups:idRef="R_OCDCAtexi"/> + <groups:member groups:idRef="R_ADNtex"/> + <groups:member groups:idRef="R_ALAt2tex"/> + <groups:member groups:idRef="R_METSOX2tex"/> + <groups:member groups:idRef="R_ACt2rex"/> + <groups:member groups:idRef="R_INDOLEtex"/> + <groups:member groups:idRef="R_VALtex"/> + <groups:member groups:idRef="R_NACtex"/> + <groups:member groups:idRef="R_HIStex"/> + <groups:member groups:idRef="R_ARGtex"/> + <groups:member groups:idRef="R_GLYCt"/> + <groups:member groups:idRef="R_RFAMPtpp"/> + <groups:member groups:idRef="R_TTRCYCtpp"/> + <groups:member groups:idRef="R_TTDCAtex"/> + <groups:member groups:idRef="R_FEENTERtonex"/> + <groups:member groups:idRef="R_GALt2"/> + <groups:member groups:idRef="R_BTNt2tex"/> + <groups:member groups:idRef="R_GLYC3Ptex"/> + <groups:member groups:idRef="R_FRUtex"/> + <groups:member groups:idRef="R_FUSAtpp"/> + <groups:member groups:idRef="R_3HPPtex"/> + <groups:member groups:idRef="R_ADEtex"/> + <groups:member groups:idRef="R_GLUtex"/> + <groups:member groups:idRef="R_OCDCEAtexi"/> + <groups:member groups:idRef="R_XYLtex"/> + <groups:member groups:idRef="R_CMtpp"/> + <groups:member groups:idRef="R_FUCtex"/> + <groups:member groups:idRef="R_GLYtex"/> + <groups:member groups:idRef="R_G3PItex"/> + <groups:member groups:idRef="R_DAPtex"/> + <groups:member groups:idRef="R_ARGt2rpp"/> + <groups:member groups:idRef="R_LYSt3r"/> + <groups:member groups:idRef="R_CITt3tex"/> + <groups:member groups:idRef="R_Bztex"/> + <groups:member groups:idRef="R_HDCAtex"/> + <groups:member groups:idRef="R_METSOX1tex"/> + <groups:member groups:idRef="R_OAAtex"/> + <groups:member groups:idRef="R_DOXRBCNtpp"/> + <groups:member groups:idRef="R_PROtex"/> + <groups:member groups:idRef="R_G3PEtex"/> + <groups:member groups:idRef="R_AKGt2rtex"/> + <groups:member groups:idRef="R_14GLUCANtex"/> + <groups:member groups:idRef="R_FUMt2_2tex"/> + <groups:member groups:idRef="R_INSTtex"/> + <groups:member groups:idRef="R_TREtex"/> + <groups:member groups:idRef="R_HDCEAtexi"/> + <groups:member groups:idRef="R_GUAtex"/> + <groups:member groups:idRef="R_NOVBCNtpp"/> + <groups:member groups:idRef="R_RIBtex"/> + <groups:member groups:idRef="R_URAtex"/> + <groups:member groups:idRef="R_PHEMEtiex"/> + <groups:member groups:idRef="R_GAMtex"/> + <groups:member groups:idRef="R_SERtex"/> + <groups:member groups:idRef="R_OTOTt2_2tex"/> + <groups:member groups:idRef="R_QUIN2tex"/> + <groups:member groups:idRef="R_THYMtex"/> + <groups:member groups:idRef="R_MEOHtex"/> + <groups:member groups:idRef="R_CYSDtex"/> + <groups:member groups:idRef="R_ABUTtex"/> + <groups:member groups:idRef="R_MSO3tex"/> + <groups:member groups:idRef="R_G3PStex"/> + <groups:member groups:idRef="R_CHTNtex"/> + <groups:member groups:idRef="R_TTDCEAtexi"/> + <groups:member groups:idRef="R_DDCAtex"/> + <groups:member groups:idRef="R_FORtex"/> + <groups:member groups:idRef="R_GLCt2"/> + <groups:member groups:idRef="R_NMNtex"/> + <groups:member groups:idRef="R_GLYALDtex"/> + <groups:member groups:idRef="R_ACALDtex"/> + <groups:member groups:idRef="R_MALDt2_2tex"/> + <groups:member groups:idRef="R_GLCtex"/> + <groups:member groups:idRef="R_G3PGtex"/> + <groups:member groups:idRef="R_GLYCLTt4ex"/> + <groups:member groups:idRef="R_ASPt2_2tex"/> + <groups:member groups:idRef="R_PYRt2rtex"/> + <groups:member groups:idRef="R_G3PCtex"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Inorganic_Ion_Transport_and_Metabolism" groups:kind="classification" groups:name="Inorganic_Ion_Transport_and_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_TSULabcpp"/> + <groups:member groups:idRef="R_NH4tex"/> + <groups:member groups:idRef="R_NAt3_1"/> + <groups:member groups:idRef="R_PItex"/> + <groups:member groups:idRef="R_COBALT2tpp"/> + <groups:member groups:idRef="R_NAabcO"/> + <groups:member groups:idRef="R_FE2t2pp"/> + <groups:member groups:idRef="R_MN2t3pp"/> + <groups:member groups:idRef="R_FE3tex"/> + <groups:member groups:idRef="R_SLNTtpp"/> + <groups:member groups:idRef="R_PIuabcpp"/> + <groups:member groups:idRef="R_CLtpp"/> + <groups:member groups:idRef="R_H2O2tex"/> + <groups:member groups:idRef="R_SELGTHR3"/> + <groups:member groups:idRef="R_SELGTHR2"/> + <groups:member groups:idRef="R_CU1Opp"/> + <groups:member groups:idRef="R_CD2tex"/> + <groups:member groups:idRef="R_O2tex"/> + <groups:member groups:idRef="R_MOBDtex"/> + <groups:member groups:idRef="R_CU2tex"/> + <groups:member groups:idRef="R_NI2t3tex"/> + <groups:member groups:idRef="R_St"/> + <groups:member groups:idRef="R_Niabcpp"/> + <groups:member groups:idRef="R_NOtpp"/> + <groups:member groups:idRef="R_MG2tex"/> + <groups:member groups:idRef="R_CU2tpp"/> + <groups:member groups:idRef="R_SELGTHR"/> + <groups:member groups:idRef="R_CO2tpp"/> + <groups:member groups:idRef="R_MOBDabcpp"/> + <groups:member groups:idRef="R_CA2tex"/> + <groups:member groups:idRef="R_COBALT2tex"/> + <groups:member groups:idRef="R_MG2t3_2pp"/> + <groups:member groups:idRef="R_SLNTtex"/> + <groups:member groups:idRef="R_H2tex"/> + <groups:member groups:idRef="R_NITL4"/> + <groups:member groups:idRef="R_H2Otex"/> + <groups:member groups:idRef="R_SO3abcpp"/> + <groups:member groups:idRef="R_NH4tpp"/> + <groups:member groups:idRef="R_H2Stex"/> + <groups:member groups:idRef="R_CD2t3pp"/> + <groups:member groups:idRef="R_CU2_bd_CopA"/> + <groups:member groups:idRef="R_NI2t3pp"/> + <groups:member groups:idRef="R_NO3abcpp"/> + <groups:member groups:idRef="R_H2O2tpp"/> + <groups:member groups:idRef="R_FE3abcpp"/> + <groups:member groups:idRef="R_Kt2tex"/> + <groups:member groups:idRef="R_SULtex"/> + <groups:member groups:idRef="R_COBALT2t3pp"/> + <groups:member groups:idRef="R_NOtex"/> + <groups:member groups:idRef="R_Mntex"/> + <groups:member groups:idRef="R_SULabcpp"/> + <groups:member groups:idRef="R_FEENTERtex"/> + <groups:member groups:idRef="R_FE3Gabcpp"/> + <groups:member groups:idRef="R_HCO3tex"/> + <groups:member groups:idRef="R_SO3tex"/> + <groups:member groups:idRef="R_H2SO"/> + <groups:member groups:idRef="R_NH3c"/> + <groups:member groups:idRef="R_ASR"/> + <groups:member groups:idRef="R_HCO3abcpp"/> + <groups:member groups:idRef="R_TSULtex"/> + <groups:member groups:idRef="R_FE2abcpp"/> + <groups:member groups:idRef="R_CLtex"/> + <groups:member groups:idRef="R_MG2tpp"/> + <groups:member groups:idRef="R_Actex"/> + <groups:member groups:idRef="R_Htex"/> + <groups:member groups:idRef="R_FE2tex"/> + <groups:member groups:idRef="R_O2tpp"/> + <groups:member groups:idRef="R_ZN2t3pp"/> + <groups:member groups:idRef="R_H2Stpp"/> + <groups:member groups:idRef="R_Kt2pp"/> + <groups:member groups:idRef="R_H2Otpp"/> + <groups:member groups:idRef="R_H2tpp"/> + <groups:member groups:idRef="R_CO2tex"/> + <groups:member groups:idRef="R_CA2tpp"/> + <groups:member groups:idRef="R_ZN2tex"/> + <groups:member groups:idRef="R_NO3tex"/> + <groups:member groups:idRef="R_MNabc_1"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Methionine_Metabolism" groups:kind="classification" groups:name="Methionine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PSP_L"/> + <groups:member groups:idRef="R_METOX1s"/> + <groups:member groups:idRef="R_DKMPPD"/> + <groups:member groups:idRef="R_2KMBT"/> + <groups:member groups:idRef="R_METOX2s"/> + <groups:member groups:idRef="R_METSr"/> + <groups:member groups:idRef="R_OXOGAH"/> + <groups:member groups:idRef="R_METAT"/> + <groups:member groups:idRef="R_SHSL1r"/> + <groups:member groups:idRef="R_METSOXR2"/> + <groups:member groups:idRef="R_METSOXR1"/> + <groups:member groups:idRef="R_HSERTA"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Murein_Biosynthesis" groups:kind="classification" groups:name="Murein_Biosynthesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_MDDCP5pp"/> + <groups:member groups:idRef="R_MDDCP1pp"/> + <groups:member groups:idRef="R_MDDCP2pp"/> + <groups:member groups:idRef="R_MDDCP3pp"/> + <groups:member groups:idRef="R_MDDCP4pp"/> + <groups:member groups:idRef="R_MCTP1Bpp"/> + <groups:member groups:idRef="R_MPTG"/> + <groups:member groups:idRef="R_MPTG2"/> + <groups:member groups:idRef="R_MCTP1App"/> + <groups:member groups:idRef="R_MCTP2App"/> + <groups:member groups:idRef="R_MLDCP2App"/> + <groups:member groups:idRef="R_MLDCP2Bpp"/> + <groups:member groups:idRef="R_MLDCP1App"/> + <groups:member groups:idRef="R_MLDCP1Bpp"/> + <groups:member groups:idRef="R_UM4PCP"/> + <groups:member groups:idRef="R_MLDCP3App"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Threonine_and_Lysine_Metabolism" groups:kind="classification" groups:name="Threonine_and_Lysine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ATHRDHr"/> + <groups:member groups:idRef="R_HSDy"/> + <groups:member groups:idRef="R_SDPDS"/> + <groups:member groups:idRef="R_THRS"/> + <groups:member groups:idRef="R_DHDPS"/> + <groups:member groups:idRef="R_ASADH"/> + <groups:member groups:idRef="R_SDPTA"/> + <groups:member groups:idRef="R_DHDPRy"/> + <groups:member groups:idRef="R_THRA2r"/> + <groups:member groups:idRef="R_DAPE"/> + <groups:member groups:idRef="R_THDPS"/> + <groups:member groups:idRef="R_ASPK"/> + <groups:member groups:idRef="R_HSK"/> + <groups:member groups:idRef="R_DAPDC"/> + <groups:member groups:idRef="R_THRAr"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Transport__Inner_Membrane" groups:kind="classification" groups:name="Transport__Inner_Membrane"> + <groups:listOfMembers> + <groups:member groups:idRef="R_NMNt7pp"/> + <groups:member groups:idRef="R_OROTt2_2pp"/> + <groups:member groups:idRef="R_PGP140abcpp"/> + <groups:member groups:idRef="R_PG180abcpp"/> + <groups:member groups:idRef="R_GLUt2rpp"/> + <groups:member groups:idRef="R_MANptspp"/> + <groups:member groups:idRef="R_DALAt2pp"/> + <groups:member groups:idRef="R_INOSTt2pp"/> + <groups:member groups:idRef="R_MNt2pp"/> + <groups:member groups:idRef="R_PE141abcpp"/> + <groups:member groups:idRef="R_PGP141abcpp"/> + <groups:member groups:idRef="R_PG120abcpp"/> + <groups:member groups:idRef="R_PA160abcpp"/> + <groups:member groups:idRef="R_AKGt2rpp"/> + <groups:member groups:idRef="R_PA141abcpp"/> + <groups:member groups:idRef="R_INDOLEt2pp"/> + <groups:member groups:idRef="R_UREAtpp"/> + <groups:member groups:idRef="R_ALAALAabcpp"/> + <groups:member groups:idRef="R_ALAt2pp"/> + <groups:member groups:idRef="R_ETOHtrpp"/> + <groups:member groups:idRef="R_GAMptspp"/> + <groups:member groups:idRef="R_GLYC3Pabcpp"/> + <groups:member groups:idRef="R_XYLabcpp"/> + <groups:member groups:idRef="R_ARGabcpp"/> + <groups:member groups:idRef="R_MSO3abcpp"/> + <groups:member groups:idRef="R_PTRCabcpp"/> + <groups:member groups:idRef="R_PGP120abcpp"/> + <groups:member groups:idRef="R_PHEMEabcpp"/> + <groups:member groups:idRef="R_FORtppi"/> + <groups:member groups:idRef="R_3PEPTabcpp"/> + <groups:member groups:idRef="R_GLNabc"/> + <groups:member groups:idRef="R_NACtpp"/> + <groups:member groups:idRef="R_PE161abcpp"/> + <groups:member groups:idRef="R_ORNtpp"/> + <groups:member groups:idRef="R_PA161abcpp"/> + <groups:member groups:idRef="R_GLCptspp"/> + <groups:member groups:idRef="R_ILEabcpp"/> + <groups:member groups:idRef="R_12DGR180tipp"/> + <groups:member groups:idRef="R_GLUabcpp"/> + <groups:member groups:idRef="R_MALDt2_2pp"/> + <groups:member groups:idRef="R_GLYALDtpp"/> + <groups:member groups:idRef="R_PE160abcpp"/> + <groups:member groups:idRef="R_12DGR140tipp"/> + <groups:member groups:idRef="R_CHTBSptspp"/> + <groups:member groups:idRef="R_GLYC3Pabc"/> + <groups:member groups:idRef="R_CITt3pp"/> + <groups:member groups:idRef="R_PGP180abcpp"/> + <groups:member groups:idRef="R_PG140abcpp"/> + <groups:member groups:idRef="R_PTRCt2pp"/> + <groups:member groups:idRef="R_PA180abcpp"/> + <groups:member groups:idRef="R_PGP161abcpp"/> + <groups:member groups:idRef="R_ICITt_kt"/> + <groups:member groups:idRef="R_PG181abcpp"/> + <groups:member groups:idRef="R_GLYCtpp"/> + <groups:member groups:idRef="R_HYXNtpp"/> + <groups:member groups:idRef="R_FUMt2_2pp"/> + <groups:member groups:idRef="R_Bztpp"/> + <groups:member groups:idRef="R_METabcpp"/> + <groups:member groups:idRef="R_LYSabcpp"/> + <groups:member groups:idRef="R_SERabcpp"/> + <groups:member groups:idRef="R_METSOX2abcpp"/> + <groups:member groups:idRef="R_CHTNABCt"/> + <groups:member groups:idRef="R_ADEt2rpp"/> + <groups:member groups:idRef="R_PROt2rpp"/> + <groups:member groups:idRef="R_PA120abcpp"/> + <groups:member groups:idRef="R_PA181abcpp"/> + <groups:member groups:idRef="R_QUIN2tpp"/> + <groups:member groups:idRef="R_GLUt4pp"/> + <groups:member groups:idRef="R_GUAtpp"/> + <groups:member groups:idRef="R_PG141abcpp"/> + <groups:member groups:idRef="R_TDSR2"/> + <groups:member groups:idRef="R_ACt4pp"/> + <groups:member groups:idRef="R_TDSR1"/> + <groups:member groups:idRef="R_THRabcpp"/> + <groups:member groups:idRef="R_GLYC2Pabcpp"/> + <groups:member groups:idRef="R_12DGR161tipp"/> + <groups:member groups:idRef="R_MEOHtrpp"/> + <groups:member groups:idRef="R_PE180abcpp"/> + <groups:member groups:idRef="R_ASPt2_3pp"/> + <groups:member groups:idRef="R_SUCCt3pp"/> + <groups:member groups:idRef="R_METSOX1abcpp"/> + <groups:member groups:idRef="R_G3PEabcpp"/> + <groups:member groups:idRef="R_PROabcpp"/> + <groups:member groups:idRef="R_ACMUMptspp"/> + <groups:member groups:idRef="R_14GLUCANabcpp"/> + <groups:member groups:idRef="R_DAPabcpp"/> + <groups:member groups:idRef="R_BTNt2ipp"/> + <groups:member groups:idRef="R_ADNt2pp"/> + <groups:member groups:idRef="R_CYSDabcpp"/> + <groups:member groups:idRef="R_G3PGabcpp"/> + <groups:member groups:idRef="R_PROT_cp_LesA"/> + <groups:member groups:idRef="R_4PEPTabcpp"/> + <groups:member groups:idRef="R_PGP181abcpp"/> + <groups:member groups:idRef="R_12DGR120tipp"/> + <groups:member groups:idRef="R_THYMt3pp"/> + <groups:member groups:idRef="R_G3PSabcpp"/> + <groups:member groups:idRef="R_URAt2pp"/> + <groups:member groups:idRef="R_CYSabcpp"/> + <groups:member groups:idRef="R_FRUptspp"/> + <groups:member groups:idRef="R_PE120abcpp"/> + <groups:member groups:idRef="R_GLYCLTt4pp"/> + <groups:member groups:idRef="R_12DGR181tipp"/> + <groups:member groups:idRef="R_PYRt2rpp"/> + <groups:member groups:idRef="R_GLYt2pp"/> + <groups:member groups:idRef="R_LPSabctpp"/> + <groups:member groups:idRef="R_PG161abcpp"/> + <groups:member groups:idRef="R_METDabcpp"/> + <groups:member groups:idRef="R_PG160abcpp"/> + <groups:member groups:idRef="R_LEUabcpp"/> + <groups:member groups:idRef="R_OAAt2_2pp"/> + <groups:member groups:idRef="R_PGP160abcpp"/> + <groups:member groups:idRef="R_ASPt2_2pp"/> + <groups:member groups:idRef="R_ACALDtpp"/> + <groups:member groups:idRef="R_SPMDabcpp"/> + <groups:member groups:idRef="R_ABUTt2pp"/> + <groups:member groups:idRef="R_PE140abcpp"/> + <groups:member groups:idRef="R_FEENTERtpp"/> + <groups:member groups:idRef="R_ACt2rpp"/> + <groups:member groups:idRef="R_12DGR141tipp"/> + <groups:member groups:idRef="R_3HPPtpp"/> + <groups:member groups:idRef="R_G3PIabcpp"/> + <groups:member groups:idRef="R_G3PCabcpp"/> + <groups:member groups:idRef="R_RIBabcpp"/> + <groups:member groups:idRef="R_HISabcpp"/> + <groups:member groups:idRef="R_VALabcpp"/> + <groups:member groups:idRef="R_PA140abcpp"/> + <groups:member groups:idRef="R_TREptspp"/> + <groups:member groups:idRef="R_PE181abcpp"/> + <groups:member groups:idRef="R_12DGR160tipp"/> + <groups:member groups:idRef="R_FUCtpp"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Membrane_Lipid_Metabolism" groups:kind="classification" groups:name="Membrane_Lipid_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_KAS14"/> + <groups:member groups:idRef="R_MCOATA"/> + <groups:member groups:idRef="R_ACCOACr"/> + <groups:member groups:idRef="R_ACOATA"/> + <groups:member groups:idRef="R_KAS15"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cofactor_and_Prosthetic_Group_Biosynthesis" groups:kind="classification" groups:name="Cofactor_and_Prosthetic_Group_Biosynthesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_OPMEACPR"/> + <groups:member groups:idRef="R_OPMEACPS"/> + <groups:member groups:idRef="R_RZ5PP"/> + <groups:member groups:idRef="R_SCYSDS"/> + <groups:member groups:idRef="R_AOXSr2"/> + <groups:member groups:idRef="R_NADK"/> + <groups:member groups:idRef="R_ALATA_D2"/> + <groups:member groups:idRef="R_TMPKr"/> + <groups:member groups:idRef="R_OPHBDC"/> + <groups:member groups:idRef="R_NNDPR"/> + <groups:member groups:idRef="R_CPPPGO"/> + <groups:member groups:idRef="R_ALATA_L2"/> + <groups:member groups:idRef="R_GLUCYS"/> + <groups:member groups:idRef="R_DHNCOAT"/> + <groups:member groups:idRef="R_CDPMEK"/> + <groups:member groups:idRef="R_AKP1"/> + <groups:member groups:idRef="R_ThDPAT"/> + <groups:member groups:idRef="R_FADRx2"/> + <groups:member groups:idRef="R_UBQBM"/> + <groups:member groups:idRef="R_ICYSDS"/> + <groups:member groups:idRef="R_EPMEACPR"/> + <groups:member groups:idRef="R_DXPS"/> + <groups:member groups:idRef="R_PMEACPE"/> + <groups:member groups:idRef="R_GRTT"/> + <groups:member groups:idRef="R_S4FE4SR"/> + <groups:member groups:idRef="R_OPMEACPD"/> + <groups:member groups:idRef="R_FMNRx2"/> + <groups:member groups:idRef="R_QULNS"/> + <groups:member groups:idRef="R_MPTSS"/> + <groups:member groups:idRef="R_S4FE4ST"/> + <groups:member groups:idRef="R_APRAUR"/> + <groups:member groups:idRef="R_2THZPSN2"/> + <groups:member groups:idRef="R_DMPPS"/> + <groups:member groups:idRef="R_NAMNPP"/> + <groups:member groups:idRef="R_GDPTPDP"/> + <groups:member groups:idRef="R_THFAT"/> + <groups:member groups:idRef="R_S2FE2ST"/> + <groups:member groups:idRef="R_GDPDPK"/> + <groups:member groups:idRef="R_LIPOS"/> + <groups:member groups:idRef="R_S2FE2SS"/> + <groups:member groups:idRef="R_S2FE2SR"/> + <groups:member groups:idRef="R_MECDPDH5"/> + <groups:member groups:idRef="R_2MAHMP"/> + <groups:member groups:idRef="R_LIPOCT"/> + <groups:member groups:idRef="R_SHCHF"/> + <groups:member groups:idRef="R_G1SAT"/> + <groups:member groups:idRef="R_NADDP"/> + <groups:member groups:idRef="R_UDCPDPS"/> + <groups:member groups:idRef="R_DHFR"/> + <groups:member groups:idRef="R_PYAM5POr"/> + <groups:member groups:idRef="R_NMNATr"/> + <groups:member groups:idRef="R_DHFS"/> + <groups:member groups:idRef="R_UPP3MT"/> + <groups:member groups:idRef="R_CCGS"/> + <groups:member groups:idRef="R_PPBNGS"/> + <groups:member groups:idRef="R_GTHRDHpp"/> + <groups:member groups:idRef="R_PPPGO"/> + <groups:member groups:idRef="R_DHPPDA2"/> + <groups:member groups:idRef="R_AMPMS2"/> + <groups:member groups:idRef="R_FLDR2"/> + <groups:member groups:idRef="R_EGMEACPR"/> + <groups:member groups:idRef="R_DHNPTE"/> + <groups:member groups:idRef="R_MALCOAMT"/> + <groups:member groups:idRef="R_DXPRIi"/> + <groups:member groups:idRef="R_DHGLYH"/> + <groups:member groups:idRef="R_DB4PS"/> + <groups:member groups:idRef="R_FMNAT"/> + <groups:member groups:idRef="R_DPR"/> + <groups:member groups:idRef="R_UPP3S"/> + <groups:member groups:idRef="R_FLVR"/> + <groups:member groups:idRef="R_NADS2"/> + <groups:member groups:idRef="R_DNTPPA"/> + <groups:member groups:idRef="R_SEAHCYSHYD"/> + <groups:member groups:idRef="R_RBFK"/> + <groups:member groups:idRef="R_AHSERL3"/> + <groups:member groups:idRef="R_PNTK"/> + <groups:member groups:idRef="R_DPCOAK"/> + <groups:member groups:idRef="R_PHEMEAS"/> + <groups:member groups:idRef="R_NNAMr"/> + <groups:member groups:idRef="R_GTPDPK"/> + <groups:member groups:idRef="R_HPPK2"/> + <groups:member groups:idRef="R_TMPPP"/> + <groups:member groups:idRef="R_IPDPS"/> + <groups:member groups:idRef="R_DMATT"/> + <groups:member groups:idRef="R_GTPCI"/> + <groups:member groups:idRef="R_PPGPPDP"/> + <groups:member groups:idRef="R_FCLT"/> + <groups:member groups:idRef="R_THZPSN3"/> + <groups:member groups:idRef="R_CPH4S"/> + <groups:member groups:idRef="R_CDGS"/> + <groups:member groups:idRef="R_CDGR"/> + <groups:member groups:idRef="R_2THZPSN"/> + <groups:member groups:idRef="R_RBFSb"/> + <groups:member groups:idRef="R_BTS5"/> + <groups:member groups:idRef="R_MECDPS"/> + <groups:member groups:idRef="R_HMBS"/> + <groups:member groups:idRef="R_RBFSa"/> + <groups:member groups:idRef="R_CHRPL"/> + <groups:member groups:idRef="R_OMPHHX"/> + <groups:member groups:idRef="R_HMPK1"/> + <groups:member groups:idRef="R_NMNDA"/> + <groups:member groups:idRef="R_GTPCII2"/> + <groups:member groups:idRef="R_PTPAT"/> + <groups:member groups:idRef="R_HBZOPT"/> + <groups:member groups:idRef="R_GRXR"/> + <groups:member groups:idRef="R_4HTHRS"/> + <groups:member groups:idRef="R_SHCHD2"/> + <groups:member groups:idRef="R_PPCDC"/> + <groups:member groups:idRef="R_NMNN"/> + <groups:member groups:idRef="R_OGMEACPD"/> + <groups:member groups:idRef="R_THBPTD"/> + <groups:member groups:idRef="R_UPPDC1"/> + <groups:member groups:idRef="R_MEPCT"/> + <groups:member groups:idRef="R_PMPK"/> + <groups:member groups:idRef="R_GTHS"/> + <groups:member groups:idRef="R_DBTSr"/> + <groups:member groups:idRef="R_DHNPA2"/> + <groups:member groups:idRef="R_AMAOTr"/> + <groups:member groups:idRef="R_PMDPHT"/> + <groups:member groups:idRef="R_OMMBLHX"/> + <groups:member groups:idRef="R_S2FE2SS2"/> + <groups:member groups:idRef="R_E4PD"/> + <groups:member groups:idRef="R_PDX5PS"/> + <groups:member groups:idRef="R_HEMEOS"/> + <groups:member groups:idRef="R_ALKP"/> + <groups:member groups:idRef="R_TDP"/> + <groups:member groups:idRef="R_MOHMT"/> + <groups:member groups:idRef="R_CPPPGO2"/> + <groups:member groups:idRef="R_DMQMT"/> + <groups:member groups:idRef="R_ADCL"/> + <groups:member groups:idRef="R_ASPO5"/> + <groups:member groups:idRef="R_DNMPPA"/> + <groups:member groups:idRef="R_OCTDPS"/> + <groups:member groups:idRef="R_ASPO3"/> + <groups:member groups:idRef="R_DHPS2"/> + <groups:member groups:idRef="R_PDX5PO"/> + <groups:member groups:idRef="R_ADCS"/> + <groups:member groups:idRef="R_ASP1DC"/> + <groups:member groups:idRef="R_ASPO6"/> + <groups:member groups:idRef="R_PANTS"/> + <groups:member groups:idRef="R_OGMEACPS"/> + <groups:member groups:idRef="R_OPHHX"/> + <groups:member groups:idRef="R_OHPBAT"/> + <groups:member groups:idRef="R_OGMEACPR"/> + <groups:member groups:idRef="R_PPNCL2"/> + <groups:member groups:idRef="R_NADPPPS"/> + <groups:member groups:idRef="R_OHPHM"/> + <groups:member groups:idRef="R_PERD"/> + <groups:member groups:idRef="R_GTHOr"/> + <groups:member groups:idRef="R_OMBZLM"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glycine_and_Serine_Metabolism" groups:kind="classification" groups:name="Glycine_and_Serine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_DSERDHr"/> + <groups:member groups:idRef="R_LSERDHr"/> + <groups:member groups:idRef="R_GHMT2r"/> + <groups:member groups:idRef="R_PGCDr"/> + <groups:member groups:idRef="R_GLYAT"/> + <groups:member groups:idRef="R_PSERTr"/> + <groups:member groups:idRef="R_PSP"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Pentose_Phosphate_Pathway" groups:kind="classification" groups:name="Pentose_Phosphate_Pathway"> + <groups:listOfMembers> + <groups:member groups:idRef="R_RPI"/> + <groups:member groups:idRef="R_SBPA"/> + <groups:member groups:idRef="R_RPE"/> + <groups:member groups:idRef="R_EDD"/> + <groups:member groups:idRef="R_PGL"/> + <groups:member groups:idRef="R_G6PDH2r"/> + <groups:member groups:idRef="R_EDA"/> + <groups:member groups:idRef="R_TKT2"/> + <groups:member groups:idRef="R_TKT1"/> + <groups:member groups:idRef="R_PFK_3"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cyanate_degradation" groups:kind="classification" groups:name="Cyanate_degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_HCO3E"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cystein_Metabolism" groups:kind="classification" groups:name="Cystein_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_AHC"/> + <groups:member groups:idRef="R_CYSSr2"/> + <groups:member groups:idRef="R_CYSTS"/> + <groups:member groups:idRef="R_CYSTGL"/> + <groups:member groups:idRef="R_SLCYSS"/> + <groups:member groups:idRef="R_AHSERL2"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glutamate_Metabolism_" groups:kind="classification" groups:name="Glutamate_Metabolism_"> + <groups:listOfMembers> + <groups:member groups:idRef="R_GLNS"/> + <groups:member groups:idRef="R_GLUSy"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Nitrile_degradation" groups:kind="classification" groups:name="Nitrile_degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_NTRLASE3"/> + <groups:member groups:idRef="R_NTRLASE2"/> + <groups:member groups:idRef="R_NTRLASE"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Nitrogen_Metabolism" groups:kind="classification" groups:name="Nitrogen_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_NODOx"/> + <groups:member groups:idRef="R_ALLTNr"/> + <groups:member groups:idRef="R_NODOy"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glycerophospholipid_Metabolism" groups:kind="classification" groups:name="Glycerophospholipid_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PGPP160"/> + <groups:member groups:idRef="R_PGPP120"/> + <groups:member groups:idRef="R_PGPP161"/> + <groups:member groups:idRef="R_AGPAT160"/> + <groups:member groups:idRef="R_DASYN141"/> + <groups:member groups:idRef="R_AGPAT161"/> + <groups:member groups:idRef="R_AGPAT120"/> + <groups:member groups:idRef="R_DASYN181"/> + <groups:member groups:idRef="R_PGSA180"/> + <groups:member groups:idRef="R_DASYN140"/> + <groups:member groups:idRef="R_DASYN180"/> + <groups:member groups:idRef="R_DAGK120"/> + <groups:member groups:idRef="R_EAR181x"/> + <groups:member groups:idRef="R_G3PAT161"/> + <groups:member groups:idRef="R_PGSA141"/> + <groups:member groups:idRef="R_G3PAT160"/> + <groups:member groups:idRef="R_EAR161x"/> + <groups:member groups:idRef="R_EAR40x"/> + <groups:member groups:idRef="R_EAR141x"/> + <groups:member groups:idRef="R_PGSA181"/> + <groups:member groups:idRef="R_EAR60x"/> + <groups:member groups:idRef="R_G3PAT120"/> + <groups:member groups:idRef="R_PGSA140"/> + <groups:member groups:idRef="R_EAR121x"/> + <groups:member groups:idRef="R_EAR80x"/> + <groups:member groups:idRef="R_DAGK180"/> + <groups:member groups:idRef="R_DAGK181"/> + <groups:member groups:idRef="R_DAGK140"/> + <groups:member groups:idRef="R_CLPNS181pp"/> + <groups:member groups:idRef="R_CLPNS160pp"/> + <groups:member groups:idRef="R_PSSA120"/> + <groups:member groups:idRef="R_CLPNS141pp"/> + <groups:member groups:idRef="R_PGPP140pp"/> + <groups:member groups:idRef="R_PSSA161"/> + <groups:member groups:idRef="R_PSD160"/> + <groups:member groups:idRef="R_PSSA160"/> + <groups:member groups:idRef="R_PGPP161pp"/> + <groups:member groups:idRef="R_PSD161"/> + <groups:member groups:idRef="R_PSD120"/> + <groups:member groups:idRef="R_PGPP180pp"/> + <groups:member groups:idRef="R_PGPP181"/> + <groups:member groups:idRef="R_PGPP180"/> + <groups:member groups:idRef="R_PGPP141"/> + <groups:member groups:idRef="R_AGPAT180"/> + <groups:member groups:idRef="R_AGPAT181"/> + <groups:member groups:idRef="R_PGPP140"/> + <groups:member groups:idRef="R_AGPAT140"/> + <groups:member groups:idRef="R_DASYN120"/> + <groups:member groups:idRef="R_AGPAT141"/> + <groups:member groups:idRef="R_CLPNS120pp"/> + <groups:member groups:idRef="R_DASYN160"/> + <groups:member groups:idRef="R_DASYN161"/> + <groups:member groups:idRef="R_G3PAT140"/> + <groups:member groups:idRef="R_PGSA120"/> + <groups:member groups:idRef="R_DAGK141"/> + <groups:member groups:idRef="R_G3PAT181"/> + <groups:member groups:idRef="R_PGSA160"/> + <groups:member groups:idRef="R_G3PAT141"/> + <groups:member groups:idRef="R_PGSA161"/> + <groups:member groups:idRef="R_G3PAT180"/> + <groups:member groups:idRef="R_DAGK160"/> + <groups:member groups:idRef="R_DAGK161"/> + <groups:member groups:idRef="R_CLPNS180pp"/> + <groups:member groups:idRef="R_CLPNS161pp"/> + <groups:member groups:idRef="R_CLPNS140pp"/> + <groups:member groups:idRef="R_PSSA141"/> + <groups:member groups:idRef="R_PSD180"/> + <groups:member groups:idRef="R_PSSA140"/> + <groups:member groups:idRef="R_PGPP120pp"/> + <groups:member groups:idRef="R_PSD181"/> + <groups:member groups:idRef="R_PSSA181"/> + <groups:member groups:idRef="R_PGPP141pp"/> + <groups:member groups:idRef="R_PSSA180"/> + <groups:member groups:idRef="R_EAR180x"/> + <groups:member groups:idRef="R_EAR160x"/> + <groups:member groups:idRef="R_EAR140x"/> + <groups:member groups:idRef="R_PSD140"/> + <groups:member groups:idRef="R_EAR120x"/> + <groups:member groups:idRef="R_PGPP160pp"/> + <groups:member groups:idRef="R_PGPP181pp"/> + <groups:member groups:idRef="R_EAR100x"/> + <groups:member groups:idRef="R_PSD141"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Biomass_and_maintenance_functions" groups:kind="classification" groups:name="Biomass_and_maintenance_functions"> + <groups:listOfMembers> + <groups:member groups:idRef="R_XF_Biomass"/> + <groups:member groups:idRef="R_ATPM"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Nucleotide_Salvage_Pathway" groups:kind="classification" groups:name="Nucleotide_Salvage_Pathway"> + <groups:listOfMembers> + <groups:member groups:idRef="R_CYTK1"/> + <groups:member groups:idRef="R_DCTPD"/> + <groups:member groups:idRef="R_DHORTS"/> + <groups:member groups:idRef="R_DCTPD2"/> + <groups:member groups:idRef="R_DTMPK"/> + <groups:member groups:idRef="R_CYTK2"/> + <groups:member groups:idRef="R_RNDR3b"/> + <groups:member groups:idRef="R_NTPP11"/> + <groups:member groups:idRef="R_NTPP10"/> + <groups:member groups:idRef="R_DGK1"/> + <groups:member groups:idRef="R_GUAPRT"/> + <groups:member groups:idRef="R_ATPHs"/> + <groups:member groups:idRef="R_RNDR2b"/> + <groups:member groups:idRef="R_HXPRT"/> + <groups:member groups:idRef="R_UMPK"/> + <groups:member groups:idRef="R_ADK1"/> + <groups:member groups:idRef="R_NDPK4"/> + <groups:member groups:idRef="R_NDPK5"/> + <groups:member groups:idRef="R_NTPP2"/> + <groups:member groups:idRef="R_NDPK2"/> + <groups:member groups:idRef="R_NTPP1"/> + <groups:member groups:idRef="R_NDPK3"/> + <groups:member groups:idRef="R_NTP5"/> + <groups:member groups:idRef="R_NDPK1"/> + <groups:member groups:idRef="R_GP4GH"/> + <groups:member groups:idRef="R_NTP1"/> + <groups:member groups:idRef="R_NTP3"/> + <groups:member groups:idRef="R_NDPK8"/> + <groups:member groups:idRef="R_AP4AS"/> + <groups:member groups:idRef="R_ADK3"/> + <groups:member groups:idRef="R_NDPK6"/> + <groups:member groups:idRef="R_ADK4"/> + <groups:member groups:idRef="R_NDPK7"/> + <groups:member groups:idRef="R_RNDR1b"/> + <groups:member groups:idRef="R_NTD9"/> + <groups:member groups:idRef="R_PYNP2r"/> + <groups:member groups:idRef="R_NTPP8"/> + <groups:member groups:idRef="R_NTD5"/> + <groups:member groups:idRef="R_AP4AHr"/> + <groups:member groups:idRef="R_DUTPDP"/> + <groups:member groups:idRef="R_NTPP7"/> + <groups:member groups:idRef="R_NTD6"/> + <groups:member groups:idRef="R_NTD7"/> + <groups:member groups:idRef="R_NTPP9"/> + <groups:member groups:idRef="R_NTD8"/> + <groups:member groups:idRef="R_NTPP4"/> + <groups:member groups:idRef="R_NTD1"/> + <groups:member groups:idRef="R_NTPP3"/> + <groups:member groups:idRef="R_NTD2"/> + <groups:member groups:idRef="R_NTPP6"/> + <groups:member groups:idRef="R_NTD3"/> + <groups:member groups:idRef="R_NTPP5"/> + <groups:member groups:idRef="R_NTD4"/> + <groups:member groups:idRef="R_GK1"/> + <groups:member groups:idRef="R_DADK"/> + <groups:member groups:idRef="R_TMDS"/> + <groups:member groups:idRef="R_ADPRDP"/> + <groups:member groups:idRef="R_DATPHs"/> + <groups:member groups:idRef="R_MSAR"/> + <groups:member groups:idRef="R_ADNK1"/> + <groups:member groups:idRef="R_RNDR4b"/> + <groups:member groups:idRef="R_NTP10"/> + <groups:member groups:idRef="R_CMPN"/> + <groups:member groups:idRef="R_AP5AH"/> + <groups:member groups:idRef="R_NNATr"/> + <groups:member groups:idRef="R_RNDR2"/> + <groups:member groups:idRef="R_RNDR1"/> + <groups:member groups:idRef="R_NTD11"/> + <groups:member groups:idRef="R_NTD10"/> + <groups:member groups:idRef="R_RNDR4"/> + <groups:member groups:idRef="R_RNDR3"/> + <groups:member groups:idRef="R_NTD12"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cell_Envelope_Biosynthesis" groups:kind="classification" groups:name="Cell_Envelope_Biosynthesis"> + <groups:listOfMembers> + <groups:member groups:idRef="R_UAAGDS"/> + <groups:member groups:idRef="R_3HAD121"/> + <groups:member groups:idRef="R_3HAD120"/> + <groups:member groups:idRef="R_GMAND"/> + <groups:member groups:idRef="R_AACPS9"/> + <groups:member groups:idRef="R_EPSsynthXF"/> + <groups:member groups:idRef="R_PMANM"/> + <groups:member groups:idRef="R_3OAR160"/> + <groups:member groups:idRef="R_3OAR161"/> + <groups:member groups:idRef="R_K2L4Aabctex"/> + <groups:member groups:idRef="R_FACOAL141t2pp"/> + <groups:member groups:idRef="R_ALAALAr"/> + <groups:member groups:idRef="R_UGMDDS"/> + <groups:member groups:idRef="R_UDPGDC"/> + <groups:member groups:idRef="R_UDCPDP"/> + <groups:member groups:idRef="R_AACPS8"/> + <groups:member groups:idRef="R_AACPS7"/> + <groups:member groups:idRef="R_AACPS6"/> + <groups:member groups:idRef="R_3HAD60"/> + <groups:member groups:idRef="R_AACPS5"/> + <groups:member groups:idRef="R_AACPS4"/> + <groups:member groups:idRef="R_AACPS3"/> + <groups:member groups:idRef="R_3OAS120"/> + <groups:member groups:idRef="R_AACPS2"/> + <groups:member groups:idRef="R_3OAS121"/> + <groups:member groups:idRef="R_AACPS1"/> + <groups:member groups:idRef="R_F2NAPPUDC"/> + <groups:member groups:idRef="R_FACOAE140"/> + <groups:member groups:idRef="R_FACOAE141"/> + <groups:member groups:idRef="R_FACOAL80t2pp"/> + <groups:member groups:idRef="R_G1PTT"/> + <groups:member groups:idRef="R_LIPAabctex"/> + <groups:member groups:idRef="R_LPADSSXF"/> + <groups:member groups:idRef="R_3HAD100"/> + <groups:member groups:idRef="R_GLUR"/> + <groups:member groups:idRef="R_PGAMT"/> + <groups:member groups:idRef="R_EDTXS3XF"/> + <groups:member groups:idRef="R_COLIPAabcpp"/> + <groups:member groups:idRef="R_FACOAL161t2pp"/> + <groups:member groups:idRef="R_3HAD181"/> + <groups:member groups:idRef="R_3HAD180"/> + <groups:member groups:idRef="R_3OAR140"/> + <groups:member groups:idRef="R_3OAR141"/> + <groups:member groups:idRef="R_FACOAL180t2pp"/> + <groups:member groups:idRef="R_EPStexXF"/> + <groups:member groups:idRef="R_USHDXF"/> + <groups:member groups:idRef="R_LPSS2XF"/> + <groups:member groups:idRef="R_ACMAMUT"/> + <groups:member groups:idRef="R_3OAS180"/> + <groups:member groups:idRef="R_3OAS181"/> + <groups:member groups:idRef="R_MAN6PI"/> + <groups:member groups:idRef="R_EPStppXF"/> + <groups:member groups:idRef="R_UAGPT3"/> + <groups:member groups:idRef="R_KDOPS"/> + <groups:member groups:idRef="R_3HAD80"/> + <groups:member groups:idRef="R_TDPGDH"/> + <groups:member groups:idRef="R_3OAS100"/> + <groups:member groups:idRef="R_KDOPP"/> + <groups:member groups:idRef="R_UDP4KPS"/> + <groups:member groups:idRef="R_3OAR40"/> + <groups:member groups:idRef="R_MOAT2XF"/> + <groups:member groups:idRef="R_3OAS60"/> + <groups:member groups:idRef="R_FACOAE160"/> + <groups:member groups:idRef="R_UAGDP"/> + <groups:member groups:idRef="R_FACOAE161"/> + <groups:member groups:idRef="R_MAN1PT2r"/> + <groups:member groups:idRef="R_FACOAL140t2pp"/> + <groups:member groups:idRef="R_U23GAATXF"/> + <groups:member groups:idRef="R_3HAD161"/> + <groups:member groups:idRef="R_TDSKXF"/> + <groups:member groups:idRef="R_3HAD160"/> + <groups:member groups:idRef="R_PAPPT3"/> + <groups:member groups:idRef="R_HEPT1"/> + <groups:member groups:idRef="R_MI1PP"/> + <groups:member groups:idRef="R_3OAR120"/> + <groups:member groups:idRef="R_COLIPAabctex"/> + <groups:member groups:idRef="R_HEPT3"/> + <groups:member groups:idRef="R_UDCPDPtppi"/> + <groups:member groups:idRef="R_3OAR121"/> + <groups:member groups:idRef="R_LPSS1XF"/> + <groups:member groups:idRef="R_UAMAS"/> + <groups:member groups:idRef="R_FACOAL181t2pp"/> + <groups:member groups:idRef="R_UAPGR"/> + <groups:member groups:idRef="R_UDCPDPpp"/> + <groups:member groups:idRef="R_O16A4COLIPAabctex"/> + <groups:member groups:idRef="R_UACMAMO"/> + <groups:member groups:idRef="R_LIPAabcpp"/> + <groups:member groups:idRef="R_FACOAE60"/> + <groups:member groups:idRef="R_FACOAL120t2pp"/> + <groups:member groups:idRef="R_FACOAE100"/> + <groups:member groups:idRef="R_3OAS160"/> + <groups:member groups:idRef="R_3OAS161"/> + <groups:member groups:idRef="R_UDPGLCUR4EP"/> + <groups:member groups:idRef="R_FACOAE180"/> + <groups:member groups:idRef="R_3OAR60"/> + <groups:member groups:idRef="R_FACOAE181"/> + <groups:member groups:idRef="R_PROT_LesA_BioS"/> + <groups:member groups:idRef="R_FACOAL60t2pp"/> + <groups:member groups:idRef="R_3OAS80"/> + <groups:member groups:idRef="R_3HAD141"/> + <groups:member groups:idRef="R_3HAD140"/> + <groups:member groups:idRef="R_EDTXS1XF"/> + <groups:member groups:idRef="R_T2DECAI"/> + <groups:member groups:idRef="R_ULA4NFT"/> + <groups:member groups:idRef="R_3HAD40"/> + <groups:member groups:idRef="R_UAMAGS"/> + <groups:member groups:idRef="R_3OAR180"/> + <groups:member groups:idRef="R_3OAR181"/> + <groups:member groups:idRef="R_3OAR100"/> + <groups:member groups:idRef="R_UAGCVT"/> + <groups:member groups:idRef="R_FACOAL100t2pp"/> + <groups:member groups:idRef="R_PGMT"/> + <groups:member groups:idRef="R_G1PACT"/> + <groups:member groups:idRef="R_UAGAATXF"/> + <groups:member groups:idRef="R_UHGADAXF"/> + <groups:member groups:idRef="R_TDPDRE"/> + <groups:member groups:idRef="R_FACOAE80"/> + <groups:member groups:idRef="R_3OAS140"/> + <groups:member groups:idRef="R_3OAS141"/> + <groups:member groups:idRef="R_KDOCT2"/> + <groups:member groups:idRef="R_GF6PTAr"/> + <groups:member groups:idRef="R_FACOAL160t2pp"/> + <groups:member groups:idRef="R_GALU"/> + <groups:member groups:idRef="R_TDPDRR"/> + <groups:member groups:idRef="R_UDPXYLS"/> + <groups:member groups:idRef="R_ACGAMT"/> + <groups:member groups:idRef="R_3OAR80"/> + <groups:member groups:idRef="R_MOATXF"/> + <groups:member groups:idRef="R_UDPGDr"/> + <groups:member groups:idRef="R_FACOAE120"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Tyrosine__Tryptophan__and_Phenylalanine_Metabolism" groups:kind="classification" groups:name="Tyrosine__Tryptophan__and_Phenylalanine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_QUINDH"/> + <groups:member groups:idRef="R_IGPS"/> + <groups:member groups:idRef="R_TRPS2"/> + <groups:member groups:idRef="R_TYRTA"/> + <groups:member groups:idRef="R_DHQD"/> + <groups:member groups:idRef="R_ANPRT"/> + <groups:member groups:idRef="R_SHKK"/> + <groups:member groups:idRef="R_PPNDH"/> + <groups:member groups:idRef="R_PPND"/> + <groups:member groups:idRef="R_PHETA1"/> + <groups:member groups:idRef="R_CHORS"/> + <groups:member groups:idRef="R_SHK3Dr"/> + <groups:member groups:idRef="R_CHORM"/> + <groups:member groups:idRef="R_ANS"/> + <groups:member groups:idRef="R_DDPA"/> + <groups:member groups:idRef="R_PSCVT"/> + <groups:member groups:idRef="R_DHQS"/> + <groups:member groups:idRef="R_TRPS3r"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Valine__Leucine__and_Isoleucine_Metabolism" groups:kind="classification" groups:name="Valine__Leucine__and_Isoleucine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ILETA"/> + <groups:member groups:idRef="R_IPMDr"/> + <groups:member groups:idRef="R_KARA1"/> + <groups:member groups:idRef="R_THRD_L"/> + <groups:member groups:idRef="R_ACHBS"/> + <groups:member groups:idRef="R_IPPMIb"/> + <groups:member groups:idRef="R_DHAD2"/> + <groups:member groups:idRef="R_IPPMIa"/> + <groups:member groups:idRef="R_DHAD1"/> + <groups:member groups:idRef="R_MOPG"/> + <groups:member groups:idRef="R_ACLS"/> + <groups:member groups:idRef="R_VALTA"/> + <groups:member groups:idRef="R_LEUTA"/> + <groups:member groups:idRef="R_KARA2"/> + <groups:member groups:idRef="R_IPPS"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cysteine_Metabolism" groups:kind="classification" groups:name="Cysteine_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_PAPSR"/> + <groups:member groups:idRef="R_SULRi"/> + <groups:member groups:idRef="R_BPNT"/> + <groups:member groups:idRef="R_CYSSADS"/> + <groups:member groups:idRef="R_AMPTASECG"/> + <groups:member groups:idRef="R_SERAT"/> + <groups:member groups:idRef="R_SADT2"/> + <groups:member groups:idRef="R_PAPSR2"/> + <groups:member groups:idRef="R_ADSK"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Alanine_and_Aspartate_Metabolism" groups:kind="classification" groups:name="Alanine_and_Aspartate_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_DAAD"/> + <groups:member groups:idRef="R_ASPT"/> + <groups:member groups:idRef="R_ASPTA"/> + <groups:member groups:idRef="R_ALATA_L"/> + <groups:member groups:idRef="R_ASNN"/> + <groups:member groups:idRef="R_ASNS1"/> + <groups:member groups:idRef="R_ALAR"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Methylglyoxal_degradation" groups:kind="classification" groups:name="Methylglyoxal_degradation"> + <groups:listOfMembers> + <groups:member groups:idRef="R_GLYOX"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Glutamate_Metabolism" groups:kind="classification" groups:name="Glutamate_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_ORNTA"/> + <groups:member groups:idRef="R_ACCITRH"/> + <groups:member groups:idRef="R_GLUN"/> + <groups:member groups:idRef="R_ACOCMT"/> + <groups:member groups:idRef="R_P5CG"/> + <groups:member groups:idRef="R_GLUDxi"/> + <groups:member groups:idRef="R_CMPA_1"/> + <groups:member groups:idRef="R_ACGS"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Folate_Metabolism" groups:kind="classification" groups:name="Folate_Metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_MTHFR2"/> + <groups:member groups:idRef="R_FTHFD"/> + <groups:member groups:idRef="R_GLYCL"/> + <groups:member groups:idRef="R_FOMETR"/> + <groups:member groups:idRef="R_MTHFD"/> + <groups:member groups:idRef="R_MTHFC"/> + </groups:listOfMembers> + </groups:group> + <groups:group groups:id="Cysteine_and_methionine_metabolism" groups:kind="classification" groups:name="Cysteine_and_methionine_metabolism"> + <groups:listOfMembers> + <groups:member groups:idRef="R_MTRI"/> + <groups:member groups:idRef="R_ARD"/> + <groups:member groups:idRef="R_MDRPDr"/> + <groups:member groups:idRef="R_ARD2"/> + <groups:member groups:idRef="R_ENOPH"/> + <groups:member groups:idRef="R_MTAP"/> + </groups:listOfMembers> + </groups:group> + </groups:listOfGroups> + <listOfUnitDefinitions> + <unitDefinition id="mmol_per_gDW_per_hr" name="mmol_per_gDW_per_hr"> + <listOfUnits> + <unit exponent="-1" kind="gram" multiplier="1" scale="0"/> + <unit exponent="1" kind="mole" multiplier="1" scale="-3"/> + <unit exponent="-1" kind="second" multiplier="0.00027777" scale="0"/> + </listOfUnits> + </unitDefinition> + </listOfUnitDefinitions> + <listOfCompartments> + <compartment constant="false" id="p" metaid="_43be7dad-5b92-450e-be6a-a69cbf6b295d" name="p" spatialDimensions="3"/> + <compartment constant="false" id="c" metaid="_37f973ef-d0be-4203-9777-e037f1222d90" name="c" spatialDimensions="3"/> + <compartment constant="false" id="e" metaid="b4d9b2bb-d72a-4183-9081-ce1b23ce885c" name="e" spatialDimensions="3"/> + </listOfCompartments> + <listOfSpecies> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H29O2" hasOnlySubstanceUnits="true" id="M_hdcea_c" metaid="_83a30aa3-d844-48f9-a634-0d61506245d3" name="M_hdcea_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H29O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H29O2" hasOnlySubstanceUnits="true" id="M_hdcea_e" metaid="_5b81de6a-46d4-4aa1-b51a-a61989930aa1" name="Hexadecenoate__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H29O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H29N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ohexACP_c" metaid="_09cc2866-3763-4a58-b634-1e9391011c2c" name="3_Oxohexanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H29N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO6" hasOnlySubstanceUnits="true" id="M_sucgsa_c" metaid="_95bdb449-54c9-4128-a9b7-5d7bee0b8728" name="M_sucgsa_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11NO6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H21N5O15P2" hasOnlySubstanceUnits="true" id="M_gdpddman_c" metaid="_5621cf38-5dfc-4cf2-b7e3-283d7235c86b" name="GDP_4_dehydro_6_deoxy_D_mannose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H21N5O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H13N2O2" hasOnlySubstanceUnits="true" id="M_orn_p" metaid="c3c6cd96-69bb-4134-bd0d-223a4a770348" name="Ornithine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H13N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO4" hasOnlySubstanceUnits="true" id="M_glu_D_c" metaid="_71a68abb-5db5-4c53-91d2-24a2e4beab94" name="D_Glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="MoO4" hasOnlySubstanceUnits="true" id="M_mobd_e" metaid="_42cec621-b997-409f-ae61-2b06e193e88c" name="Molybdate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: MoO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O8P" hasOnlySubstanceUnits="true" id="M_g3pg_c" metaid="_4195cc12-3ead-499a-babc-f43402625ce1" name="Glycerophosphoglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H14O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_h2o_p" metaid="_1d2341b1-a141-4a22-bd62-fa338f7f2346" name="H2O" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O8P" hasOnlySubstanceUnits="true" id="M_g3pg_e" metaid="_2afa5d9d-9d23-45cd-a848-5b2daa9ce630" name="Glycerophosphoglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H14O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaasp_c" metaid="_81402407-ed90-4c32-b133-7c1b5a2e1a6e" name="tRNA_Asp_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Ni" hasOnlySubstanceUnits="true" id="M_ni2_p" metaid="c63ab7cd-3059-44f4-ae8f-9b967625ebca" name="nickel" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ni</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H74N1O8P1" hasOnlySubstanceUnits="true" id="M_pe160_c" metaid="_59c509d6-1751-4e87-b01c-14cf34ac9b4c" name="phosphatidylethanolamine__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H74N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H31N2O8PRS" hasOnlySubstanceUnits="true" id="M_hexACP_c" metaid="d3d3b718-243e-4d20-b658-13f3bb77c444" name="Hexanoyl_ACP__n_C6_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H31N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="MoO4" hasOnlySubstanceUnits="true" id="M_mobd_c" metaid="cf476b69-9c74-45db-bf2b-145a2fd50ba3" name="Molybdate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: MoO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C77H117N15O40" hasOnlySubstanceUnits="true" id="M_murein5px4p_p" metaid="c53ad754-9f5c-4984-af4c-6b2b5e446284" name="two_disacharide_linked_murein_units__pentapeptide_crosslinked_tetrapeptide__A2pm__D_ala___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C77H117N15O40</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H10O3" hasOnlySubstanceUnits="true" id="M_dmoxpol_c" metaid="beb0eb5d-519f-4b06-8171-7dc4a7d1af7b" name="Dimethoxyphenol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H10O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H74N1O8P1" hasOnlySubstanceUnits="true" id="M_pe160_p" metaid="a44dcca2-66e7-44ae-9186-978f6b1542ba" name="phosphatidylethanolamine__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H74N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Ni" hasOnlySubstanceUnits="true" id="M_ni2_e" metaid="_6949f66e-e627-4fdb-9009-56246e4dc4b0" name="nickel" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ni</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Ni" hasOnlySubstanceUnits="true" id="M_ni2_c" metaid="_40131acb-4ecf-4acd-af9c-91224f8e4960" name="nickel" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ni</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9O6" hasOnlySubstanceUnits="true" id="M_3dhq_c" metaid="_89b598af-c5d9-4d78-a32f-886d14936013" name="3_Dehydroquinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H9O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11N3O4P" hasOnlySubstanceUnits="true" id="M_hisp_c" metaid="_406b497f-432f-4b2b-a34a-075cb4a46571" name="L_Histidinol_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11N3O4P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O4" hasOnlySubstanceUnits="true" id="M_23dhmb_c" metaid="_07921bfa-da8f-4679-84dc-9765988d4938" name="R__2_3_Dihydroxy_3_methylbutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N4O9P" hasOnlySubstanceUnits="true" id="M_fprica_c" metaid="_72798c59-4852-475e-a2d5-2e972bc9ac1c" name="5_Formamido_1__5_phospho_D_ribosyl_imidazole_4_carboxamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15O2" hasOnlySubstanceUnits="true" id="M_octa_p" metaid="_30c3518e-a938-43f3-9051-a3e711f90b51" name="octanoate__n_C8_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H65N1O10P1" hasOnlySubstanceUnits="true" id="M_ps140_c" metaid="_3aa73b52-633a-48e2-b679-62294e71a142" name="phosphatidylserine__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H65N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_man6p_c" metaid="_6a1d6c5a-1a82-48c8-b683-6aaa8bc960f0" name="D_Mannose_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H15N4O9P" hasOnlySubstanceUnits="true" id="M_5aprbu_c" metaid="_956bb393-be66-4b4b-a4ba-2d429c8bd248" name="5_Amino_6__5__phosphoribitylamino_uracil" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H15N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="X" hasOnlySubstanceUnits="true" id="M_dsbdox_c" metaid="_284731a5-c739-47cf-8d77-97ce4a14ed4a" name="fused_thiol_disulfide_interchange_protein__oxidized_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O13P3" hasOnlySubstanceUnits="true" id="M_atp_c" metaid="_19cd466b-47a4-41ff-8587-533476481886" name="ATP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O13P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_fuc_L_p" metaid="_61db7a7f-c90a-4ce6-bca1-2f069f020836" name="M_fuc_L_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H15N2O3S" hasOnlySubstanceUnits="true" id="M_btn_e" metaid="_927232ea-6021-48bc-9666-ef542c59560c" name="M_btn_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H15N2O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NOSR" hasOnlySubstanceUnits="true" id="M_cystrna_c" metaid="f79ecc3e-685c-48e1-80dc-e13aa96fbbed" name="L_Cysteinyl_tRNA_Cys_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NOSR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15O2" hasOnlySubstanceUnits="true" id="M_octa_c" metaid="cc6b7289-42de-4e34-8da9-691d9ccc8500" name="octanoate__n_C8_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H15N2O3S" hasOnlySubstanceUnits="true" id="M_btn_p" metaid="_749e35e8-ab24-45d7-93ba-1afe7f049832" name="M_btn_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H15N2O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8NO4PS" hasOnlySubstanceUnits="true" id="M_4mpetz_c" metaid="cd921023-9544-4ec4-b121-887e4358d966" name="4_Methyl_5__2_phosphoethyl__thiazole" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8NO4PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H13N2O2" hasOnlySubstanceUnits="true" id="M_orn_c" metaid="c72afa0a-cfdb-4bcf-ab8d-2d7b74fb2088" name="Ornithine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H13N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NOR" hasOnlySubstanceUnits="true" id="M_valtrna_c" metaid="_4251ba8b-01cc-4752-9443-08cef24bdb93" name="L_Valyl_tRNA_Val_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnagly_c" metaid="_9c1bcdbe-60da-4ece-bd5a-0a9bf30c26b0" name="tRNA_Gly_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H13N2O2" hasOnlySubstanceUnits="true" id="M_orn_e" metaid="_86686940-58f7-40a6-b87b-9bcfb66c59e9" name="Ornithine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H13N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H36N7O19P3S" hasOnlySubstanceUnits="true" id="M_malcoame_c" metaid="_1052078b-3eba-478d-9087-7b7e0e161b42" name="malonyl_CoA_methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H36N7O19P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_h2o_e" metaid="e11a6b2b-0b7e-4a36-8a04-0af722bbf9c1" name="H2O" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H32N4O4" hasOnlySubstanceUnits="true" id="M_ppp9_c" metaid="d533814d-ad29-4c19-8387-463c4c6fa319" name="Protoporphyrin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H32N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2" hasOnlySubstanceUnits="true" id="M_co2_e" metaid="_3421dea5-b95e-4be2-b898-7349691945a2" name="Carbon_dioxide_CO2" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O" hasOnlySubstanceUnits="true" id="M_h2o_c" metaid="ba40bb8c-cf64-404e-9faa-1c5435e09c2c" name="H2O" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H15N2O3S" hasOnlySubstanceUnits="true" id="M_btn_c" metaid="e34048c3-50fa-419d-9e5d-ac985f6fdf30" name="Biotin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H15N2O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2" hasOnlySubstanceUnits="true" id="M_co2_c" metaid="_7f7c8e07-16ce-490f-b701-6cfb7edd1cc5" name="Carbon_dioxide_CO2" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O8P" hasOnlySubstanceUnits="true" id="M_cmp_c" metaid="ce3a8631-3514-4927-a5fc-9266053df778" name="CMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H15N2O5" hasOnlySubstanceUnits="true" id="M_sucorn_c" metaid="_49eee4fa-a32f-4d62-99a1-a758a3e171b8" name="M_sucorn_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H15N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11O7P" hasOnlySubstanceUnits="true" id="M_2me4p_c" metaid="_74b04e95-84b3-4aab-94da-f8858bd56b44" name="2_C_methyl_D_erythritol_4_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C107H177N29O29S2" hasOnlySubstanceUnits="true" id="M_LesA_e" metaid="_795a3dc1-b108-47e4-82da-a966f9204c0e" name="M_LesA_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C107H177N29O29S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H61O13P2" hasOnlySubstanceUnits="true" id="M_pgp141_c" metaid="_7bc2cd0a-2755-4383-9602-b2b68e04de0e" name="Phosphatidylglycerophosphate__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H61O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C107H177N29O29S2" hasOnlySubstanceUnits="true" id="M_LesA_c" metaid="_9a311e5a-f85b-4af7-83b1-307bb1e1a41e" name="M_LesA_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C107H177N29O29S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H24N10O21P4" hasOnlySubstanceUnits="true" id="M_gp4g_c" metaid="_7f862854-7604-4f31-90ef-06ec0af81a4a" name="P1_P4_Bis_5__guanosyl__tetraphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H24N10O21P4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HSe" hasOnlySubstanceUnits="true" id="M_seln_c" metaid="_7f45bce4-645d-4eb0-a162-61532f8bb480" name="Selenide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HSe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="CO2" hasOnlySubstanceUnits="true" id="M_co2_p" metaid="e3fda4fd-1cd7-4cfc-9921-a79e27f8ce10" name="Carbon_dioxide_CO2" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H10O5" hasOnlySubstanceUnits="true" id="M_3c3hmp_c" metaid="_216d7643-f563-44c8-9cd7-6c6f804a68b7" name="3_Carboxy_3_hydroxy_4_methylpentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H66N7O17P3S" hasOnlySubstanceUnits="true" id="M_stcoa_c" metaid="bded8546-6745-4b87-a769-96038f1148b6" name="Stearoyl_CoA__n_C18_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H66N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C44H79N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdhdecg_c" metaid="_71e9eef0-13ec-4a15-ae4e-41e4f8012ba2" name="CDP_1_2_dihexadecanoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C44H79N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H61O13P2" hasOnlySubstanceUnits="true" id="M_pgp141_p" metaid="f1441528-9bed-4ed1-81d1-40a0e3d45edf" name="Phosphatidylglycerophosphate__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H61O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H12O11P" hasOnlySubstanceUnits="true" id="M_kdo8p_c" metaid="_3870b262-b055-423b-82f9-cceb24028cf0" name="3_Deoxy_D_manno_octulosonate_8_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H12O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H21N4O9P" hasOnlySubstanceUnits="true" id="M_fmnh2_c" metaid="fbc52601-3142-4153-a874-df831c3329e3" name="Reduced_FMN" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H21N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_f1p_c" metaid="_732925ea-c862-44b5-b095-fc72f48c84c1" name="D_Fructose_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C80H124N16O42" hasOnlySubstanceUnits="true" id="M_murein5p5p_p" metaid="_767502c9-bffc-4038-9454-353c3eec46b5" name="two_linked_disacharide_pentapeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C80H124N16O42</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H63O8P" hasOnlySubstanceUnits="true" id="M_pa161_p" metaid="_859222c2-bac6-476c-aec6-1e01bb937695" name="1_2_dihexadec_9_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H63O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H25N2O8PRS" hasOnlySubstanceUnits="true" id="M_but2eACP_c" metaid="e30db6f9-3447-42ac-bfd6-6c005ac804b3" name="But_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H25N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H58N7O17P3S" hasOnlySubstanceUnits="true" id="M_tdcoa_c" metaid="_40b38630-6ac7-4df3-b3d1-b8b6c5937bf9" name="Tetradecanoyl_CoA__n_C14_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H58N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C107H177N29O29S2" hasOnlySubstanceUnits="true" id="M_LesA_p" metaid="fab00509-5733-4be1-812b-dcd3bf58f433" name="M_LesA_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C107H177N29O29S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H18O11P" hasOnlySubstanceUnits="true" id="M_g3pi_p" metaid="_0c73fa4a-1bce-4d13-84df-e0da19418edc" name="sn_Glycero_3_phospho_1_inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H18O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H29O7P1" hasOnlySubstanceUnits="true" id="M_1ddecg3p_c" metaid="ecffca5d-e302-4a6b-831c-ea3a5c41242e" name="1_dodecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H29O7P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H63O8P" hasOnlySubstanceUnits="true" id="M_pa161_c" metaid="_435728ef-032c-4a1e-b01c-fa04d674b275" name="1_2_dihexadec_9_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H63O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C49H76O4" hasOnlySubstanceUnits="true" id="M_q8h2_c" metaid="_4974a112-1b7c-4849-ba38-76daac76671f" name="Ubiquinol_8" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C49H76O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C940H1548N8O661P8" hasOnlySubstanceUnits="true" id="M_core_kdo2lip6_XF_p" metaid="cff7fb8f-ce56-4a84-acd8-a2651d1805c3" name="M_core_kdo2lip6_XF_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C940H1548N8O661P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="HPO4" hasOnlySubstanceUnits="true" id="M_pi_e" metaid="_42bc2734-835b-4640-9646-02c816f521ca" name="Phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HPO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C71H109N13O39" hasOnlySubstanceUnits="true" id="M_murein4p3p_p" metaid="f8f7d39e-bdaa-4ee9-814d-c0b4ec9160f5" name="two_linked_disacharide_tetrapeptide_and_tripeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C71H109N13O39</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="HPO4" hasOnlySubstanceUnits="true" id="M_pi_p" metaid="_61d6192c-12fb-4874-8564-e8046e4c5c4b" name="Phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HPO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O2" hasOnlySubstanceUnits="true" id="M_ac_p" metaid="_5b78739f-a245-49b5-a6c1-569bfc8d4190" name="Acetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H23N5O15P2" hasOnlySubstanceUnits="true" id="M_gdp6dm_c" metaid="f67b76aa-cca5-41d4-aa13-b154bd82377c" name="M_gdp6dm_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H23N5O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaser_c" metaid="_94ef3223-799e-471a-a1c8-613e870c7f5d" name="tRNA_Ser_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H18O11P" hasOnlySubstanceUnits="true" id="M_g3pi_c" metaid="fc2173d0-12bd-44f8-89a1-2a39027bfe36" name="sn_Glycero_3_phospho_1_inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H18O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H27N3O15" hasOnlySubstanceUnits="true" id="M_enter_c" metaid="e0461604-6ffb-422a-b6b7-7b113fa01607" name="M_enter_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H27N3O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H18O11P" hasOnlySubstanceUnits="true" id="M_g3pi_e" metaid="_4b9027db-81ed-47db-90e0-74b9277095ad" name="sn_Glycero_3_phospho_1_inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H18O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H27N3O15" hasOnlySubstanceUnits="true" id="M_enter_e" metaid="_5703cd1f-aea5-4cf1-8f7d-5f9cf0f72c8d" name="M_enter_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H27N3O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaasn_c" metaid="_1e5964c2-05d7-4d2a-a5b9-dec66466ab0e" name="M_trnaasn_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="R" hasOnlySubstanceUnits="true" id="M_CopA_p" metaid="_12b71ebf-a259-4f49-8429-b7845a88e872" name="Protein_CopA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H30N6O12S2" hasOnlySubstanceUnits="true" id="M_gthox_c" metaid="c7bf02ef-66b8-4dc1-9026-53fec7f7feee" name="Oxidized_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H30N6O12S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C940H1548N8O661P8" hasOnlySubstanceUnits="true" id="M_core_kdo2lip6_XF_c" metaid="_523bd485-6a20-4c1c-ba49-a4bcd8e839f5" name="M_core_kdo2lip6_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C940H1548N8O661P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C940H1548N8O661P8" hasOnlySubstanceUnits="true" id="M_core_kdo2lip6_XF_e" metaid="_3c4b17e4-1a58-4d30-a679-831996c94151" name="M_core_kdo2lip6_XF_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C940H1548N8O661P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H27N2O11PRS" hasOnlySubstanceUnits="true" id="M_ogmeACP_c" metaid="_83613f5f-54e6-4465-b92a-7751cae06841" name="3_Oxo_glutaryl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H27N2O11PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaleu_c" metaid="_107bbd4f-b67f-4387-9455-7b833fcf6e1e" name="tRNA_Leu_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnalys_c" metaid="_79f3e812-04d9-429e-be7d-00d183252771" name="tRNA_Lys_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O6P" hasOnlySubstanceUnits="true" id="M_g3p_c" metaid="_2455d675-97e0-427d-80b5-ef339cc6e2ac" name="Glyceraldehyde_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H27N3O15" hasOnlySubstanceUnits="true" id="M_enter_p" metaid="_36d171ac-68e5-47ea-84de-7f657cad5803" name="M_enter_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H27N3O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2Se" hasOnlySubstanceUnits="true" id="M_selcys_c" metaid="_2ef535bc-d692-4e1e-9cc9-ce51d614b918" name="M_selcys_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O3" hasOnlySubstanceUnits="true" id="M_acorn_c" metaid="_2df9a240-cce3-45d5-92ab-8d8b55b249ba" name="N2_Acetyl_L_ornithine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HPO4" hasOnlySubstanceUnits="true" id="M_pi_c" metaid="b321ede9-f332-40f5-bd9c-8757e9fae686" name="Phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HPO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H30N6O12S2" hasOnlySubstanceUnits="true" id="M_gthox_e" metaid="cb7ad6c5-1d9d-46be-985b-1580063ca9d6" name="Oxidized_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H30N6O12S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2R" hasOnlySubstanceUnits="true" id="M_sertrna_sec_c" metaid="_813b9900-7e83-4d33-8f58-d813654969ef" name="M_sertrna_sec_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11NO4" hasOnlySubstanceUnits="true" id="M_achms_c" metaid="_654b6487-592d-4ac2-9d08-f499b6df30b3" name="O_Acetyl_L_homoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H21N7O7" hasOnlySubstanceUnits="true" id="M_10fthf_c" metaid="a18c185f-3892-48a6-9c88-b7d7fb0619e6" name="10_Formyltetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H21N7O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H32N7O16P3S" hasOnlySubstanceUnits="true" id="M_coa_c" metaid="c9061d98-c8fc-433d-a37f-e984fe545067" name="Coenzyme_A" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H32N7O16P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O2S" hasOnlySubstanceUnits="true" id="M_so2_c" metaid="_20457c4d-2162-49a6-807b-5e5f4d4227af" name="M_so2_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O" hasOnlySubstanceUnits="true" id="M_acald_p" metaid="_3d51ca32-ee50-4913-a791-0c41f0989c06" name="M_acald_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6NO4" hasOnlySubstanceUnits="true" id="M_2ogm_c" metaid="_5884f0fd-9263-47df-88ea-da40d9d374e3" name="M_2ogm_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N5O6S" hasOnlySubstanceUnits="true" id="M_amob_c" metaid="_1d835c16-17ae-4d73-93bb-36cb6d93ba15" name="S_Adenosyl_4_methylthio_2_oxobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H19N5O6S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O" hasOnlySubstanceUnits="true" id="M_acald_e" metaid="_0abd461f-9a15-4211-9311-ce43c62aab62" name="M_acald_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O" hasOnlySubstanceUnits="true" id="M_acald_c" metaid="_143625ae-b64c-4fb0-80f6-9efe13a7b9d0" name="Acetaldehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8N5O3" hasOnlySubstanceUnits="true" id="M_cph4_c" metaid="afd05253-971f-4a66-8b65-5ac1f306509d" name="6_carboxy_5_6_7_8_tetrahydropterin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H8N5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H24N2O16P2" hasOnlySubstanceUnits="true" id="M_dtdpglu_c" metaid="_0bba1122-5723-4fd3-8f21-e2e91020abec" name="dTDPglucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H24N2O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O7PS" hasOnlySubstanceUnits="true" id="M_5mdr1p_c" metaid="_184f9078-bb7d-46cf-8a62-b5539976b76d" name="M_5mdr1p_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O7PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C55H89O7P2" hasOnlySubstanceUnits="true" id="M_udcpdp_c" metaid="ad0e2184-1624-418e-9618-17b79197331f" name="Undecaprenyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C55H89O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Mg" hasOnlySubstanceUnits="true" id="M_mg2_c" metaid="_8d2dc306-1ffd-4add-8283-c1b37704bcb9" name="Magnesium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mg</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H21N7O7" hasOnlySubstanceUnits="true" id="M_5fthf_c" metaid="acdfb364-95bd-4e0e-a46f-f1920c900da7" name="5_Formyltetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H21N7O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H49N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hcpalm9eACP_c" metaid="f543c9a3-fd16-4ccb-9272-7617c7a973f0" name="R__3_hydroxy_cis_palm_9_eoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H49N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H82NO8P" hasOnlySubstanceUnits="true" id="M_pe180_c" metaid="_4048579e-4f31-481a-947b-5325a88a525f" name="phosphatidylethanolamine__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41H82NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="S4Fe4" hasOnlySubstanceUnits="true" id="M_4fe4s_c" metaid="_9b98389e-5f17-43b1-97af-987fda6edd76" name="4Fe_4S__iron_sulfur_cluster" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: S4Fe4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Mg" hasOnlySubstanceUnits="true" id="M_mg2_e" metaid="_6204c224-60fd-496c-ae7d-3a640cf96806" name="Magnesium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mg</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O5" hasOnlySubstanceUnits="true" id="M_gsn_c" metaid="_675aea4f-9d89-4316-b21d-8835e7bdf088" name="Guanosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5O" hasOnlySubstanceUnits="true" id="M_gua_p" metaid="bd079a49-4a78-4596-b5a4-e1e2e0ce31a1" name="M_gua_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="S" hasOnlySubstanceUnits="true" id="M_s_c" metaid="_0abe441f-373f-44a8-a346-438e07c487ed" name="M_s_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="S" hasOnlySubstanceUnits="true" id="M_s_e" metaid="_02ce892b-ee70-4605-826f-fac5cfb92aa4" name="M_s_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H23N6O5S" hasOnlySubstanceUnits="true" id="M_amet_c" metaid="_05c3b996-37d0-476c-bd6b-8e86a72850b0" name="S_Adenosyl_L_methionine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H23N6O5S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C800H1302N100O501" hasOnlySubstanceUnits="true" id="M_chitin_polymer_e" metaid="_2f386823-86f0-417b-a5d8-4ddbd63d6fe5" name="M_chitin_polymer_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C800H1302N100O501</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H82NO8P" hasOnlySubstanceUnits="true" id="M_pe180_p" metaid="_4aa176f4-546c-4bce-bbbc-259d7819815a" name="phosphatidylethanolamine__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41H82NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H12N3O7P" hasOnlySubstanceUnits="true" id="M_air_c" metaid="bafef441-55b1-482a-83ef-2628e0331c85" name="5_amino_1__5_phospho_D_ribosyl_imidazole" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H12N3O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H57N1O10P1" hasOnlySubstanceUnits="true" id="M_ps120_c" metaid="_7286fb91-0c02-49b2-9a94-7e458d73ae30" name="phosphatidylserine__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H57N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N2OR" hasOnlySubstanceUnits="true" id="M_lystrna_c" metaid="adb25803-b9e7-4b8b-a860-1b9ffd6ad032" name="L_Lysine_tRNA__Lys_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N2OR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5O" hasOnlySubstanceUnits="true" id="M_gua_e" metaid="b20f58dc-f884-461b-a907-84d41e230386" name="M_gua_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5O" hasOnlySubstanceUnits="true" id="M_gua_c" metaid="_8174d229-a534-4c7b-b1e1-9157c17c78fb" name="Guanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Mg" hasOnlySubstanceUnits="true" id="M_mg2_p" metaid="_3478a092-b7f3-4a06-b4b7-2932b0c98361" name="Magnesium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mg</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO2R" hasOnlySubstanceUnits="true" id="M_tyrtrna_c" metaid="_104ba3cc-a31b-4300-b87d-1d71d75e5eb4" name="L_Tyrosyl_tRNA_Tyr_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11NO2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H20N4O6" hasOnlySubstanceUnits="true" id="M_ribflv_c" metaid="_355d6a80-123c-435c-86bd-93b68e593626" name="Riboflavin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H20N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H20N2O9PS" hasOnlySubstanceUnits="true" id="M_4ppcys_c" metaid="_2279bafc-1eda-409b-8625-74311a00675d" name="N___R__4_Phosphopantothenoyl__L_cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H20N2O9PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H65O7P2" hasOnlySubstanceUnits="true" id="M_octdp_c" metaid="_699d66d7-799f-41db-829e-575eb4fd5124" name="all_trans_Octaprenyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C40H65O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H30N6O12S2" hasOnlySubstanceUnits="true" id="M_gthox_p" metaid="_26ddbc66-1814-4d9a-99fa-e789983744f4" name="Oxidized_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H30N6O12S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H7N2O3" hasOnlySubstanceUnits="true" id="M_4izp_c" metaid="_35b8c0ec-00e3-478a-8b32-e6ea450f48ca" name="4_Imidazolone_5_propanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H7N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5N4O3" hasOnlySubstanceUnits="true" id="M_cdg_c" metaid="ba9e8d8e-5f5a-4d46-a4eb-ee9bc01d6cc8" name="7_deaza_7_carboxyguanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5N4O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="true" id="M_BIOMASS_XF_c" metaid="_977000d3-3f7b-4a5e-9b66-f76349244748" name="M_BIOMASS_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41.554061837540075H71.78553537948964N9.85382400884015O14.938244017389934P0.8811200258000156R1.27675647831893E-15Mn7.34919E-4Mo7.37685E-6Cl0.005532639K0.207473951Co2.67411E-5Cu7.53361E-4S0.24700915678000002Zn3.62388E-4Mg0.009221064Ni3.43024E-4Ca0.005532639Fe0.017346515399999998</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O6" hasOnlySubstanceUnits="true" id="M_2ins_c" metaid="_18dda0b7-ffe4-4fbe-bea5-0c48a7b1fba9" name="2_Inosose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H6NO2" hasOnlySubstanceUnits="true" id="M_4abz_c" metaid="c3252fbe-8ecb-4cea-a46e-72ae990ae870" name="4_Aminobenzoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H6NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N5O14P2" hasOnlySubstanceUnits="true" id="M_prbamp_c" metaid="_9b62d40a-b552-45b2-bcaa-e6abfc107cf8" name="1__5_Phosphoribosyl__AMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H19N5O14P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="MoO4" hasOnlySubstanceUnits="true" id="M_mobd_p" metaid="ddf06dd7-4534-41b4-b9f5-4bfa80feb7e8" name="Molybdate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: MoO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O2" hasOnlySubstanceUnits="true" id="M_ac_c" metaid="_9fa08c5e-81e9-4b89-bd09-002a3b6a40a1" name="Acetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C55H89O7P2" hasOnlySubstanceUnits="true" id="M_udcpdp_p" metaid="a5341159-851e-4f2b-8b6c-1a0bef5d110f" name="Undecaprenyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C55H89O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O2" hasOnlySubstanceUnits="true" id="M_ac_e" metaid="b8c75f41-aa81-415f-adca-07a804537370" name="Acetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7O2S" hasOnlySubstanceUnits="true" id="M_mtpp_c" metaid="_5168e61b-5473-429a-af16-459b37a372fa" name="M_mtpp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7O2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H45N2O9PRS" hasOnlySubstanceUnits="true" id="M_3omrsACP_c" metaid="b6f11f96-e986-4bb4-8cfa-769c56fd0286" name="3_Oxotetradecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H45N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H28N2O11" hasOnlySubstanceUnits="true" id="M_chtbs_e" metaid="bfff0b3d-04c2-4d68-be9f-36697be6f607" name="N_N_diacetylchitobiose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H28N2O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6N2O5" hasOnlySubstanceUnits="true" id="M_cbasp_c" metaid="_1955851f-53a2-41d8-810e-c6a10d53f245" name="N_Carbamoyl_L_aspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H28N2O11" hasOnlySubstanceUnits="true" id="M_chtbs_c" metaid="_95bfee1b-96ad-46c3-ad16-1dec0a80adde" name="N_N_diacetylchitobiose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H28N2O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P" hasOnlySubstanceUnits="true" id="M_g3pc_c" metaid="_618ce2bf-2ed0-4cb8-aaa2-7c81d5cc9570" name="sn_Glycero_3_phosphocholine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H20NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H69O13P2" hasOnlySubstanceUnits="true" id="M_pgp161_c" metaid="_4c529996-78c3-4952-99e8-fba13ecc8f9f" name="Phosphatidylglycerophosphate__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H69O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="H2S" hasOnlySubstanceUnits="true" id="M_h2s_p" metaid="fae23ffb-3137-4836-bcf0-8783b4e71fdc" name="Hydrogen_sulfide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P" hasOnlySubstanceUnits="true" id="M_g3pc_e" metaid="_3a4a7647-cc01-4b46-a0ed-e2caca8ae008" name="sn_Glycero_3_phosphocholine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H20NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H23O2" hasOnlySubstanceUnits="true" id="M_ddca_e" metaid="_122ad39f-5de6-42b6-ba49-0c2c3585b9f4" name="Dodecanoate__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H23O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H28N2O11" hasOnlySubstanceUnits="true" id="M_chtbs_p" metaid="d8376137-fc3d-4416-9fda-76a02f848570" name="N_N_diacetylchitobiose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H28N2O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N2O18P2" hasOnlySubstanceUnits="true" id="M_udpgalur_c" metaid="_3e478232-7397-4d11-856d-df50f0daaac3" name="M_udpgalur_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H19N2O18P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H22N3" hasOnlySubstanceUnits="true" id="M_spmd_e" metaid="ff16cf44-82b1-4346-94e1-245b42443e1a" name="Spermidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H22N3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O3" hasOnlySubstanceUnits="true" id="M_glyc_p" metaid="_6c5d646c-4449-4507-ad71-ba318ebaf4df" name="Glycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H8O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N3O4" hasOnlySubstanceUnits="true" id="M_dcyt_c" metaid="e43f2edb-9189-4fbb-a1f9-430eb760eae3" name="Deoxycytidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N3O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H23O2" hasOnlySubstanceUnits="true" id="M_ddca_c" metaid="c682527b-94e1-4c8a-87df-9517957f0965" name="Dodecanoate__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H23O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C68H102N12O37" hasOnlySubstanceUnits="true" id="M_murein3px3p_p" metaid="_476f5504-6060-4a5b-ba42-ea0c14f37e1a" name="two_disacharide_linked_murein_units__tripeptide_crosslinked_tripeptide__A2pm__A2pm___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C68H102N12O37</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C64H115N2O30P2" hasOnlySubstanceUnits="true" id="M_kdolipid4_XF_c" metaid="_8f6f558e-3e61-4022-81a0-821f62a0529c" name="M_kdolipid4_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C64H115N2O30P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H22N3" hasOnlySubstanceUnits="true" id="M_spmd_c" metaid="_1bc902f1-27a8-40e4-ac43-2f6dadec93e3" name="Spermidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H22N3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O12P2" hasOnlySubstanceUnits="true" id="M_udp_c" metaid="_886d8581-de18-42c5-b2f3-5bd554ba92bd" name="UDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O12P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H53N2O8PRS" hasOnlySubstanceUnits="true" id="M_octeACP_c" metaid="_6fc1220a-b131-4747-81f2-970e39a8f3aa" name="cis_octadec_11_enoyl__acyl_carrier_protein___n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H53N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H3N2O4" hasOnlySubstanceUnits="true" id="M_orot_c" metaid="_9892e8f7-cd75-424c-9921-d2e5441a9bf2" name="Orotate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H3N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H22N3" hasOnlySubstanceUnits="true" id="M_spmd_p" metaid="_88096ddb-8776-4948-a7de-e0cf40e74b5d" name="Spermidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H22N3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N4O2" hasOnlySubstanceUnits="true" id="M_arg_L_c" metaid="_94c434a4-5a34-4449-8db4-853c81a64cc9" name="L_Arginine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N4O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H19N4O9P" hasOnlySubstanceUnits="true" id="M_fmn_c" metaid="_5ad4d4a7-2aa3-47bd-8e30-3d523930f1e9" name="FMN" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H19N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H22N4O6" hasOnlySubstanceUnits="true" id="M_rbflvrd_c" metaid="a6e8fe44-0f41-4834-91f6-6edf74df2da0" name="M_rbflvrd_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H22N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N4O2" hasOnlySubstanceUnits="true" id="M_arg_L_e" metaid="_0c8316dc-3ba0-49d6-a957-aae85d9e7cad" name="L_Arginine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N4O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H69O13P2" hasOnlySubstanceUnits="true" id="M_pgp161_p" metaid="a0da53b8-c792-41ba-8484-f4ec21057617" name="Phosphatidylglycerophosphate__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H69O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O3" hasOnlySubstanceUnits="true" id="M_glyc_c" metaid="_9df2aff8-e262-4ebe-9101-31dd63ea3f87" name="Glycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H8O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N5O20P4" hasOnlySubstanceUnits="true" id="M_prbatp_c" metaid="f7a1bbc2-1d49-4a51-969c-3e4ea072aa16" name="1__5_Phosphoribosyl__ATP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H19N5O20P4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O11P2" hasOnlySubstanceUnits="true" id="M_cdp_c" metaid="_12dfc747-9d1d-42fc-8415-cef561969dd8" name="CDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O11P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H8O3" hasOnlySubstanceUnits="true" id="M_glyc_e" metaid="_36ac6ef4-5949-4647-ae8e-7d19fdfdb042" name="Glycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H8O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O4" hasOnlySubstanceUnits="true" id="M_pant_R_c" metaid="ba5bdbf6-327c-4868-bdb6-05e79154bf88" name="R__Pantoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N4O2" hasOnlySubstanceUnits="true" id="M_arg_L_p" metaid="e75fff8e-1303-4870-b151-b37a796d810c" name="L_Arginine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N4O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H62O10P1" hasOnlySubstanceUnits="true" id="M_pg141_c" metaid="_396efca1-3737-4da9-801b-835aba9e0d3b" name="Phosphatidylglycerol__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H62O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H3N2O4" hasOnlySubstanceUnits="true" id="M_orot_p" metaid="f3256e54-e8cb-4076-a633-48b7d04e0753" name="Orotate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H3N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="CHO2" hasOnlySubstanceUnits="true" id="M_for_p" metaid="_94e1c75d-9258-432e-a9f0-c5510773ae4b" name="Formate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CHO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="O4S" hasOnlySubstanceUnits="true" id="M_so4_e" metaid="_75423fa7-d028-4ccd-87fd-e54fb68a549e" name="Sulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O4S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5O6" hasOnlySubstanceUnits="true" id="M_2mcacn_c" metaid="_0369c556-1309-46b7-911c-c8ae4028fa9e" name="cis_2_Methylaconitate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H71O8P1" hasOnlySubstanceUnits="true" id="M_pa181_p" metaid="_53a3581f-53a2-4327-bd2e-d961186629d2" name="1_2_dioctadec_11_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H71O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O4S" hasOnlySubstanceUnits="true" id="M_so4_c" metaid="_5d8acb70-ed97-4be9-8bf7-0924b2df4903" name="Sulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O4S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H3N2O4" hasOnlySubstanceUnits="true" id="M_orot_e" metaid="_2a2ef40d-c0e1-43a3-b035-3f8c6aad8341" name="Orotate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H3N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="O4S" hasOnlySubstanceUnits="true" id="M_so4_p" metaid="_0e3610ce-7c67-4912-b48c-247cfa74a857" name="Sulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O4S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="H2S" hasOnlySubstanceUnits="true" id="M_h2s_e" metaid="_2a472705-813d-43ca-bc43-a33f7afca219" name="Hydrogen_sulfide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2S" hasOnlySubstanceUnits="true" id="M_h2s_c" metaid="ad954544-7662-42d5-800f-2f227ad2acaf" name="Hydrogen_sulfide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H71O8P1" hasOnlySubstanceUnits="true" id="M_pa181_c" metaid="_2726332e-0f8d-4091-a348-94bdb68d7b10" name="1_2_dioctadec_11_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H71O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H21O14P" hasOnlySubstanceUnits="true" id="M_tre6p_c" metaid="_1a6fc82e-1e0c-4fc2-99eb-4550d4c85a83" name="alpha_alpha__Trehalose_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H21O14P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O7P" hasOnlySubstanceUnits="true" id="M_dxyl5p_c" metaid="f1d8ed1b-b19b-4fde-8fcd-c8e21723c2b3" name="1_deoxy_D_xylulose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H62O10P1" hasOnlySubstanceUnits="true" id="M_pg141_p" metaid="_2a7a19c8-9350-4c9e-a897-932010c24e8e" name="Phosphatidylglycerol__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H62O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5" hasOnlySubstanceUnits="true" id="M_ade_p" metaid="_88c0f2d2-4508-4acc-bf5f-a0d5b625e467" name="Adenine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3O2" hasOnlySubstanceUnits="true" id="M_his_L_p" metaid="d0fff8a7-0697-486a-bf94-43f3a5b74cba" name="L_Histidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C63H103O11N1P2" hasOnlySubstanceUnits="true" id="M_f2Nappudp_c" metaid="bb9d8548-b26d-4f7a-b0d4-1f504d604de4" name="M_f2Nappudp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C63H103O11N1P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_fru_p" metaid="_69c8f14d-d64c-4d8c-9a77-25967c14aa76" name="D_Fructose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H2NO2" hasOnlySubstanceUnits="true" id="M_dhgly_c" metaid="_7254c1c8-5a1c-4d57-8589-aeecd451abfd" name="M_dhgly_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H2NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C33H66N1O8P1" hasOnlySubstanceUnits="true" id="M_pe140_c" metaid="_8245318c-ed8c-49d2-84fc-e779a60f1962" name="phosphatidylethanolamine__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C33H66N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3O2" hasOnlySubstanceUnits="true" id="M_his_L_e" metaid="_8f084f1e-30e1-4cb4-bcb6-460cd5e20606" name="L_Histidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3O2" hasOnlySubstanceUnits="true" id="M_his_L_c" metaid="_61773072-1fb7-4ec7-ac8f-2390ada500aa" name="L_Histidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N3O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O12P2" hasOnlySubstanceUnits="true" id="M_fdp_c" metaid="_6ccf20bf-c7be-4f81-a98e-3f4d6b73a91c" name="D_Fructose_1_6_bisphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O12P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C111H169N21O59" hasOnlySubstanceUnits="true" id="M_murein4px4p4p_p" metaid="_4cb12875-094c-41d1-94ff-bc20d2e0fbd7" name="three_disacharide_linked_murein_units__tetrapeptide_crosslinked_tetrapeptide__A2pm__D_ala___one_uncrosslinked_tetrapaptide___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C111H169N21O59</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H73N1O10P1" hasOnlySubstanceUnits="true" id="M_ps160_c" metaid="b76187c5-3735-4406-9f26-251c7ca293bc" name="phosphatidylserine__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H73N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C33H66N1O8P1" hasOnlySubstanceUnits="true" id="M_pe140_p" metaid="bf97d63f-337c-4ba2-a1db-c9d2ed5dfe73" name="phosphatidylethanolamine__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C33H66N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H7O5" hasOnlySubstanceUnits="true" id="M_3dhsk_c" metaid="_041d6376-f95e-45b0-9bdd-fac22a1cf373" name="3_Dehydroshikimate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H7O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H14N3O4" hasOnlySubstanceUnits="true" id="M_accitr_c" metaid="b0c01965-2d7a-4351-9104-cb4d34ab2630" name="M_accitr_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H14N3O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O13P3" hasOnlySubstanceUnits="true" id="M_ditp_c" metaid="dfef8771-f0e8-476f-84ae-980d23f32ed1" name="dITP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O13P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H15N5O4" hasOnlySubstanceUnits="true" id="M_thbpt4acam_c" metaid="f1c18f41-2bc6-4b31-b2ec-468cb38d0dca" name="Tetrahydrobiopterin_4a_carbinolamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H15N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C65H124O17P2" hasOnlySubstanceUnits="true" id="M_clpn140_p" metaid="d976ebdc-3b64-4c21-b18c-e8002752fbda" name="cardiolipin__tetratetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C65H124O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C34FeH30N4O4" hasOnlySubstanceUnits="true" id="M_pheme_e" metaid="_3b4e271f-4b4f-46be-b161-64021c86a3fd" name="M_pheme_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34FeH30N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O8P" hasOnlySubstanceUnits="true" id="M_ohpb_c" metaid="_43cfdd25-bc13-446b-b54b-1c3ecd101f70" name="2_Oxo_3_hydroxy_4_phosphobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H24N3O15P" hasOnlySubstanceUnits="true" id="M_ckdo_c" metaid="_7358cc12-80df-4e0c-938a-3256918f1736" name="CMP_3_deoxy_D_manno_octulosonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H24N3O15P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3" hasOnlySubstanceUnits="true" id="M_thr_L_p" metaid="ef6fc25f-dc22-448e-ac56-09bb7cd71dd7" name="L_Threonine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HSR" hasOnlySubstanceUnits="true" id="M_iscs_c" metaid="_22cb5b73-fbba-4c16-a2ed-1e9242363b30" name="IscS_sulfur_acceptor_protein" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HSR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13N2O5S" hasOnlySubstanceUnits="true" id="M_glucys_c" metaid="f236c86d-42fa-4142-b0e7-d89e523011c4" name="gamma_L_Glutamyl_L_cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H13N2O5S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12N2OR" hasOnlySubstanceUnits="true" id="M_trptrna_c" metaid="_0529dcc8-2336-4478-a8e2-4e0f631fa51b" name="L_Tryptophanyl_tRNA_Trp_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12N2OR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15O" hasOnlySubstanceUnits="true" id="M_octapb_c" metaid="f7686454-00d0-42f2-b814-35f5295d8038" name="octanoate__protein_bound_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34FeH30N4O4" hasOnlySubstanceUnits="true" id="M_pheme_c" metaid="_1abc66e7-59fa-40cd-88c1-4242cf1fa425" name="Protoheme" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34FeH30N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H3N" hasOnlySubstanceUnits="true" id="M_nh3_c" metaid="b86d4940-5cb3-4099-971b-2bcc661b41b7" name="M_nh3_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H3N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_fru_e" metaid="_4cb9c971-bd9c-48a4-a844-7414f11e8932" name="D_Fructose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H45N2O8PRS" hasOnlySubstanceUnits="true" id="M_tmrs2eACP_c" metaid="c4c1e4fd-5a97-403f-916f-593ac932e591" name="trans_Tetradec_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H45N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H14NO6P" hasOnlySubstanceUnits="true" id="M_g3pe_p" metaid="_57754263-bd27-4ea0-b4c9-9a119d3c8eed" name="sn_Glycero_3_phosphoethanolamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H14NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5" hasOnlySubstanceUnits="true" id="M_ade_e" metaid="_52f357c9-6dc1-429d-ad0d-51c134be17ad" name="Adenine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H35N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hoctACP_c" metaid="_4f206e71-6854-4ada-8bf4-c315e03c6c74" name="R__3_Hydroxyoctanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H35N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N5" hasOnlySubstanceUnits="true" id="M_ade_c" metaid="_400eef5a-a6b2-4fda-bfb1-350215ef981e" name="Adenine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_tag6p_D_c" metaid="_2fdadae5-7512-4e34-a916-92f11dfbc22d" name="M_tag6p_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H24N3" hasOnlySubstanceUnits="true" id="M_na15dap_c" metaid="_64ba78a0-186c-45a2-b118-8ec27de6bd9e" name="M_na15dap_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H24N3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7N" hasOnlySubstanceUnits="true" id="M_pheacnit_c" metaid="cfd55262-5b07-4537-8d4f-7589f090f6c0" name="Phenylacetonitrile" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H7N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6O8P" hasOnlySubstanceUnits="true" id="M_4per_c" metaid="_1f658f0f-13bc-4762-bb3d-5ab2ea667f37" name="4_Phospho_D_erythronate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H56N7O17P3S" hasOnlySubstanceUnits="true" id="M_tdecoa_c" metaid="_0e92c27a-f47c-4a45-adce-07b0220da4af" name="Tetradecenoyl_CoA__n_C14_1CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H56N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O9P2" hasOnlySubstanceUnits="true" id="M_2mecdp_c" metaid="_65745c5a-9ad9-4206-88c7-5d4a1d556609" name="2_C_methyl_D_erythritol_2_4_cyclodiphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O9P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H14NO6P" hasOnlySubstanceUnits="true" id="M_g3pe_c" metaid="_904be4a7-e1c6-4224-901a-ee9c05f9bd13" name="sn_Glycero_3_phosphoethanolamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H14NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H14NO6P" hasOnlySubstanceUnits="true" id="M_g3pe_e" metaid="_5163c9e9-c52c-43a2-aa1d-5212aa0df27f" name="sn_Glycero_3_phosphoethanolamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H14NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H9O3" hasOnlySubstanceUnits="true" id="M_tmoxdpq_c" metaid="_5dc181bf-7b30-4e56-a32b-2125c3f403ac" name="tetramethoxydiphenylquinone" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H9O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H30N6O12S2Se" hasOnlySubstanceUnits="true" id="M_dgslnt_c" metaid="a265ea4f-bf5e-4aca-8bca-8b5d5c1a15d4" name="M_dgslnt_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H30N6O12S2Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H38N4O17" hasOnlySubstanceUnits="true" id="M_hmbil_c" metaid="_12277419-30ac-46b8-a5c0-7da316ff20ec" name="Hydroxymethylbilane" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C40H38N4O17</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13N2O9P" hasOnlySubstanceUnits="true" id="M_fgam_c" metaid="_6f4ac80f-34f4-49cf-97d7-f2a191e7f6bd" name="N2_Formyl_N1__5_phospho_D_ribosyl_glycinamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H13N2O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_L_c" metaid="_4ce2e4aa-b2df-43a7-8dca-aed5ebdf3607" name="L_Cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_L_e" metaid="_46466521-2bd4-405a-a792-7e71ccb6e2a2" name="L_Cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="X" hasOnlySubstanceUnits="true" id="M_dsbgox_p" metaid="_3ccba35c-1507-4ef0-beb4-8e449643c06b" name="M_dsbgox_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NOR" hasOnlySubstanceUnits="true" id="M_leutrna_c" metaid="_5a4d57a8-8d7d-4c7c-b513-ba3118976bde" name="L_Leucyl_tRNA_Leu_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H13NO9P" hasOnlySubstanceUnits="true" id="M_2cpr5p_c" metaid="b943f4bf-1162-4b51-971c-2b5ca8356d8b" name="1__2_Carboxyphenylamino__1_deoxy_D_ribulose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H13NO9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H43N2O8PRS" hasOnlySubstanceUnits="true" id="M_t3c7mrseACP_c" metaid="f3aeb5ef-5d98-4c04-83cf-f75440550e36" name="trans_3_cis_7_myristoleoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H43N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34FeH30N4O4" hasOnlySubstanceUnits="true" id="M_pheme_p" metaid="_026945df-54db-48df-be4f-6d32c2a30bc4" name="M_pheme_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34FeH30N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C57H108O17P2" hasOnlySubstanceUnits="true" id="M_clpn120_p" metaid="eadfade5-58ca-408e-a1e6-177a0f674584" name="cardiolipin__tetradodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C57H108O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H24N6O3S" hasOnlySubstanceUnits="true" id="M_ametam_c" metaid="_90a70698-c4fd-42d3-a190-fce1e543592b" name="S_Adenosylmethioninamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H24N6O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H17N4O6" hasOnlySubstanceUnits="true" id="M_argsuc_c" metaid="_548dad0d-e810-4e0c-916f-533710098c69" name="N_omega___L_Arginino_succinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H17N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H57N7O20" hasOnlySubstanceUnits="true" id="M_anhgm4p_p" metaid="ef437769-d96e-486c-a0ac-7675c9c1f6b6" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H57N7O20</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H8NO6P" hasOnlySubstanceUnits="true" id="M_pydx5p_c" metaid="a265d20f-239c-4f2b-96e4-47806c52cb44" name="Pyridoxal_5__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H8NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C36H63N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdddecg_c" metaid="_5e0de559-0d9f-4aef-bea2-0424d18015d3" name="CDP_1_2_didodecanoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C36H63N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C26H39N5O14" hasOnlySubstanceUnits="true" id="M_anhm3p_c" metaid="_09dfe524-bbda-4378-a739-2054adc3159d" name="1_6_anhydrous_N_Acetylmuramyl_tripeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C26H39N5O14</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8N3O7P2" hasOnlySubstanceUnits="true" id="M_2mahmp_c" metaid="_8f0c1114-c946-4418-90a9-839ab1169ae7" name="2_Methyl_4_amino_5_hydroxymethylpyrimidine_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8N3O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H57N7O20" hasOnlySubstanceUnits="true" id="M_anhgm4p_c" metaid="ea3dd031-aa5c-47ed-910a-0abf1490feef" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H57N7O20</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_xu5p_L_c" metaid="_23436539-9e41-4a4d-a6d2-81cd76e0feb0" name="M_xu5p_L_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8O3S" hasOnlySubstanceUnits="true" id="M_4met2obut_c" metaid="_368e95c1-6823-484a-9e7b-8cf21f3f3edb" name="M_4met2obut_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H43N2O8PRS" hasOnlySubstanceUnits="true" id="M_ddcaACP_c" metaid="a40a1259-338c-48b2-806e-4b8876626406" name="Dodecanoyl_ACP__n_C12_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H43N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H34N7O17P3S" hasOnlySubstanceUnits="true" id="M_accoa_c" metaid="dc821adc-7533-46fc-b79a-b053bc224359" name="Acetyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H34N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C22H28N9O13P3S" hasOnlySubstanceUnits="true" id="M_athtp_c" metaid="_14063840-dfe8-4359-ad41-296aff807402" name="M_athtp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C22H28N9O13P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_man_e" metaid="ea9e4baf-ac95-4edd-9e5f-f6af023440fd" name="M_man_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnatrp_c" metaid="_4133f28a-dc52-4412-a730-8785003f0495" name="tRNA_Trp_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Cd" hasOnlySubstanceUnits="true" id="M_cd2_p" metaid="_68615065-261f-4adb-90dd-4169baae9fee" name="Cadmium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cd</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C26H43O25P" hasOnlySubstanceUnits="true" id="M_EPS_XF_p" metaid="_1425e0c1-5151-429b-82d0-690b4ac59ccc" name="M_EPS_XF_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C26H43O25P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_man_p" metaid="f7ff6e43-be3c-438a-8e9b-65925ce6ea46" name="M_man_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8N5O8P2" hasOnlySubstanceUnits="true" id="M_6hmhptpp_c" metaid="_409c710f-29d6-4d07-b8f4-d87df02cb571" name="6_hydroxymethyl_dihydropterin_pyrophosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H8N5O8P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6N4O3" hasOnlySubstanceUnits="true" id="M_alltn_c" metaid="_47bab33a-0766-4505-87e4-28d8a330b249" name="Allantoin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6N4O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Cd" hasOnlySubstanceUnits="true" id="M_cd2_e" metaid="_44d6e309-8a37-487d-99c4-d0bdb19e9ec2" name="Cadmium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cd</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N2O6" hasOnlySubstanceUnits="true" id="M_uri_c" metaid="f8983947-5a36-4518-b9bf-e2aef0578fdd" name="Uridine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N2O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CH2NO5P" hasOnlySubstanceUnits="true" id="M_cbp_c" metaid="b1c48880-7eb1-4123-981b-4ee1cea764b5" name="Carbamoyl_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH2NO5P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Cd" hasOnlySubstanceUnits="true" id="M_cd2_c" metaid="_4eed35d5-b595-421f-adaf-11b88f15f818" name="Cadmium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cd</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2HO3" hasOnlySubstanceUnits="true" id="M_glx_c" metaid="_674c32f1-edd7-40d6-a8bd-5f6faae95194" name="Glyoxylate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2HO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_L_p" metaid="b7003694-442e-48bd-a6fd-13dbdfd3041b" name="L_Cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8O8P" hasOnlySubstanceUnits="true" id="M_skm5p_c" metaid="_61c0b10c-e2ef-43ea-9718-a86f1544ca6e" name="M_skm5p_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H8O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C96H172N2O41P2" hasOnlySubstanceUnits="true" id="M_kdo2lipidA_XF_p" metaid="_1099b2b6-5b56-4daa-b70e-9a2872702c32" name="M_kdo2lipidA_XF_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C96H172N2O41P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_g1p_c" metaid="f0b1a5ef-33c9-4a08-92b5-7871d31dfeec" name="D_Glucose_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H22N2O15P2" hasOnlySubstanceUnits="true" id="M_dtdp4d6dm_c" metaid="_2a63a7ff-a67f-4f69-b544-8a572a3bc467" name="dTDP_4_dehydro_6_deoxy_L_mannose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H22N2O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C96H172N2O41P2" hasOnlySubstanceUnits="true" id="M_kdo2lipidA_XF_c" metaid="_502ee221-f070-45a1-b54b-0c150d3ff782" name="M_kdo2lipidA_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C96H172N2O41P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H21O14P" hasOnlySubstanceUnits="true" id="M_suc6p_c" metaid="_7253893e-3747-45d3-a25b-3efa6dbb7ecb" name="Sucrose_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H21O14P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C48H74O4" hasOnlySubstanceUnits="true" id="M_2omhmbl_c" metaid="f209ff94-a4fd-4bf0-a0b0-794f2dc7026f" name="2_Octaprenyl_3_methyl_5_hydroxy_6_methoxy_1_4_benzoquinol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C48H74O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C96H172N2O41P2" hasOnlySubstanceUnits="true" id="M_kdo2lipidA_XF_e" metaid="_69303646-b652-47d7-b28c-a06b743379f5" name="M_kdo2lipidA_XF_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C96H172N2O41P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C77H139N2O38P3" hasOnlySubstanceUnits="true" id="M_hphhlipidA_XF_c" metaid="_3e5799d3-05f9-4a49-96cc-7de3d1cc505c" name="M_hphhlipidA_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C77H139N2O38P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N2O5" hasOnlySubstanceUnits="true" id="M_duri_c" metaid="_34107222-3dde-46bf-9616-4a1acfd462f1" name="Deoxyuridine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc2p_p" metaid="_57e43951-ed1a-4e31-820d-96d129a5db07" name="Glycerol_2_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H41N2O8PRS" hasOnlySubstanceUnits="true" id="M_tddec2eACP_c" metaid="_59c66f20-37e6-4161-8b60-c809a99967cb" name="trans_Dodec_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H41N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnagln_c" metaid="dfb26a16-0150-4829-98dd-75d71683c2c5" name="tRNA_Gln_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H27FeN3O15" hasOnlySubstanceUnits="true" id="M_feenter_e" metaid="_06f569a1-82b1-43b5-b046-026c0df888af" name="M_feenter_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H27FeN3O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O4S2R4" hasOnlySubstanceUnits="true" id="M_trdox_c" metaid="cf02ed71-77c9-4b39-80b2-51932a2f7eca" name="Oxidized_thioredoxin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N4O4S2R4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14O8P" hasOnlySubstanceUnits="true" id="M_g3pg_p" metaid="e47dbb18-e115-41f7-9384-3cc6a6e3458c" name="Glycerophosphoglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H14O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H29O2" hasOnlySubstanceUnits="true" id="M_hdcea_p" metaid="_90416f38-abc8-4831-829d-60e30cc03e11" name="Hexadecenoate__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H29O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C26H43O25P" hasOnlySubstanceUnits="true" id="M_EPS_XF_e" metaid="_2dac150b-c2bc-4097-92ab-2c0d40f43e0b" name="M_EPS_XF_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C26H43O25P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc2p_e" metaid="e1acabc2-2018-4e6b-97d6-976018236dfe" name="Glycerol_2_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H27FeN3O15" hasOnlySubstanceUnits="true" id="M_feenter_p" metaid="_9c8ce71a-2f18-4327-ad3f-83dd1397a99c" name="M_feenter_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H27FeN3O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H7O3" hasOnlySubstanceUnits="true" id="M_phpyr_c" metaid="a97a873d-235e-43f9-8f4f-ccc996e10f53" name="Phenylpyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H7O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H39N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hdecACP_c" metaid="_7df5fb06-d0db-476d-ab24-9362bd3fbfaf" name="S__3_Hydroxydecanoyl__acyl_carrier_protein" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H39N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C26H43O25P" hasOnlySubstanceUnits="true" id="M_EPS_XF_c" metaid="_4ec00c07-8dd8-42fd-8e51-fae404b3a71b" name="M_EPS_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C26H43O25P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc2p_c" metaid="_88c71068-60b9-4b38-88fe-4ea34f0dac5a" name="Glycerol_2_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H23O2" hasOnlySubstanceUnits="true" id="M_ddca_p" metaid="_4d96532d-03b0-4b58-887f-70241760ab8b" name="Dodecanoate__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H23O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2S" hasOnlySubstanceUnits="true" id="M_hcys_L_c" metaid="_4cf57846-c9a4-42d7-9458-b50552789a85" name="L_Homocysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H14N2O5" hasOnlySubstanceUnits="true" id="M_thymd_c" metaid="_0ae5c203-0786-41f7-9cc0-7b9349cf63a2" name="Thymidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H14N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Cl" hasOnlySubstanceUnits="true" id="M_cl_p" metaid="a85023b1-6044-4628-88e4-6505990be08b" name="Chloride" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cl</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HSR" hasOnlySubstanceUnits="true" id="M_sufse_c" metaid="c65b45a3-b9bd-4356-be1d-95a6ad9649b2" name="M_sufse_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HSR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H4O7P" hasOnlySubstanceUnits="true" id="M_3pg_c" metaid="_7c850fdc-7ee4-4131-8713-1c4e7db33ef9" name="3_Phospho_D_glycerate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H4O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="RH2" hasOnlySubstanceUnits="true" id="M_etfrd_c" metaid="bc7d1494-f2e3-4392-a6b4-20e2abdfe54f" name="Electron_transfer_flavoprotein_reduced" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: RH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H49N2O9PRS" hasOnlySubstanceUnits="true" id="M_3opalmACP_c" metaid="d03ccd95-0ad8-40a6-99ec-cff5d909c168" name="3_Oxohexadecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H49N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H38N7O18P3S" hasOnlySubstanceUnits="true" id="M_r3hbcoa_c" metaid="_7091ffad-7925-4b77-97de-67b2358b790e" name="R__3_Hydroxybutanoyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H38N7O18P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H21N5O14P2" hasOnlySubstanceUnits="true" id="M_adprib_c" metaid="_8447d936-9b96-4794-adad-6e64e8be25e9" name="ADPribose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H21N5O14P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H25N3O17P2" hasOnlySubstanceUnits="true" id="M_uacmam_c" metaid="_87ee04d6-6c04-42fb-99a4-635593f51ae1" name="UDP_N_acetyl_D_mannosamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H25N3O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H20N2O16P2" hasOnlySubstanceUnits="true" id="M_udpxyl_c" metaid="_121290d7-eee1-43b4-9cc3-5cac99592dba" name="UDP_D_xylose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H20N2O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C56H105N2O20P" hasOnlySubstanceUnits="true" id="M_lipidAds_XF_c" metaid="fdd44c49-62fd-40fe-a8f0-de3f2a5cf27f" name="M_lipidAds_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C56H105N2O20P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15NO6" hasOnlySubstanceUnits="true" id="M_acgam_c" metaid="_929cca87-4c08-439f-8e38-8d760db037eb" name="N_Acetyl_D_glucosamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15NO6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H44N6O15" hasOnlySubstanceUnits="true" id="M_anhm4p_c" metaid="_55dc95a9-9c90-4e47-ac05-b51200af8681" name="1_6_anhydrous_N_Acetylmuramyl_tetrapeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H44N6O15</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H8NO2" hasOnlySubstanceUnits="true" id="M_ind3ac_c" metaid="c05f427b-cebf-48fc-881b-2db18a86688c" name="Indole_3_acetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H8NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Cl" hasOnlySubstanceUnits="true" id="M_cl_e" metaid="_8de57525-7850-4331-955a-593d97aa5cd9" name="Chloride" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cl</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8NO7P" hasOnlySubstanceUnits="true" id="M_phthr_c" metaid="_688ae74e-7e6c-444f-8ac7-ef9a56c07efc" name="O_Phospho_4_hydroxy_L_threonine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H8NO7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H41N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hcddec5eACP_c" metaid="e8ad6c5c-ffcf-4c14-bf13-617ce96feeaa" name="R__3_hydroxy_cis_dodec_5_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H41N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H7NO4" hasOnlySubstanceUnits="true" id="M_thdp_c" metaid="_1b78ecb9-a1be-43a5-9061-6b31d460fca8" name="2_3_4_5_Tetrahydrodipicolinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H7NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C73H140O17P2" hasOnlySubstanceUnits="true" id="M_clpn160_p" metaid="be613459-f8dd-4b09-893a-2559577ca2fe" name="cardiolipin__tetrahexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C73H140O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15NO6" hasOnlySubstanceUnits="true" id="M_acgam_p" metaid="ebd83331-b18c-41b4-a44b-059dcf479c03" name="M_acgam_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15NO6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H29N2O8PRS" hasOnlySubstanceUnits="true" id="M_thex2eACP_c" metaid="e378c6d1-fb50-4d2c-be3f-7d9d0026a9d0" name="trans_Hex_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H29N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H41N4O16" hasOnlySubstanceUnits="true" id="M_dscl_c" metaid="ea6c4aa1-cc4d-4ada-87f2-809ebb395fa8" name="dihydrosirohydrochlorin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H41N4O16</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C70H127N2O32P3" hasOnlySubstanceUnits="true" id="M_phhlipidA_XF_c" metaid="c96f56b7-b608-43d3-a6a1-356c9ba4b3e0" name="M_phhlipidA_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C70H127N2O32P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N5O13P2S" hasOnlySubstanceUnits="true" id="M_paps_c" metaid="f209ccf7-0a4e-4739-a0cd-7b1df95736a6" name="3__Phosphoadenylyl_sulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N5O13P2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5O2" hasOnlySubstanceUnits="true" id="M_bz_c" metaid="ae1c7a8d-8097-40e1-8dac-f56ed8b8c459" name="Benzoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O13P3" hasOnlySubstanceUnits="true" id="M_dgtp_c" metaid="_02b8aea4-dd62-45c1-8ee6-2ed83d65c1a7" name="dGTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O13P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H60O5" hasOnlySubstanceUnits="true" id="M_12dgr140_p" metaid="aba63d0f-24a8-409d-850d-51ff5ed4bb19" name="M_12dgr140_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H60O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H10NO6P" hasOnlySubstanceUnits="true" id="M_pdx5p_c" metaid="_8c22f1f8-8834-4467-9706-e5cf85181be4" name="Pyridoxine_5__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H10NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12N5O8P1X" hasOnlySubstanceUnits="true" id="M_moadamp_c" metaid="_1673f815-08ff-48a9-a6c1-7fce124ac8f8" name="MoaD_Protein_with_bound_AMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12N5O8P1X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5O2" hasOnlySubstanceUnits="true" id="M_bz_p" metaid="_4c50d908-be09-41cc-bd87-d9e77149cd86" name="M_bz_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O7P" hasOnlySubstanceUnits="true" id="M_dimp_c" metaid="_4847f1ea-fbe8-46a0-b954-d777099b14f5" name="dIMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_r1p_c" metaid="c51fe663-a96c-4d5f-b044-fd55cadbf789" name="alpha_D_Ribose_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H42N3O18P2" hasOnlySubstanceUnits="true" id="M_u3hga_XF_c" metaid="_8688a4a6-3274-4c07-b155-4025fa339e4e" name="M_u3hga_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H42N3O18P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O10P2" hasOnlySubstanceUnits="true" id="M_adp_c" metaid="_2c5d4c58-1d75-4ae1-885b-ca295055afa8" name="ADP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O10P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5O2" hasOnlySubstanceUnits="true" id="M_bz_e" metaid="_50d58e18-184f-4feb-a6bb-b7f585abcda2" name="M_bz_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C71H113N2O18P2" hasOnlySubstanceUnits="true" id="M_unagamu_c" metaid="_9d0cf216-7876-451e-a63a-64554bdc32c4" name="M_unagamu_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C71H113N2O18P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10NO2S" hasOnlySubstanceUnits="true" id="M_met_D_e" metaid="_0c467055-569b-4120-a154-eb8045b1652b" name="M_met_D_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10NO2S" hasOnlySubstanceUnits="true" id="M_met_D_c" metaid="_4742ba11-749b-45ba-831f-6756fc3f2680" name="M_met_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H21N2O7PS" hasOnlySubstanceUnits="true" id="M_pan4p_c" metaid="b39ca11a-6517-469c-838a-d90ebfc77437" name="Pantetheine_4__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H21N2O7PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O9P" hasOnlySubstanceUnits="true" id="M_ump_c" metaid="_52592ef6-e980-4115-a0ce-3be62c414f22" name="UMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4N4O" hasOnlySubstanceUnits="true" id="M_hxan_p" metaid="_43301271-49c5-439a-b48c-343af7c883ec" name="Hypoxanthine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4N4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H14NO9P" hasOnlySubstanceUnits="true" id="M_acgam1p_c" metaid="ee099462-057f-40f2-9318-435b77e02ac5" name="N_Acetyl_D_glucosamine_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H14NO9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C84H149N2O39P2" hasOnlySubstanceUnits="true" id="M_kdo2lipid4HL_XF_c" metaid="_5f10e95f-0f73-4cb4-86f8-a423a42e26b4" name="M_kdo2lipid4HL_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C84H149N2O39P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnasecys_c" metaid="_43e9e8dc-27a9-45c7-a846-a9806ffc5900" name="tRNA_SeCys_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H22N2O15P2" hasOnlySubstanceUnits="true" id="M_dtdp4d6dg_c" metaid="c3c4a7d9-e30f-4081-a77a-b0f5247d5e59" name="dTDP_4_dehydro_6_deoxy_D_glucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H22N2O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H39N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ocddec5eACP_c" metaid="c3249e6e-3844-464e-912b-eaffa32b9b2e" name="3_oxo_cis_dodec_5_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H39N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H56O3" hasOnlySubstanceUnits="true" id="M_2hpmhobq_c" metaid="e92b21fa-04e6-4466-8e88-54b6da43b2ec" name="2_Hexaprenyl_3_methyl_6_methoxy_1_4_benzoquinone" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H56O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3" hasOnlySubstanceUnits="true" id="M_gln_L_c" metaid="f4a97e17-4cd4-4c44-a820-68d123b6536e" name="L_Glutamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3" hasOnlySubstanceUnits="true" id="M_gln_L_e" metaid="cb3178e8-82df-4bfc-9bd3-2225d4f2deae" name="L_Glutamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33O2" hasOnlySubstanceUnits="true" id="M_ocdcea_e" metaid="c49ceefe-cbb1-4c1f-b2c9-7d2be26c1725" name="octadecenoate__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H33O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H70O10P1" hasOnlySubstanceUnits="true" id="M_pg161_c" metaid="_30287bb9-8205-4e45-936c-6b7ff079fb61" name="Phosphatidylglycerol__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H70O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33O2" hasOnlySubstanceUnits="true" id="M_ocdcea_c" metaid="_80627c1f-2ab2-4b5e-b9ee-f3bace1053ad" name="M_ocdcea_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H33O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HS2R" hasOnlySubstanceUnits="true" id="M_sufsesh_c" metaid="_8a50d7ae-12e1-458b-bca1-41d50528128f" name="M_sufsesh_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HS2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H41O7P1" hasOnlySubstanceUnits="true" id="M_1odecg3p_c" metaid="bc7afb5b-a544-4ac5-b596-28d4f53b5a73" name="1_octadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H41O7P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O10PS" hasOnlySubstanceUnits="true" id="M_aps_c" metaid="e8f644aa-cf4e-4851-9b52-524f55800b88" name="Adenosine_5__phosphosulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O10PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Cl" hasOnlySubstanceUnits="true" id="M_cl_c" metaid="_460e0853-51f1-4911-9939-66ee68043783" name="Chloride" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cl</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Cu" hasOnlySubstanceUnits="true" id="M_cu2_e" metaid="fa22814a-ff48-4484-925b-60b9d589e426" name="Copper_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cu</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10NO2S" hasOnlySubstanceUnits="true" id="M_met_D_p" metaid="_29bc905d-471c-422d-ac52-fb6b64907c9f" name="M_met_D_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Cu" hasOnlySubstanceUnits="true" id="M_cu2_c" metaid="_7f917db6-f623-4384-ae7d-b478ab60e6e9" name="Copper_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cu</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4N4O" hasOnlySubstanceUnits="true" id="M_hxan_c" metaid="d2e6ca98-7ed8-4c5b-9b61-fdd33de2e076" name="Hypoxanthine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4N4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C33H54N7O17P3S" hasOnlySubstanceUnits="true" id="M_ddcacoa_c" metaid="_108bae10-3aa7-4e54-955e-3f76398c8f5c" name="Dodecanoyl_CoA__n_C12_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C33H54N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H70O10P1" hasOnlySubstanceUnits="true" id="M_pg161_p" metaid="_40f2b6ec-e609-48b0-a490-7f91812458f9" name="Phosphatidylglycerol__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H70O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3" hasOnlySubstanceUnits="true" id="M_gln_L_p" metaid="_11575be7-e27d-4ba4-b151-c5045e19fccd" name="L_Glutamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Cu" hasOnlySubstanceUnits="true" id="M_cu2_p" metaid="_4a0f9fdb-ba9d-4617-b1f5-84637d786267" name="Copper_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cu</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H33O2" hasOnlySubstanceUnits="true" id="M_ocdcea_p" metaid="accd4a8b-5987-440e-a077-9adbb463d0ea" name="octadecenoate__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H33O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4N4O" hasOnlySubstanceUnits="true" id="M_hxan_e" metaid="aad41c36-39a2-4627-9de3-54ebb9a099c0" name="Hypoxanthine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4N4O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H55N2O8PRS" hasOnlySubstanceUnits="true" id="M_ocdcaACP_c" metaid="a99cb6e9-3d7b-4418-8e12-3e3eadb5e4ac" name="Octadecanoyl_ACP__n_C18_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H55N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H67N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdtdec7eg_c" metaid="cfed38fb-a6aa-4c04-925b-a8ddecbef47f" name="CDP_1_2_ditetradec_7_enoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C40H67N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H4O7P" hasOnlySubstanceUnits="true" id="M_2pg_c" metaid="e70b8811-d6b0-4409-805b-b6cb4cbcc792" name="D_Glycerate_2_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H4O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H22N2O17P2" hasOnlySubstanceUnits="true" id="M_udpgal_c" metaid="ca9477b5-955c-4986-8dda-a59e550e5e7a" name="UDPgalactose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H22N2O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H29N2O10PRS" hasOnlySubstanceUnits="true" id="M_gmeACP_c" metaid="ddead12e-825c-49d7-aabf-988f35133766" name="Glutaryl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H29N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_inost_p" metaid="bdbe4468-697b-4df1-8745-7da05a39e022" name="myo_Inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H81N1O10P1" hasOnlySubstanceUnits="true" id="M_ps180_c" metaid="_8df23e87-1dbe-4a1a-aad2-a2499978d7bb" name="phosphatidylserine__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H81N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2" hasOnlySubstanceUnits="true" id="M_thym_c" metaid="_78dcf97b-b64a-4383-8155-483beeb01f07" name="Thymine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12NO6P" hasOnlySubstanceUnits="true" id="M_3ig3p_c" metaid="_4794eeab-2b3a-4e86-947e-a3668dd50e19" name="C___3_Indolyl__glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H64N7O17P3S" hasOnlySubstanceUnits="true" id="M_odecoa_c" metaid="_09cf7336-e84b-4f05-badd-7be76bcbabe8" name="Octadecenoyl_CoA__n_C18_1CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H64N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16N3O6S" hasOnlySubstanceUnits="true" id="M_gthrd_c" metaid="_6d318b97-a47e-49aa-87cc-3ad6fb676344" name="Reduced_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H16N3O6S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H4O2S10Fe4R" hasOnlySubstanceUnits="true" id="M_sufbcd_4fe4s_c" metaid="ef85ce8a-599c-49c2-b934-52d0e2f16d6c" name="M_sufbcd_4fe4s_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H4O2S10Fe4R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C68H104N12O38" hasOnlySubstanceUnits="true" id="M_murein3p3p_p" metaid="_9933264b-e15a-4ed1-a4f0-f4fc7c227565" name="two_linked_disacharide_tripeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C68H104N12O38</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H31O7P1" hasOnlySubstanceUnits="true" id="M_1tdec7eg3p_c" metaid="ab977643-263a-4a03-a254-bb852121a6e2" name="1_tetradec_7_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H31O7P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2" hasOnlySubstanceUnits="true" id="M_4abut_e" metaid="_83f27303-75f4-4d6e-8ac2-28eeb19db871" name="4_Aminobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO3" hasOnlySubstanceUnits="true" id="M_5aop_c" metaid="a32ed875-f60f-4312-961c-01fc0b55d16b" name="5_Amino_4_oxopentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2" hasOnlySubstanceUnits="true" id="M_thym_p" metaid="b8c96569-55bb-4c39-bfb6-94c7bdf53eda" name="M_thym_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4O1" hasOnlySubstanceUnits="true" id="M_meoh_e" metaid="a3aecd07-6bf3-464b-8ac1-bdd59da7f49e" name="Methanol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH4O1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4O1" hasOnlySubstanceUnits="true" id="M_meoh_c" metaid="_9890bb12-45ac-4f4d-a19a-fc811557ae3c" name="Methanol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH4O1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O3" hasOnlySubstanceUnits="true" id="M_dad_2_c" metaid="_90683926-b866-41fe-80c1-98babccbacf6" name="Deoxyadenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H78O10P1" hasOnlySubstanceUnits="true" id="M_pg181_c" metaid="_8f92af48-2761-440e-9022-9d3fa1cbc681" name="Phosphatidylglycerol__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H78O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2" hasOnlySubstanceUnits="true" id="M_4abut_c" metaid="b71769b5-a14b-48f8-91d0-88bb3d343059" name="4_Aminobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6N2O2" hasOnlySubstanceUnits="true" id="M_thym_e" metaid="_7f85071a-6a4f-43db-9823-8a031f2c7d41" name="M_thym_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H33N2O11PRS" hasOnlySubstanceUnits="true" id="M_hpmeACP_c" metaid="_94c28444-1421-443a-aba2-0691b5acec37" name="3_Hydroxypimeloyl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H33N2O11PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C74H112N14O39" hasOnlySubstanceUnits="true" id="M_murein4px4p_p" metaid="eeb327c2-4345-4f36-91b1-60518942ab25" name="two_disacharide_linked_murein_units__tetrapeptide_corsslinked_tetrapeptide__A2pm__D_ala___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C74H112N14O39</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2" hasOnlySubstanceUnits="true" id="M_4abut_p" metaid="_7bbf70a8-f779-47ec-a17e-4c489edf91d3" name="4_Aminobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4O1" hasOnlySubstanceUnits="true" id="M_meoh_p" metaid="d5cde6e6-4478-4de3-a0a9-0fef3954603c" name="Methanol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH4O1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H78O10P1" hasOnlySubstanceUnits="true" id="M_pg181_p" metaid="_12290258-af5c-47c1-979d-c45053f67323" name="Phosphatidylglycerol__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H78O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H37N2O8PRS" hasOnlySubstanceUnits="true" id="M_tdec2eACP_c" metaid="b40796b5-d9da-41e2-8108-7ab4fac80089" name="trans_Dec_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H37N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C47H72O2" hasOnlySubstanceUnits="true" id="M_2omph_c" metaid="_50c8fd8a-0b8d-4b9d-9f3f-7e73939896c7" name="2_Octaprenyl_6_methoxyphenol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C47H72O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H33N7O13P2S" hasOnlySubstanceUnits="true" id="M_dpcoa_c" metaid="_2114affe-c062-4904-a403-daf62352e50a" name="Dephospho_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H33N7O13P2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="K" hasOnlySubstanceUnits="true" id="M_k_p" metaid="_215c8043-9dff-438d-a258-cec5f2bc47ac" name="potassium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: K</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5NO4" hasOnlySubstanceUnits="true" id="M_23dhdp_c" metaid="_752884b5-3ccf-4ce5-b928-ef740b225ab0" name="2_3_Dihydrodipicolinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_lcts_p" metaid="f961f514-f854-4ab7-a243-2b378a11a89f" name="M_lcts_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H22O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H15N5O3S" hasOnlySubstanceUnits="true" id="M_5mta_c" metaid="cbac2a4e-49f7-48a8-9add-029ce811ba89" name="5_Methylthioadenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H15N5O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H77O13P2" hasOnlySubstanceUnits="true" id="M_pgp181_c" metaid="_5f9ad7b0-8d3c-43cf-8a33-90e1eb710e57" name="Phosphatidylglycerophosphate__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H77O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H16N4O7P2S" hasOnlySubstanceUnits="true" id="M_thmpp_c" metaid="_30903d62-892f-48e3-a1c0-6b6a72280043" name="Thiamine_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H16N4O7P2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O7P" hasOnlySubstanceUnits="true" id="M_amp_c" metaid="_4fe6c29c-fecf-470c-be2a-a9bcf8656833" name="AMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H60O5" hasOnlySubstanceUnits="true" id="M_12dgr140_c" metaid="_7e1e6be4-b6d5-4044-b0b9-2f04b2bea97a" name="1_2_Diacyl_sn_glycerol__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H60O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2R" hasOnlySubstanceUnits="true" id="M_sertrna_c" metaid="_81f93249-c898-454e-98bd-866ce601f5ba" name="L_Seryl_tRNA_Ser_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H33N9O15P2" hasOnlySubstanceUnits="true" id="M_fadh2_c" metaid="_4041656b-e412-49f4-b816-7600ed0651ee" name="Flavin_adenine_dinucleotide_reduced" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H33N9O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_lcts_c" metaid="_37a5c5d2-2f41-4400-b1e7-bcba04bb38d5" name="M_lcts_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H22O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N5O13P3" hasOnlySubstanceUnits="true" id="M_ahdt_c" metaid="_5035af71-197d-41f9-aa74-443f3358baaf" name="2_Amino_4_hydroxy_6__erythro_1_2_3_trihydroxypropyl_dihydropteridine_triphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N5O13P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O14P3" hasOnlySubstanceUnits="true" id="M_dutp_c" metaid="_80fe83ce-be12-4f96-a6f6-a17511a22de4" name="dUTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H37N2O9PRS" hasOnlySubstanceUnits="true" id="M_3odecACP_c" metaid="a34c0d26-e907-4875-baf3-7229d06e1f16" name="3_Oxodecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H37N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO8P" hasOnlySubstanceUnits="true" id="M_gam6p_c" metaid="f0da3ccb-33da-4fb1-ac90-d48b92df0746" name="D_Glucosamine_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H77O13P2" hasOnlySubstanceUnits="true" id="M_pgp181_p" metaid="af1769b8-8aed-4c2c-a532-e2aab8ffd559" name="Phosphatidylglycerophosphate__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H77O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H21N5O15P2" hasOnlySubstanceUnits="true" id="M_prfp_c" metaid="fa867997-62a0-40f2-99a3-cf71a1fa8319" name="1__5_Phosphoribosyl__5___5_phosphoribosylamino_methylideneamino_imidazole_4_carboxamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H21N5O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O4" hasOnlySubstanceUnits="true" id="M_succ_c" metaid="_474e6990-28d1-4ec8-9f01-356e9e7060cd" name="Succinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO8P" hasOnlySubstanceUnits="true" id="M_g3ps_p" metaid="_4f51406a-ef1b-4d16-9d37-94c2adea606c" name="Glycerophosphoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O4" hasOnlySubstanceUnits="true" id="M_succ_p" metaid="_37f6347d-7051-42e9-a560-40c4bf52c173" name="Succinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_gal_p" metaid="fa6238b5-6319-4f16-8851-65f593e11a36" name="D_Galactose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16N3O6S" hasOnlySubstanceUnits="true" id="M_gthrd_e" metaid="f6eae696-19ab-4dd8-af09-37528a564931" name="Reduced_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H16N3O6S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16N3O6S" hasOnlySubstanceUnits="true" id="M_gthrd_p" metaid="a9635167-b7c7-4115-a2fa-95aa4914a33b" name="Reduced_glutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H16N3O6S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C63H116N2O29P2" hasOnlySubstanceUnits="true" id="M_hlipidA_XF_c" metaid="cde26a11-d4db-4032-a434-28c5ec93113f" name="M_hlipidA_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C63H116N2O29P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H50N7O17P3S" hasOnlySubstanceUnits="true" id="M_dcacoa_c" metaid="_793f8d72-7a4d-47d7-98e2-bcbb112cd0b2" name="Decanoyl_CoA__n_C10_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H50N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_gal_c" metaid="_9ba9d16d-988a-4711-970f-57a94cce6ea5" name="D_Galactose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_gal_e" metaid="_52e47f01-5ef5-4afe-bfda-be27bfeca562" name="D_Galactose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="K" hasOnlySubstanceUnits="true" id="M_k_c" metaid="_232f0d8c-8b0a-4749-a7ca-5d12734bd206" name="potassium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: K</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H5O3" hasOnlySubstanceUnits="true" id="M_2obut_c" metaid="ee189109-cd3b-4543-81a6-b72eefb96c9d" name="2_Oxobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO8P" hasOnlySubstanceUnits="true" id="M_g3ps_c" metaid="_40067cd7-167d-4fba-a233-0883aa18794d" name="Glycerophosphoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H5N3O" hasOnlySubstanceUnits="true" id="M_csn_c" metaid="_0a157836-f6dd-476a-b4fb-6fe5231d5451" name="Cytosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H5N3O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="K" hasOnlySubstanceUnits="true" id="M_k_e" metaid="_806bd4c5-c3bb-413a-bf66-963a22bfb2f4" name="potassium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: K</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO8P" hasOnlySubstanceUnits="true" id="M_g3ps_e" metaid="_9df4095e-2177-43b9-b941-0114c6f850c6" name="Glycerophosphoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O7P2" hasOnlySubstanceUnits="true" id="M_ipdp_c" metaid="_57069a2f-f263-4d87-b32a-03f2a90a3ce3" name="Isopentenyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H23N2O8PRS" hasOnlySubstanceUnits="true" id="M_acACP_c" metaid="_7a08b1a3-ec7b-4b70-acd9-8907b1ab9e9f" name="Acetyl_ACP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C13H23N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C111H167N21O58" hasOnlySubstanceUnits="true" id="M_murein4px4px4p_p" metaid="_7034283c-795d-4c7c-8dd9-c73ebfa3af89" name="three_disacharide_linked_murein_units__tetrapeptide_crosslinked_tetrapeptide__A2pm__D_ala____tetrapeptide_corsslinked_tetrapeptide__A2pm__D_ala____middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C111H167N21O58</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C49H54FeN4O6" hasOnlySubstanceUnits="true" id="M_hemeA_1_c" metaid="_8dafc607-8c60-4144-bb61-e69d7933af41" name="M_hemeA_1_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C49H54FeN4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3" hasOnlySubstanceUnits="true" id="M_glyald_c" metaid="_99315983-b783-4d15-a64c-bb7c50508372" name="D_Glyceraldehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O5" hasOnlySubstanceUnits="true" id="M_mal_D_e" metaid="_3f836984-888d-442d-a80d-124ea9653d5e" name="M_mal_D_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3" hasOnlySubstanceUnits="true" id="M_glyald_e" metaid="_52131b8a-027f-4a1b-b1dc-4307a0d9d7c4" name="M_glyald_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="HCO3" hasOnlySubstanceUnits="true" id="M_hco3_p" metaid="_73857529-3fa7-459d-b32c-74dc47eeba72" name="M_hco3_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HCO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O5" hasOnlySubstanceUnits="true" id="M_mal_D_p" metaid="b66491f9-b558-456f-84fe-f45205b1a417" name="M_mal_D_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H16N3O6SSe" hasOnlySubstanceUnits="true" id="M_gslnt_c" metaid="f5b6bdf7-9148-4ce7-bd50-24127c890289" name="M_gslnt_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H16N3O6SSe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5N5O" hasOnlySubstanceUnits="true" id="M_preq0_c" metaid="b309cee8-6e97-4114-96bd-93c5d0ba25cb" name="7_cyano_7_carbaguanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5N5O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O5" hasOnlySubstanceUnits="true" id="M_mal_D_c" metaid="_458861eb-3197-4592-90fe-ca6bd9aa0f88" name="M_mal_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O9P" hasOnlySubstanceUnits="true" id="M_6pgl_c" metaid="ee88dbde-4073-4637-b00b-0767b52d584b" name="6_phospho_D_glucono_1_5_lactone" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H3O6" hasOnlySubstanceUnits="true" id="M_acon_C_c" metaid="_983551f4-31f2-4080-ae0b-846e98ef4a74" name="cis_Aconitate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H3O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_R_L_c" metaid="ed0f82b6-0a1a-4986-a913-e2835731af7d" name="L_methionine_R_sulfoxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8N2O2R" hasOnlySubstanceUnits="true" id="M_asntrna_c" metaid="ee82cb7d-b294-4e8f-bcbd-9d89b010173f" name="L_Asparaginyl_tRNA_Asn_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H8N2O2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_R_L_e" metaid="d6df6cfa-f5fd-4e6a-bb9f-54c0f495e3fd" name="M_metsox_R_L_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H18N4O6" hasOnlySubstanceUnits="true" id="M_dmlz_c" metaid="cb34b92e-e342-4791-b821-d9e212d8605d" name="6_7_Dimethyl_8__1_D_ribityl_lumazine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C13H18N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Zn" hasOnlySubstanceUnits="true" id="M_zn2_e" metaid="_4a556ba2-0ee3-43e7-a4f8-7546de1ffafa" name="Zinc" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Zn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H7O4" hasOnlySubstanceUnits="true" id="M_34hpp_c" metaid="c9300efc-7e75-456f-b6a3-aea4c65b139d" name="3__4_Hydroxyphenyl_pyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H7O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="RCu11" hasOnlySubstanceUnits="true" id="M_11cu2s_CopA_p" metaid="_997bc6c2-f19f-44e1-b525-322eb1f375bb" name="Protein_CopA_bounded_to_11_atoms_of_copper" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: RCu11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Zn" hasOnlySubstanceUnits="true" id="M_zn2_c" metaid="_1fb155a7-e27d-4f0f-8fb7-10e208dcab56" name="Zinc" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Zn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H12NO6" hasOnlySubstanceUnits="true" id="M_suchms_c" metaid="_3f394db0-1c6a-4775-9589-e5b9a86fe816" name="M_suchms_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H12NO6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Zn" hasOnlySubstanceUnits="true" id="M_zn2_p" metaid="_3f542a6b-e6f5-429b-a313-c9d62a9fe0c9" name="Zinc" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Zn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H7N2O5P" hasOnlySubstanceUnits="true" id="M_imacp_c" metaid="aabf93be-f89c-4836-a9ec-ea62f62bbbc9" name="3__Imidazol_4_yl__2_oxopropyl_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H7N2O5P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" hasOnlySubstanceUnits="true" id="M_na1_e" metaid="_83d73a25-8317-4dca-910b-370f23535b9c" name="Sodium" sboTerm="SBO:0000240"/> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7N4O4" hasOnlySubstanceUnits="true" id="M_alltt_c" metaid="eee9822b-fa76-413e-9f94-233797c284c6" name="Allantoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="true" id="M_na1_c" metaid="_4c0b1829-431b-453e-a0be-2f3caf81bfe3" name="Sodium" sboTerm="SBO:0000240"/> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13O8" hasOnlySubstanceUnits="true" id="M_kdo_c" metaid="_83255d96-44c0-4eac-9047-d321d1883508" name="3_Deoxy_D_manno_2_octulosonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H13O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO4" hasOnlySubstanceUnits="true" id="M_4hthr_c" metaid="_2f970658-3405-49d2-827e-cda31ac3c580" name="M_4hthr_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H37O7P" hasOnlySubstanceUnits="true" id="M_1hdecg3p_c" metaid="e94be5d7-f496-4f2a-8593-3bcfc9c2d1ce" name="1_hexadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H37O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" hasOnlySubstanceUnits="true" id="M_na1_p" metaid="_67530b6e-a8f1-458c-b939-90f3fc424138" name="Sodium" sboTerm="SBO:0000240"/> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H41N2O8PRS" hasOnlySubstanceUnits="true" id="M_cddec5eACP_c" metaid="_7d9bf15a-c064-4218-a701-d71b4206b45f" name="cis_dodec_5_enoyl__acyl_carrier_protein___n_C12_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H41N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H15NO8P" hasOnlySubstanceUnits="true" id="M_4ppan_c" metaid="_32fb951f-9d39-48a0-bf99-b42cd73fcf37" name="D_4__Phosphopantothenate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H15NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H18N2O16P2" hasOnlySubstanceUnits="true" id="M_udp4kp_c" metaid="_267c7469-631b-4806-b114-f73873b2ca8f" name="UDP_4_keto_pentose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H18N2O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12NO8" hasOnlySubstanceUnits="true" id="M_sl2a6o_c" metaid="c53714e9-99bf-443b-a309-9745c89bcdac" name="N_Succinyl_2_L_amino_6_oxoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12NO8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O7P" hasOnlySubstanceUnits="true" id="M_dgmp_c" metaid="_88eff2be-703f-4c42-9026-2053283954d6" name="dGMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_R_L_p" metaid="_1a7ecca6-839c-43db-a508-6bb4abbdeec9" name="M_metsox_R_L_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H76O5" hasOnlySubstanceUnits="true" id="M_12dgr180_c" metaid="_912e1495-951c-4316-88ef-1f633ce29a60" name="1_2_Diacyl_sn_glycerol__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H76O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H16N4O6" hasOnlySubstanceUnits="true" id="M_4r5au_c" metaid="f669c91e-8061-44ca-aa0c-0aa962f5d915" name="4__1_D_Ribitylamino__5_aminouracil" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H16N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NOR" hasOnlySubstanceUnits="true" id="M_iletrna_c" metaid="_6b19678e-6701-474f-9abc-29755a992a42" name="L_Isoleucyl_tRNA_Ile_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H35N7O19P3S" hasOnlySubstanceUnits="true" id="M_succoa_c" metaid="_09209ea9-8108-4d26-8459-40fe64cf3fb6" name="Succinyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H35N7O19P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H76O5" hasOnlySubstanceUnits="true" id="M_12dgr180_p" metaid="_00a128f5-2674-4f2d-8a4c-aeb6c8a5bc36" name="M_12dgr180_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H76O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_inost_e" metaid="_75ad0a0a-5032-4e7e-bb14-0333fceb16a6" name="myo_Inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H24N10O22P5" hasOnlySubstanceUnits="true" id="M_ap5a_c" metaid="_84f0382a-a19e-4f6c-9e95-ad5376ac7502" name="P1_P5_Bis_5__adenosyl__pentaphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H24N10O22P5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_inost_c" metaid="de6efc63-7434-4c4c-ae58-746a80de0478" name="myo_Inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H43N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hddecACP_c" metaid="_80a29bd8-d2b9-471b-bb2b-956596ab1831" name="R__3_Hydroxydodecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H43N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H24N7O6" hasOnlySubstanceUnits="true" id="M_5mthf_c" metaid="d2df0672-3e3e-4352-aada-dde3e5ab2c86" name="5_Methyltetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H24N7O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3" hasOnlySubstanceUnits="true" id="M_glyald_p" metaid="_61ea2ba8-0f32-4126-96e8-4b79cae44de2" name="M_glyald_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HCO3" hasOnlySubstanceUnits="true" id="M_hco3_c" metaid="f323515f-6b4d-4f7b-9856-3eefd33b670e" name="Bicarbonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HCO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O8P" hasOnlySubstanceUnits="true" id="M_gar_c" metaid="fd54baee-ee54-4189-b660-6d95f5456c1b" name="N1__5_Phospho_D_ribosyl_glycinamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="HCO3" hasOnlySubstanceUnits="true" id="M_hco3_e" metaid="_61d939b1-ed1f-43ce-9e03-a4c08e8bc887" name="M_hco3_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HCO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H27N2O9PRS" hasOnlySubstanceUnits="true" id="M_3haACP_c" metaid="_033de923-3d72-446f-8bf6-1ceeaf457028" name="3R__3_Hydroxyacyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H27N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O3" hasOnlySubstanceUnits="true" id="M_dha_c" metaid="a0bfad08-cbfb-4f6d-806f-0f4ff1765afa" name="M_dha_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12O6" hasOnlySubstanceUnits="true" id="M_quin_e" metaid="bd99a476-4b2e-4522-a3e4-6f25d1489e01" name="M_quin_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4" hasOnlySubstanceUnits="true" id="M_adn_p" metaid="_7d39ad76-0d65-4592-89a3-0c21f052f029" name="Adenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4N2O" hasOnlySubstanceUnits="true" id="M_urea_c" metaid="_77223863-1562-4b4d-8f6e-dd771c950861" name="Urea" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH4N2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H21N2O2" hasOnlySubstanceUnits="true" id="M_dann_c" metaid="_2352f11e-ba6f-4ddd-a073-d343b40a6112" name="7_8_Diaminononanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H21N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3" hasOnlySubstanceUnits="true" id="M_ser_D_c" metaid="aeb53456-a522-4845-a201-588cd0c2e42a" name="D_Serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C44H75N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdhdec9eg_c" metaid="_43d30dbe-5f11-4ef3-953f-e8f9ea4f67b2" name="CDP_1_2_dihexadec_9_enoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C44H75N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12O6" hasOnlySubstanceUnits="true" id="M_quin_p" metaid="_8fc5fa9f-9288-4b97-99a7-dff2a6505342" name="M_quin_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H16N2O7" hasOnlySubstanceUnits="true" id="M_sl26da_c" metaid="_41ef3c64-c064-4cd4-92ed-418079560801" name="N_Succinyl_LL_2_6_diaminoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H16N2O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O3S" hasOnlySubstanceUnits="true" id="M_dhmtp_c" metaid="ac881e6e-fec6-4756-b044-e561c508a25e" name="M_dhmtp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H68O5" hasOnlySubstanceUnits="true" id="M_12dgr160_c" metaid="_0afbc90f-9b1c-452c-8ad7-a4429280ce87" name="1_2_Diacyl_sn_glycerol__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H68O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_S_L_c" metaid="_16643f8f-c679-4729-9aa3-9f1f5f62564f" name="L_Methionine_Sulfoxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O4" hasOnlySubstanceUnits="true" id="M_23dhmp_c" metaid="c4a26a7f-7396-4c9b-b382-953bea50f73f" name="R__2_3_Dihydroxy_3_methylpentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_S_L_e" metaid="_49986ea5-6b53-4473-b693-50ce26c6e9e8" name="M_metsox_S_L_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="CH4N2O" hasOnlySubstanceUnits="true" id="M_urea_p" metaid="_43c3bda0-062b-47b6-a12b-f30f608bbe0d" name="Urea" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH4N2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H55O8P1" hasOnlySubstanceUnits="true" id="M_pa141_c" metaid="c188f9da-a9ab-4218-9ddf-0a1bf83e6f7c" name="1_2_ditetradec_7_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H55O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO3R" hasOnlySubstanceUnits="true" id="M_asptrna_c" metaid="_1bc00e1f-f2fd-4a62-9bba-e097ba867cb0" name="L_Aspartyl_tRNA_Asp_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6NO3R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H7O3" hasOnlySubstanceUnits="true" id="M_3mob_c" metaid="_026bee60-b896-4ae9-ac99-18069021688d" name="3_Methyl_2_oxobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H7O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N5O7P" hasOnlySubstanceUnits="true" id="M_dhpmp_c" metaid="f228857b-3f2f-4b3f-83ca-0044dd00329f" name="M_dhpmp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N5O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H25N5O16P2" hasOnlySubstanceUnits="true" id="M_adphep_LD_c" metaid="_043aff48-157c-40a7-820d-8b79c5d4c269" name="ADP_L_glycero_D_manno_heptose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H25N5O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H27O2" hasOnlySubstanceUnits="true" id="M_ttdca_c" metaid="_8193484f-1f9f-4cde-8c77-a264ef32b72c" name="tetradecanoate__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H27O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_xylu_L_c" metaid="_9ea7f04a-68b4-4f04-b027-8a9a1d987e35" name="M_xylu_L_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H27O2" hasOnlySubstanceUnits="true" id="M_ttdca_e" metaid="_85bf543c-dbf3-40b8-aec0-f8867d1a9759" name="tetradecanoate__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H27O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H55O8P1" hasOnlySubstanceUnits="true" id="M_pa141_p" metaid="f110f5d8-f27b-4fb9-86de-ac4db73ccf6d" name="1_2_ditetradec_7_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H55O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H62N7O17P3S" hasOnlySubstanceUnits="true" id="M_pmtcoa_c" metaid="a2492e1d-7658-447e-bc3f-6f124b6498ca" name="Palmitoyl_CoA__n_C16_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H62N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H39N2O8PRS" hasOnlySubstanceUnits="true" id="M_dcaACP_c" metaid="_39d6026b-bd6c-43e1-819e-3e37a4d38279" name="Decanoyl_ACP__n_C10_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H39N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4" hasOnlySubstanceUnits="true" id="M_adn_e" metaid="_06681255-ca55-4d6e-a318-5146048fe430" name="Adenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H45N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hcmrs7eACP_c" metaid="_991b9738-33dd-4908-9225-f410485a340b" name="R__3_hydroxy_cis_myristol_7_eoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H45N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O4" hasOnlySubstanceUnits="true" id="M_2dhp_c" metaid="_35e85121-8948-4271-b5da-3a8ee3131c50" name="2_Dehydropantoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4" hasOnlySubstanceUnits="true" id="M_adn_c" metaid="_7ee4933b-44b9-4ef3-b32f-6eb2879a4af8" name="Adenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12O6" hasOnlySubstanceUnits="true" id="M_quin_c" metaid="_0f6f353d-ba4b-494d-90c0-1ed3ad6ee4e1" name="M_quin_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H6O" hasOnlySubstanceUnits="true" id="M_etoh_c" metaid="e47016c7-19a2-4935-ab82-c5eb220b89d0" name="Ethanol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H6O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2" hasOnlySubstanceUnits="true" id="M_val_L_p" metaid="d9887695-6657-4c5f-bb99-08f7125c9e82" name="L_Valine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C46H70O" hasOnlySubstanceUnits="true" id="M_2oph_c" metaid="d49cb102-3bd8-47e0-bf24-9cfa84e5179e" name="2_Octaprenylphenol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C46H70O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2" hasOnlySubstanceUnits="true" id="M_val_L_c" metaid="e438fed2-aa4e-4393-abde-490c77c49a61" name="L_Valine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3O" hasOnlySubstanceUnits="true" id="M_4ahmmp_c" metaid="ce138066-f4d6-4c15-9b02-8caddd0dff9e" name="4_Amino_5_hydroxymethyl_2_methylpyrimidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N3O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2" hasOnlySubstanceUnits="true" id="M_val_L_e" metaid="_46ca55d5-b6be-4c78-9219-c02c32c4dc16" name="L_Valine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_fuc_L_e" metaid="e73d084e-64bf-40b1-b7b4-945299e2f7c9" name="M_fuc_L_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H26N7O14P2" hasOnlySubstanceUnits="true" id="M_nad_c" metaid="bb1b199e-2969-485a-a88c-1ec5f0179d20" name="Nicotinamide_adenine_dinucleotide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H26N7O14P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O5" hasOnlySubstanceUnits="true" id="M_fuc_L_c" metaid="_355a215d-4db8-4832-8fb8-ca1ab01f0eda" name="M_fuc_L_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="AsO3" hasOnlySubstanceUnits="true" id="M_aso3_c" metaid="_5453d5d0-a66b-49bb-b42a-eabca45bc40c" name="Arsenite" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: AsO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8O9P" hasOnlySubstanceUnits="true" id="M_2ddg6p_c" metaid="_114fd6c5-31ba-4155-b85e-21f7a01dd1c9" name="M_2ddg6p_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C77H119N15O41" hasOnlySubstanceUnits="true" id="M_murein5p4p_p" metaid="_9dc1160f-ee56-4e10-a93c-c065af2fb172" name="two_linked_disacharide_pentapeptide_and_tetrapeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C77H119N15O41</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H27O2" hasOnlySubstanceUnits="true" id="M_ttdca_p" metaid="f632defc-455c-460e-8b73-ffab54254999" name="tetradecanoate__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H27O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O7" hasOnlySubstanceUnits="true" id="M_5dglcn_c" metaid="d17cd973-347c-4f92-808f-f3db2829a900" name="5_Dehydro_D_gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C81H156O17P2" hasOnlySubstanceUnits="true" id="M_clpn180_p" metaid="_070e315e-74cc-433c-867e-b5840ddb5f12" name="cardiolipin__tetraoctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C81H156O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H10O5" hasOnlySubstanceUnits="true" id="M_3c2hmp_c" metaid="_177a430c-8868-472c-893e-1beb2488d67f" name="3_Carboxy_2_hydroxy_4_methylpentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H22N3O15P2" hasOnlySubstanceUnits="true" id="M_udpLa4n_c" metaid="ce336872-4e86-448f-8eff-547a30ec3470" name="M_udpLa4n_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H22N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO3S" hasOnlySubstanceUnits="true" id="M_metsox_S_L_p" metaid="fa47220e-2432-42c1-9b38-149e2ebb40e0" name="M_metsox_S_L_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H68O5" hasOnlySubstanceUnits="true" id="M_12dgr160_p" metaid="e162bccf-b25d-40c0-b12e-e97ff2edd2ff" name="M_12dgr160_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H68O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H53NO12P" hasOnlySubstanceUnits="true" id="M_lipidX_XF_c" metaid="b1c41bb2-0646-4bcc-9e04-a1133485d7d4" name="M_lipidX_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C28H53NO12P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H36N2O11" hasOnlySubstanceUnits="true" id="M_novbcn_e" metaid="_47801743-fdfb-408d-a8a7-9787d1283699" name="novobiocin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H36N2O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N3O9P" hasOnlySubstanceUnits="true" id="M_5caiz_c" metaid="_6c9e98ef-7d1e-44ce-b4a9-42c3263c2ab8" name="5_phosphoribosyl_5_carboxyaminoimidazole" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N3O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H6O" hasOnlySubstanceUnits="true" id="M_etoh_p" metaid="_83b31a68-c565-4434-910e-c0c6359fff49" name="M_etoh_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H6O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H49N2O8PRS" hasOnlySubstanceUnits="true" id="M_tpalm2eACP_c" metaid="_22e5a1e3-e9c3-4ff0-90da-9ab71904dc41" name="trans_Hexadec_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H49N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8N2O4" hasOnlySubstanceUnits="true" id="M_forglu_c" metaid="e0b032b0-6ff3-46ef-b5ab-71288f24bc8d" name="N_Formimidoyl_L_glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12N2O3" hasOnlySubstanceUnits="true" id="M_progly_c" metaid="_691ebdf0-21c6-4598-a1ad-36baaae52159" name="M_progly_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H12N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H22N3O18P2" hasOnlySubstanceUnits="true" id="M_uacmamu_c" metaid="a6428724-467c-4601-8651-14050b290d18" name="UDP_N_acetyl_D_mannosaminouronate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H22N3O18P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO7P" hasOnlySubstanceUnits="true" id="M_pram_c" metaid="_85c62393-413d-4893-8c01-3c328c75978f" name="5_Phospho_beta_D_ribosylamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H43N3O19P2" hasOnlySubstanceUnits="true" id="M_u3aga_XF_c" metaid="bdcddf87-891e-48b4-ada6-61140f93ac48" name="M_u3aga_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H43N3O19P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H36N2O11" hasOnlySubstanceUnits="true" id="M_novbcn_p" metaid="_352b1076-1234-4942-9297-1cd9f37bc16d" name="novobiocin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H36N2O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H14N4O4S2R4" hasOnlySubstanceUnits="true" id="M_trdrd_c" metaid="c0f2e38a-aeaf-4c60-9faa-7d994d090104" name="Reduced_thioredoxin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H14N4O4S2R4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N3OR" hasOnlySubstanceUnits="true" id="M_histrna_c" metaid="_46576463-2ab2-47d6-bc19-ece0396b696e" name="L_Histidyl_tRNA_His_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N3OR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H24N2O15P2" hasOnlySubstanceUnits="true" id="M_dtdprmn_c" metaid="_7248c5f2-5536-4fa6-8885-a1f09fd313f4" name="dTDP_L_rhamnose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H24N2O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO2" hasOnlySubstanceUnits="true" id="M_pro_L_e" metaid="e5935128-9d10-4545-bc60-df7762d32050" name="L_Proline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO2" hasOnlySubstanceUnits="true" id="M_pro_L_c" metaid="_60cffd2a-0723-46c3-b847-76149ed8ba06" name="L_Proline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O6" hasOnlySubstanceUnits="true" id="M_2ddglcn_c" metaid="_0c68e62b-a2ad-4ab3-a62d-59eea5cf7389" name="2_Dehydro_3_deoxy_D_gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H71N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdtdecg_c" metaid="d172f13d-c895-4c2c-b6e8-bbe229008d13" name="CDP_1_2_ditetradecanoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C40H71N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N5O17P4" hasOnlySubstanceUnits="true" id="M_ppgpp_c" metaid="fbbed2b2-bc7f-463e-8a61-dedfb2f17969" name="Guanosine_3__5__bis_diphosphate_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N5O17P4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N3O5" hasOnlySubstanceUnits="true" id="M_cytd_c" metaid="d7071268-659c-44cc-9d26-6f94bc593872" name="Cytidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N3O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_ara5p_c" metaid="e94b938e-eac2-49a5-b775-b6b2ada4953a" name="D_Arabinose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O10P2" hasOnlySubstanceUnits="true" id="M_dgdp_c" metaid="f40b6e12-896e-42da-ad86-290ed78876b0" name="dGDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O10P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="R" hasOnlySubstanceUnits="true" id="M_etfox_c" metaid="_1d6c03df-9b36-4f17-99aa-1b3c105d8f19" name="Electron_transfer_flavoprotein_oxidized" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H35N2O8PRS" hasOnlySubstanceUnits="true" id="M_ocACP_c" metaid="a12506fc-a8d8-4489-83e9-6eca6690bad8" name="Octanoyl_ACP__n_C8_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H35N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO2" hasOnlySubstanceUnits="true" id="M_pro_L_p" metaid="_3aa4181e-df32-468a-996f-8ee889f22e76" name="L_Proline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H14N5O11P" hasOnlySubstanceUnits="true" id="M_dcamp_c" metaid="_3e36d473-0360-46f6-bea3-6e69921f5b5d" name="N6__1_2_Dicarboxyethyl__AMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H14N5O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H8O6" hasOnlySubstanceUnits="true" id="M_chor_c" metaid="_861501cd-bfaf-4379-af20-55f06b55f048" name="chorismate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H8O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H17NO11P" hasOnlySubstanceUnits="true" id="M_acmum6p_c" metaid="a7f2ca1c-7335-40a7-a4c9-40213dffd6c9" name="N_acetylmuramate_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H17NO11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H5O3" hasOnlySubstanceUnits="true" id="M_sucsal_c" metaid="_5bb109ef-224e-4128-9d2a-82069c112e24" name="Succinic_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12N2O3" hasOnlySubstanceUnits="true" id="M_alaala_p" metaid="_2b110650-1ab5-4691-97e0-2452fdb6ee7f" name="D_Alanyl_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N5O4" hasOnlySubstanceUnits="true" id="M_dhmpt_c" metaid="_9d286888-17b3-45e3-8d35-29df68cb72e1" name="M_dhmpt_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="P2HO7" hasOnlySubstanceUnits="true" id="M_ppi_c" metaid="_86a426b1-c2d9-4c3c-93bc-3c02dc0df33f" name="Diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: P2HO7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8N2O3" hasOnlySubstanceUnits="true" id="M_asn_L_c" metaid="b6b0aa02-7dd9-4612-be46-f310627219fa" name="L_Asparagine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H8N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H10O10P" hasOnlySubstanceUnits="true" id="M_2dda7p_c" metaid="_3886d780-2882-46ea-a946-49d3ccb7923c" name="2_Dehydro_3_deoxy_D_arabino_heptonate_7_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H10O10P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H16N4" hasOnlySubstanceUnits="true" id="M_agm_p" metaid="_441bd501-469e-41d8-b5ad-a13ace02d988" name="M_agm_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H16N4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Co" hasOnlySubstanceUnits="true" id="M_cobalt2_c" metaid="_21744346-1c03-4851-8278-ffdcbdc40d47" name="Cobalt_Co2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Co</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H33O7P" hasOnlySubstanceUnits="true" id="M_1tdecg3p_c" metaid="_3b77a3b0-f42e-4935-b884-401ffdffec0a" name="1_tetradecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H33O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Co" hasOnlySubstanceUnits="true" id="M_cobalt2_e" metaid="f70b5bb1-2240-48c1-a529-dd502abf1328" name="Cobalt_Co2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Co</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12N2O3" hasOnlySubstanceUnits="true" id="M_alaala_c" metaid="_9f439b98-142d-4805-8d78-4ff57bfc2251" name="D_Alanyl_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Co" hasOnlySubstanceUnits="true" id="M_cobalt2_p" metaid="_374b1ce7-42eb-4fc3-a848-cd0b91f8727f" name="Cobalt_Co2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Co</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H51N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hpalmACP_c" metaid="_591f9614-19ff-4312-b06f-e9a075408c77" name="R_3_hydroxypalmitoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H51N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C36H40N4O8" hasOnlySubstanceUnits="true" id="M_cpppg3_c" metaid="a0e3b7c5-adee-4995-8dcd-0f8e09571690" name="Coproporphyrinogen_III" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C36H40N4O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N4O9P" hasOnlySubstanceUnits="true" id="M_5apru_c" metaid="_88bc271c-57ea-4ef6-b7fa-972715ec43f4" name="5_Amino_6__5__phosphoribosylamino_uracil" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H27N2O8PRS" hasOnlySubstanceUnits="true" id="M_butACP_c" metaid="_17ce6730-5fbe-4b03-91a1-82b6ca8b65d1" name="Butyryl_ACP__n_C4_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H27N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7O2" hasOnlySubstanceUnits="true" id="M_pac_c" metaid="d0773256-1447-4dbc-aaf0-41ad8a833922" name="Phenylacetic_acid" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H7O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H8O6" hasOnlySubstanceUnits="true" id="M_pphn_c" metaid="eac503bd-6aef-46b3-9533-9b26f1f8c190" name="Prephenate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H8O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaile_c" metaid="e4d6442b-ae1e-436b-8f82-0baeedc19d5d" name="tRNA_Ile_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C48H87N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdodecg_c" metaid="_81e152a5-a783-4702-8f88-e73bf5766026" name="CDP_1_2_dioctadecanoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C48H87N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5NO3" hasOnlySubstanceUnits="true" id="M_2amsa_c" metaid="_207bcba1-43b4-459f-a665-42b837a9ff00" name="2_Aminomalonate_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O2" hasOnlySubstanceUnits="true" id="M_h2o2_p" metaid="_42b77eb6-d10c-45a7-ac8c-1518b2ee7787" name="Hydrogen_peroxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2S" hasOnlySubstanceUnits="true" id="M_met_L_e" metaid="_26554b8f-fc5f-42e3-a5a2-22d5acae17b6" name="L_Methionine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2S" hasOnlySubstanceUnits="true" id="M_met_L_c" metaid="a5c2ad58-768a-4217-812c-eb0b377dc6d2" name="L_Methionine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H17NO3" hasOnlySubstanceUnits="true" id="M_8aonn_c" metaid="_5e5dd73e-e9b3-4ad5-97e3-36dbba07eac7" name="8_Amino_7_oxononanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H17NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H60N7O17P3S" hasOnlySubstanceUnits="true" id="M_hdcoa_c" metaid="ab7c9567-6b41-46ec-8ca0-9208c5931875" name="Hexadecenoyl_CoA__n_C16_1CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H60N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O2" hasOnlySubstanceUnits="true" id="M_h2o2_e" metaid="_5cddf336-5581-454d-a420-15eb05f6f669" name="Hydrogen_peroxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9N5O2" hasOnlySubstanceUnits="true" id="M_6hmhpt_c" metaid="_099a49ea-bc36-4aa8-8ea5-7a5fc7abdd76" name="6_hydroxymethyl_dihydropterin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H9N5O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2O2" hasOnlySubstanceUnits="true" id="M_h2o2_c" metaid="d3edff3f-0965-4524-988e-e012dd269a53" name="Hydrogen_peroxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H16N4" hasOnlySubstanceUnits="true" id="M_agm_c" metaid="e5d12b90-0e92-4296-99a1-4fa488158079" name="Agmatine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H16N4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H19N7O6" hasOnlySubstanceUnits="true" id="M_dhf_c" metaid="_0cdde813-73c0-4312-a5ac-3270f214d9dd" name="7_8_Dihydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H19N7O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H61N1O10P1" hasOnlySubstanceUnits="true" id="M_ps141_c" metaid="d979247f-71a8-407d-bc8e-9683a02c94fb" name="phosphatidylserine__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H61N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N2O4" hasOnlySubstanceUnits="true" id="M_ppbng_c" metaid="_59903941-7a27-49b5-a881-95339159efd4" name="Porphobilinogen" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Cu" hasOnlySubstanceUnits="true" id="M_cu_p" metaid="e8bcc9b6-666f-4fc5-85b6-a38ecd155920" name="Copper_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Cu</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H28N3O19P2" hasOnlySubstanceUnits="true" id="M_uamr_c" metaid="_7aedc4d6-d209-4d7a-9c88-bdf456a7a1a8" name="UDP_N_acetylmuramate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H28N3O19P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H21N5O15P2" hasOnlySubstanceUnits="true" id="M_prlp_c" metaid="b905b0c2-fac2-411a-a2bf-d1590df284b5" name="5___5_phospho_1_deoxyribulos_1_ylamino_methylideneamino__1__5_phosphoribosyl_imidazole_4_carboxamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H21N5O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C32H38N7O19P3S" hasOnlySubstanceUnits="true" id="M_14dhncoa_c" metaid="_68633470-e8bf-451e-8dfd-33ed36f1747c" name="M_14dhncoa_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C32H38N7O19P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_rib_D_p" metaid="_9b4632b8-c810-4aa9-bcef-4dd8c6dac22a" name="M_rib_D_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H1O10P3" hasOnlySubstanceUnits="true" id="M_pppi_c" metaid="_20ac260f-64a1-48ce-95b8-612167d825e9" name="Inorganic_triphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H1O10P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C49H74O4" hasOnlySubstanceUnits="true" id="M_q8_c" metaid="_713ced97-3ec8-4988-9d3e-4b6f02e22aeb" name="Ubiquinone_8" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C49H74O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_rib_D_c" metaid="b609e0d5-8769-49ee-af1c-6bd774cc1742" name="D_Ribose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_rib_D_e" metaid="_7fe4e843-8b2e-4a79-9c69-113790e3fbd3" name="M_rib_D_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H33N4O20P2" hasOnlySubstanceUnits="true" id="M_uama_c" metaid="e88b32e9-3ab7-4339-9dac-ee5d6103e7bd" name="UDP_N_acetylmuramoyl_L_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H33N4O20P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8O5" hasOnlySubstanceUnits="true" id="M_dkdepiins_c" metaid="_57aa188e-b0ff-4aa5-bf0a-0f5ade5ba851" name="D_2_3_diketo_4_deoxy_epi_inositol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9NO5" hasOnlySubstanceUnits="true" id="M_acglu_c" metaid="_71143921-2770-4402-81e5-ab47f3ce3c7c" name="N_Acetyl_L_glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H9NO5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C74H112N14O39" hasOnlySubstanceUnits="true" id="M_murein5px3p_p" metaid="_9398569c-4242-4675-8c1e-cf6e06b7b4d5" name="two_disacharide_linked_murein_units__pentapeptide_corsslinked_tripeptide__A2pm__A2pm___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C74H112N14O39</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H35O2" hasOnlySubstanceUnits="true" id="M_ocdca_p" metaid="_4270b066-041a-4f59-8667-d54dd587d40e" name="octadecanoate__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H35O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H16N2" hasOnlySubstanceUnits="true" id="M_15dap_c" metaid="_39242362-797d-43b7-9196-266844627539" name="1_5_Diaminopentane" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H16N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H10NO5" hasOnlySubstanceUnits="true" id="M_4adcho_c" metaid="dfc3c1be-3f1c-46e7-baae-871822414165" name="4_amino_4_deoxychorismate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H10NO5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H35O2" hasOnlySubstanceUnits="true" id="M_ocdca_c" metaid="_013a03d1-ca68-44fd-a28c-d3e27ab6b81b" name="octadecanoate__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H35O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O8P" hasOnlySubstanceUnits="true" id="M_dump_c" metaid="_90502e6c-c63e-4585-872c-71a131527779" name="dUMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H35O2" hasOnlySubstanceUnits="true" id="M_ocdca_e" metaid="_01d7b1e3-4e48-4381-aa07-2bfafb8091e3" name="octadecanoate__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H35O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NO2S" hasOnlySubstanceUnits="true" id="M_met_L_p" metaid="_31660c24-6d1e-44f1-901e-9d1e1a6fd1bd" name="L_Methionine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO2" hasOnlySubstanceUnits="true" id="M_phe_L_c" metaid="efb6a520-6566-47f5-97e2-6b479ac974a7" name="L_Phenylalanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H8N2" hasOnlySubstanceUnits="true" id="M_ind3acnl_c" metaid="_8f6328bd-b54a-481c-ae9a-d62bbec59141" name="Indole_3_acetonitrile" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H8N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO8P" hasOnlySubstanceUnits="true" id="M_gam1p_c" metaid="d5721ea7-3c6b-4522-af59-b79d2ccc5ea0" name="D_Glucosamine_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C46H70O2" hasOnlySubstanceUnits="true" id="M_2ohph_c" metaid="_0fdfb462-13a9-4101-9ec0-697b8a86cb64" name="2_Octaprenyl_6_hydroxyphenol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C46H70O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H78N1O8P1" hasOnlySubstanceUnits="true" id="M_pe181_c" metaid="fd43a421-7afe-430a-b14b-75d2b355a298" name="phosphatidylethanolamine__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41H78N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H5N2O4" hasOnlySubstanceUnits="true" id="M_dhor_S_c" metaid="_421dc086-7ce2-4b8d-9030-1a5c923a7b2b" name="S__Dihydroorotate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H5N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8O9P" hasOnlySubstanceUnits="true" id="M_6pddgluc_c" metaid="_2793caa9-dd17-4761-aa7a-a6efa7a36fac" name="6_phospho_5_dehydro_2_deoxy_D_gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H21N7O6" hasOnlySubstanceUnits="true" id="M_thf_c" metaid="c7211891-9bf2-4e60-b017-af0d573d8261" name="5_6_7_8_Tetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H21N7O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H78N1O8P1" hasOnlySubstanceUnits="true" id="M_pe181_p" metaid="_2b926724-e5fb-40cb-8651-d6b9e7712f48" name="phosphatidylethanolamine__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41H78N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_tre_p" metaid="bbc8cd77-7423-4cba-9801-a0333bfb5efe" name="Trehalose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H22O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H29NO11" hasOnlySubstanceUnits="true" id="M_doxrbcn_p" metaid="c38ad4b2-1917-4507-ac64-0f8d0800ea51" name="doxorubicin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H29NO11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H17N2O7P" hasOnlySubstanceUnits="true" id="M_5prdmbz_c" metaid="_31322133-ee94-4555-bdbc-0ce4d1fcaebc" name="N1__5_Phospho_alpha_D_ribosyl__5_6_dimethylbenzimidazole" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H17N2O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H37N2O8PRS" hasOnlySubstanceUnits="true" id="M_cdec3eACP_c" metaid="_55282680-fafe-4f12-a120-486dd25a84e0" name="cis_dec_3_enoyl__acyl_carrier_protein___n_C10_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H37N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H53N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hcvac11eACP_c" metaid="_9137c6a2-dc9d-4d8f-a838-f0326b61f795" name="R__3_hydroxy_cis_vacc_11_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H53N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H48O5" hasOnlySubstanceUnits="true" id="M_fusa_p" metaid="ff503e73-c9f2-4b3c-8775-6bc323cb4be2" name="fusidic_acid" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H48O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H31O2" hasOnlySubstanceUnits="true" id="M_hdca_e" metaid="_145ff66e-ac94-4a8c-a834-024f1c35ee98" name="Hexadecanoate__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H31O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H23N3O14P2" hasOnlySubstanceUnits="true" id="M_4c2me_c" metaid="_294e9ce7-1a62-4f47-b794-aa14f1cd97c8" name="4__cytidine_5__diphospho__2_C_methyl_D_erythritol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H23N3O14P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H31O2" hasOnlySubstanceUnits="true" id="M_hdca_c" metaid="_10ffd07d-57bf-4f7b-ad24-9f3742897e53" name="Hexadecanoate__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H31O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9O5" hasOnlySubstanceUnits="true" id="M_skm_c" metaid="f1c19d7a-3ba5-48c5-be9b-4107b1b8dced" name="Shikimate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H9O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO4" hasOnlySubstanceUnits="true" id="M_acser_c" metaid="_7a0e7d9e-ac6c-47c6-b80e-7cffd61fe6c4" name="O_Acetyl_L_serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H58O10P1" hasOnlySubstanceUnits="true" id="M_pg120_c" metaid="_69cc85e7-8d6e-49ce-8b76-0e4e45449467" name="Phosphatidylglycerol__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H58O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H26N3O19P2" hasOnlySubstanceUnits="true" id="M_uaccg_c" metaid="_37ec534f-d7ca-48a3-9fe9-c7f96048cb01" name="UDP_N_acetyl_3_O__1_carboxyvinyl__D_glucosamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H26N3O19P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H67O8P" hasOnlySubstanceUnits="true" id="M_pa160_p" metaid="fe0dbd2d-c340-4ad2-864f-963bfd9fe175" name="1_2_dihexadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H67O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H9O10P" hasOnlySubstanceUnits="true" id="M_3psme_c" metaid="d94b5739-b97f-4b86-8b80-835b55bdd053" name="5_O__1_Carboxyvinyl__3_phosphoshikimate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H9O10P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnacys_c" metaid="_90505ec1-a563-4122-bdd0-896e9288e5ad" name="tRNA_Cys_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H15N4O12P" hasOnlySubstanceUnits="true" id="M_25aics_c" metaid="c67d6700-c935-4ec0-9260-96c100b30df9" name="S__2__5_Amino_1__5_phospho_D_ribosyl_imidazole_4_carboxamido_succinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C13H15N4O12P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H29NO11" hasOnlySubstanceUnits="true" id="M_doxrbcn_e" metaid="_0762590e-2935-478c-8104-b4a1dc326bcf" name="doxorubicin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H29NO11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N5O4" hasOnlySubstanceUnits="true" id="M_dhnpt_c" metaid="d54cfcb8-dc3a-4021-8796-53a7230eb806" name="Dihydroneopterin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H22O11" hasOnlySubstanceUnits="true" id="M_tre_e" metaid="b4805ee3-69b6-4e31-b5fb-2e3f0a9cb952" name="Trehalose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H22O11</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H31O2" hasOnlySubstanceUnits="true" id="M_hdca_p" metaid="cc21791b-825b-4982-8e9d-9dbe5e055551" name="Hexadecanoate__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H31O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H3NO4" hasOnlySubstanceUnits="true" id="M_iasp_c" metaid="_93117f5e-0e6d-4a26-991c-2fbf5b7298c8" name="Iminoaspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H3NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H25N7O17P3" hasOnlySubstanceUnits="true" id="M_nadp_c" metaid="_7a21d41c-2527-4fa5-a89d-c0f684871ac8" name="Nicotinamide_adenine_dinucleotide_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H25N7O17P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N4O8P" hasOnlySubstanceUnits="true" id="M_aicar_c" metaid="c365e5c7-e20c-491b-8600-054f09cfbd2e" name="5_Amino_1__5_Phospho_D_ribosyl_imidazole_4_carboxamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N4O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_ile_L_p" metaid="_25731139-3702-4a6d-966c-ae4d0b79a88d" name="L_Isoleucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O5" hasOnlySubstanceUnits="true" id="M_ins_c" metaid="fca9d728-c3db-4aac-a171-4b2fd1cc7a08" name="Inosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O3Se" hasOnlySubstanceUnits="true" id="M_slnt_c" metaid="d8724f50-c723-4339-90c4-d760b6ff272a" name="M_slnt_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_ile_L_e" metaid="_10d6d005-33ed-4b6a-9940-3b391a2db297" name="L_Isoleucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="O3Se" hasOnlySubstanceUnits="true" id="M_slnt_e" metaid="_66b164a6-1705-494f-905b-2b68072c7e6c" name="M_slnt_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H58O10P1" hasOnlySubstanceUnits="true" id="M_pg120_p" metaid="_8d2f2626-1dd2-4252-9ed9-0ebdb215520a" name="Phosphatidylglycerol__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H58O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_ru5p_D_c" metaid="_4e6d32d9-35cb-48cc-8b7c-551c09c7a4eb" name="D_Ribulose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_ile_L_c" metaid="_29a7e4f6-5584-4bd6-b056-f1832a26f099" name="L_Isoleucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H67O8P" hasOnlySubstanceUnits="true" id="M_pa160_c" metaid="_36623cd0-5efa-4a3e-a7e4-389e9e59611e" name="1_2_dihexadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H67O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H25O7P2" hasOnlySubstanceUnits="true" id="M_frdp_c" metaid="_14d57c51-4548-451c-9235-2ad74a5f1456" name="Farnesyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H25O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnahis_c" metaid="e909d795-209b-4437-8c01-081dddf99e02" name="tRNA_His_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H6NO2" hasOnlySubstanceUnits="true" id="M_anth_c" metaid="e755e642-5aa5-4644-a8cd-b64fe895b125" name="Anthranilate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H6NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="XH2" hasOnlySubstanceUnits="true" id="M_dsbard_p" metaid="b5ea8e0e-dfdc-41a2-b871-13f5e34057c4" name="periplasmic_protein_disulfide_isomerase_I__reduced_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H57O13P2" hasOnlySubstanceUnits="true" id="M_pgp120_c" metaid="_06e4d779-1980-4ed0-888a-4a87b304bd3c" name="Phosphatidylglycerophosphate__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H57O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnamet_c" metaid="_11ed32e7-7671-4cb2-a6d8-003f716f0c48" name="tRNA_Met_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="O3Se" hasOnlySubstanceUnits="true" id="M_slnt_p" metaid="_9a371751-3fa6-44d4-80cd-fd9398bd2621" name="M_slnt_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H51N7O26P2" hasOnlySubstanceUnits="true" id="M_ugmd_c" metaid="_6ce9d60d-b574-4192-be81-79aba1aa37bb" name="UDP_N_acetylmuramoyl_L_alanyl_D_gamma_glutamyl_meso_2_6_diaminopimelate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H51N7O26P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C30H57O13P2" hasOnlySubstanceUnits="true" id="M_pgp120_p" metaid="_9380ba53-3d75-46e5-a124-f315e5dc9226" name="Phosphatidylglycerophosphate__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C30H57O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C15668H28496N8O10693P8" hasOnlySubstanceUnits="true" id="M_OLPS_XF_p" metaid="_6b61be36-75b6-4cc1-b813-63b83b808e30" name="M_OLPS_XF_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15668H28496N8O10693P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H7O7" hasOnlySubstanceUnits="true" id="M_micit_c" metaid="_89b182bb-9101-4f1a-9c52-62f1a4245ea4" name="methylisocitrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H7O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C15668H28496N8O10693P8" hasOnlySubstanceUnits="true" id="M_OLPS_XF_e" metaid="_6534f674-cebc-4996-91cd-7c83559f5d44" name="M_OLPS_XF_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15668H28496N8O10693P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P2" hasOnlySubstanceUnits="true" id="M_h2mb4p_c" metaid="e88af32f-52bf-4ea3-96d4-c9ed6f6b9627" name="1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O11P2" hasOnlySubstanceUnits="true" id="M_dudp_c" metaid="_7f99c338-b79b-4a9e-9a3d-55ab23354df3" name="dUDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O11P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N2O15P3" hasOnlySubstanceUnits="true" id="M_utp_c" metaid="_78f0205b-6045-4d99-afb0-1036908abb19" name="UTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N2O15P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15668H28496N8O10693P8" hasOnlySubstanceUnits="true" id="M_OLPS_XF_c" metaid="e5ec0980-9d6c-4725-a6d8-01596295f970" name="M_OLPS_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15668H28496N8O10693P8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H7NO6PS" hasOnlySubstanceUnits="true" id="M_2c4mthzep_c" metaid="_5e130cfb-277f-428a-a098-650ca7817479" name="M_2c4mthzep_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H7NO6PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O9P" hasOnlySubstanceUnits="true" id="M_xmp_c" metaid="_8099d8a8-dd25-47cf-915e-c00420a9d421" name="Xanthosine_5__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O13P3" hasOnlySubstanceUnits="true" id="M_dctp_c" metaid="a08642fb-55ee-4236-8a19-b968415caa32" name="dCTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O13P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NO3" hasOnlySubstanceUnits="true" id="M_tyr_L_c" metaid="_50dc732a-90b1-4d27-bc77-30a603eeef26" name="L_Tyrosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H48O5" hasOnlySubstanceUnits="true" id="M_fusa_e" metaid="a4f39bd6-6d7a-4f83-ab21-906515cb01fe" name="fusidic_acid" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H48O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O3" hasOnlySubstanceUnits="true" id="M_4mop_c" metaid="ec7b9db0-e55f-4b85-a54e-67ba036de2ea" name="4_Methyl_2_oxopentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O14P3" hasOnlySubstanceUnits="true" id="M_gtp_c" metaid="f501b58d-8a76-4c4b-b5b0-0cb6af68405d" name="GTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="SO3" hasOnlySubstanceUnits="true" id="M_so3_c" metaid="_4530d80a-8366-4757-8e42-1a12017a710b" name="Sulfite" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: SO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N2O8P" hasOnlySubstanceUnits="true" id="M_dtmp_c" metaid="_8fa8df5e-f9a6-4a2a-9535-563565b3373c" name="dTMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Ca" hasOnlySubstanceUnits="true" id="M_ca2_p" metaid="a8f8369a-3d8f-471a-980e-ce1a5aa73b7f" name="M_ca2_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ca</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="SO3" hasOnlySubstanceUnits="true" id="M_so3_e" metaid="_770add00-6e39-4481-92b6-c6c36783a157" name="M_so3_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: SO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="SO3" hasOnlySubstanceUnits="true" id="M_so3_p" metaid="_226de117-767b-413e-b81c-90865ae649c2" name="M_so3_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: SO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Ca" hasOnlySubstanceUnits="true" id="M_ca2_e" metaid="a50766e1-e816-4b32-bd89-9ea5ed091798" name="M_ca2_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ca</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H13O10P" hasOnlySubstanceUnits="true" id="M_s7p_c" metaid="fe317856-0f85-41e7-8c01-d8fce29b7d8a" name="Sedoheptulose_7_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H13O10P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9N2O6P" hasOnlySubstanceUnits="true" id="M_eig3p_c" metaid="_570003c0-6fb9-48ed-908a-2f1b9254e4ad" name="D_erythro_1__Imidazol_4_yl_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9N2O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Ca" hasOnlySubstanceUnits="true" id="M_ca2_c" metaid="_57786765-d0e3-4a2a-ac05-231fa2bfec2d" name="M_ca2_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Ca</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO4" hasOnlySubstanceUnits="true" id="M_asp_L_p" metaid="eccbb63e-15b0-4489-8866-49653582bf25" name="L_Aspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnathr_c" metaid="caa87872-92e6-48eb-8128-373ec9bdbf40" name="tRNA_Thr_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O5" hasOnlySubstanceUnits="true" id="M_mal_L_c" metaid="_97fc5cd6-bf2d-42b1-b914-4cefd2653eaf" name="L_Malate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C47H69O3" hasOnlySubstanceUnits="true" id="M_3ophb_c" metaid="f749e6a4-51c6-4758-9ee2-e1082b623069" name="3_Octaprenyl_4_hydroxybenzoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C47H69O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C33H62N1O8P1" hasOnlySubstanceUnits="true" id="M_pe141_c" metaid="f3f86fa3-01b6-4446-b2b3-aeaddbba06eb" name="phosphatidylethanolamine__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C33H62N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H4O2S8Fe2R" hasOnlySubstanceUnits="true" id="M_sufbcd_2fe2s_c" metaid="a5250cc2-3161-4938-b306-d352fac7e26c" name="M_sufbcd_2fe2s_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H4O2S8Fe2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="XH2" hasOnlySubstanceUnits="true" id="M_grxrd_c" metaid="_8b3a6c1e-90fb-4fbd-b760-309122e8d542" name="glutaredoxin__reduced_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H10NO4" hasOnlySubstanceUnits="true" id="M_acg5sa_c" metaid="_9a6a69d9-7816-41ad-8ab3-31de0f63cebd" name="N_Acetyl_L_glutamate_5_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H10NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H52O5" hasOnlySubstanceUnits="true" id="M_12dgr120_c" metaid="_3307887d-664c-42df-99b3-c0d5d6546753" name="1_2_Diacyl_sn_glycerol__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H52O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H17N2O3" hasOnlySubstanceUnits="true" id="M_dtbt_c" metaid="_0af8ca97-a291-4301-b6f0-9f7dadb736a3" name="Dethiobiotin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H17N2O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C33H62N1O8P1" hasOnlySubstanceUnits="true" id="M_pe141_p" metaid="_4f68c804-0133-4b13-93a2-83e5d3e98b36" name="phosphatidylethanolamine__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C33H62N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C65H116O17P2" hasOnlySubstanceUnits="true" id="M_clpn141_p" metaid="b55e712c-9b04-4968-b46a-97f0ed08440c" name="cardiolipin__tetratetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C65H116O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H13OS2" hasOnlySubstanceUnits="true" id="M_lipopb_c" metaid="_9197acaa-244b-4a66-8eed-d7562ebe699a" name="lipoate__protein_bound_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H13OS2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7O6P" hasOnlySubstanceUnits="true" id="M_db4p_c" metaid="be6cc88e-8869-4f0a-95ea-1cec56d68bf0" name="3_4_dihydroxy_2_butanone_4_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO3" hasOnlySubstanceUnits="true" id="M_glu1sa_c" metaid="f8659985-6b20-4514-bdbd-5c4e7b903e27" name="L_Glutamate_1_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C74H114N14O40" hasOnlySubstanceUnits="true" id="M_murein4p4p_p" metaid="_6a913d64-d6ad-45f8-8a62-2825c672fe2e" name="two_linked_disacharide_tetrapeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C74H114N14O40</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="NH4" hasOnlySubstanceUnits="true" id="M_nh4_p" metaid="e3e1fbef-5cca-40a9-a98c-22d68418d224" name="Ammonium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NH4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_xyl_D_p" metaid="_41893ac6-e7a9-4d67-896f-7d614296c101" name="M_xyl_D_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_D_p" metaid="cc2947f7-02aa-4881-b504-703d4e90a8de" name="D_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_xyl_D_c" metaid="_55996ed3-aa03-4e98-9d22-d87f9c5ced2f" name="M_xyl_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H8O2S6R" hasOnlySubstanceUnits="true" id="M_sufbcd_c" metaid="c5d03c04-fb33-411e-a839-cb6400a75a7e" name="M_sufbcd_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H8O2S6R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_xyl_D_e" metaid="_190803c7-1935-49e4-b876-02d5c43612c7" name="M_xyl_D_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe2_c" metaid="_83518b44-6823-4dea-81ce-fabf6225aa85" name="Iron_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe2_e" metaid="_490d747d-96d9-44b5-a74f-ea08c79312b2" name="Iron_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H64N3O20P2" hasOnlySubstanceUnits="true" id="M_u23ga_XF_c" metaid="d830b30e-b667-4e90-b157-3346d21687d9" name="M_u23ga_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H64N3O20P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O2" hasOnlySubstanceUnits="true" id="M_o2s_c" metaid="_03c73ba3-08aa-40cd-b94f-267fccb11f22" name="Superoxide_anion" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="NH4" hasOnlySubstanceUnits="true" id="M_nh4_e" metaid="_238ce08f-7369-4406-88eb-adef1a32991c" name="Ammonium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NH4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H26N7O17P3" hasOnlySubstanceUnits="true" id="M_nadph_c" metaid="_79cb1c70-0605-41de-a3db-25cfc1fba402" name="Nicotinamide_adenine_dinucleotide_phosphate___reduced" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H26N7O17P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="NH4" hasOnlySubstanceUnits="true" id="M_nh4_c" metaid="f4b835be-56be-4913-9e89-389293095d56" name="Ammonium" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NH4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe2_p" metaid="e656a6e5-41a0-4119-a49e-ef75e9115fbf" name="Iron_2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H22N3O17P3" hasOnlySubstanceUnits="true" id="M_2p4c2me_c" metaid="_84c625cc-fc64-4646-9307-d5026b6bba60" name="2_phospho_4__cytidine_5__diphospho__2_C_methyl_D_erythritol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H22N3O17P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_D_c" metaid="be26013f-3974-45f5-86c0-9aede6e77f48" name="D_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_r5p_c" metaid="c107c6cb-e28d-4921-9a7e-0eb61b9914be" name="alpha_D_Ribose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H52N6O19" hasOnlySubstanceUnits="true" id="M_anhgm3p_p" metaid="e188fdee-dc75-4563-beb0-502ac6769ee4" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H52N6O19</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H73O13P2" hasOnlySubstanceUnits="true" id="M_pgp160_c" metaid="_2e531889-f3ed-462b-9edc-1ef72593aeac" name="Phosphatidylglycerophosphate__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H73O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O10P" hasOnlySubstanceUnits="true" id="M_6pgc_c" metaid="b25c40ad-223d-4863-b211-23866e13e178" name="6_Phospho_D_gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O10P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N2O14P3" hasOnlySubstanceUnits="true" id="M_dttp_c" metaid="_97d315e1-8977-45fa-abb6-cd2266001fbb" name="dTTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N2O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H55N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hoctaACP_c" metaid="cd8a2f3e-3417-498f-aedf-ccd745a14f68" name="R__3_Hydroxyoctadecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H55N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H25N2O9PRS" hasOnlySubstanceUnits="true" id="M_actACP_c" metaid="_6d21b80a-2c5d-460d-b282-74d450bbc9d5" name="Acetoacetyl_ACP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H25N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H52N6O19" hasOnlySubstanceUnits="true" id="M_anhgm3p_c" metaid="_4c36a102-91f7-4e9a-bfe5-7fb7765935e6" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H52N6O19</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H27N2O10PRS" hasOnlySubstanceUnits="true" id="M_egmeACP_c" metaid="ae0a7dd9-3026-414e-8379-a1c2e313a528" name="Enoylglutaryl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H27N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H31N2O10PRS" hasOnlySubstanceUnits="true" id="M_pimACP_c" metaid="_4a6b456d-2fb7-48bc-afc1-f4e457b15704" name="Pimeloyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H31N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H20N7O6" hasOnlySubstanceUnits="true" id="M_methf_c" metaid="c972eb08-db57-420d-9381-e52b69f26d30" name="5_10_Methenyltetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H20N7O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="O2" hasOnlySubstanceUnits="true" id="M_o2_p" metaid="_08237c0b-8d28-4610-8edb-c238b34de557" name="Dioxygen" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H73O13P2" hasOnlySubstanceUnits="true" id="M_pgp160_p" metaid="_810197d9-640e-48b3-bf2f-8d401750eff4" name="Phosphatidylglycerophosphate__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H73O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H8NO6P" hasOnlySubstanceUnits="true" id="M_phom_c" metaid="_15898cdc-8b5e-4ebd-9877-8cc61ccd4930" name="O_Phospho_L_homoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H8NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C48H83N3O15P2" hasOnlySubstanceUnits="true" id="M_cdpdodec11eg_c" metaid="_46d36596-2ce2-41b5-b835-54c7218187b4" name="CDP_1_2_dioctadec_11_enoylglycerol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C48H83N3O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H7O4" hasOnlySubstanceUnits="true" id="M_alac_S_c" metaid="_687953f9-6829-4dd8-823c-84bc6e6c29b3" name="S__2_Acetolactate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H7O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H75O8P" hasOnlySubstanceUnits="true" id="M_pa180_p" metaid="_32343c1c-0a3c-4091-86df-62277eff228c" name="1_2_dioctadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H75O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H52O5" hasOnlySubstanceUnits="true" id="M_12dgr120_p" metaid="ae07c5f0-d23b-484e-97b4-195dda7d543d" name="M_12dgr120_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H52O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12N2O2" hasOnlySubstanceUnits="true" id="M_trp_L_c" metaid="_86423dcb-31bd-4177-b7eb-f7b9c3c27372" name="L_Tryptophan" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C28H39N5O23P2" hasOnlySubstanceUnits="true" id="M_uamag_c" metaid="_8c17a128-5d55-4f9a-9be4-f4911ab7e4fb" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C28H39N5O23P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C71H107N13O38" hasOnlySubstanceUnits="true" id="M_murein3px4p_p" metaid="a00f4e63-0a18-4c52-810f-238542cdfbc1" name="two_disacharide_linked_murein_units__tripeptide_crosslinked_tetrapeptide__A2pm__D_ala___middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C71H107N13O38</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H21N2O7PRS" hasOnlySubstanceUnits="true" id="M_ACP_c" metaid="_472116a4-d2cf-45ba-915d-86b5cc105f06" name="acyl_carrier_protein" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H21N2O7PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O7PS" hasOnlySubstanceUnits="true" id="M_5mdru1p_c" metaid="_71100846-7171-4b77-8870-62eca0fd573d" name="M_5mdru1p_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O7PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H4O2" hasOnlySubstanceUnits="true" id="M_mthgxl_c" metaid="b887965c-9452-42d7-a22e-baa0a5a843ff" name="Methylglyoxal" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H4O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H75O8P" hasOnlySubstanceUnits="true" id="M_pa180_c" metaid="_3732d255-4381-4bb1-8ebd-a90d1432fbe8" name="1_2_dioctadecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H75O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H41N2O9PRS" hasOnlySubstanceUnits="true" id="M_3oddecACP_c" metaid="_6ffd781b-5e15-4bb0-adc8-b0b05ec36855" name="3_Oxododecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H41N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H65O13P2" hasOnlySubstanceUnits="true" id="M_pgp140_c" metaid="_5fb87366-9fc9-4a49-b0f1-5c18e13a6018" name="Phosphatidylglycerophosphate__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H65O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3" hasOnlySubstanceUnits="true" id="M_ser_L_c" metaid="b666fa77-cef2-4c37-8d40-a553b728e8ad" name="L_Serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H18N2O4" hasOnlySubstanceUnits="true" id="M_rdmbzi_c" metaid="_9bf3dd91-d3c2-4be1-83b9-d15eb375d1d3" name="N1__alpha_D_ribosyl__5_6_dimethylbenzimidazole" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H18N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C40H36N4O16" hasOnlySubstanceUnits="true" id="M_uppg3_c" metaid="aefadabf-4806-463b-8dcf-424db614e01e" name="Uroporphyrinogen_III" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C40H36N4O16</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2Se" hasOnlySubstanceUnits="true" id="M_selhcys_c" metaid="add92886-d68c-400d-a608-87b7d2655da8" name="Selenohomocysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3" hasOnlySubstanceUnits="true" id="M_hom_L_c" metaid="bf36d9c9-5f97-41cb-bd84-506bf8977cd0" name="L_Homoserine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7N" hasOnlySubstanceUnits="true" id="M_indole_c" metaid="c9ff885b-532d-49e6-ac9d-4ab3afdef128" name="M_indole_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H7N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H36N7O18P3S" hasOnlySubstanceUnits="true" id="M_aacoa_c" metaid="d7c74ffc-762e-4458-8aa4-990be3b32b43" name="Acetoacetyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H36N7O18P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H31N2O11PRS" hasOnlySubstanceUnits="true" id="M_opmeACP_c" metaid="_0a001492-7fe0-47cd-babd-0c3415d27b2b" name="3_Oxo_pimeloyl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H31N2O11PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NO2" hasOnlySubstanceUnits="true" id="M_gly_p" metaid="b35981b6-aee2-4541-988d-3eeb4e9a7c26" name="Glycine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H5NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H5O3" hasOnlySubstanceUnits="true" id="M_acac_c" metaid="f897ec0e-395a-4bf1-bba0-bcb8e72c3648" name="Acetoacetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O7P" hasOnlySubstanceUnits="true" id="M_dcmp_c" metaid="_6c621c31-b987-4e9f-9880-794aeff18760" name="dCMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O14P3" hasOnlySubstanceUnits="true" id="M_itp_c" metaid="_774db795-83b1-4585-8485-3bfa0156e766" name="ITP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NO2" hasOnlySubstanceUnits="true" id="M_gly_e" metaid="_11049dd9-1838-42ae-90b6-d7081ea742e8" name="Glycine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H5NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H69N1O10P1" hasOnlySubstanceUnits="true" id="M_ps161_c" metaid="ac18d7e5-0b39-4fb7-b1fc-bb08d4f1ae96" name="phosphatidylserine__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H69N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO2R" hasOnlySubstanceUnits="true" id="M_thrtrna_c" metaid="_860a736f-5b1f-44be-8559-f3a648922a5f" name="L_Threonyl_tRNA_Thr_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O2S10Fe4R" hasOnlySubstanceUnits="true" id="M_sufbcd_2fe2s2_c" metaid="a22e912a-1f29-4df2-9e79-f57714fe2a00" name="M_sufbcd_2fe2s2_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2S10Fe4R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C41H61N9O28P2" hasOnlySubstanceUnits="true" id="M_ugmda_c" metaid="c3bd4715-8445-4d3c-bbde-ea68d321c37b" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamyl_meso_2_6_diaminopimeloyl_D_alanyl_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C41H61N9O28P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NO2" hasOnlySubstanceUnits="true" id="M_gly_c" metaid="_1eb1bf75-0a4f-4556-b9a1-367bbb5da0f9" name="Glycine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H5NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H65O13P2" hasOnlySubstanceUnits="true" id="M_pgp140_p" metaid="_36585e3d-b923-4499-9905-981b8a14a1b8" name="Phosphatidylglycerophosphate__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H65O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="XH2" hasOnlySubstanceUnits="true" id="M_dsbcrd_p" metaid="_17c951f0-f66b-4570-bc25-0fc79729db39" name="protein_disulfide_isomerase_II__reduced_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_B_c" metaid="_5eef8089-a73c-420e-a253-fd35255ab7c4" name="beta_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10O5" hasOnlySubstanceUnits="true" id="M_xylu_D_c" metaid="cac99b80-c7f6-4b10-8f29-6c9bcbe43731" name="D_Xylulose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O2R" hasOnlySubstanceUnits="true" id="M_glntrna_c" metaid="_1afac2e2-a970-45d3-9b2a-a99818ff5717" name="L_Glutaminyl_tRNA_Gln_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="O2" hasOnlySubstanceUnits="true" id="M_o2_e" metaid="_7a3c546d-aae9-400f-8a68-2584af93deab" name="Dioxygen" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O2" hasOnlySubstanceUnits="true" id="M_o2_c" metaid="_920db3b3-4cfd-4d03-a1bb-99fb95379c36" name="Dioxygen" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H21N7O6" hasOnlySubstanceUnits="true" id="M_mlthf_c" metaid="d7a2c78b-dbaf-49fb-97e6-b7bdf8707ee6" name="5_10_Methylenetetrahydrofolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H21N7O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H4O2" hasOnlySubstanceUnits="true" id="M_gcald_c" metaid="_4045042c-4961-478c-9a3c-9af1e66a3996" name="Glycolaldehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H4O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3" hasOnlySubstanceUnits="true" id="M_ser_L_p" metaid="_1194e4f2-dd8f-4074-9966-92524ee9094c" name="L_Serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H21N3O16P2" hasOnlySubstanceUnits="true" id="M_udpLa4fn_c" metaid="_36f966e5-da63-4c99-8a43-558ae54009cb" name="M_udpLa4fn_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H21N3O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H51N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ocvac11eACP_c" metaid="db6136a2-7b96-4201-be7d-8455a2ca2886" name="3_oxo_cis_vacc_11_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H51N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO3" hasOnlySubstanceUnits="true" id="M_ser_L_e" metaid="d0f98745-1684-4a23-bb58-b12c850f41a2" name="L_Serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H14N3O" hasOnlySubstanceUnits="true" id="M_Ncbmpts_c" metaid="c2189df2-d53f-42e3-a49f-4df323c52e6d" name="M_Ncbmpts_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H14N3O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H19O2" hasOnlySubstanceUnits="true" id="M_dca_c" metaid="_66ed4545-1d94-4af3-b8db-d431ff6d993a" name="Decanoate__n_C10_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H19O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6O2" hasOnlySubstanceUnits="true" id="M_acetol_c" metaid="e01fadbd-2425-46dc-bf6a-0d89e3023690" name="Acetol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4" hasOnlySubstanceUnits="true" id="M_26dap_LL_c" metaid="_384c9764-e06f-4341-8700-cc42fb02c829" name="LL_2_6_Diaminoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H19O2" hasOnlySubstanceUnits="true" id="M_dca_p" metaid="e4ee61d6-be90-4fe4-a39a-b3fdf5f10d40" name="Decanoate__n_C10_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H19O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7N2" hasOnlySubstanceUnits="true" id="M_aprop_c" metaid="b4654be9-f0de-481b-99db-20c6c45e318b" name="alpha_Aminopropiononitrile" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H70N1O8P1" hasOnlySubstanceUnits="true" id="M_pe161_c" metaid="b4642c87-1848-4d86-a0e9-43f209ea22f7" name="phosphatidylethanolamine__dihexadec_9enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H70N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C37H70N1O8P1" hasOnlySubstanceUnits="true" id="M_pe161_p" metaid="_06e1ce0a-e5fd-4faa-bb0a-10460b9bbb83" name="phosphatidylethanolamine__dihexadec_9enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C37H70N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O12P3" hasOnlySubstanceUnits="true" id="M_datp_c" metaid="c8230291-6069-4824-b5c3-bd4a92f40ceb" name="dATP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O12P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H14N2O8P" hasOnlySubstanceUnits="true" id="M_nmn_p" metaid="_90a0300f-a58a-43a6-bdaa-a8f418893a53" name="M_nmn_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H14N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H27N3O7" hasOnlySubstanceUnits="true" id="M_mincyc_p" metaid="_9eec1621-5626-4005-9798-12f0bd29d07d" name="minocycline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H27N3O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H27N3O7" hasOnlySubstanceUnits="true" id="M_mincyc_e" metaid="_97f9c245-fc34-4fdc-82cc-125c0a03dba5" name="minocycline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H27N3O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H31N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hhexACP_c" metaid="_99f7a9f7-c421-452d-a75f-4e1fc7a93682" name="R__3_Hydroxyhexanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H31N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H14N2O8P" hasOnlySubstanceUnits="true" id="M_nmn_c" metaid="c527a149-b573-43fd-a723-0b38da30fd60" name="NMN" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H14N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H14N2O8P" hasOnlySubstanceUnits="true" id="M_nmn_e" metaid="b74a8305-5c42-4e87-93fe-43e5523f2d8c" name="M_nmn_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H14N2O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O6" hasOnlySubstanceUnits="true" id="M_dkglc_c" metaid="_0aff4c17-50d4-459d-8d62-799a5a7a6700" name="2_deoxy_5_keto_D_gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13N3O3" hasOnlySubstanceUnits="true" id="M_citr_L_c" metaid="b702e36d-a82d-44d2-b37e-3c02741b65b2" name="L_Citrulline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13N3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H66O10P1" hasOnlySubstanceUnits="true" id="M_pg140_c" metaid="c76e89dc-a277-4202-95f8-3ae6b5867643" name="Phosphatidylglycerol__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H66O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H14N5O8P" hasOnlySubstanceUnits="true" id="M_25drapp_c" metaid="e80af714-1c96-4b5b-bdb7-2687affcb2e8" name="2_5_Diamino_6__ribosylamino__4__3H__pyrimidinone_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H14N5O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5O3" hasOnlySubstanceUnits="true" id="M_4hbz_c" metaid="_01257ba0-9cfe-4e3c-92a6-a1755daa91fc" name="4_Hydroxybenzoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N5O20P5" hasOnlySubstanceUnits="true" id="M_gdptp_c" metaid="_74530af1-b0ef-4b97-8d8d-d032e3302ef1" name="Guanosine_3__diphosphate_5__triphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N5O20P5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7N" hasOnlySubstanceUnits="true" id="M_indole_p" metaid="c4486849-9f1e-493a-a783-f4e0f11b44a3" name="M_indole_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H7N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N4OR" hasOnlySubstanceUnits="true" id="M_argtrna_c" metaid="a29f6a64-1972-4bdd-ab20-a07401403bd7" name="L_Arginyl_tRNA_Arg_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N4OR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="S2Fe2" hasOnlySubstanceUnits="true" id="M_2fe2s_c" metaid="_042234e1-a6d4-4292-b6e0-44286a168d5f" name="2Fe_2S__iron_sulfur_cluster" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: S2Fe2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H36FeN4O16" hasOnlySubstanceUnits="true" id="M_sheme_c" metaid="_44458f90-77ca-472f-9d9c-544e52c2a5c1" name="M_sheme_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H36FeN4O16</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H7O3S" hasOnlySubstanceUnits="true" id="M_2kmb_c" metaid="dc176f49-8ff2-46a7-8d86-9197a8296b77" name="M_2kmb_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H7O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H6N2O" hasOnlySubstanceUnits="true" id="M_ncam_c" metaid="_069e618e-c1cd-4e94-8c46-163f9c8650ee" name="Nicotinamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H6N2O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H66O10P1" hasOnlySubstanceUnits="true" id="M_pg140_p" metaid="_21d0ab57-2ce0-4bb3-ac3b-3ccd08dd0f74" name="Phosphatidylglycerol__ditetradecanoyl__n_C14_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H66O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C95H152N8O28P2" hasOnlySubstanceUnits="true" id="M_uaagmda_c" metaid="_839ad1c3-0c7f-4c19-acca-2baf0c1dfe00" name="Undecaprenyl_diphospho_N_acetylmuramoyl__N_acetylglucosamine__L_ala_D_glu_meso_2_6_diaminopimeloyl_D_ala_D_ala" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C95H152N8O28P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H7N" hasOnlySubstanceUnits="true" id="M_indole_e" metaid="c7b03900-6569-43ef-b1d4-d52ac716312c" name="M_indole_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H7N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO4" hasOnlySubstanceUnits="true" id="M_glu_L_c" metaid="c88ceaf9-ec64-4a8f-ad11-4f5278c32933" name="L_Glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H19N2O18P2" hasOnlySubstanceUnits="true" id="M_udpglcur_c" metaid="ee49d88c-916d-4d33-a508-9c2c2e573e93" name="UDP_D_glucuronate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H19N2O18P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O4" hasOnlySubstanceUnits="true" id="M_dgsn_c" metaid="_8a68773e-a15e-434a-9255-30db16dd9f60" name="Deoxyguanosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O8P" hasOnlySubstanceUnits="true" id="M_gmp_c" metaid="_1fec28c5-4bfe-4f14-88cf-9c69eb01035b" name="GMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C13H20N3O8S" hasOnlySubstanceUnits="true" id="M_lgt_S_c" metaid="_0f9a8114-4c5e-4b9c-96bb-3f1fd1496125" name="R__S_Lactoylglutathione" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C13H20N3O8S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H24N6O15P2" hasOnlySubstanceUnits="true" id="M_dnad_c" metaid="_54379ba1-6b67-419c-b014-16b8f6e4f0ec" name="Deamino_NAD_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H24N6O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H16NO5" hasOnlySubstanceUnits="true" id="M_pnto_R_c" metaid="a8479452-3800-4d7d-9011-e72a1d15395e" name="R__Pantothenate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H16NO5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CH3NO" hasOnlySubstanceUnits="true" id="M_frmd_c" metaid="_8fdc8aae-84a9-44e2-bfa6-b23c27efad70" name="Formamide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH3NO</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H81O13P2" hasOnlySubstanceUnits="true" id="M_pgp180_c" metaid="_3c1a78a0-2626-4e14-a3f8-920fe080e89b" name="Phosphatidylglycerophosphate__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H81O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O3" hasOnlySubstanceUnits="true" id="M_glyclt_p" metaid="_008a959d-4c73-4490-9e90-bfaaa2800594" name="Glycolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="NO3" hasOnlySubstanceUnits="true" id="M_no3_p" metaid="a9461d95-59e4-4416-be08-825cfd9ab462" name="Nitrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H42N7O17P3S" hasOnlySubstanceUnits="true" id="M_hxcoa_c" metaid="_62173060-2365-4b0a-844b-ebe9570612c9" name="Hexanoyl_CoA__n_C6_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H42N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H30N5O9" hasOnlySubstanceUnits="true" id="M_LalaDgluMdapDala_c" metaid="bf130d8a-ea65-4f7a-8fba-05c81f75a16c" name="L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H30N5O9</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4O6" hasOnlySubstanceUnits="true" id="M_tartr_D_c" metaid="_3c55486e-a3b2-41b5-9259-17fa9bced04f" name="M_tartr_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_glc_D_p" metaid="fc4e897f-6c9e-4db6-9e88-e152a0314e66" name="D_Glucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc3p_p" metaid="_3d54e1ba-ed15-451c-9697-d90757980854" name="Glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO4" hasOnlySubstanceUnits="true" id="M_glu_L_p" metaid="_2502dd0a-d150-47fd-8c37-bcf8aca3ee2e" name="L_Glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C114H172N22O59" hasOnlySubstanceUnits="true" id="M_murein5px4px4p_p" metaid="_982b8cc4-953e-4d0a-9e96-4b7c42b10abd" name="three_disacharide_linked_murein_units__pentapeptide_crosslinked_tetrapeptide__A2pm__D_ala__tetrapeptide_corsslinked_tetrapeptide__A2pm__D_ala____middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C114H172N22O59</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="XH2" hasOnlySubstanceUnits="true" id="M_dsbdrd_c" metaid="a64e1365-cc16-429a-b6d5-c065eab028b0" name="fused_thiol_disulfide_interchange_protein__reduced_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11NO4" hasOnlySubstanceUnits="true" id="M_chitos_c" metaid="_2bcac2b8-afeb-48f4-ae21-030887e3a747" name="Chitosan" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="SFe2" hasOnlySubstanceUnits="true" id="M_2fe1s_c" metaid="_17a6cca5-606c-4941-b5d6-7835d25c528a" name="2Fe_1S__desulfurated_iron_sulfur_cluster" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: SFe2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7O7P" hasOnlySubstanceUnits="true" id="M_e4p_c" metaid="_39835147-d3d9-49a8-885f-283d08d181fd" name="D_Erythrose_4_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc3p_e" metaid="e5abd030-9340-4a4e-bbbd-5b21d8656a66" name="Glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="NO3" hasOnlySubstanceUnits="true" id="M_no3_c" metaid="f978f7a7-8bf7-4482-b9c2-beca681339e9" name="Nitrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H55O4" hasOnlySubstanceUnits="true" id="M_2hp6mobq_me_c" metaid="_33497ea1-1610-4c76-9877-727932b040a4" name="2_Hexaprenyl_3_methyl_5_hydroxy_6_methoxy_1_4_benzoquinone" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H55O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O3" hasOnlySubstanceUnits="true" id="M_glyclt_e" metaid="_554d2a97-1bee-4264-9fa6-09be7456bcbb" name="Glycolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H3O3" hasOnlySubstanceUnits="true" id="M_glyclt_c" metaid="_65b2183a-ddcf-4381-9de2-a107d713f3a8" name="Glycolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C18H30N5O9" hasOnlySubstanceUnits="true" id="M_LalaDgluMdapDala_p" metaid="_1d4db780-a420-49a8-83b6-7216e38f38dd" name="L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C18H30N5O9</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="NO3" hasOnlySubstanceUnits="true" id="M_no3_e" metaid="e581c969-9254-4298-8248-0014f6c0c620" name="Nitrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7O6P" hasOnlySubstanceUnits="true" id="M_glyc3p_c" metaid="_6feed938-b90a-4460-8d02-c8d50ef986ac" name="Glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H81O13P2" hasOnlySubstanceUnits="true" id="M_pgp180_p" metaid="_2858a7ce-a73d-4680-9ac4-c5dac0db95a5" name="Phosphatidylglycerophosphate__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H81O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO4" hasOnlySubstanceUnits="true" id="M_glu_L_e" metaid="b2a967d6-406d-4bcc-ab0f-b663177bbcdc" name="L_Glutamate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H31N2O10PRS" hasOnlySubstanceUnits="true" id="M_epmeACP_c" metaid="_21d1ec1b-e598-4833-9f17-a385008ae05b" name="Enoylpimeloyl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H31N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="H2" hasOnlySubstanceUnits="true" id="M_h2_p" metaid="f9691f5b-e9a3-46e9-ba1f-01fc7b113133" name="M_h2_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_glc_D_c" metaid="_6565bacc-687b-449e-a5f4-9ca05d63f802" name="D_Glucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12O6" hasOnlySubstanceUnits="true" id="M_glc_D_e" metaid="_72aab22e-24dc-4b6f-8b30-b0522ba63937" name="D_Glucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11NOR" hasOnlySubstanceUnits="true" id="M_phetrna_c" metaid="c3fe7524-0ceb-4b49-936a-7221e11250e1" name="L_Phenylalanyl_tRNA_Phe_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H53N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ooctdACP_c" metaid="_13fdd979-fb86-4511-bba9-1aac7d2c3f2e" name="3_Oxooctadecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H53N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O7" hasOnlySubstanceUnits="true" id="M_glcn_c" metaid="cb536510-dcdf-4b75-a366-17ae03734737" name="D_Gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O2" hasOnlySubstanceUnits="true" id="M_ppa_c" metaid="_9674bdfc-fb67-4d2a-8e5a-6b29aa955e0e" name="Propionate__n_C3_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H18NO8" hasOnlySubstanceUnits="true" id="M_acmum_p" metaid="_8d4998e5-1b2b-460a-b8bd-129c29763583" name="M_acmum_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H18NO8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H74O10P1" hasOnlySubstanceUnits="true" id="M_pg160_c" metaid="_121f3ff0-ac59-41a0-a978-2201a7442d0c" name="Phosphatidylglycerol__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H74O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6NO6P" hasOnlySubstanceUnits="true" id="M_pser_L_c" metaid="e14edc1e-83a9-4b8f-8b17-a9be3ffae083" name="O_Phospho_L_serine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3" hasOnlySubstanceUnits="true" id="M_athr_L_c" metaid="_1c12eff7-8faa-474b-a5cd-871c7482cb12" name="L_Allo_threonine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3S" hasOnlySubstanceUnits="true" id="M_cgly_p" metaid="_3f734818-c32c-4729-a252-3045cff50a39" name="Cys_Gly" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H20N6O5S" hasOnlySubstanceUnits="true" id="M_ahcys_c" metaid="_303ab19e-02a1-48ac-8d2c-e25e1dbe9c1e" name="S_Adenosyl_L_homocysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H20N6O5S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="H2" hasOnlySubstanceUnits="true" id="M_h2_e" metaid="bcf85acc-a44f-467a-9cc5-c5e5f281e208" name="M_h2_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H45N2O8PRS" hasOnlySubstanceUnits="true" id="M_tdeACP_c" metaid="_83fee56a-50df-467a-8ab0-75d7032b0bcb" name="cis_tetradec_7_enoyl__acyl_carrier_protein___n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H45N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H2" hasOnlySubstanceUnits="true" id="M_h2_c" metaid="_2155aa07-cf0e-4b2f-a153-5d4c88585a86" name="H2" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H10N2O11P" hasOnlySubstanceUnits="true" id="M_orot5p_c" metaid="_39237433-67e9-4f38-a4bd-d779b10786ce" name="Orotidine_5__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H10N2O11P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_man1p_c" metaid="_3c7cb235-19e6-4f35-8408-9af3a85ca92b" name="D_Mannose_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="XH" hasOnlySubstanceUnits="true" id="M_flxr_c" metaid="_7a8b6c4f-b4c2-4987-9e52-5356b96bfc4b" name="M_flxr_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O3" hasOnlySubstanceUnits="true" id="M_3mop_c" metaid="a523d445-008c-4f73-91d3-478484d82d72" name="S__3_Methyl_2_oxopentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C49H56FeN4O5" hasOnlySubstanceUnits="true" id="M_hemeO_c" metaid="_0862868f-02c0-4967-861e-a89874c6b49a" name="Heme_O" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C49H56FeN4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O7" hasOnlySubstanceUnits="true" id="M_glcn_p" metaid="_30675c26-1429-4eb7-a42f-3b346589fbef" name="D_Gluconate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H74O10P1" hasOnlySubstanceUnits="true" id="M_pg160_p" metaid="_41f5eda1-869c-44af-a7a1-e2ee7a28e24f" name="Phosphatidylglycerol__dihexadecanoyl__n_C16_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H74O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H10N2O3S" hasOnlySubstanceUnits="true" id="M_cgly_c" metaid="_8f4859cd-9f82-4c9a-88b1-2dd331db4644" name="Cys_Gly" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H10N2O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O4" hasOnlySubstanceUnits="true" id="M_fum_c" metaid="_31430382-6fc5-4576-ae42-16748a9951bf" name="Fumarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_f6p_c" metaid="e58dcf26-8f99-4c9c-a634-506b81f9fb2a" name="D_Fructose_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H47N2O8PRS" hasOnlySubstanceUnits="true" id="M_t3c9palmeACP_c" metaid="_9aeb9984-cc71-424e-8288-087fa414f07d" name="trans_3_cis_9_palmitoleoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H47N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O4" hasOnlySubstanceUnits="true" id="M_fum_e" metaid="fc9ab27f-4e10-4baa-b4d7-a2d9134f3e3f" name="Fumarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_ru5p_L_c" metaid="_5aa83291-7ce9-4bc9-909f-2193bc0ed427" name="M_ru5p_L_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12Cl2N2O5" hasOnlySubstanceUnits="true" id="M_cm_p" metaid="_397a31ba-d391-49b7-b384-000d062a6aaa" name="Chloramphenicol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12Cl2N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C43H58N4O12" hasOnlySubstanceUnits="true" id="M_rfamp_e" metaid="_352e74f1-4166-49d0-bb20-fb3eb7aeb53f" name="rifampin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C43H58N4O12</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C1O2X" hasOnlySubstanceUnits="true" id="M_moadcoo_c" metaid="a8316226-bed9-4f26-93a8-6be58383b8b6" name="MoaD_Protein_with_carboxylate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C1O2X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H51N2O8PRS" hasOnlySubstanceUnits="true" id="M_palmACP_c" metaid="_3762fc7b-6549-4a88-9003-48b60822fd9b" name="Palmitoyl_ACP__n_C16_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H51N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12Cl2N2O5" hasOnlySubstanceUnits="true" id="M_cm_e" metaid="_9a640f21-052a-4b92-9827-f460860e5f2a" name="Chloramphenicol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12Cl2N2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C43H58N4O12" hasOnlySubstanceUnits="true" id="M_rfamp_p" metaid="_9e523d1e-bcfb-4063-b0b4-9b52feb69de7" name="rifampin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C43H58N4O12</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O4" hasOnlySubstanceUnits="true" id="M_fum_p" metaid="_074c5051-13ae-413f-946f-848579c350a9" name="Fumarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7NO3" hasOnlySubstanceUnits="true" id="M_2aobut_c" metaid="_846910d3-7931-4ddb-9936-20ee14b3ad7e" name="L_2_Amino_3_oxobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H64O5" hasOnlySubstanceUnits="true" id="M_12dgr161_c" metaid="_73cd75d1-afde-4e2b-9ae1-eee238056f1f" name="1_2_Diacyl_sn_glycerol__dihexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H64O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H51N2O8PRS" hasOnlySubstanceUnits="true" id="M_t3c11vaceACP_c" metaid="_2e9bdb87-6192-421d-bd4b-73afeb5524eb" name="trans_3_cis_11_vacceoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H51N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H12NO9P" hasOnlySubstanceUnits="true" id="M_nicrnt_c" metaid="cf878e02-dec2-4a25-aafa-e0c88bc7cc46" name="Nicotinate_D_ribonucleotide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H12NO9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O7" hasOnlySubstanceUnits="true" id="M_icit_p" metaid="_2ea942c4-3bb3-4f7b-a6d2-b3dd291513f3" name="M_icit_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C22H24N2O8" hasOnlySubstanceUnits="true" id="M_ttrcyc_p" metaid="c872ba42-6e97-4150-8915-a81262ca281c" name="tetracycline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C22H24N2O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H4O10P2" hasOnlySubstanceUnits="true" id="M_13dpg_c" metaid="_270a294f-95f4-44eb-b2b5-d1521a2fff09" name="3_Phospho_D_glyceroyl_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H4O10P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C22H24N2O8" hasOnlySubstanceUnits="true" id="M_ttrcyc_e" metaid="f670aae4-f0dd-4f6b-8ed1-a4fa8390d25a" name="tetracycline" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C22H24N2O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H53N2O8PRS" hasOnlySubstanceUnits="true" id="M_toctd2eACP_c" metaid="_8280755e-4003-4945-8e15-4f0cb979c977" name="trans_octadec_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H53N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O4" hasOnlySubstanceUnits="true" id="M_2ahbut_c" metaid="d2a9e733-d780-46e4-830b-4945c038cd20" name="S__2_Aceto_2_hydroxybutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H122O61" hasOnlySubstanceUnits="true" id="M_dextrin_e" metaid="aba1bc8e-b8b7-490e-956a-4dee1f2680ab" name="M_dextrin_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H122O61</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O6" hasOnlySubstanceUnits="true" id="M_g15l_p" metaid="_0a17ce51-04cc-417a-ab06-c85a5e0c8db2" name="D_Glucono_1_5_lactone" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O7" hasOnlySubstanceUnits="true" id="M_icit_c" metaid="_390ea3f2-ac4d-4790-9ee7-cdb1988ba3c1" name="Isocitrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaarg_c" metaid="_46cb99e1-98d9-44f4-8f95-544977a6f5e7" name="tRNA_Arg_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O6PS" hasOnlySubstanceUnits="true" id="M_dkmpp_c" metaid="d3778e9a-8347-4952-b345-6ecea063cafe" name="M_dkmpp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O6PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H16NO7" hasOnlySubstanceUnits="true" id="M_anhm_c" metaid="d8f281e8-5887-440f-9c17-f97971d3c49e" name="1_6_anhydrous_N_Acetylmuramate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H16NO7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N5O3" hasOnlySubstanceUnits="true" id="M_dad_5_c" metaid="_162bf943-8215-436c-9a89-d5c63f6d3dfb" name="5__Deoxyadenosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Mn" hasOnlySubstanceUnits="true" id="M_mn2_e" metaid="_0ea01ae0-7a5d-47a4-8207-c196a812ded6" name="Mn2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Mn" hasOnlySubstanceUnits="true" id="M_mn2_c" metaid="_83d9933b-0372-4a51-bfc7-169bdd775534" name="Manganese_II_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H9O6" hasOnlySubstanceUnits="true" id="M_dglca_c" metaid="_03dac608-6eae-4ee4-91b3-0618ed2fc166" name="5_deoxy_D_glucuronate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H9O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O3" hasOnlySubstanceUnits="true" id="M_lac_D_c" metaid="_92fe2025-bab0-45f4-89f0-5a654c84b81c" name="D_Lactate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H13N5O3" hasOnlySubstanceUnits="true" id="M_dhbpt_c" metaid="_2ef223f7-d5f3-4373-8f36-0fbb847f6ab2" name="6_7_Dihydrobiopterin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H13N5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H15N3O8P" hasOnlySubstanceUnits="true" id="M_fpram_c" metaid="_11f9ced6-220d-4c17-bd17-96e8243fe635" name="2__Formamido__N1__5_phospho_D_ribosyl_acetamidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H15N3O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C56H104N2O23P2" hasOnlySubstanceUnits="true" id="M_lipidA_XF_c" metaid="edce8bf3-d3c8-44d2-a24c-327cfbec2374" name="M_lipidA_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C56H104N2O23P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H2O6P" hasOnlySubstanceUnits="true" id="M_pep_c" metaid="_2765b289-a330-4856-81c4-71992fa0bb32" name="Phosphoenolpyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H2O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H11NOSR" hasOnlySubstanceUnits="true" id="M_mettrna_c" metaid="_94574803-7c62-41d4-8341-a609b551a430" name="L_Methionyl_tRNA__Met_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H11NOSR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Mn" hasOnlySubstanceUnits="true" id="M_mn2_p" metaid="_63cac064-c94d-4dde-b64a-11d3f308d2f5" name="Mn2_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Mn</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C24H36N7O17P3S" hasOnlySubstanceUnits="true" id="M_ppcoa_c" metaid="a27fc8f7-130b-4386-849e-70cb867096c9" name="Propanoyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C24H36N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C23H39N2O8PRS" hasOnlySubstanceUnits="true" id="M_t3c5ddeceACP_c" metaid="_4bc7d4c1-4433-455a-8181-396b0a525b28" name="trans_3_cis_5_dodecenoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C23H39N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H58N1O8P1" hasOnlySubstanceUnits="true" id="M_pe120_c" metaid="_2c84ea61-f646-49c6-ac1e-dbc1f2fdf85d" name="phosphatidylethanolamine__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H58N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H12N3O" hasOnlySubstanceUnits="true" id="M_histd_c" metaid="d5fb9dd9-a2f3-407e-9b0d-a719c112bc83" name="L_Histidinol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H12N3O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H56O5" hasOnlySubstanceUnits="true" id="M_12dgr141_c" metaid="_16a0df8e-1911-417d-b125-2918f2299f9a" name="1_2_Diacyl_sn_glycerol__ditetradec_7_enoyl__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H56O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H58N1O8P1" hasOnlySubstanceUnits="true" id="M_pe120_p" metaid="_2efe61fc-09ae-4a2b-b42e-7f9d89a4bb36" name="phosphatidylethanolamine__didodecanoyl__n_C12_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H58N1O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H3NO4" hasOnlySubstanceUnits="true" id="M_quln_c" metaid="_7e704a7e-2d52-4f55-a31c-bb6bf13405bc" name="Quinolinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H3NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H2O6P" hasOnlySubstanceUnits="true" id="M_2pglyc_c" metaid="a9c779bc-73bb-429c-82ac-f1d5e8105b9e" name="2_Phosphoglycolate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H2O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3" hasOnlySubstanceUnits="true" id="M_thr_L_e" metaid="_7ed40c3c-689a-4997-b5ad-0079ba185554" name="L_Threonine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H9NO3" hasOnlySubstanceUnits="true" id="M_thr_L_c" metaid="ccef9837-5d96-4e60-9c0c-2672a5629645" name="L_Threonine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H25O2" hasOnlySubstanceUnits="true" id="M_ttdcea_p" metaid="f59f3bc5-3c3c-4fd6-ae5b-939942a79ce0" name="tetradecenoate__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H25O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8O4" hasOnlySubstanceUnits="true" id="M_2ippm_c" metaid="d51257c2-db77-41ea-9b03-b8d41edcae98" name="2_Isopropylmaleate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H8O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO7P" hasOnlySubstanceUnits="true" id="M_glu5p_c" metaid="_4523a949-71c1-409d-9cba-ec22cd14f73c" name="L_Glutamate_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4" hasOnlySubstanceUnits="true" id="M_26dap_M_e" metaid="_560a0eeb-b33c-4ace-aef9-bcac1be88ff4" name="M_26dap_M_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14NO5" hasOnlySubstanceUnits="true" id="M_gam_p" metaid="_7d19cc7c-930d-466e-845e-2aedfc790de2" name="M_gam_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H14NO5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H27N7O14P2" hasOnlySubstanceUnits="true" id="M_nadh_c" metaid="feac70b0-8dd4-49dd-9afb-0fc93df5401c" name="Nicotinamide_adenine_dinucleotide___reduced" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H27N7O14P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H25O2" hasOnlySubstanceUnits="true" id="M_ttdcea_e" metaid="bafb266d-7642-47fc-bdc2-40a2f41bf73b" name="tetradecenoate__n_C14_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H25O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C63H103NO12P2" hasOnlySubstanceUnits="true" id="M_unaga_c" metaid="_97140357-6131-49e4-9c24-ca9e51a3081f" name="M_unaga_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C63H103NO12P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaphe_c" metaid="_36e668f0-8836-43fc-b8c4-e22366d250a1" name="tRNA_Phe_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O6P" hasOnlySubstanceUnits="true" id="M_damp_c" metaid="f801f755-6314-40e9-9e9d-68dd8967bcbf" name="dAMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4" hasOnlySubstanceUnits="true" id="M_26dap_M_p" metaid="_8537f091-4c5b-4e94-9386-71ef84199284" name="M_26dap_M_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H25O2" hasOnlySubstanceUnits="true" id="M_ttdcea_c" metaid="_7387439c-8c10-4deb-b715-adda9dd0959a" name="M_ttdcea_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H25O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H14NO5" hasOnlySubstanceUnits="true" id="M_gam_e" metaid="bf3397ff-7c27-49cf-a5e5-8f48f161aba5" name="M_gam_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H14NO5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O4" hasOnlySubstanceUnits="true" id="M_din_c" metaid="_9c2d087d-1c06-4a51-9bc1-8b8202068d0c" name="Deoxyinosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H2O7P" hasOnlySubstanceUnits="true" id="M_3php_c" metaid="_0fb5b963-9894-4c7e-900d-7d5b7f4ccbb1" name="3_Phosphohydroxypyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H2O7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4" hasOnlySubstanceUnits="true" id="M_26dap_M_c" metaid="_6b4708cc-8d37-4523-a33a-8a3f548e9865" name="meso_2_6_Diaminoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H7NO3" hasOnlySubstanceUnits="true" id="M_aspsa_c" metaid="_1995c6c7-5118-4172-82bb-296c56d148c8" name="L_Aspartate_4_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H7NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="NO" hasOnlySubstanceUnits="true" id="M_no_c" metaid="f5066035-7862-4549-9d2b-5e71f281bf18" name="Nitric_oxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C48H74O3" hasOnlySubstanceUnits="true" id="M_2ommbl_c" metaid="_40ed71e3-12af-489c-a5e3-a5ba53cb72bc" name="2_Octaprenyl_3_methyl_6_methoxy__1_4_benzoquinol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C48H74O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H25N4O8" hasOnlySubstanceUnits="true" id="M_LalaDgluMdap_p" metaid="e73ed5ad-98a2-4070-80bc-d3ece99cd822" name="L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H25N4O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="NO" hasOnlySubstanceUnits="true" id="M_no_e" metaid="a0e6dc03-ad15-426d-9a8e-80908dccacac" name="Nitric_oxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H25N4O8" hasOnlySubstanceUnits="true" id="M_LalaDgluMdap_c" metaid="_8624a039-983f-4473-82b6-1b7be44491fa" name="L_alanine_D_glutamate_meso_2_6_diaminoheptanedioate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H25N4O8</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CO" hasOnlySubstanceUnits="true" id="M_co_c" metaid="f711aaca-47ad-450e-8cca-6070cf65cd51" name="M_co_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CO</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O10P2" hasOnlySubstanceUnits="true" id="M_dcdp_c" metaid="d547ceea-a425-42bc-87d6-39f4026f90a9" name="dCDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O10P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="CHO2" hasOnlySubstanceUnits="true" id="M_for_e" metaid="_1cf5bbb7-1e75-4de6-bf05-dc6db17d2a86" name="Formate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CHO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H77N1O10P1" hasOnlySubstanceUnits="true" id="M_ps181_c" metaid="b0f4bfe5-188c-46b3-a87f-2c85f2a79d71" name="phosphatidylserine__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H77N1O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C87H139N7O23P2" hasOnlySubstanceUnits="true" id="M_uagmda_c" metaid="_52361ad1-ff9e-4601-b62f-10d13922c6b9" name="Undecaprenyl_diphospho_N_acetylmuramoyl_L_alanyl_D_glutamyl_meso_2_6_diaminopimeloyl_D_alanyl_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C87H139N7O23P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O11P2" hasOnlySubstanceUnits="true" id="M_gdp_c" metaid="_4d576e1f-6b4a-47cc-963f-9390631ffd78" name="GDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O11P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H12N3O14P3" hasOnlySubstanceUnits="true" id="M_ctp_c" metaid="e2a3d3fa-1d81-45c3-8f1b-92f4ffeecca8" name="CTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H12N3O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H14N2O4S" hasOnlySubstanceUnits="true" id="M_cyst_L_c" metaid="_04430647-1956-47c6-b6e4-6ddb82c1762f" name="L_Cystathionine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H14N2O4S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CHO2" hasOnlySubstanceUnits="true" id="M_for_c" metaid="_90d52229-a7c1-4b06-b990-b044c20d6001" name="Formate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CHO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C15H22N2O17P2" hasOnlySubstanceUnits="true" id="M_udpg_c" metaid="_25040098-e003-4d31-b33b-a7110bc635b2" name="UDPglucose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C15H22N2O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8O14P3" hasOnlySubstanceUnits="true" id="M_prpp_c" metaid="_1fa598cf-8d1c-40fa-ae87-674bb649493b" name="5_Phospho_alpha_D_ribose_1_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8O14P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H10N5O" hasOnlySubstanceUnits="true" id="M_preq1_c" metaid="_7561f96b-0fd2-4731-9323-d56c511ab333" name="7_aminomethyl_7_deazaguanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H10N5O</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C73H132O17P2" hasOnlySubstanceUnits="true" id="M_clpn161_p" metaid="_563f51c7-0c46-4fc5-8a8d-ba9a4903ad18" name="cardiolipin__tetrahexadec_9_enoyl__n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C73H132O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe3_e" metaid="_48392e55-55a3-43d1-b536-869f6a74fd42" name="Iron_3_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H56O5" hasOnlySubstanceUnits="true" id="M_12dgr141_p" metaid="_754f9919-8169-46b9-8786-2863fde130ee" name="M_12dgr141_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H56O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe3_c" metaid="_8a3ed28f-207c-43fe-b93d-1cc888d93a36" name="Iron_3_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H20NO6P" hasOnlySubstanceUnits="true" id="M_g3pc_p" metaid="_3038c5c8-ce15-40c6-abc5-8979b9a20954" name="sn_Glycero_3_phosphocholine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H20NO6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C47H72O3" hasOnlySubstanceUnits="true" id="M_2ombzl_c" metaid="_198940b7-84bf-4c2e-8459-5c043ce406c2" name="2_Octaprenyl_6_methoxy_1_4_benzoquinol" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C47H72O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H33N2O8PRS" hasOnlySubstanceUnits="true" id="M_toct2eACP_c" metaid="a191ac13-d59a-4a6b-ae86-5a90fba15916" name="trans_Oct_2_enoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H33N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C120H186N24O63" hasOnlySubstanceUnits="true" id="M_murein5p5p5p_p" metaid="_58b3d38e-2db7-4756-83ac-4ccc4b40fed5" name="three_linked_disacharide_pentapeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C120H186N24O63</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10NO2SR" hasOnlySubstanceUnits="true" id="M_fmettrna_c" metaid="be2f4cde-d70c-4406-8a4e-b5a64ac4fcd0" name="N_Formylmethionyl_tRNA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10NO2SR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="NO" hasOnlySubstanceUnits="true" id="M_no_p" metaid="b5ab317d-edc9-4068-9a7a-7877a6a0be75" name="Nitric_oxide" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: NO</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C24H33N7O19P3S" hasOnlySubstanceUnits="true" id="M_malcoa_c" metaid="e598fbb1-d731-4b58-ac81-16ff15473763" name="Malonyl_CoA" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C24H33N7O19P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="Fe" hasOnlySubstanceUnits="true" id="M_fe3_p" metaid="a6c68052-dae6-45cc-8564-bfa30186a4a8" name="Iron_3_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: Fe</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="X" hasOnlySubstanceUnits="true" id="M_dsbaox_p" metaid="_301d5e8f-ca9f-481d-8160-a26c73c5f724" name="periplasmic_protein_disulfide_isomerase_I__oxidized_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H35O7P1" hasOnlySubstanceUnits="true" id="M_1hdec9eg3p_c" metaid="f10511bc-e638-4271-9657-1a007c59f626" name="1_hexadec_9_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H35O7P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H3O3" hasOnlySubstanceUnits="true" id="M_pyr_e" metaid="_2d2e9441-87cd-4cb5-9dae-d9b322fab05c" name="Pyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C21H39O7P1" hasOnlySubstanceUnits="true" id="M_1odec11eg3p_c" metaid="_355949af-0df1-4d5d-9200-f9726a162b09" name="1_octadec_11_enoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C21H39O7P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H3O3" hasOnlySubstanceUnits="true" id="M_pyr_c" metaid="_7a730f38-2843-43f2-a9c2-db9dbd8454a6" name="Pyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H9NO8P" hasOnlySubstanceUnits="true" id="M_acg5p_c" metaid="_9587ca03-006b-4462-bba4-1653f9d3be4c" name="N_Acetyl_L_glutamyl_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H9NO8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO4" hasOnlySubstanceUnits="true" id="M_asp_L_c" metaid="_8ef34f64-9157-434e-9d4e-2f71a589e3a1" name="L_Aspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO4" hasOnlySubstanceUnits="true" id="M_asp_L_e" metaid="_97882726-764d-40b7-8ecd-54c5ae404ee5" name="L_Aspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6NO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C55H89O4P" hasOnlySubstanceUnits="true" id="M_udcpp_c" metaid="fbdecdc5-da38-4485-9402-e37a7ee8e96d" name="Undecaprenyl_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C55H89O4P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_h_p" metaid="dad4a909-6ffc-4ebb-a221-6e8a92044868" name="proton_H_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_L_p" metaid="_43a0d9fd-6b9b-4ece-a292-f121ca1df4ed" name="L_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H4NO2" hasOnlySubstanceUnits="true" id="M_nac_e" metaid="_43e8eaa8-5a8e-4ab1-9f04-6aa38022fcc0" name="Nicotinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H4NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NO3" hasOnlySubstanceUnits="true" id="M_glu5sa_c" metaid="_0902e050-92cb-4616-b47f-da9cba6a8230" name="L_Glutamate_5_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NO3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H4NO2" hasOnlySubstanceUnits="true" id="M_nac_c" metaid="c2dbb7ce-9fe2-454a-af2e-5fb6ab06ed23" name="Nicotinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H4NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="X" hasOnlySubstanceUnits="true" id="M_grxox_c" metaid="fc14c6e0-1cb3-43ed-bf25-0050931862ea" name="glutaredoxin__oxidized_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H72O5" hasOnlySubstanceUnits="true" id="M_12dgr181_c" metaid="_37ab8510-c554-4d80-877b-373eb15f23bf" name="1_2_Diacyl_sn_glycerol__dioctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H72O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H4NO2" hasOnlySubstanceUnits="true" id="M_nac_p" metaid="a45e0051-33de-4c18-9c02-cb86aed92e9c" name="Nicotinate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H4NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C55H89O4P" hasOnlySubstanceUnits="true" id="M_udcpp_p" metaid="_07c547ef-ba13-4bff-bbab-46534805b2a6" name="Undecaprenyl_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C55H89O4P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C39H72O5" hasOnlySubstanceUnits="true" id="M_12dgr181_p" metaid="_7df07bcf-bf48-4acf-a654-02364352ec1e" name="M_12dgr181_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C39H72O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H31N9O15P2" hasOnlySubstanceUnits="true" id="M_fad_c" metaid="cd16f790-67a3-4fc2-a2cd-aecf6e72c44a" name="Flavin_adenine_dinucleotide_oxidized" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H31N9O15P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O7P2" hasOnlySubstanceUnits="true" id="M_dmpp_c" metaid="b2544a1f-0dc7-49d5-9a1b-18fa03419b09" name="Dimethylallyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H6NO7P" hasOnlySubstanceUnits="true" id="M_4pasp_c" metaid="_53e3625c-2d16-4306-9cb8-acf6724f9cd6" name="4_Phospho_L_aspartate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H6NO7P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H13N6O3" hasOnlySubstanceUnits="true" id="M_dhpt_c" metaid="_0c240f4f-7f99-4dbc-ac4b-d27d264700ae" name="Dihydropteroate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H13N6O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H43N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ocmrs7eACP_c" metaid="e8804b0a-f001-40a8-b73c-7f148cd1c30e" name="3_oxo_cis_myristol_7_eoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H43N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8NO3R" hasOnlySubstanceUnits="true" id="M_glutrna_c" metaid="c63b44f5-a227-40a5-8110-461e7664c5e2" name="L_Glutamyl_tRNA_Glu_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8NO3R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O5" hasOnlySubstanceUnits="true" id="M_oaa_c" metaid="_54e0d9f5-b91e-48f1-b964-c6d4504b8933" name="Oxaloacetate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_L_c" metaid="a136a98d-77aa-4926-b835-cb7b7364bd5b" name="L_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N4O6" hasOnlySubstanceUnits="true" id="M_xtsn_c" metaid="_13634181-c76a-4a81-b729-e1e18323b2ec" name="Xanthosine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N4O6</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O5" hasOnlySubstanceUnits="true" id="M_oaa_e" metaid="_39f1b8aa-d3a3-4cb2-84a8-96c9406e664e" name="M_oaa_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaala_c" metaid="_241262b3-1524-4949-b2f2-307c77e80759" name="tRNA_Ala_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O3" hasOnlySubstanceUnits="true" id="M_3hpp_p" metaid="_1cd48d3e-3831-4e76-ac5c-b6237e335ed3" name="3_Hydroxypropanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2" hasOnlySubstanceUnits="true" id="M_ala_L_e" metaid="e2883b30-80ea-47a4-a3a5-03271a3893cd" name="L_Alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_mi1p_D_c" metaid="f1cf004a-6ae1-4dfa-8855-6d68f21c58fe" name="1D_myo_Inositol_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H6NO5S2" hasOnlySubstanceUnits="true" id="M_scys_L_c" metaid="_7ebc2b90-6180-45f7-bd7b-7121cc072a5e" name="S_Seleno_L_cysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H6NO5S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H2O5" hasOnlySubstanceUnits="true" id="M_oaa_p" metaid="_0c6ba5c2-a68f-4439-9bb4-e7b1077b2030" name="M_oaa_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H2O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C9H11N3O9P" hasOnlySubstanceUnits="true" id="M_5aizc_c" metaid="e0424e3d-345a-4d11-881b-4500f38d4b43" name="5_amino_1__5_phospho_D_ribosyl_imidazole_4_carboxylate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C9H11N3O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaval_c" metaid="_9307e0c3-9ddb-4e62-ae32-9693117c070e" name="tRNA_Val_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C11H7O4" hasOnlySubstanceUnits="true" id="M_dhna_c" metaid="c6a93da8-05cc-4361-bfec-283bfdd5c597" name="M_dhna_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C11H7O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H51O8P1" hasOnlySubstanceUnits="true" id="M_pa120_p" metaid="e3fff18b-7796-462c-98e1-3d485f513e96" name="1_2_didodecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H51O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O3" hasOnlySubstanceUnits="true" id="M_3hpp_e" metaid="b0d55aa8-bf10-42c8-b8ea-123b123a6cdf" name="3_Hydroxypropanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_h_c" metaid="_68418409-f335-431c-8996-4d0f8aa940b0" name="proton_H_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O3" hasOnlySubstanceUnits="true" id="M_3hpp_c" metaid="c5750266-8367-4dcd-b8b6-0c79a496084e" name="3_Hydroxypropanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnaglu_c" metaid="d6f2c2e1-8337-449e-a46c-53bb916b88db" name="tRNA__Glu_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_gal1p_c" metaid="f6679c5a-159e-4867-a60f-268f845fd101" name="alpha_D_Galactose_1_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="H" hasOnlySubstanceUnits="true" id="M_h_e" metaid="f1b6cbf1-69eb-4bd8-bc37-e876e4dc85e7" name="proton_H_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: H</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H3O7" hasOnlySubstanceUnits="true" id="M_osucc_c" metaid="_4a139b8b-b190-4e29-8295-00af65fb89c0" name="M_osucc_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H3O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="XH" hasOnlySubstanceUnits="true" id="M_flxso_c" metaid="_140e86df-cba4-483b-8e4d-ea8c89da50a2" name="M_flxso_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H51O8P1" hasOnlySubstanceUnits="true" id="M_pa120_c" metaid="a35ecd9e-5d62-4720-9a48-86c83d293bd9" name="1_2_didodecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H51O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="O3S2" hasOnlySubstanceUnits="true" id="M_tsul_c" metaid="d5bf1430-b236-471e-bffd-330ad08312c6" name="Thiosulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N2O2" hasOnlySubstanceUnits="true" id="M_lys_L_c" metaid="fa6e293e-3fc4-40c4-b78f-a3ceef2b3e7d" name="L_Lysine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N2O2" hasOnlySubstanceUnits="true" id="M_lys_L_e" metaid="_4ea2de50-4355-4717-98d8-2977165565eb" name="L_Lysine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="O3S2" hasOnlySubstanceUnits="true" id="M_tsul_e" metaid="b17c51b1-e8d8-4454-8a75-5cac7f4af518" name="Thiosulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="HO3P" hasOnlySubstanceUnits="true" id="M_ppt_p" metaid="f0b9118e-7dd4-4e5b-a9a9-1599f516994b" name="M_ppt_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HO3P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4O5" hasOnlySubstanceUnits="true" id="M_akg_c" metaid="ef5bb962-1082-46f1-90e2-7b6c96207e48" name="2_Oxoglutarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O15P3" hasOnlySubstanceUnits="true" id="M_xtp_c" metaid="_4c1d2621-fb1a-4c64-96df-a2c128dc8ed0" name="XTP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O15P3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H8N2O2" hasOnlySubstanceUnits="true" id="M_acybut_c" metaid="_409ab852-6cdf-4bd0-a2b1-99105412ba43" name="gamma_Amino_gamma_cyanobutanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H8N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9NOR" hasOnlySubstanceUnits="true" id="M_protrna_c" metaid="_12a0bbef-367e-4a3f-a6ce-427bceda6fd3" name="L_Prolyl_tRNA_Pro_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="O3S2" hasOnlySubstanceUnits="true" id="M_tsul_p" metaid="_3b16619b-907b-45e5-a6da-20824985c4e5" name="Thiosulfate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: O3S2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H39N4O16" hasOnlySubstanceUnits="true" id="M_scl_c" metaid="c7883cb2-fde3-45fa-91b6-770f6b03edcb" name="sirohydrochlorin" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H39N4O16</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H8O5" hasOnlySubstanceUnits="true" id="M_3c4mop_c" metaid="d5d937ae-07a7-41fa-a701-79824c479f48" name="3_Carboxy_4_methyl_2_oxopentanoate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H8O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H13N2O11P2" hasOnlySubstanceUnits="true" id="M_dtdp_c" metaid="eb377850-c371-43a8-9858-d993a35f49e9" name="dTDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H13N2O11P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H15N2O2" hasOnlySubstanceUnits="true" id="M_lys_L_p" metaid="_2e07cfe9-2dca-49f6-b2a4-e17cae15f282" name="L_Lysine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H15N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4O5" hasOnlySubstanceUnits="true" id="M_akg_e" metaid="_6411d276-b49e-4441-9c4c-c94102396cce" name="2_Oxoglutarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H12N2O5P" hasOnlySubstanceUnits="true" id="M_pyam5p_c" metaid="f650fd4e-8782-49c2-bda0-c40585363fee" name="Pyridoxamine_5__phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H12N2O5P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NOR" hasOnlySubstanceUnits="true" id="M_alatrna_c" metaid="e56d57ec-8f7a-440b-a12b-6e4631b95919" name="L_Alanyl_tRNA_Ala_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H4O5" hasOnlySubstanceUnits="true" id="M_akg_p" metaid="a67f052f-35bd-43c1-adb8-4e43508bf222" name="2_Oxoglutarate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H4O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C29H46N7O17P3S" hasOnlySubstanceUnits="true" id="M_occoa_c" metaid="_0f007fc3-d373-4035-a2a1-4ea49468e43a" name="Octanoyl_CoA__n_C8_0CoA_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C29H46N7O17P3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H10O12P2" hasOnlySubstanceUnits="true" id="M_tagdp_D_c" metaid="_894c8e6c-31b5-4de0-bf03-4652ee16400b" name="D_Tagatose_1_6_biphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H10O12P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H33N2O10PRS" hasOnlySubstanceUnits="true" id="M_pmeACP_c" metaid="db986ad5-99cc-40d9-9744-16526c914d14" name="Pimeloyl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H33N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O8P" hasOnlySubstanceUnits="true" id="M_imp_c" metaid="d69bee01-9927-4531-8711-2d454cad6a4a" name="IMP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H20N6O5Se" hasOnlySubstanceUnits="true" id="M_seahcys_c" metaid="_4258087e-c242-4d51-9ebb-48744feb508d" name="Se_Adenosylselenohomocysteine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H20N6O5Se</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H82O10P1" hasOnlySubstanceUnits="true" id="M_pg180_c" metaid="_96c00e78-4cd1-43d7-8325-80821e27a87e" name="Phosphatidylglycerol__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H82O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H33N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ooctACP_c" metaid="c85f425a-ae23-4a02-b515-8ba08eda764e" name="3_Oxooctanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H33N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H29N2O11PRS" hasOnlySubstanceUnits="true" id="M_hgmeACP_c" metaid="_6e93e55a-7e7f-4345-9c06-863a26d45a85" name="3_Hydroxyglutaryl__acyl_carrier_protein__methyl_ester" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H29N2O11PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H17O7P2" hasOnlySubstanceUnits="true" id="M_grdp_c" metaid="_49fb8505-c10b-486b-82f3-5692426ba994" name="Geranyl_diphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H17O7P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H23N5O16P2" hasOnlySubstanceUnits="true" id="M_gdpmann_c" metaid="de438222-54cc-4726-952e-75035bf84528" name="GDP_D_mannose" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H23N5O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H3O3" hasOnlySubstanceUnits="true" id="M_pyr_p" metaid="c4099479-3078-4c0b-8bff-7948647ffa56" name="Pyruvate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HS2R" hasOnlySubstanceUnits="true" id="M_iscssh_c" metaid="_5ba18a87-4bba-4353-95f1-513b68844dfa" name="IscS_with_bound_sulfur" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HS2R</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H12O13P2" hasOnlySubstanceUnits="true" id="M_s17bp_c" metaid="dba98b8f-c61e-49d1-a284-4714f266848d" name="M_s17bp_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H12O13P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C42H82O10P1" hasOnlySubstanceUnits="true" id="M_pg180_p" metaid="_6bd73a39-fbae-4d25-bdc5-5fd6441fda1d" name="Phosphatidylglycerol__dioctadecanoyl__n_C18_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C42H82O10P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H47N2O8PRS" hasOnlySubstanceUnits="true" id="M_myrsACP_c" metaid="df44ad25-ac95-45d0-9647-879f707a7471" name="Myristoyl_ACP__n_C14_0ACP_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H47N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C38H56N8O27P2" hasOnlySubstanceUnits="true" id="M_um4p_c" metaid="a0d3e7b3-1f92-41ea-8f6c-ba87600e87fb" name="UDP_N_acetylmuramoyl_L_alanyl_D_gamma_glutamyl_meso_2_6_diaminopimelate_D_alanine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C38H56N8O27P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C8H14NO9P" hasOnlySubstanceUnits="true" id="M_acgam6p_c" metaid="dc2c18e5-6558-4019-ad49-1e3b80ebef8c" name="N_Acetyl_D_glucosamine_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C8H14NO9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="XH2" hasOnlySubstanceUnits="true" id="M_dsbgrd_p" metaid="eff717fd-49e3-488e-8606-499039426a48" name="M_dsbgrd_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: XH2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_leu_L_p" metaid="_815c4d68-bc29-42b2-aee9-6e71f5fd471e" name="L_Leucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="AsO4" hasOnlySubstanceUnits="true" id="M_aso4_c" metaid="e0a1b8f9-6211-4b7a-b8bb-01cd95f33365" name="Arsenate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: AsO4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="X" hasOnlySubstanceUnits="true" id="M_dsbcox_p" metaid="_20ca6384-7107-4748-920a-e081ce8740bf" name="protein_disulfide_isomerase_II__oxidized_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: X</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_D_c" metaid="_1d0c9062-4b33-4ade-836b-0f41149578d2" name="M_cys_D_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C81H148O17P2" hasOnlySubstanceUnits="true" id="M_clpn181_p" metaid="_1c51d3b9-7219-4a23-a8cd-4d419ce90c58" name="cardiolipin__tetraoctadec_11_enoyl__n_C18_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C81H148O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_D_e" metaid="b01d433a-64f0-4020-a983-b8e0634c2f39" name="M_cys_D_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5NO4S" hasOnlySubstanceUnits="true" id="M_3sala_c" metaid="_63991681-2ab2-40a1-8153-0d0cfba427e9" name="M_3sala_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5NO4S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_leu_L_e" metaid="_567f5eb0-dc47-4e7a-853f-e3754d6e0810" name="L_Leucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H18N2O16P2" hasOnlySubstanceUnits="true" id="M_udpLa4o_c" metaid="_73df25c6-e744-404d-a867-5f34259d0693" name="M_udpLa4o_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H18N2O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C35H64O5" hasOnlySubstanceUnits="true" id="M_12dgr161_p" metaid="_82d8a338-3515-4257-84e3-2e9c6b224bb1" name="M_12dgr161_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C35H64O5</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H13NO2" hasOnlySubstanceUnits="true" id="M_leu_L_c" metaid="b0ac6125-caf8-4276-8069-6f5d009bead4" name="L_Leucine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H13NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C7H5N" hasOnlySubstanceUnits="true" id="M_bzonit_c" metaid="_75292c17-90aa-4b78-9352-2043ad74c04d" name="Benzonitrile" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C7H5N</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H8N3O4P" hasOnlySubstanceUnits="true" id="M_4ampm_c" metaid="_26c01e93-50ec-4b08-a1e1-191ffe0bc728" name="4_Amino_2_methyl_5_phosphomethylpyrimidine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H8N3O4P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H29N2O12" hasOnlySubstanceUnits="true" id="M_anhgm_c" metaid="_77e3b37d-7cba-4b89-94ee-8fd98c3abce5" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramic_acid" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H29N2O12</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H126N2O37P2" hasOnlySubstanceUnits="true" id="M_kdo2lipid4_XF_c" metaid="_60e9bc22-f9f6-4f58-8f58-98f644ba003f" name="M_kdo2lipid4_XF_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H126N2O37P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C74H114N14O40" hasOnlySubstanceUnits="true" id="M_murein5p3p_p" metaid="d096ffe1-da0f-4e1d-bd61-620f8fd34348" name="two_linked_disacharide_pentapeptide_and_tripeptide_murein_units__uncrosslinked__middle_of_chain_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C74H114N14O40</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N4O11P2" hasOnlySubstanceUnits="true" id="M_idp_c" metaid="_621697eb-74bf-4ad1-885c-c3c9cebb13c7" name="IDP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N4O11P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H6NO2" hasOnlySubstanceUnits="true" id="M_1pyr5c_c" metaid="_5a7d2518-c748-4b90-b2ee-4e14720b3e61" name="1_Pyrroline_5_carboxylate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H6NO2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H126N2O37P2" hasOnlySubstanceUnits="true" id="M_kdo2lipid4_XF_e" metaid="f14e0454-e072-40c1-879e-1965b3ff0fc7" name="M_kdo2lipid4_XF_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H126N2O37P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H13NO9P" hasOnlySubstanceUnits="true" id="M_pran_c" metaid="_51841d19-27f5-4c5a-b36c-f035d475c09d" name="N__5_Phospho_D_ribosyl_anthranilate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H13NO9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C5H9O8P" hasOnlySubstanceUnits="true" id="M_xu5p_D_c" metaid="_907b93b7-6be0-44dd-9165-b1bc108b8e60" name="D_Xylulose_5_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C5H9O8P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C14H22N2O10PRS" hasOnlySubstanceUnits="true" id="M_malACP_c" metaid="e3f679de-fe9b-4b89-93ca-4d57782a66e6" name="Malonyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C14H22N2O10PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H3O3" hasOnlySubstanceUnits="true" id="M_msa_c" metaid="_0d762fd3-71c4-4529-b200-7bc4f8b1f35b" name="Malonate_semialdehyde" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H3O3</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H5O6P" hasOnlySubstanceUnits="true" id="M_dhap_c" metaid="df0429d8-48ee-4ebd-8476-05f607e62cfb" name="Dihydroxyacetone_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H5O6P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O7" hasOnlySubstanceUnits="true" id="M_cit_c" metaid="_83a1b111-befa-49a2-84c4-ab6eb3cb52af" name="Citrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C19H29N2O12" hasOnlySubstanceUnits="true" id="M_anhgm_p" metaid="e768bf82-dfbd-493b-b2b8-fd48dd4b3921" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramic_acid" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C19H29N2O12</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C20H24N10O19P4" hasOnlySubstanceUnits="true" id="M_ap4a_c" metaid="_51621837-3db4-461c-ba68-daa702e55f16" name="P1_P4_Bis_5__adenosyl__tetraphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C20H24N10O19P4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5N2O2" hasOnlySubstanceUnits="true" id="M_urcan_c" metaid="_5c743639-01c9-4034-88a4-fd1a3a711f30" name="Urocanate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O7" hasOnlySubstanceUnits="true" id="M_cit_e" metaid="_1e3735ba-e736-42df-8d6f-8a9542a04881" name="Citrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H126N2O37P2" hasOnlySubstanceUnits="true" id="M_kdo2lipid4_XF_p" metaid="_865f8957-d223-4884-b75c-07b819961598" name="M_kdo2lipid4_XF_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H126N2O37P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C34H38N4O4" hasOnlySubstanceUnits="true" id="M_pppg9_c" metaid="a39d6345-6a0d-4358-9088-cf1204117095" name="Protoporphyrinogen_IX" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C34H38N4O4</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H122O61" hasOnlySubstanceUnits="true" id="M_14aglucan_e" metaid="_43ccbf86-2d88-499a-9f01-2dd79b4d4a79" name="M_14aglucan_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H122O61</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H122O61" hasOnlySubstanceUnits="true" id="M_14aglucan_c" metaid="_5749ed56-6e05-4901-9b4b-b5dfee5733c8" name="1_4_alpha_D_Glucosyl_n" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H122O61</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C2H5NOR" hasOnlySubstanceUnits="true" id="M_glytrna_c" metaid="_4a83b6ff-cd79-43e3-8aa4-8e0d9bfde226" name="Glycyl_tRNA_Gly_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C2H5NOR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H49N2O8PRS" hasOnlySubstanceUnits="true" id="M_hdeACP_c" metaid="da832ba9-9348-4a4b-9fcf-8128e12a24f7" name="cis_hexadec_9_enoyl__acyl_carrier_protein___n_C16_1_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H49N2O8PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H12N5O9P2" hasOnlySubstanceUnits="true" id="M_dadp_c" metaid="_0ea2039b-4061-4345-8af5-ada4eac793ec" name="dADP" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H12N5O9P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C72H122O61" hasOnlySubstanceUnits="true" id="M_14aglucan_p" metaid="_906cd203-bd17-4164-9158-fbbed1e862ac" name="M_14aglucan_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C72H122O61</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H5O7" hasOnlySubstanceUnits="true" id="M_cit_p" metaid="d14e510b-4acd-44f7-88e3-d883529a9812" name="Citrate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H5O7</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O2" hasOnlySubstanceUnits="true" id="M_hxa_c" metaid="efbea65b-9d47-4614-8b70-9ca95f446dc9" name="Hexanoate__n_C6_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnatyr_c" metaid="_1bd65fd4-64bf-4feb-a711-1460105a0c36" name="tRNA_Tyr_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="CH3O3S" hasOnlySubstanceUnits="true" id="M_mso3_e" metaid="fa3f8603-57c4-4e14-a648-8cd4efaddbc4" name="methanesulfonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH3O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="CH3O3S" hasOnlySubstanceUnits="true" id="M_mso3_c" metaid="ee1ab707-2158-424d-9184-aae220a5e737" name="methanesulfonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH3O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4N2O2" hasOnlySubstanceUnits="true" id="M_ura_c" metaid="c46235c5-0aa5-444e-83e7-94c55e9f4e91" name="Uracil" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H27N2O14P" hasOnlySubstanceUnits="true" id="M_chtbs6p_c" metaid="_9bdd4880-3d07-4a9a-a72b-5cef7fac4128" name="M_chtbs6p_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H27N2O14P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H25N3O17P2" hasOnlySubstanceUnits="true" id="M_uacgam_c" metaid="b30f5402-fc0a-4542-81ec-6eb62f3d22d1" name="UDP_N_acetyl_D_glucosamine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H25N3O17P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4N2O2" hasOnlySubstanceUnits="true" id="M_ura_e" metaid="ccfc70ef-41a5-42a6-81c1-b46663f039d8" name="M_ura_e" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C17H25N3O16P2" hasOnlySubstanceUnits="true" id="M_udpacfuc_c" metaid="d3296540-f850-4c00-8d52-8a6584778037" name="M_udpacfuc_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C17H25N3O16P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O2" hasOnlySubstanceUnits="true" id="M_hxa_p" metaid="aabefeb0-b032-4613-90e2-50e217087b0b" name="Hexanoate__n_C6_0_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="CH3O3S" hasOnlySubstanceUnits="true" id="M_mso3_p" metaid="a6f41b1d-5495-4a4a-81c6-a2f8f207215c" name="methanesulfonate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: CH3O3S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H4N2O2" hasOnlySubstanceUnits="true" id="M_ura_p" metaid="_8bdfb689-18da-4a6b-8278-2a2c65065ca6" name="M_ura_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H4N2O2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H59O8P1" hasOnlySubstanceUnits="true" id="M_pa140_c" metaid="_5a4391db-b9ee-403d-bbbf-69573a3f3e23" name="1_2_ditetradecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H59O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C10H11N5O10P2" hasOnlySubstanceUnits="true" id="M_pap_c" metaid="_6eda61d5-8a33-4a54-b717-9f489f619aca" name="Adenosine_3__5__bisphosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C10H11N5O10P2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="HR" hasOnlySubstanceUnits="true" id="M_trnapro_c" metaid="_6922d10c-bdf3-4ac4-9008-42f8753800e1" name="tRNA_Pro_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: HR</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C3H7NO2S" hasOnlySubstanceUnits="true" id="M_cys_D_p" metaid="_4824fa5f-73d8-45e7-b781-7d9390953608" name="M_cys_D_p" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C3H7NO2S</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H14N2" hasOnlySubstanceUnits="true" id="M_ptrc_c" metaid="c453ad0a-9c46-44c6-99fc-d1a00c8a4979" name="Putrescine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H14N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H14N2" hasOnlySubstanceUnits="true" id="M_ptrc_e" metaid="_9a6a8e7b-11d7-443a-a435-e3864359232b" name="Putrescine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H14N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C12H16N4O4PS" hasOnlySubstanceUnits="true" id="M_thmmp_c" metaid="_13decc39-a41f-4a2e-a73a-36731e84d6d0" name="Thiamin_monophosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C12H16N4O4PS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C27H47N2O9PRS" hasOnlySubstanceUnits="true" id="M_3ocpalm9eACP_c" metaid="_0884f9ed-92ea-4902-b209-cc1a46219385" name="3_oxo_cis_palm_9_eoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C27H47N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C6H11O9P" hasOnlySubstanceUnits="true" id="M_g6p_c" metaid="c4353cf2-27e9-4c56-b9ac-e5ee8c23e8dc" name="D_Glucose_6_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C6H11O9P</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C31H59O8P1" hasOnlySubstanceUnits="true" id="M_pa140_p" metaid="_5d254239-e98b-4a67-bddc-19ff12646b0f" name="1_2_ditetradecanoyl_sn_glycerol_3_phosphate" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C31H59O8P1</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C25H47N2O9PRS" hasOnlySubstanceUnits="true" id="M_3hmrsACP_c" metaid="_70619344-3e7b-4386-bb9f-0daba264f997" name="R__3_Hydroxytetradecanoyl__acyl_carrier_protein_" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C25H47N2O9PRS</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="p" constant="false" fbc:charge="0" fbc:chemicalFormula="C4H14N2" hasOnlySubstanceUnits="true" id="M_ptrc_p" metaid="_86f3a98d-4598-4a29-85f5-f393f0e6e519" name="Putrescine" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C4H14N2</p> + </body> + </notes> + </species> + <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" fbc:chemicalFormula="C16H21N5O15P2" hasOnlySubstanceUnits="true" id="M_gdp4d6dm_c" metaid="a954935d-5ef2-4be6-9881-cd849b42fd81" name="M_gdp4d6dm_c" sboTerm="SBO:0000240"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>formula: C16H21N5O15P2</p> + </body> + </notes> + </species> + </listOfSpecies> + <listOfParameters> + <parameter constant="true" id="UPPER_BOUND_99999_0" units="mmol_per_gDW_per_hr" value="99999"/> + <parameter constant="true" id="LOWER_BOUND_0_0" units="mmol_per_gDW_per_hr" value="0"/> + <parameter constant="true" id="LOWER_BOUND_99999_0" units="mmol_per_gDW_per_hr" value="-99999"/> + </listOfParameters> + <listOfReactions> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUPRT" metaid="_14369fd2-8f83-4ef5-a5bc-80f277a1cbbf" name="glutamine_phosphoribosyldiphosphate_amidotransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000770</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 2.4.2.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_14369fd2-8f83-4ef5-a5bc-80f277a1cbbf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000770"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pram_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG180abcpp" metaid="_309b13d3-cbb6-4182-ac1d-46340890b347" name="phosphatidylglycerol_transport_via_ABC_system__n_C18_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_309b13d3-cbb6-4182-ac1d-46340890b347"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg180_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HYXNtex" metaid="fc02e5bf-c6fd-48eb-8077-c7b72c8d14ea" name="Hypoxanthine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fc02e5bf-c6fd-48eb-8077-c7b72c8d14ea"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hxan_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hxan_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LEUtex" metaid="_4335a7b1-bbd5-44dd-9c9a-ebcc1fa9676b" name="L_leucine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4335a7b1-bbd5-44dd-9c9a-ebcc1fa9676b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_leu_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_leu_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METTRS" metaid="ad24d68c-cf9b-45ab-abd3-56446f8d42ed" name="Methionyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006950</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ad24d68c-cf9b-45ab-abd3-56446f8d42ed"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnamet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mettrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_glu_L_e" metaid="_80df0d73-fb34-4b1b-b43b-cb5a2bc7c012" name="R_EX_glu_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_80df0d73-fb34-4b1b-b43b-cb5a2bc7c012"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUCYS" metaid="_82876c4f-119d-442e-8003-fd0b8b8c557f" name="gamma_glutamylcysteine_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003340</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_82876c4f-119d-442e-8003-fd0b8b8c557f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glucys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRAMPC" metaid="e5b61c92-a688-4271-af80-91f6cc7df401" name="phosphoribosyl_AMP_cyclohydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020260</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 3.5.4.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e5b61c92-a688-4271-af80-91f6cc7df401"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_prbamp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_prfp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_VALtex" metaid="_0813fcbe-e60c-4afd-ab14-2197c512b3a7" name="L_valine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0813fcbe-e60c-4afd-ab14-2197c512b3a7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_val_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_val_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE141abcpp" metaid="d06025bc-2fe5-4f60-9f7f-554494955a65" name="phosphatidylethanolamine_transport_via_ABC_system__n_C14_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d06025bc-2fe5-4f60-9f7f-554494955a65"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pe141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe141_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_MEOH" metaid="_103d41e9-a0d8-48d4-998c-2885cb732810" name="R_DM_MEOH" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_103d41e9-a0d8-48d4-998c-2885cb732810"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_meoh_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CU2tex" metaid="c67872a0-b10c-4820-85dc-1079bd7171f9" name="copper__Cu_2__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c67872a0-b10c-4820-85dc-1079bd7171f9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cu2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cu2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYC3Ptex" metaid="_24207fcd-c1e8-4a47-9993-82ceb08ce6a3" name="sn_Glycerol_3_phosphate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24207fcd-c1e8-4a47-9993-82ceb08ce6a3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc3p_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SELGTHR" metaid="e1e2fe01-c3b9-4fa2-9d8c-63d260a5f5df" name="R_SELGTHR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e1e2fe01-c3b9-4fa2-9d8c-63d260a5f5df"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_slnt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_dgslnt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DXPS" metaid="_92a20d90-2d2e-469d-80f1-b4ef7ed6ae3a" name="1_deoxy_D_xylulose_5_phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020600</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.2.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_92a20d90-2d2e-469d-80f1-b4ef7ed6ae3a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020600"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DMPO_LACCASE" metaid="f394e9de-d142-4627-8a3e-83ae22843555" name="Dimethoxyphenol_oxidase_laccase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013090</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.10.3.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f394e9de-d142-4627-8a3e-83ae22843555"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.10.3.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013090"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dmoxpol_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tmoxdpq_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLTGY2pp" metaid="c93308b1-aad3-402b-a862-11afbb3fc3fd" name="murein_lytic_transglycosylase__murein4p3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_003940 ) OR ( XFCFBP8418_019770 )</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c93308b1-aad3-402b-a862-11afbb3fc3fd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019770"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4p3p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD160" metaid="_5ca3fed7-9650-46a3-b5f9-3d2379ccfba2" name="Phosphatidylserine_decarboxylase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ca3fed7-9650-46a3-b5f9-3d2379ccfba2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD60" metaid="_2f4d3818-add9-4c52-bc66-934853d16392" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C6_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2f4d3818-add9-4c52-bc66-934853d16392"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hhexACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thex2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_QULNS" metaid="_89adc41d-91eb-4b1f-9627-6c8c241e29f7" name="quinolinate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000540</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.72</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_89adc41d-91eb-4b1f-9627-6c8c241e29f7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.72"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iasp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_quln_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NADH16pp" metaid="_981fc70e-7cb2-49e3-a7b4-5f8349994de4" name="NADH_dehydrogenase__ubiquinone_8___3_protons___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025600 AND XFCFBP8418_025610 AND XFCFBP8418_025620 AND XFCFBP8418_025630 AND XFCFBP8418_025640 AND XFCFBP8418_025650 AND XFCFBP8418_025660 AND XFCFBP8418_025670 AND XFCFBP8418_025680 AND XFCFBP8418_025690 AND XFCFBP8418_025700 AND XFCFBP8418_025720 AND XFCFBP8418_025730</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 1.6.5.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_981fc70e-7cb2-49e3-a7b4-5f8349994de4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.6.5.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025700"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025600"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025650"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025660"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025610"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025620"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025730"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025640"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BHEXAMD" metaid="_1b6f2247-9e71-47cc-b8ad-f4b0ece10040" name="Beta_hexosaminidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_001510 ) OR ( XFCFBP8418_021350 )</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.52</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1b6f2247-9e71-47cc-b8ad-f4b0ece10040"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.52"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021350"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acgam_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MCITL2" metaid="_9ea3f7d5-e2ae-4c22-bad9-07e33c547b13" name="methylisocitrate_lyase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022790</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.1.3.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ea3f7d5-e2ae-4c22-bad9-07e33c547b13"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_micit_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PEtex" metaid="_2a13a352-80f4-40cc-8e34-d8de3874af53" name="glycero_3_phosphoethanolamine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2a13a352-80f4-40cc-8e34-d8de3874af53"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3pe_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3pe_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPK" metaid="_0f92d4f9-8ea4-4a3d-a6b8-2dbc86ec5f98" name="aspartate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020380</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 2.7.2.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0f92d4f9-8ea4-4a3d-a6b8-2dbc86ec5f98"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.2.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4pasp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD161" metaid="c09709b6-e435-448f-8a39-24621fed6636" name="Phosphatidylserine_decarboxylase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c09709b6-e435-448f-8a39-24621fed6636"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AKGt2rtex" metaid="adebd6ac-199d-4bb3-806c-78c44400a694" name="R_AKGt2rtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#adebd6ac-199d-4bb3-806c-78c44400a694"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_akg_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDEP4pp" metaid="_432105e1-fc64-4ad2-accf-a32b00339618" name="murein_D_D_endopeptidase__murein4px4px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_432105e1-fc64-4ad2-accf-a32b00339618"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein4px4px4p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4px4p4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G1PTT" metaid="_82e3a877-0072-405f-96d7-b5b8aee32c62" name="glucose_1_phosphate_thymidylyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026240</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.24</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_82e3a877-0072-405f-96d7-b5b8aee32c62"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.24"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dttp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dtdpglu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP120abcpp" metaid="_95955cb8-0c3d-4efc-b5d3-d271056c82c2" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C12_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_95955cb8-0c3d-4efc-b5d3-d271056c82c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp120_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPS" metaid="bf5b3eb0-b23b-46c6-93dd-4e37adc2cbb2" name="phosphoenolpyruvate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022440</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 2.7.9.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bf5b3eb0-b23b-46c6-93dd-4e37adc2cbb2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.9.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_2MAHMP" metaid="_0d3bc6e1-faff-4cdc-98ef-b3db11a2d1fe" name="2_Methyl_4_amino_5_hydroxymethylpyrimidine_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003250</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0d3bc6e1-faff-4cdc-98ef-b3db11a2d1fe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2mahmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ampm_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SULtex" metaid="d9cb977b-1ed7-46f2-880c-4b9e492145be" name="R_SULtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d9cb977b-1ed7-46f2-880c-4b9e492145be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_so4_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_so4_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPM" metaid="_3d261807-574e-441f-8141-b58af7afcbd4" name="R_PPM" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026200</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 5.4.2.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d261807-574e-441f-8141-b58af7afcbd4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_r1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ORNtpp" metaid="_97b03bc1-d9f6-42f5-9213-cbc5a80501c9" name="R_ORNtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007710</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97b03bc1-d9f6-42f5-9213-cbc5a80501c9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orn_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLCptspp" metaid="a5036fe0-e602-4b03-8a02-61ed7ee43202" name="R_GLCptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a5036fe0-e602-4b03-8a02-61ed7ee43202"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glc_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_URA_e" metaid="fd91adc6-3242-4c4f-873b-895cc743cf86" name="R_EX_URA_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fd91adc6-3242-4c4f-873b-895cc743cf86"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_ura_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_USHDXF" metaid="e9865075-87c4-4211-acd9-1e784b54ed83" name="R_USHDXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012350</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.1.2.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e9865075-87c4-4211-acd9-1e784b54ed83"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_u23ga_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_lipidX_XF_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASR" metaid="_6bb0e45a-0673-4f17-8b22-2d9261e8b641" name="R_ASR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_015110</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6bb0e45a-0673-4f17-8b22-2d9261e8b641"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015110"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_aso4_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_aso3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPBNGS" metaid="_202ef9f6-693d-4498-add8-ed21231eea8b" name="porphobilinogen_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019180</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.24</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_202ef9f6-693d-4498-add8-ed21231eea8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.24"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5aop_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppbng_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM3PApp" metaid="_25b1fdbc-6f3b-48a0-8511-cb128926cb1d" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide_amidase__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011590</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 3.5.1.28</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_25b1fdbc-6f3b-48a0-8511-cb128926cb1d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.28"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm3p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdap_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYC3Pabc" metaid="_28e0eb51-089b-40cc-b17e-e2a1f37062ae" name="R_GLYC3Pabc" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28e0eb51-089b-40cc-b17e-e2a1f37062ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACOAR" metaid="a31cc524-015e-4a3a-81b5-41ae0b05130c" name="acetoacetyl_CoA_reductase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025580</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.1.1.36</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a31cc524-015e-4a3a-81b5-41ae0b05130c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.36"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025580"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_aacoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_r3hbcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAAD" metaid="_49d1cf96-0b01-4869-91d6-edc4d3d3de31" name="D_Amino_acid_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010710</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 1.4.99.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49d1cf96-0b01-4869-91d6-edc4d3d3de31"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.99.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARD" metaid="d312bee4-2cbd-42d8-9bae-17ee32fee20c" name="R_ARD" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020240</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 1.13.11.53</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d312bee4-2cbd-42d8-9bae-17ee32fee20c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.53"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhmtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_mtpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA180abcpp" metaid="_5091b6e2-ef92-4479-8b11-9e1d4b778674" name="phosphatidate_transport_via_ABC_system__n_C18_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5091b6e2-ef92-4479-8b11-9e1d4b778674"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa180_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD80" metaid="_77926968-2528-4de7-9b9f-0f7c44626c73" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C8_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_77926968-2528-4de7-9b9f-0f7c44626c73"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hoctACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_toct2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP120pp" metaid="_6a689f43-ecf3-4264-b0e7-b714b4d7c095" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6a689f43-ecf3-4264-b0e7-b714b4d7c095"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp120_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg120_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYCtpp" metaid="f2bf7fbc-77d4-4531-aea8-6f578ae146df" name="glycerol_transport_via_channel__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020710</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f2bf7fbc-77d4-4531-aea8-6f578ae146df"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLNTRS" metaid="_49002df7-93bb-449e-b598-c830b9a5a437" name="Glutaminyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004140</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49002df7-93bb-449e-b598-c830b9a5a437"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004140"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnagln_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glntrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDP4KPS" metaid="a8dc7f00-c76a-4ac1-bc13-be9336ed82eb" name="UDP_4_keto_pentose_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020820</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.35</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a8dc7f00-c76a-4ac1-bc13-be9336ed82eb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.35"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpglcur_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp4kp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASNN" metaid="_4fbdee0a-5742-4787-a3e1-55709a4b4a7a" name="L_asparaginase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024050</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 3.5.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4fbdee0a-5742-4787-a3e1-55709a4b4a7a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_asn_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR40" metaid="_117d8d3d-f0b7-4778-91dd-c9a830f0490b" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C4_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_117d8d3d-f0b7-4778-91dd-c9a830f0490b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_actACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3haACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACOCMT" metaid="_66369825-8159-41b0-aef5-5421b139c375" name="R_ACOCMT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025290</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 2.1.3.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_66369825-8159-41b0-aef5-5421b139c375"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.3.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025290"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acorn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cbp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_accitr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOAT2XF" metaid="f302aa33-53e3-478f-adb3-5467cf4fb26a" name="R_MOAT2XF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015030</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.4.99.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f302aa33-53e3-478f-adb3-5467cf4fb26a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.99.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ckdo_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdolipid4_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipid4_XF_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPA" metaid="_5a29b271-98c0-4cfd-910c-c667f06ba935" name="inorganic_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_010630 ) OR ( XFCFBP8418_012360 ) OR ( XFCFBP8418_019680 )</p> + <p>SUBSYSTEM: Anaplerotic_Reactions</p> + <p>EC_NUMBER: 3.6.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5a29b271-98c0-4cfd-910c-c667f06ba935"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012360"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD140" metaid="_01dad332-1a3c-4153-8df5-b37ea27b2473" name="Phosphatidylserine_decarboxylase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01dad332-1a3c-4153-8df5-b37ea27b2473"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ps140_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TRPS3r" metaid="_60f46c0e-3148-4c43-8d24-e134cba85758" name="R_TRPS3r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003820 AND XFCFBP8418_003830</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_60f46c0e-3148-4c43-8d24-e134cba85758"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003830"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003820"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3ig3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_indole_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IPPS" metaid="_08649866-a11a-42f5-9c63-bc67e65b4fce" name="2_isopropylmalate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017930</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.3.3.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_08649866-a11a-42f5-9c63-bc67e65b4fce"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.3.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3mob_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3c3hmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLNS" metaid="bccbebed-11f0-42cd-a1d9-24cdac9ca01d" name="glutamine_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017710</p> + <p>SUBSYSTEM: Glutamate_Metabolism_</p> + <p>EC_NUMBER: 6.3.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bccbebed-11f0-42cd-a1d9-24cdac9ca01d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHTNA2" metaid="a33b4b51-cc6e-451d-8e71-4a5283381588" name="R_CHTNA2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010730</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a33b4b51-cc6e-451d-8e71-4a5283381588"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010730"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chitin_polymer_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_e" stoichiometry="49"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_chtbs_e" stoichiometry="50"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD141" metaid="_4e296aea-508c-400f-8105-5b544b9797ba" name="Phosphatidylserine_decarboxylase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4e296aea-508c-400f-8105-5b544b9797ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LYSabcpp" metaid="_051d2f7e-278f-4b19-81f8-746cc4f031ae" name="L_lysine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_051d2f7e-278f-4b19-81f8-746cc4f031ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lys_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_DAD_5" metaid="_49f56dfb-077f-4510-8638-b0fce0a1f7e3" name="R_DM_DAD_5" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49f56dfb-077f-4510-8638-b0fce0a1f7e3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dad_5_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_FOR" metaid="_2c90897c-1dc2-4313-847b-b063fec53fee" name="R_DM_FOR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2c90897c-1dc2-4313-847b-b063fec53fee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_for_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KARA1" metaid="b0cfc4f4-6093-446d-9500-4a3e2fc3316b" name="ketol_acid_reductoisomerase__2_3_dihydroxy_3_methylbutanoate_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017890</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.86</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b0cfc4f4-6093-446d-9500-4a3e2fc3316b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.86"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_23dhmb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_alac_S_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_4PCPpp" metaid="_7c20c035-8866-4746-b496-301120428604" name="R_4PCPpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7c20c035-8866-4746-b496-301120428604"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdapDala_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_LalaDgluMdap_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NAabcO" metaid="_90b16213-e7d2-411d-b1ed-0013b8613160" name="R_NAabcO" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021120 AND XFCFBP8418_021130</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_90b16213-e7d2-411d-b1ed-0013b8613160"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021130"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_na1_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_2KMBT" metaid="f1a1c730-db43-4466-a772-458b812137cd" name="R_2KMBT" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005040</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f1a1c730-db43-4466-a772-458b812137cd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005040"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2kmb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ogm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPTA" metaid="e95b15cd-248a-4abb-a36f-35144913809a" name="aspartate_aminotransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014480</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 2.6.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e95b15cd-248a-4abb-a36f-35144913809a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PAPSR" metaid="_94d10b09-024a-445a-8d66-a125d9fb50c2" name="R_PAPSR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_002720 ) OR ( XFCFBP8418_002720 AND XFCFBP8418_013260 )</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 1.8.4.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94d10b09-024a-445a-8d66-a125d9fb50c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002720"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_paps_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MI1PP" metaid="_0d316631-0afb-4f33-b35e-c64235d6181e" name="myo_inositol_1_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005240</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.3.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0d316631-0afb-4f33-b35e-c64235d6181e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mi1p_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_inost_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRtex" metaid="_539d49b0-6c42-4f0d-a4db-99cd9e9170ec" name="L_threonine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_539d49b0-6c42-4f0d-a4db-99cd9e9170ec"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thr_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_thr_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTPDPK" metaid="ad8b408e-94ae-44ef-9198-2abaf8be91de" name="GTP_diphosphokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004340</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.6.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ad8b408e-94ae-44ef-9198-2abaf8be91de"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.6.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdptp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IPDPS" metaid="ec6cff5d-8296-47ac-8a91-e527cab00288" name="1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_reductase__ipdp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004660</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.17.7.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ec6cff5d-8296-47ac-8a91-e527cab00288"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.7.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004660"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2mb4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ipdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THZPSN3" metaid="_79d778ee-f268-475b-904d-75de8270c000" name="R_THZPSN3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011380</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.8.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79d778ee-f268-475b-904d-75de8270c000"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhgly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iscssh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_iscs_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4mpetz_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGDC" metaid="fa70a149-fa80-4865-a57a-8ec9bf0cab35" name="arginine_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015380</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 4.1.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fa70a149-fa80-4865-a57a-8ec9bf0cab35"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_agm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CPH4S" metaid="a3fa9d7a-5460-4c20-ad12-9d3ba1c2f250" name="6_carboxy_5_6_7_8_tetrahydropterin_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015860</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.2.50</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a3fa9d7a-5460-4c20-ad12-9d3ba1c2f250"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.50"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015860"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ahdt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acald_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cph4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FGLU" metaid="_81c035f4-7607-4bb9-b2c0-a35fed0105e0" name="formimidoylglutamase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 3.5.3.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_81c035f4-7607-4bb9-b2c0-a35fed0105e0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.3.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_forglu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_frmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYTRS" metaid="_7606a995-7800-4ec6-abe8-9acad743b6ef" name="Glycyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000870 AND XFCFBP8418_000880</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7606a995-7800-4ec6-abe8-9acad743b6ef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000880"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000870"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnagly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glytrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FEENTERtonex" metaid="_12a36d85-5cbd-4a3e-b15f-500bd8fa2600" name="R_FEENTERtonex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_014300 ) OR ( No_Assignment AND XFCFBP8418_014310 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_12a36d85-5cbd-4a3e-b15f-500bd8fa2600"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014300"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014310"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_feenter_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_feenter_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MALS" metaid="_91b2e54f-265a-45e4-a8de-d215e3c74426" name="malate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Anaplerotic_Reactions</p> + <p>EC_NUMBER: 2.3.3.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_91b2e54f-265a-45e4-a8de-d215e3c74426"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.3.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glx_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mal_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_14GLUCANabcpp" metaid="c89c8704-8b34-431c-a0b6-f45ed6f5893b" name="R_14GLUCANabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND No_Assignment2 AND XFCFBP8418_004950 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c89c8704-8b34-431c-a0b6-f45ed6f5893b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment2"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004950"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_14aglucan_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_14aglucan_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FRUtex" metaid="d305996b-e7c1-40e5-bfa7-0ae4b7bf8e4a" name="D_fructose_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d305996b-e7c1-40e5-bfa7-0ae4b7bf8e4a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fru_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fru_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BTS5" metaid="d6e0e695-c2ba-4aa1-b31c-6a06dfa60da2" name="Biotin_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014650</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.8.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d6e0e695-c2ba-4aa1-b31c-6a06dfa60da2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dtbt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2fe2s_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dad_5_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_btn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2fe1s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDCPDPpp" metaid="edf59a77-9d26-46f1-ab8e-1da894ac3f51" name="undecaprenyl_diphosphatase__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017720</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.6.1.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#edf59a77-9d26-46f1-ab8e-1da894ac3f51"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpdp_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_udcpp_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MTRI" metaid="_6fb97570-f876-42d0-87aa-3dd19fb12fc0" name="R_MTRI" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012050</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 5.3.1.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6fb97570-f876-42d0-87aa-3dd19fb12fc0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5mdr1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5mdru1p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Niabcpp" metaid="_6d7bcd38-06ed-4a02-83d8-9a04a3cdf12b" name="R_Niabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 3.6.3.24</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6d7bcd38-06ed-4a02-83d8-9a04a3cdf12b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.24"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ni2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ni2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDEP1pp" metaid="_2ee3178f-cd5c-46ed-957e-64b4d013309c" name="murein_L_D_endopeptidase__murein3px3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2ee3178f-cd5c-46ed-957e-64b4d013309c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein3px3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein3p3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THDPS" metaid="_4c9752db-6ac6-41d6-ac69-c036ee50633f" name="tetrahydrodipicolinate_succinylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015100</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 2.3.1.117</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4c9752db-6ac6-41d6-ac69-c036ee50633f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.117"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_succoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_sl2a6o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR60" metaid="_161e1c42-26df-4803-9482-c44d8809627b" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C6_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_161e1c42-26df-4803-9482-c44d8809627b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ohexACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hhexACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KARA2" metaid="_7137640b-08fb-4d48-a493-848e538f96e4" name="ketol_acid_reductoisomerase__2_Acetolactate_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017890</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.86</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7137640b-08fb-4d48-a493-848e538f96e4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.86"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ahbut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_23dhmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL60t2pp" metaid="_8114a03e-0693-4d24-b01b-0073a5bdf075" name="fatty_acid_CoA_ligase__hexanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8114a03e-0693-4d24-b01b-0073a5bdf075"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hxa_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hxcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_14GLUCANtex" metaid="_6fad67d1-09ba-4d18-95e0-5bf1cc1498b7" name="R_14GLUCANtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6fad67d1-09ba-4d18-95e0-5bf1cc1498b7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_14aglucan_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_14aglucan_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD120" metaid="_76125732-dfb4-4bed-a454-8c2ed827159b" name="Phosphatidylserine_decarboxylase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76125732-dfb4-4bed-a454-8c2ed827159b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps120_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe120_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CD2t3pp" metaid="_6a6be6f5-942a-4c62-acf5-19dfca4f0912" name="cadmium__Cd_2__transport_out_via_proton_antiport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010570</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6a6be6f5-942a-4c62-acf5-19dfca4f0912"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cd2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cd2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TRPTRS" metaid="_40319eaf-9e30-43a6-8522-e4712915748d" name="Tryptophanyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007540</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_40319eaf-9e30-43a6-8522-e4712915748d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnatrp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trp_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trptrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INSTtex" metaid="cdc4a2be-7fbd-47c8-bbc2-eee17a32869f" name="inositol_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cdc4a2be-7fbd-47c8-bbc2-eee17a32869f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_inost_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_inost_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPT" metaid="ac1bd227-b716-4bab-8df7-0a75519b747f" name="R_ASPT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002100</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 4.3.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac1bd227-b716-4bab-8df7-0a75519b747f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SERTRS" metaid="f804cee3-3765-4d25-9e4a-ea4f4f6cadb3" name="Seryl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020870</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f804cee3-3765-4d25-9e4a-ea4f4f6cadb3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaser_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sertrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGCDr" metaid="e85307f9-e4f6-4d24-9b95-facdb10b26c3" name="phosphoglycerate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020190</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.95</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e85307f9-e4f6-4d24-9b95-facdb10b26c3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.95"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020190"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3pg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3php_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NOVBCNtpp" metaid="_5ca19ded-359b-4743-946b-f3d0123a11cc" name="Novobiocin_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ca19ded-359b-4743-946b-f3d0123a11cc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_novbcn_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_novbcn_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROTRS" metaid="_38f0455e-f7aa-40da-b02b-4a5a0eef5801" name="Prolyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007370</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_38f0455e-f7aa-40da-b02b-4a5a0eef5801"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnapro_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_protrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DUTPDP" metaid="_33f29952-a3e2-4221-b99e-dd06006a5693" name="dUTP_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015440</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_33f29952-a3e2-4221-b99e-dd06006a5693"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dutp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDRPDr" metaid="_3db595ad-5b6f-402f-b8aa-1e235cb8fd82" name="R_MDRPDr" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020230</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 4.2.1.109</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3db595ad-5b6f-402f-b8aa-1e235cb8fd82"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.109"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020230"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5mdru1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dkmpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD40" metaid="_37eaf0db-57f8-422f-922e-522d13770c11" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C4_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_37eaf0db-57f8-422f-922e-522d13770c11"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3haACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_but2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADSK" metaid="_85d5b406-f57f-4a73-a44b-6d017b59b2cf" name="adenylyl_sulfate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002680</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 2.7.1.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_85d5b406-f57f-4a73-a44b-6d017b59b2cf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_aps_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_paps_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS120pp" metaid="ffa558f1-d74d-4319-8b63-06f62ee79683" name="cardiolipin_synthase__periplasmic__n_C12_0_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ffa558f1-d74d-4319-8b63-06f62ee79683"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg120_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_clpn120_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MCTP2App" metaid="dd16bec1-cf8a-4c14-bab2-2885cf18c2f2" name="murein_crosslinking_transpeptidase_1A__A2pm__D_ala___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004370 ) OR ( XFCFBP8418_008630 ) OR ( XFCFBP8418_010420 ) OR ( XFCFBP8418_011310 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dd16bec1-cf8a-4c14-bab2-2885cf18c2f2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004370"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011310"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p5p5p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="2"/> + <speciesReference constant="true" species="M_murein5px4px4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NOtex" metaid="_126d4486-6fa6-4692-86ce-1a5e2e9b50cb" name="nitric_oxide_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_126d4486-6fa6-4692-86ce-1a5e2e9b50cb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_no_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_no_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Mntex" metaid="_9278d2b5-4c10-4130-b169-9dbfd6a40161" name="R_Mntex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9278d2b5-4c10-4130-b169-9dbfd6a40161"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mn2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mn2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADSS" metaid="df3e285e-9030-481d-8b06-a7ffb62ea79f" name="adenylosuccinate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007280</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#df3e285e-9030-481d-8b06-a7ffb62ea79f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007280"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dcamp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPt2_2pp" metaid="_0cc2f9de-5d1d-4e44-ad6b-89dda6af0c75" name="R_ASPt2_2pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025480</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0cc2f9de-5d1d-4e44-ad6b-89dda6af0c75"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + <speciesReference constant="true" species="M_asp_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALATA_L" metaid="f85ea233-7154-4528-9ab6-5937dd7ca44a" name="L_alanine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004540</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 2.6.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f85ea233-7154-4528-9ab6-5937dd7ca44a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DADK" metaid="_235f4e1e-11ac-4a32-a0a9-c87385ecabab" name="deoxyadenylate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026070</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_235f4e1e-11ac-4a32-a0a9-c87385ecabab"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_damp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dadp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SOTA" metaid="b07c5ae3-e117-4a7c-814f-c83d7c3e8d21" name="R_SOTA" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003360</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.6.1.81</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b07c5ae3-e117-4a7c-814f-c83d7c3e8d21"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.81"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_sucorn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sucgsa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOHMT" metaid="_30aa2606-8808-4ee6-b4d3-e1953050bd8d" name="3_methyl_2_oxobutanoate_hydroxymethyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026560</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.2.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_30aa2606-8808-4ee6-b4d3-e1953050bd8d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026560"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3mob_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2dhp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ABUTtex" metaid="_19670ffc-772f-4621-82ba-26b98dad7052" name="4_aminobutyrate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_19670ffc-772f-4621-82ba-26b98dad7052"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4abut_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4abut_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGDC_r" metaid="eec6cf3f-516d-4536-ad2a-73e98b8c0ef7" name="R_AGDC_r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003030</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.5.1.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eec6cf3f-516d-4536-ad2a-73e98b8c0ef7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gam6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DDCAtex" metaid="a4794958-bba0-4dc7-a430-957e7a1309f8" name="Fatty_acid__dodecanoate__transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a4794958-bba0-4dc7-a430-957e7a1309f8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ddca_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ddca_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAGAATXF" metaid="_92feb24f-ded7-468f-8410-4bc2fc8122be" name="R_UAGAATXF" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024900</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.129</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_92feb24f-ded7-468f-8410-4bc2fc8122be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.129"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uacgam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hdecACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_u3aga_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYALDtex" metaid="baa6d16a-533f-48ab-bb79-4bf53824fedf" name="R_GLYALDtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#baa6d16a-533f-48ab-bb79-4bf53824fedf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyald_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyald_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTP10" metaid="_251cd69f-59b0-4bbf-b9f8-66c81ff22528" name="R_NTP10" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006890</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_251cd69f-59b0-4bbf-b9f8-66c81ff22528"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_itp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_idp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RPI" metaid="_84ca884c-785c-4589-85e2-e29eef61eec5" name="ribose_5_phosphate_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001410</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 5.3.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_84ca884c-785c-4589-85e2-e29eef61eec5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001410"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ru5p_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PCabcpp" metaid="d99d80ac-fea2-4614-8aaa-d22c5dd79db6" name="sn_glycerol_3_phosphocholine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d99d80ac-fea2-4614-8aaa-d22c5dd79db6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DSBDR" metaid="_442b5b18-fb55-4449-85d6-4a8667c22950" name="DsbD_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_006350 ) OR ( XFCFBP8418_006350 AND XFCFBP8418_013260 )</p> + <p>SUBSYSTEM: Electron_transfer</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_442b5b18-fb55-4449-85d6-4a8667c22950"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006350"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006350"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbdox_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbdrd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_VALabcpp" metaid="_4d8072c0-c917-4e4e-a984-3634d31f3449" name="L_valine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4d8072c0-c917-4e4e-a984-3634d31f3449"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_val_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_val_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RPE" metaid="ff31b7d8-2c37-4322-b512-edbde18d8a5e" name="ribulose_5_phosphate_3_epimerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026760</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 5.1.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ff31b7d8-2c37-4322-b512-edbde18d8a5e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026760"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ru5p_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xu5p_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ANS" metaid="_32366fd1-5082-48d5-9646-3b28a7410c5b" name="anthranilate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000460 AND XFCFBP8418_026730</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_32366fd1-5082-48d5-9646-3b28a7410c5b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026730"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_chor_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anth_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RBP4E" metaid="_5779744d-e37e-46e1-9e95-8626d440d7cd" name="R_RBP4E" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5779744d-e37e-46e1-9e95-8626d440d7cd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ru5p_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xu5p_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASNS1" metaid="_7696c780-6ae3-4c99-bea7-10c42051dcf3" name="asparagine_synthase__glutamine_hydrolysing_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015130</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 6.3.5.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7696c780-6ae3-4c99-bea7-10c42051dcf3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.5.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_asn_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METAT" metaid="_1a1c7d09-cd76-4de7-9a5d-34f2985e9750" name="methionine_adenosyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007840</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 2.5.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1a1c7d09-cd76-4de7-9a5d-34f2985e9750"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR80" metaid="_678394b3-e582-47f4-8c48-c9f82945157a" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C8_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_678394b3-e582-47f4-8c48-c9f82945157a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ooctACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hoctACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOATXF" metaid="_799bdd79-bad4-4a86-bf82-e735bb863477" name="R_MOATXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015030</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.4.99.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_799bdd79-bad4-4a86-bf82-e735bb863477"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.99.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ckdo_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lipidA_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdolipid4_XF_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PCtex" metaid="_0ca2baad-8ff8-4b02-ba9a-e729b34adff4" name="glycero_3_phosphocholine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ca2baad-8ff8-4b02-ba9a-e729b34adff4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3pc_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3pc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MINCYCtpp" metaid="_727f254d-6d71-41dc-bc05-174f23061000" name="Minocycline_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_727f254d-6d71-41dc-bc05-174f23061000"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mincyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mincyc_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IPMDr" metaid="b277d274-82b8-4a71-93f9-cdcfa5c407cf" name="3_isopropylmalate_dehydrogenase_reversible" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021500</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.85</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b277d274-82b8-4a71-93f9-cdcfa5c407cf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.85"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021500"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3c2hmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3c4mop_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SBPA" metaid="_48b9cc5a-09a5-43de-b499-b30b85b199b8" name="R_SBPA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011030</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_48b9cc5a-09a5-43de-b499-b30b85b199b8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_s17bp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_e4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FBP" metaid="_95eaacc1-00ea-4f90-8f6f-8f850fed1a29" name="fructose_bisphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_95eaacc1-00ea-4f90-8f6f-8f850fed1a29"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AOXSr2" metaid="_9400c890-2a59-4627-8ad7-0b5bd92d25c9" name="8_amino_7_oxononanoate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004000</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.47</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9400c890-2a59-4627-8ad7-0b5bd92d25c9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.47"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004000"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pimACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_8aonn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ORNtex" metaid="_30d623cd-3157-42a3-857b-b4161c1f0c44" name="ornithine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007710</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_30d623cd-3157-42a3-857b-b4161c1f0c44"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orn_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orn_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PIuabcpp" metaid="_7758ea08-9ec7-40bd-80df-08c4841b230d" name="phosphate_transport_via_ABC_system__uptake__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019420 AND XFCFBP8418_019430 AND XFCFBP8418_019440 AND XFCFBP8418_019450</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7758ea08-9ec7-40bd-80df-08c4841b230d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019430"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019440"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019450"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HSTPTr" metaid="_9e184f17-f727-4bc1-b67b-703973f1bb91" name="histidinol_phosphate_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020310</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9e184f17-f727-4bc1-b67b-703973f1bb91"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020310"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imacp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hisp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SERTRS2" metaid="d1db8a88-2e24-4a99-bfa5-e80896799f4d" name="Seryl_tRNA_synthetase__selenocystein_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020870</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d1db8a88-2e24-4a99-bfa5-e80896799f4d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnasecys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sertrna_sec_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_O2tex" metaid="c3700227-200a-4301-b3ac-fe1269c357f5" name="oxygen_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c3700227-200a-4301-b3ac-fe1269c357f5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_o2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUTRS" metaid="b8637038-f275-43b8-aa77-1e32c48fd80a" name="Glutamyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011070</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b8637038-f275-43b8-aa77-1e32c48fd80a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaglu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glutrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUTRR" metaid="_6633a907-f3e1-4193-98fb-693bd2edb998" name="glutamyl_tRNA_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012920</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 1.2.1.70</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6633a907-f3e1-4193-98fb-693bd2edb998"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.70"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012920"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glutrna_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu1sa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaglu_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FADRx2" metaid="_1a31ffcd-1cd7-4991-ac9c-75f24efdafd8" name="R_FADRx2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002700 AND XFCFBP8418_002710</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.5.1.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1a31ffcd-1cd7-4991-ac9c-75f24efdafd8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002710"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002700"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AKGt2rpp" metaid="_56babd7d-178d-4e30-bbe7-37be8f99c75c" name="2_oxoglutarate_reversible_transport_via_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014890</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_56babd7d-178d-4e30-bbe7-37be8f99c75c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDCP4pp" metaid="_4f680622-675b-4d0b-befc-1ac754cc150a" name="murein_D_D_carboxypeptidase__murein5p4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_018620 ) OR ( XFCFBP8418_020420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.16.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4f680622-675b-4d0b-befc-1ac754cc150a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4p4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_GCALD" metaid="c82549a2-429a-4622-b277-a2d927e5780d" name="R_DM_GCALD" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c82549a2-429a-4622-b277-a2d927e5780d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gcald_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OCDCEAtexi" metaid="_308a73d2-096d-4b14-be3e-96175ac517ba" name="R_OCDCEAtexi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_308a73d2-096d-4b14-be3e-96175ac517ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocdcea_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ocdcea_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CMtpp" metaid="a13b6201-035d-4799-b18e-bf3f1fa52249" name="Chloramphenicol_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a13b6201-035d-4799-b18e-bf3f1fa52249"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_cm_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cm_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PMEACPE" metaid="_68a9ebb6-f1c6-44c4-a5c8-7dcee09ae7ba" name="Pimeloyl__ACP__methyl_ester_esterase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004010</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.1.85</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_68a9ebb6-f1c6-44c4-a5c8-7dcee09ae7ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.85"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004010"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_meoh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pimACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADK1" metaid="_49cdf00d-bed3-479b-b154-c0f5fb59388e" name="adenylate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026070</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49cdf00d-bed3-479b-b154-c0f5fb59388e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP140pp" metaid="_7a8ec943-7c19-4990-a3f3-03e43ff54b22" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7a8ec943-7c19-4990-a3f3-03e43ff54b22"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp140_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg140_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GRTT" metaid="_9978b685-ed01-4b71-bb18-16a6d0e1db8b" name="geranyltranstransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005980</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9978b685-ed01-4b71-bb18-16a6d0e1db8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ipdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_frdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUCtex" metaid="_6083e642-12b7-4961-a2ab-988dc5346324" name="R_FUCtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6083e642-12b7-4961-a2ab-988dc5346324"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fuc_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fuc_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM3PH" metaid="_5bcf5dcc-ce35-4973-8e5d-a3acbefbccb7" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tripeptide_beta__1_4_N_acetylglucosaminidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021350</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5bcf5dcc-ce35-4973-8e5d-a3acbefbccb7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhm3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYOX" metaid="baa53e94-4e56-4a8a-800d-80dc093d5834" name="hydroxyacylglutathione_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019610</p> + <p>SUBSYSTEM: Methylglyoxal_degradation</p> + <p>EC_NUMBER: 3.1.2.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#baa53e94-4e56-4a8a-800d-80dc093d5834"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019610"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lgt_S_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lac_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FBA" metaid="d57285eb-dacd-4631-8872-dbaec147930d" name="fructose_bisphosphate_aldolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011030</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 4.1.2.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d57285eb-dacd-4631-8872-dbaec147930d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DOXRBCNtpp" metaid="b12b499f-3972-4815-a88a-a9317ef5d311" name="Doxorubicin_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b12b499f-3972-4815-a88a-a9317ef5d311"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_doxrbcn_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_doxrbcn_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AP4AS" metaid="e2a33de6-8ba2-4520-9b91-68d823beb82f" name="R_AP4AS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023900</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e2a33de6-8ba2-4520-9b91-68d823beb82f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ap4a_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADK3" metaid="_3c33c4b5-38c9-4e55-a928-726c79ddb1d2" name="adentylate_kinase__GTP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026070</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3c33c4b5-38c9-4e55-a928-726c79ddb1d2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACOATA" metaid="d134947b-2d61-43dc-ad87-3586854783f4" name="Acetyl_CoA_ACP_transacylase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_017940</p> + <p>SUBSYSTEM: Membrane_Lipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.38</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d134947b-2d61-43dc-ad87-3586854783f4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.38"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017940"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADK4" metaid="d80fc4ec-a1a3-48fc-b5d9-663765d5ee43" name="adentylate_kinase__ITP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026070</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d80fc4ec-a1a3-48fc-b5d9-663765d5ee43"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_itp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_idp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_APRAUR" metaid="_70c48d46-da92-46e2-baa8-b8192e76e959" name="5_amino_6__5_phosphoribosylamino_uracil_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009790</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.193</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_70c48d46-da92-46e2-baa8-b8192e76e959"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.193"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5apru_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5aprbu_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S2FE2ST" metaid="d88fa6b4-43b9-414c-84e2-b3f14db7a4c3" name="R_S2FE2ST" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950 AND XFCFBP8418_012150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d88fa6b4-43b9-414c-84e2-b3f14db7a4c3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012150"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2fe2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LPADSSXF" metaid="c6e32931-814b-41c7-a454-7f0a8ecffa84" name="R_LPADSSXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.4.1.182</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c6e32931-814b-41c7-a454-7f0a8ecffa84"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.182"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_u23ga_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lipidX_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_lipidAds_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GDPDPK" metaid="d6fbd975-bf2e-4c02-a28a-48d1ab9741ae" name="GDP_diphosphokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004340 ) OR ( XFCFBP8418_008750 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.6.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d6fbd975-bf2e-4c02-a28a-48d1ab9741ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.6.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppgpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AICART" metaid="_743b940c-dc47-4773-af74-6f8f53223744" name="phosphoribosylaminoimidazolecarboxamide_formyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001030</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 2.1.2.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_743b940c-dc47-4773-af74-6f8f53223744"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_aicar_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fprica_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S2FE2SS" metaid="df79ddf3-b54a-400f-9ed3-c4a7a1293421" name="R_S2FE2SS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950 AND XFCFBP8418_002960 AND XFCFBP8418_025330</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#df79ddf3-b54a-400f-9ed3-c4a7a1293421"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufsesh_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="7"/> + <speciesReference constant="true" species="M_sufse_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S2FE2SR" metaid="ad865030-3d0f-46b0-ae92-d51f2fe675ea" name="R_S2FE2SR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950 AND XFCFBP8418_002960 AND XFCFBP8418_025330</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ad865030-3d0f-46b0-ae92-d51f2fe675ea"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufsesh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2fe1s_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="5"/> + <speciesReference constant="true" species="M_sufse_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MECDPDH5" metaid="_3dcaee8e-0581-4fd2-a58e-36c336cea301" name="R_MECDPDH5" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012250 AND XFCFBP8418_023100</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.17.7.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3dcaee8e-0581-4fd2-a58e-36c336cea301"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.7.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012250"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023100"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2mecdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_flxr_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2mb4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_flxso_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPNDH" metaid="_4504abff-43dd-4a5c-8d7d-c99bfd5232d8" name="prephenate_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021090</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4504abff-43dd-4a5c-8d7d-c99bfd5232d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021090"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pphn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phpyr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_COBALT2t3pp" metaid="_413f9a7c-17cb-4b24-a54b-9139a7907c2c" name="cobalt__Co_2__transport_out_via_proton_antiport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010570</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_413f9a7c-17cb-4b24-a54b-9139a7907c2c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cobalt2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cobalt2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MPTG2" metaid="ea8026d5-3079-404e-ae94-de7266c66bb9" name="murein_polymerizing_transglycosylase_2__three_linked_units_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004700 AND XFCFBP8418_008630 ) OR ( XFCFBP8418_004700 AND XFCFBP8418_010420 ) OR ( XFCFBP8418_004700 AND XFCFBP8418_020460 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ea8026d5-3079-404e-ae94-de7266c66bb9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010420"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uaagmda_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein5p5p5p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GAPD" metaid="b831af11-11e9-46cd-a767-98d8e6ae317b" name="glyceraldehyde_3_phosphate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007260</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 1.2.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b831af11-11e9-46cd-a767-98d8e6ae317b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_13dpg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PYK" metaid="_043c5f9c-0c78-4d01-b3a3-8e821cd2855f" name="pyruvate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011050</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 2.7.1.40</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_043c5f9c-0c78-4d01-b3a3-8e821cd2855f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.40"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_QUIN2tex" metaid="_31c3858e-2a09-490c-83ca-e7646693cc58" name="R_QUIN2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_31c3858e-2a09-490c-83ca-e7646693cc58"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_quin_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_quin_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHTBSptspp" metaid="a7cd7347-243a-4ea4-86c6-cc55b9b7ce10" name="R_CHTBSptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a7cd7347-243a-4ea4-86c6-cc55b9b7ce10"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_chtbs6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPPGO" metaid="_3a1ca359-53dd-4137-a384-4c4aed4c2efb" name="protoporphyrinogen_oxidase__aerobic_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.3.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3a1ca359-53dd-4137-a384-4c4aed4c2efb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.3.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1.5"/> + <speciesReference constant="true" species="M_pppg9_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppp9_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSP_L" metaid="_486e5a3f-1611-4213-a1af-da0364cd412c" name="phosphoserine_phosphatase__L_serine_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 3.1.3.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_486e5a3f-1611-4213-a1af-da0364cd412c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG140abcpp" metaid="d569cf55-f1ce-4fac-a614-263236ad327b" name="phosphatidylglycerol_transport_via_ABC_system__n_C14_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d569cf55-f1ce-4fac-a614-263236ad327b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg140_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BHEXAMD_p" metaid="b1754b01-de38-4b32-909c-2c8a0bf2f851" name="R_BHEXAMD_p" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b1754b01-de38-4b32-909c-2c8a0bf2f851"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acgam_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IG3PS" metaid="_8316c47c-13b2-4967-96d9-149ef52f5e2b" name="Imidazole_glycerol_3_phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020270 AND XFCFBP8418_020290</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8316c47c-13b2-4967-96d9-149ef52f5e2b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020290"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020270"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prlp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_aicar_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_eig3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ZN2t3pp" metaid="_89074f04-5c71-4b22-87a4-e9cc5b218486" name="zinc__Zn_2__transport_out_via_proton_antiport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010570</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_89074f04-5c71-4b22-87a4-e9cc5b218486"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_zn2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_zn2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MCTP1Bpp" metaid="_43d8c899-b964-402b-8cc3-5b322c5cebdd" name="murein_crosslinking_transpeptidase_1B__A2pm__A2pm___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_008630 ) OR ( XFCFBP8418_010420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_43d8c899-b964-402b-8cc3-5b322c5cebdd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010420"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5px3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_alaala_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG181abcpp" metaid="ae101868-39b2-4394-b08d-b200e2aeacda" name="phosphatidylglycerol_transport_via_ABC_system__n_C18_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae101868-39b2-4394-b08d-b200e2aeacda"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg181_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHNPTE" metaid="_9c5a9fe1-95bb-4d1c-96ca-65e1bbf685c0" name="R_DHNPTE" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007450</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 5.1.99.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9c5a9fe1-95bb-4d1c-96ca-65e1bbf685c0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.99.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007450"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhnpt_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhmpt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HYXNtpp" metaid="_4a5f98fb-3bd4-4023-8a75-76dcf7743a8e" name="R_HYXNtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a5f98fb-3bd4-4023-8a75-76dcf7743a8e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hxan_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hxan_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_E4P" metaid="_16143a2a-81df-4625-8e0d-024f7c1d9265" name="R_DM_E4P" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_16143a2a-81df-4625-8e0d-024f7c1d9265"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_e4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ILEtex" metaid="_7fb97607-e83e-4f04-a22b-61d665599138" name="L_isoleucine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7fb97607-e83e-4f04-a22b-61d665599138"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ile_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ile_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYTK1" metaid="b35cfab3-f230-41ae-ba8f-262dcad25287" name="cytidylate_kinase__CMP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004870</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b35cfab3-f230-41ae-ba8f-262dcad25287"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOX2abcpp" metaid="_62738479-cf85-4018-aec9-41eed2607914" name="R_METSOX2abcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_62738479-cf85-4018-aec9-41eed2607914"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_metsox_R_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_metsox_R_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TRPS2" metaid="d4ee51b8-8b6e-4e04-a97f-5f9d65da4c9a" name="R_TRPS2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003820 AND XFCFBP8418_003830</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d4ee51b8-8b6e-4e04-a97f-5f9d65da4c9a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003830"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003820"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_indole_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trp_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DCTPD" metaid="_27d1f9b3-342a-4707-8c9e-b20105bc33ac" name="dCTP_deaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011560</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.5.4.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_27d1f9b3-342a-4707-8c9e-b20105bc33ac"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011560"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dutp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL140t2pp" metaid="d0a9a803-5d82-4d2a-8f86-12aad13447e7" name="fatty_acid_CoA_ligase__tetradecanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d0a9a803-5d82-4d2a-8f86-12aad13447e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttdca_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA181abcpp" metaid="_2882c2e6-f3ce-42a7-9e5b-a3a5b2a932ba" name="phosphatidate_transport_via_ABC_system__n_C18_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2882c2e6-f3ce-42a7-9e5b-a3a5b2a932ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa181_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYKr" metaid="_01d621a5-aaa8-4c78-95a3-bd1c60708a0a" name="glycerol_kinase__reversible_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020720</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01d621a5-aaa8-4c78-95a3-bd1c60708a0a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP120" metaid="_5f9dd26b-c6e9-445b-8eb1-8aec7dd5ab14" name="phosphatidylglycerol_phosphate_phosphatase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f9dd26b-c6e9-445b-8eb1-8aec7dd5ab14"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg120_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUt4pp" metaid="_719fa133-2460-4968-a297-4a346376a133" name="R_GLUt4pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000650</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_719fa133-2460-4968-a297-4a346376a133"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_na1_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GUAtpp" metaid="b9b2cd98-3901-4d60-8afc-ebd4c46d93cd" name="R_GUAtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b9b2cd98-3901-4d60-8afc-ebd4c46d93cd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gua_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gua_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NODOy" metaid="bea88a6d-157a-4674-a63a-db6fec619225" name="nitric_oxide_dioxygenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014590</p> + <p>SUBSYSTEM: Nitrogen_Metabolism</p> + <p>EC_NUMBER: 1.14.12.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bea88a6d-157a-4674-a63a-db6fec619225"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.12.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_no_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_no3_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DTMPK" metaid="_0da9684f-202c-4ba5-b34c-5a0cf61f6192" name="dTMP_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006690</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0da9684f-202c-4ba5-b34c-5a0cf61f6192"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dtmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SUCOAS" metaid="ea388af7-db37-4569-8f66-ef10468d4987" name="succinyl_CoA_synthetase__ADP_forming_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011960 AND XFCFBP8418_011970</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 6.2.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ea388af7-db37-4569-8f66-ef10468d4987"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011970"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011960"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_succoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYTK2" metaid="e66be1e9-3407-4b0b-ac83-de6a60fa30fe" name="cytidylate_kinase__dCMP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004870</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e66be1e9-3407-4b0b-ac83-de6a60fa30fe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dcmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dcdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PNTK" metaid="da5808be-1ffe-4b03-837f-0c48cf839c38" name="pantothenate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018190</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.33</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#da5808be-1ffe-4b03-837f-0c48cf839c38"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.33"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018190"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pnto_R_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ppan_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PAPPT3" metaid="c1fdd5ff-6f8e-4c9e-a65a-87170bae8b65" name="phospho_N_acetylmuramoyl_pentapeptide_transferase__meso_2_6_diaminopimelate_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011280</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.8.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c1fdd5ff-6f8e-4c9e-a65a-87170bae8b65"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011280"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ugmda_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uagmda_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HEPT1" metaid="_121569c1-aca4-4a43-a54e-7ab8a6ad28d1" name="R_HEPT1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019540</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_121569c1-aca4-4a43-a54e-7ab8a6ad28d1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_adphep_LD_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lipidA_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hlipidA_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR161tipp" metaid="abe99089-4242-4fb7-92aa-8e1384b39616" name="R_12DGR161tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#abe99089-4242-4fb7-92aa-8e1384b39616"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr161_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr161_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NNAMr" metaid="_45edd948-9a91-4a3d-ae9c-7d5a9ef1047b" name="nicotinamidase__reversible" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020780</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.5.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_45edd948-9a91-4a3d-ae9c-7d5a9ef1047b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020780"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ncam_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PD5" metaid="e0007e94-29e4-4615-90ae-66b2a8ea76f4" name="glycerol_3_phosphate_dehydrogenase__ubiquinone_8_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020700</p> + <p>SUBSYSTEM: Glycerol_Degradation</p> + <p>EC_NUMBER: 1.1.5.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e0007e94-29e4-4615-90ae-66b2a8ea76f4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.5.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020700"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTPCI" metaid="_8228c5ad-649a-49e1-be1f-4c1f6da9d41b" name="GTP_cyclohydrolase_I" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001100</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.5.4.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8228c5ad-649a-49e1-be1f-4c1f6da9d41b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahdt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HEPT3" metaid="_61f4e47d-1ec6-4b63-8e55-8290a85c1049" name="R_HEPT3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019540</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_61f4e47d-1ec6-4b63-8e55-8290a85c1049"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_adphep_LD_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phhlipidA_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hphhlipidA_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PD2" metaid="f56c2f7a-1537-4b9c-bbf8-8645b86821d8" name="glycerol_3_phosphate_dehydrogenase__NADP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018110</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.1.1.94</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f56c2f7a-1537-4b9c-bbf8-8645b86821d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.94"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018110"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NACtex" metaid="_5f683c5e-d94b-4fef-839b-3363659b8be3" name="Nicotinic_acid_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f683c5e-d94b-4fef-839b-3363659b8be3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nac_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nac_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_P5CG" metaid="_01ee6104-d3d1-4fbc-ba9e-8651bff7eb2f" name="R_P5CG" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01ee6104-d3d1-4fbc-ba9e-8651bff7eb2f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu5sa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1pyr5c_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CDGS" metaid="_297a559f-86bd-4d65-9a6d-81df9ee5d9ea" name="7_deaza_7_carboxyguanine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_016450</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.3.99.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_297a559f-86bd-4d65-9a6d-81df9ee5d9ea"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.99.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016450"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cph4_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cdg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_P5CD" metaid="bf8bce5c-5964-426a-8ddd-934248037087" name="1_pyrroline_5_carboxylate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.5.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bf8bce5c-5964-426a-8ddd-934248037087"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1pyr5c_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CDGR" metaid="b12453cd-1703-4b8e-8a28-dd0d81dc44ad" name="7_cyano_7_deazaguanine_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021550</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.7.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b12453cd-1703-4b8e-8a28-dd0d81dc44ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.7.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_preq0_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_preq1_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DGK1" metaid="_9f81734d-b4bd-41d4-8ddf-79e9695a25a9" name="deoxyguanylate_kinase__dGMP_ATP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002650</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9f81734d-b4bd-41d4-8ddf-79e9695a25a9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dgmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dgdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT120" metaid="_8fbb9223-3e34-4dca-b9f7-5d7ab75b20e5" name="R_G3PAT120" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8fbb9223-3e34-4dca-b9f7-5d7ab75b20e5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ddcaACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1ddecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PHETRS" metaid="d7ced00b-f100-410f-aaeb-4d131894d762" name="Phenylalanyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011750 AND XFCFBP8418_011760</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d7ced00b-f100-410f-aaeb-4d131894d762"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011750"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011760"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phe_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaphe_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phetrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGLYCP" metaid="b7c0d0ef-b131-43f4-8db4-e4314519c5a0" name="Phosphoglycolate_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005170</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.1.3.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b7c0d0ef-b131-43f4-8db4-e4314519c5a0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2pglyc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyclt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGtex" metaid="c0a2be14-66bf-4a69-91bb-52745a063137" name="L_arginine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c0a2be14-66bf-4a69-91bb-52745a063137"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_arg_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_arg_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAMAS" metaid="_6ebf5651-80a6-4232-ac63-3082145b32ca" name="UDP_N_acetylmuramoyl_L_alanine_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011250</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6ebf5651-80a6-4232-ac63-3082145b32ca"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uamr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uama_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADNUC" metaid="_36c795ab-3c17-4599-a6b7-1b9a0fd6f7ec" name="adenosine_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.2.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_36c795ab-3c17-4599-a6b7-1b9a0fd6f7ec"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ade_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rib_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADNt2pp" metaid="c3206781-27f3-4c37-9dc2-c78669cf6757" name="R_ADNt2pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c3206781-27f3-4c37-9dc2-c78669cf6757"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_adn_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NOtpp" metaid="_78e5aea7-2ac6-4a3c-830f-daf94491487e" name="NO_transport__diffusion_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_78e5aea7-2ac6-4a3c-830f-daf94491487e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_no_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_no_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XYLtex" metaid="fa6915be-2f49-4f71-8fcd-6aebad75ef47" name="R_XYLtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fa6915be-2f49-4f71-8fcd-6aebad75ef47"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_xyl_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xyl_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_P5CR" metaid="_158dba30-14f5-401a-b1d8-12dcb1535288" name="pyrroline_5_carboxylate_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013370</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.5.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_158dba30-14f5-401a-b1d8-12dcb1535288"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1pyr5c_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL120t2pp" metaid="_94eba020-6f77-43c1-9fe5-bb1bd7e6aad6" name="fatty_acid_CoA_ligase__dodecanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94eba020-6f77-43c1-9fe5-bb1bd7e6aad6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ddca_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ddcacoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LYSTRS" metaid="_018c56f1-8d37-413b-bb73-e5f0af6dc277" name="Lysyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023900</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_018c56f1-8d37-413b-bb73-e5f0af6dc277"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_lys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnalys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lystrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLTGY4pp" metaid="b2dfa850-588a-40c9-a419-56474c2e0f12" name="murein_lytic_transglycosylase__murein4px4p4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_003940 ) OR ( XFCFBP8418_019770 )</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b2dfa850-588a-40c9-a419-56474c2e0f12"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019770"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4px4p4p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDPGLCUR4EP" metaid="_272c6c48-7392-44f5-8b9d-7f29e040131e" name="R_UDPGLCUR4EP" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020820</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.1.3.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_272c6c48-7392-44f5-8b9d-7f29e040131e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udpglcur_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udpgalur_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PTPAT" metaid="f30e63e6-c461-4c82-be34-8bca956defa3" name="pantetheine_phosphate_adenylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025440</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f30e63e6-c461-4c82-be34-8bca956defa3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pan4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dpcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GRXR" metaid="a46ca013-5f71-401c-8638-1c1d74832e05" name="glutaredoxin_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012410</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.8.4.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a46ca013-5f71-401c-8638-1c1d74832e05"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012410"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUDxi" metaid="bc91dd32-ffce-4384-a9af-332161bfeedb" name="R_GLUDxi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001660</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 1.4.1.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bc91dd32-ffce-4384-a9af-332161bfeedb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.1.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001660"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OCBT" metaid="_5964bf74-d6e5-4ce0-93d3-c13c6acea5bc" name="ornithine_carbamoyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025290</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.1.3.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5964bf74-d6e5-4ce0-93d3-c13c6acea5bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.3.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025290"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cbp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_citr_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MEPCT" metaid="_17165073-998e-4383-8135-c93aeb2917b9" name="2_C_methyl_D_erythritol_4_phosphate_cytidylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022200</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_17165073-998e-4383-8135-c93aeb2917b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2me4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4c2me_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UM4PL" metaid="_53df3af8-acf6-4da2-bf15-451e744c9a05" name="UDP_N_acetylmuramate_L_alanyl_gamma_D_glutamyl_meso_diaminopimelate_D_alanine_ligase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026060</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 6.3.2.45</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_53df3af8-acf6-4da2-bf15-451e744c9a05"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.45"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026060"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uamr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdapDala_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_um4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP141" metaid="_73fd0d3c-0584-4c1b-948f-a56883aee2d2" name="phosphatidylglycerol_phosphate_phosphatase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_73fd0d3c-0584-4c1b-948f-a56883aee2d2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_o2_e" metaid="_646a44a4-5b92-488c-9b8e-b9fe9e3dfa92" name="R_EX_o2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_646a44a4-5b92-488c-9b8e-b9fe9e3dfa92"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_o2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADMDCr" metaid="_4822dbc6-d580-47d8-9c1c-9835a304b3e9" name="Adenosylmethionine_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002270</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 4.1.1.50</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4822dbc6-d580-47d8-9c1c-9835a304b3e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.50"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002270"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ametam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP140" metaid="e4b730ae-8294-4c36-b8a6-d0a83b9a9a82" name="phosphatidylglycerol_phosphate_phosphatase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e4b730ae-8294-4c36-b8a6-d0a83b9a9a82"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACCOACr" metaid="_9a723345-b105-440f-adb5-ccdf64f4e741" name="R_ACCOACr" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003020 AND XFCFBP8418_014550 AND XFCFBP8418_014560 AND XFCFBP8418_026800</p> + <p>SUBSYSTEM: Membrane_Lipid_Metabolism</p> + <p>EC_NUMBER: 6.4.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a723345-b105-440f-adb5-ccdf64f4e741"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.4.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026800"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014560"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003020"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014550"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hco3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_malcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ULA4NFT" metaid="_6b3c7323-6ecc-41de-ac76-774c1351a483" name="R_ULA4NFT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006440</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6b3c7323-6ecc-41de-ac76-774c1351a483"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpLa4n_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpLa4fn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_URAtex" metaid="f361a2e8-85b7-41d8-9aeb-6581c6c97fdd" name="R_URAtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f361a2e8-85b7-41d8-9aeb-6581c6c97fdd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ura_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ura_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDEP2pp" metaid="_53a270fc-b2b1-44b6-850e-cd29a6c12160" name="murein_D_D_endopeptidase__murein3px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_53a270fc-b2b1-44b6-850e-cd29a6c12160"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein3px4p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4p3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRAIS" metaid="_8aceeb76-a43c-4b0b-80c2-3932021ab547" name="phosphoribosylaminoimidazole_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006650</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8aceeb76-a43c-4b0b-80c2-3932021ab547"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fpram_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_air_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_cobalt2_e" metaid="_089057f2-9126-4ed3-9ed5-549b47a61c69" name="R_EX_cobalt2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_089057f2-9126-4ed3-9ed5-549b47a61c69"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_cobalt2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SULabcpp" metaid="eb51e90d-10c2-448b-96d2-005c175b90c1" name="sulfate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004070 AND XFCFBP8418_004080 AND XFCFBP8418_004090 AND XFCFBP8418_004100</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eb51e90d-10c2-448b-96d2-005c175b90c1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004100"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004080"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so4_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP160abcpp" metaid="_2bcff870-8734-42d6-a979-38b35526bbce" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C16_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2bcff870-8734-42d6-a979-38b35526bbce"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp160_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACALDtpp" metaid="_4c8dad63-4c56-4843-8e1b-dcd6a2151f97" name="R_ACALDtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4c8dad63-4c56-4843-8e1b-dcd6a2151f97"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acald_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acald_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSDtex" metaid="_17999d1d-0dac-4cb1-a5b1-b1cb4734d30e" name="R_CYSDtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_17999d1d-0dac-4cb1-a5b1-b1cb4734d30e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cys_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DMQMT" metaid="f192174a-4e57-4847-bd91-879239e05dbe" name="3_Dimethylubiquinonol_3_methyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005180</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.64</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f192174a-4e57-4847-bd91-879239e05dbe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.64"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2omhmbl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SPMDabcpp" metaid="c5945588-1dab-4e2e-ac23-11a842cff4b9" name="spermidine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5945588-1dab-4e2e-ac23-11a842cff4b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_spmd_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_spmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPO5" metaid="c9b32a8b-ef71-4fc9-84f2-8f381ce673cc" name="L_aspartate_oxidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000550</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c9b32a8b-ef71-4fc9-84f2-8f381ce673cc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iasp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAGCVT" metaid="d78d7c18-3e2f-4bb8-ae04-6dcad5b190d1" name="UDP_N_acetylglucosamine_1_carboxyvinyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003450</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d78d7c18-3e2f-4bb8-ae04-6dcad5b190d1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003450"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uacgam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uaccg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPO3" metaid="df514e5b-3ab3-485e-99b3-e3f85b6fb9d6" name="R_ASPO3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000550</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#df514e5b-3ab3-485e-99b3-e3f85b6fb9d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iasp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_h2o_e" metaid="_61cec249-2342-4783-8c02-2d66ef9bd2b7" name="R_EX_h2o_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_61cec249-2342-4783-8c02-2d66ef9bd2b7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MTHFR2" metaid="_152f1441-c730-4edb-8fe8-db9ebe5ffd36" name="5_10_methylenetetrahydrofolate_reductase__NADH_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023810</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: 1.5.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_152f1441-c730-4edb-8fe8-db9ebe5ffd36"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5mthf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Actex" metaid="_79c4f963-40f3-4233-8ecd-eaab21f9a788" name="R_Actex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79c4f963-40f3-4233-8ecd-eaab21f9a788"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_na1_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G1PACT" metaid="_253f3d72-ff88-4265-a00e-0c4e07886924" name="glucosamine_1_phosphate_N_acetyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023670</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.157</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_253f3d72-ff88-4265-a00e-0c4e07886924"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.157"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023670"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gam1p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam1p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2Stpp" metaid="_97e52e9f-73df-4d9e-92d4-050a7fbb8b07" name="R_H2Stpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97e52e9f-73df-4d9e-92d4-050a7fbb8b07"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2s_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2s_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS140pp" metaid="_84c0c025-1c66-4a5a-9f81-a073f398525c" name="cardiolipin_synthase__periplasmic__n_C14_0_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_84c0c025-1c66-4a5a-9f81-a073f398525c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg140_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_clpn140_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UHGADAXF" metaid="_39eef7af-9647-4237-b574-67b855d7791e" name="R_UHGADAXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011190</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.5.1.108</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_39eef7af-9647-4237-b574-67b855d7791e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.108"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011190"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_u3aga_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_u3hga_XF_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPO6" metaid="ecfae277-ee16-4d2b-8dda-a9810b0053c2" name="L_aspartate_oxidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000550</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ecfae277-ee16-4d2b-8dda-a9810b0053c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iasp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PANTS" metaid="_16d88e10-4b9d-4556-a796-6b1258ad22fa" name="pantothenate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026550</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_16d88e10-4b9d-4556-a796-6b1258ad22fa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pant_R_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_B_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pnto_R_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_co2_e" metaid="_2711df0f-e364-4cea-8eee-b6f411cdfa9e" name="R_EX_co2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2711df0f-e364-4cea-8eee-b6f411cdfa9e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_co2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSP" metaid="_4641d575-ba0f-40e8-a26d-932fb2108f61" name="R_PSP" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 3.1.3.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4641d575-ba0f-40e8-a26d-932fb2108f61"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD180" metaid="b94c0c09-7ccb-4593-b50a-9da601600d3c" name="Phosphatidylserine_decarboxylase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b94c0c09-7ccb-4593-b50a-9da601600d3c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe180_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM4PApp" metaid="_045cf426-4bf4-480a-b9dc-8320ce07417a" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_amidase__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011590</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 3.5.1.29</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_045cf426-4bf4-480a-b9dc-8320ce07417a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.29"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdapDala_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSD181" metaid="a5849849-8097-47e6-9bf0-a05c53ddde4b" name="Phosphatidylserine_decarboxylase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003930</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 4.1.1.65</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a5849849-8097-47e6-9bf0-a05c53ddde4b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.65"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ps181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NODOx" metaid="c3fb34ba-15f5-4a90-a6b6-2d5547d91e2b" name="nitric_oxide_dioxygenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014590</p> + <p>SUBSYSTEM: Nitrogen_Metabolism</p> + <p>EC_NUMBER: 1.14.12.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c3fb34ba-15f5-4a90-a6b6-2d5547d91e2b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.12.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_no_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_no3_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2tpp" metaid="fed4783d-7b15-4b74-88bc-2fbfb4de6b6f" name="R_H2tpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fed4783d-7b15-4b74-88bc-2fbfb4de6b6f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_nh4_e" metaid="_14ff9c79-46cc-4a9b-8e19-bec5265cf89e" name="R_EX_nh4_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_14ff9c79-46cc-4a9b-8e19-bec5265cf89e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR160tipp" metaid="_9ddb6a17-a564-4404-aa8d-38886cdd19b9" name="R_12DGR160tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ddb6a17-a564-4404-aa8d-38886cdd19b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr160_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr160_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OMBZLM" metaid="_01570b3c-6b93-4c60-9833-0752ff28d461" name="2_Octaprenyl_6_methoxy_benzoquinol_methylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002810</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.201</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01570b3c-6b93-4c60-9833-0752ff28d461"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.201"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2ombzl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2ommbl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TSULabcpp" metaid="_8460b634-1a44-4244-a0ef-84ccf29747a9" name="thiosulfate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004070 AND XFCFBP8418_004080 AND XFCFBP8418_004090 AND XFCFBP8418_004100</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8460b634-1a44-4244-a0ef-84ccf29747a9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004100"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004080"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tsul_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tsul_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRTRS" metaid="b8eab933-0fa6-4c20-bedd-edae289ea018" name="Threonyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011800</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b8eab933-0fa6-4c20-bedd-edae289ea018"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnathr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thr_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thrtrna_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRAGSr" metaid="_013f4f8f-0241-4957-bada-351b1d2228a8" name="phosphoribosylglycinamide_synthase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001040</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_013f4f8f-0241-4957-bada-351b1d2228a8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001040"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pram_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gar_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP160" metaid="_2eb409c6-b02a-4490-962f-92cb2676f703" name="phosphatidylglycerol_phosphate_phosphatase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2eb409c6-b02a-4490-962f-92cb2676f703"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg160_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYStex" metaid="ab144e88-6902-4e91-ae5a-c420ed7d4cc7" name="L_cysteine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ab144e88-6902-4e91-ae5a-c420ed7d4cc7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cys_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HCO3E" metaid="c28c9d1c-57dd-419d-925b-53bc5d6054f3" name="HCO3_equilibration_reaction" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010460</p> + <p>SUBSYSTEM: Cyanate_degradation</p> + <p>EC_NUMBER: 4.2.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c28c9d1c-57dd-419d-925b-53bc5d6054f3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010460"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hco3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP161" metaid="_69083ce4-81a0-4c4a-beaa-6b65e08b2e1b" name="phosphatidylglycerol_phosphate_phosphatase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_69083ce4-81a0-4c4a-beaa-6b65e08b2e1b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TMPKr" metaid="_0198f89e-6891-4d38-bcb7-5edf188f5c07" name="thiamine_phosphate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009740</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.4.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0198f89e-6891-4d38-bcb7-5edf188f5c07"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009740"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thmmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thmpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_FRMD" metaid="ce369cc1-6ad5-4d1b-bf90-592514d09e8b" name="R_DM_FRMD" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ce369cc1-6ad5-4d1b-bf90-592514d09e8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_frmd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS9" metaid="_5bc43a5a-6127-4454-ba97-cb53be9790ed" name="R_AACPS9" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025958</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5bc43a5a-6127-4454-ba97-cb53be9790ed"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025958"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_octa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OPHBDC" metaid="_4df281e2-fe01-4f86-b3c4-59a537c52c37" name="Octaprenyl_hydroxybenzoate_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4df281e2-fe01-4f86-b3c4-59a537c52c37"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ophb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2oph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL141t2pp" metaid="_0b52d4fd-a030-47fb-99bf-0a40e19a3cb4" name="fatty_acid_CoA_ligase__tetradecenoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b52d4fd-a030-47fb-99bf-0a40e19a3cb4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttdcea_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdecoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADNtex" metaid="_5401ac99-0289-4bde-806c-67175d1ede26" name="Adenosine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5401ac99-0289-4bde-806c-67175d1ede26"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_adn_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adn_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACt2rex" metaid="c7e5b008-44fc-4774-91ff-3ac43427dd93" name="R_ACt2rex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c7e5b008-44fc-4774-91ff-3ac43427dd93"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ac_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDPG4E" metaid="_4d72f9cb-f661-4f28-9738-3104f805018d" name="UDPglucose_4_epimerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 5.1.3.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4d72f9cb-f661-4f28-9738-3104f805018d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udpgal_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP11" metaid="_39c287d2-22d6-4e29-ba3e-c41135c6196b" name="Nucleoside_triphosphate_pyrophosphorylase__xtp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002620</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_39c287d2-22d6-4e29-ba3e-c41135c6196b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP10" metaid="ac88c72c-c847-4b90-a7cf-67d2b7d7baba" name="Nucleoside_triphosphate_pyrophosphorylase__ditp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002620</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac88c72c-c847-4b90-a7cf-67d2b7d7baba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ditp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dimp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AKP1" metaid="_5f39b478-414d-4cff-80b0-3471249098b5" name="alkaline_phosphatase__Dihydroneopterin_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006010</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f39b478-414d-4cff-80b0-3471249098b5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006010"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ahdt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="3"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_dhnpt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDCP3App" metaid="_46a42bc0-a5a3-4663-b4f2-098b6013a76d" name="murein_L_D_carboxypeptidase__murein5px3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_46a42bc0-a5a3-4663-b4f2-098b6013a76d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5px3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein3px3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_alaala_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_fru_e" metaid="bd070f57-ef0c-4e22-8ebb-4b130fee5e15" name="R_EX_fru_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bd070f57-ef0c-4e22-8ebb-4b130fee5e15"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_fru_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G5SD" metaid="_5e5a6203-6e16-45a3-ac35-68474577faeb" name="glutamate_5_semialdehyde_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025220</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.2.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5e5a6203-6e16-45a3-ac35-68474577faeb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025220"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu5sa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG120abcpp" metaid="_1975a1ad-dcdc-4c11-8cc8-585ca1e0189d" name="phosphatidylglycerol_transport_via_ABC_system__n_C12_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1975a1ad-dcdc-4c11-8cc8-585ca1e0189d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg120_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALATRS" metaid="_10bf1fc9-8ae9-4c5e-b9a5-1272e728f66b" name="Alanyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015200</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_10bf1fc9-8ae9-4c5e-b9a5-1272e728f66b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaala_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_alatrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UGLT" metaid="f5315705-4bdc-4bd0-bde5-4086d5e04555" name="UDPglucose__hexose_1_phosphate_uridylyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.7.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f5315705-4bdc-4bd0-bde5-4086d5e04555"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gal1p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g1p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpgal_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGDI_1" metaid="_9a35f452-ad2d-45eb-968e-861d802e0d77" name="R_AGDI_1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004890</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.5.3.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a35f452-ad2d-45eb-968e-861d802e0d77"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.3.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_agm_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_Ncbmpts_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ICYSDS" metaid="c5d2b5ae-ffc2-4230-b55c-96ce23335f77" name="ISC_Cysteine_desulfuration" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002960</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5d2b5ae-ffc2-4230-b55c-96ce23335f77"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iscs_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iscssh_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS160pp" metaid="_5537e257-21c6-450f-a2aa-66f24e786a4b" name="cardiolipin_synthase__periplasmic__n_C16_0_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5537e257-21c6-450f-a2aa-66f24e786a4b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg160_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_clpn160_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UGMDDS" metaid="_6a1f65bb-3745-42d0-938e-35e94dab6724" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamyl_meso_2_6_diaminopimeloyl_D_alanyl_D_alanine_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011290</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6a1f65bb-3745-42d0-938e-35e94dab6724"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011290"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_alaala_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ugmd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ugmda_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALAt2pp" metaid="_3b2d1e9b-1c85-4c12-82dd-7cff859a2796" name="L_alanine_transport_in_via_proton_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3b2d1e9b-1c85-4c12-82dd-7cff859a2796"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS8" metaid="_083a9bec-2e42-4a56-9543-5e74f0b5fbec" name="R_AACPS8" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025957</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_083a9bec-2e42-4a56-9543-5e74f0b5fbec"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025957"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dca_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ETOHtrpp" metaid="be0ab22f-7c5e-46a5-912b-90282c14ca8d" name="R_ETOHtrpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#be0ab22f-7c5e-46a5-912b-90282c14ca8d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_etoh_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_etoh_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA161" metaid="c5cb8e82-ea82-41ec-97c0-030e7cfc14c8" name="Phosphatidylserine_syntase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5cb8e82-ea82-41ec-97c0-030e7cfc14c8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdhdec9eg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ps161_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS7" metaid="_881173e0-e214-4f00-9868-da894511bbf9" name="R_AACPS7" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025956</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_881173e0-e214-4f00-9868-da894511bbf9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025956"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ddca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ddcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA160" metaid="_3af0fb3a-041f-49ca-a021-1dff6738a72b" name="Phosphatidylserine_syntase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3af0fb3a-041f-49ca-a021-1dff6738a72b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdhdecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ps160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS6" metaid="_72e77e6a-c3b9-43cc-b100-5758dbd25509" name="R_AACPS6" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025955</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_72e77e6a-c3b9-43cc-b100-5758dbd25509"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025955"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocdca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MMSAD3" metaid="c4305d14-50b5-4e44-9117-70f366f9fc84" name="methylmalonate_semialdehyde_dehydrogenase__malonic_semialdehyde_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.2.1.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c4305d14-50b5-4e44-9117-70f366f9fc84"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_msa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS5" metaid="cc8eef06-b2af-4f40-a78c-dd54928aa991" name="R_AACPS5" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025954</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cc8eef06-b2af-4f40-a78c-dd54928aa991"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025954"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocdcea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_octeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS4" metaid="_5058549f-0714-424c-bdba-27365bbd9aef" name="R_AACPS4" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025953</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5058549f-0714-424c-bdba-27365bbd9aef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025953"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdcea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LYSt3r" metaid="_4eee9502-90f0-4fef-b8f3-ceedca7c6099" name="R_LYSt3r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013540</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4eee9502-90f0-4fef-b8f3-ceedca7c6099"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_lys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_lys_L_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS3" metaid="ebe987f4-b5a1-4b5c-b3a0-ee9e21ca82ba" name="R_AACPS3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025952</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ebe987f4-b5a1-4b5c-b3a0-ee9e21ca82ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025952"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_palmACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OCOAT1r" metaid="_42a21866-b7d0-4ff6-8ee2-8d37d998c3ec" name="3_oxoacid_CoA_transferase__Succinyl_CoA__acetoacetate_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.8.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_42a21866-b7d0-4ff6-8ee2-8d37d998c3ec"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_succoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acac_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_aacoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYC3Pabcpp" metaid="_242fc832-4f77-4608-b964-ee1b8debb0a3" name="sn_Glycerol_3_phosphate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_242fc832-4f77-4608-b964-ee1b8debb0a3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS120" metaid="_4fc491f7-a221-48ec-9446-38f1687f0093" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4fc491f7-a221-48ec-9446-38f1687f0093"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcaACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3oddecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS2" metaid="_6000cb6e-ade8-45f3-98e9-39dc1d414e56" name="R_AACPS2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025951</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6000cb6e-ade8-45f3-98e9-39dc1d414e56"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025951"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ttdcea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOX1tex" metaid="_93de9196-0857-4430-a373-86039c814f4d" name="R_METSOX1tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_93de9196-0857-4430-a373-86039c814f4d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_metsox_S_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_metsox_S_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS121" metaid="_7dc727be-3606-40dd-9c9a-7ba4444a936c" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C12_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7dc727be-3606-40dd-9c9a-7ba4444a936c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdec3eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3ocddec5eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AACPS1" metaid="_9d4ae961-5fcc-416e-8f9f-dbc6ca85a10a" name="R_AACPS1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d4ae961-5fcc-416e-8f9f-dbc6ca85a10a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttdca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_myrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FMNRx2" metaid="d4736fee-2215-4fbb-a33e-71063cbc9056" name="FMN_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002700 AND XFCFBP8418_002710</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.5.1.38</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d4736fee-2215-4fbb-a33e-71063cbc9056"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.38"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002710"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002700"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fmnh2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_LesA_e" metaid="_97bd024a-a074-4c59-b585-7cd099d362f0" name="R_DM_LesA_e" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97bd024a-a074-4c59-b585-7cd099d362f0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_LesA_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL80t2pp" metaid="_901fc987-d81e-4e25-a9b6-683c318ff94d" name="fatty_acid_CoA_ligase__octanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_901fc987-d81e-4e25-a9b6-683c318ff94d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_octa_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_occoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP181" metaid="_44c752e9-a069-476f-93a5-d633b4fb84d5" name="phosphatidylglycerol_phosphate_phosphatase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_44c752e9-a069-476f-93a5-d633b4fb84d5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp181_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg181_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP180" metaid="_9bf18a9c-6d98-4bce-852e-d76f7cb4166b" name="phosphatidylglycerol_phosphate_phosphatase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9bf18a9c-6d98-4bce-852e-d76f7cb4166b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp180_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGAMT" metaid="_6703ddcc-d856-4bb4-81b8-3bee381864bc" name="phosphoglucosamine_mutase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003010</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.4.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6703ddcc-d856-4bb4-81b8-3bee381864bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003010"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gam1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gam6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FORtppi" metaid="b520ec68-f923-44e9-8ec6-1d9682bc9a43" name="formate_transport_via_diffusion__cytoplasm_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b520ec68-f923-44e9-8ec6-1d9682bc9a43"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_for_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3PEPTabcpp" metaid="af26fc82-0b1d-48f8-9a47-605ace91c3ef" name="tripeptide__LalaDgluMdap__transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004070 ) OR ( XFCFBP8418_004550 ) OR ( XFCFBP8418_007680 ) OR ( XFCFBP8418_010500 ) OR ( XFCFBP8418_013240 ) OR ( XFCFBP8418_019450 ) OR ( XFCFBP8418_022120 ) OR ( XFCFBP8418_024570 ) OR ( XFCFBP8418_024670 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#af26fc82-0b1d-48f8-9a47-605ace91c3ef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019450"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024570"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013240"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdap_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SDPDS" metaid="_443aa0fb-d4f8-44c9-8b90-4dd6660bb936" name="succinyl_diaminopimelate_desuccinylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015120</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 3.5.1.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_443aa0fb-d4f8-44c9-8b90-4dd6660bb936"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015120"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sl26da_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_26dap_LL_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Kt2tex" metaid="_91524f00-6fa5-476e-a636-6f8fc06a942d" name="R_Kt2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_91524f00-6fa5-476e-a636-6f8fc06a942d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_k_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_k_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EPStexXF" metaid="_3d1726d9-e87d-47e6-a3cc-04bcf384654e" name="R_EPStexXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021490</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d1726d9-e87d-47e6-a3cc-04bcf384654e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021490"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_EPS_XF_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_EPS_XF_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE160abcpp" metaid="_34f9a2fd-7e5b-4a2f-bf94-760e334fbeb7" name="phosphatidylethanolamine_transport_via_ABC_system__n_C16_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34f9a2fd-7e5b-4a2f-bf94-760e334fbeb7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe160_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR140tipp" metaid="a83a9158-b98d-4ead-b7b5-a0fde97b8ed5" name="R_12DGR140tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a83a9158-b98d-4ead-b7b5-a0fde97b8ed5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr140_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr140_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_so3_e" metaid="_3bb6c9dd-2ae2-4a45-ab92-96297b8b53e0" name="R_EX_so3_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3bb6c9dd-2ae2-4a45-ab92-96297b8b53e0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_so3_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THYMtex" metaid="_2e56144f-24f5-4667-80e1-80365102e1f7" name="R_THYMtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2e56144f-24f5-4667-80e1-80365102e1f7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thym_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_thym_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LPSS2XF" metaid="_3df2e4a4-fd35-4c2f-871d-5aa2f6284b02" name="R_LPSS2XF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001200</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3df2e4a4-fd35-4c2f-871d-5aa2f6284b02"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpxyl_c" stoichiometry="320"/> + <speciesReference constant="true" species="M_dtdprmn_c" stoichiometry="2188"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dtdp_c" stoichiometry="2188"/> + <speciesReference constant="true" species="M_OLPS_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="320"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACCOAL2r" metaid="_938a464e-1718-4a3f-b0e1-3d0889fd7471" name="R_ACCOAL2r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020630</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 6.2.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_938a464e-1718-4a3f-b0e1-3d0889fd7471"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP180abcpp" metaid="_2b89ef9a-099e-401d-bdd2-f1b9270863b4" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C18_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2b89ef9a-099e-401d-bdd2-f1b9270863b4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp180_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TREHpp" metaid="b82dba7e-27f5-4078-89c5-c8b9dcd5e769" name="alpha_alpha_trehalase__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.28</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b82dba7e-27f5-4078-89c5-c8b9dcd5e769"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.28"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tre_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TTDCEAtexi" metaid="_60d4b136-801a-4f2e-8c68-7d58c19960df" name="R_TTDCEAtexi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_60d4b136-801a-4f2e-8c68-7d58c19960df"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttdcea_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ttdcea_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KAS14" metaid="_7bdb0e75-55bc-4fe1-bf0d-6888bf0d0261" name="beta_ketoacyl_ACP_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Membrane_Lipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7bdb0e75-55bc-4fe1-bf0d-6888bf0d0261"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_actACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE2tex" metaid="f7661dec-e864-4895-a1c8-389b04f18a43" name="iron__II__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f7661dec-e864-4895-a1c8-389b04f18a43"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fe2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fe2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_AMOB" metaid="dcaacf85-ca34-4e84-9012-59026c2aa5a0" name="Sink_needed_to_allow_S_Adenosyl_4_methylthio_2_oxobutanoate_to_leave_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dcaacf85-ca34-4e84-9012-59026c2aa5a0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amob_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALLTNr" metaid="c5916cf1-d154-4738-be1f-27ed22e93f83" name="R_ALLTNr" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025380</p> + <p>SUBSYSTEM: Nitrogen_Metabolism</p> + <p>EC_NUMBER: 3.5.2.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5916cf1-d154-4738-be1f-27ed22e93f83"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.2.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_alltn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_alltt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GALKr" metaid="_1b061ea9-269a-4250-b937-b58c2e495156" name="galactokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1b061ea9-269a-4250-b937-b58c2e495156"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gal_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gal1p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KAS15" metaid="f7e312d1-3191-40ab-8df4-da52647f585d" name="beta_ketoacyl_ACP_synthase__2_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017940</p> + <p>SUBSYSTEM: Membrane_Lipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.180</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f7e312d1-3191-40ab-8df4-da52647f585d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.180"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017940"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_actACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MPTG" metaid="cdcd4102-ac04-4274-9c28-635253283c7b" name="murein_polymerizing_transglycosylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004700 AND XFCFBP8418_008630 ) OR ( XFCFBP8418_004700 AND XFCFBP8418_010420 ) OR ( XFCFBP8418_004700 AND XFCFBP8418_020460 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cdcd4102-ac04-4274-9c28-635253283c7b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004700"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010420"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uaagmda_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAGPT3" metaid="b0f5ce42-1b54-4bf5-850c-120ea691fa8a" name="UDP_N_acetylglucosamine_N_acetylmuramyl__pentapeptide_pyrophosphoryl_undecaprenol_N_acetylglucosamine_transferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011260</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.4.1.227</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b0f5ce42-1b54-4bf5-850c-120ea691fa8a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.227"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uagmda_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uacgam_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uaagmda_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA181" metaid="ac6bbdd2-a452-49af-a324-bea473b59609" name="Phosphatidylserine_syntase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac6bbdd2-a452-49af-a324-bea473b59609"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdodec11eg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ps181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS100" metaid="_7838ce1b-c744-4ef7-b2cc-c53afa1ac0a2" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C10_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7838ce1b-c744-4ef7-b2cc-c53afa1ac0a2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3odecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA180" metaid="e090a074-5339-4dc6-999e-1b5d6b1f9c99" name="Phosphatidylserine_syntase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e090a074-5339-4dc6-999e-1b5d6b1f9c99"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdodecg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ps180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAGDP" metaid="_7d0efe00-c44c-4c84-b6fb-e21815fc8e35" name="UDP_N_acetylglucosamine_diphosphorylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023670</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7d0efe00-c44c-4c84-b6fb-e21815fc8e35"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023670"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uacgam_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACCITRH" metaid="beab3f41-ac76-4242-925b-87d9c7fed86a" name="R_ACCITRH" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025270</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 3.5.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#beab3f41-ac76-4242-925b-87d9c7fed86a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025270"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_accitr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_citr_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NAt3_1" metaid="c13f60cb-78c9-45d6-8713-98dc58e03a49" name="R_NAt3_1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001440</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c13f60cb-78c9-45d6-8713-98dc58e03a49"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_na1_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_chitin_polymer_e" metaid="_433c8e40-7bec-4183-8a78-017746677832" name="R_EX_chitin_polymer_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_433c8e40-7bec-4183-8a78-017746677832"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_chitin_polymer_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IPPMIb" metaid="f8f8e4fd-f967-4d82-860a-e95897d7c117" name="2_isopropylmalate_hydratase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021510 AND XFCFBP8418_021520</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.33</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f8f8e4fd-f967-4d82-860a-e95897d7c117"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.33"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021520"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021510"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ippm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3c3hmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IPPMIa" metaid="d0487c14-22ef-4ec4-91f1-7a4b60b01854" name="3_isopropylmalate_dehydratase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021510 AND XFCFBP8418_021520</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.33</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d0487c14-22ef-4ec4-91f1-7a4b60b01854"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.33"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021520"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021510"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3c2hmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ippm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADEt2rpp" metaid="_57ae459d-f59e-404a-867e-2fb6c241c5fb" name="adenine_transport_via_proton_symport__reversible___periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_57ae459d-f59e-404a-867e-2fb6c241c5fb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ade_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ade_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UREA" metaid="e53cacbc-1df2-45a8-87e3-888fc0cc1d8b" name="urease" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.5.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e53cacbc-1df2-45a8-87e3-888fc0cc1d8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_urea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG141abcpp" metaid="a6b6b0c3-0333-4a06-9d42-71915151005e" name="phosphatidylglycerol_transport_via_ABC_system__n_C14_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a6b6b0c3-0333-4a06-9d42-71915151005e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg141_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRPPS" metaid="c1d21756-841a-4c8f-a3ec-050b279a553c" name="phosphoribosylpyrophosphate_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012870</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 2.7.6.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c1d21756-841a-4c8f-a3ec-050b279a553c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.6.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT120" metaid="_3bfe3995-07a7-478d-afcb-33082a6a791a" name="1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3bfe3995-07a7-478d-afcb-33082a6a791a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ddcaACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1ddecg3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa120_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN181" metaid="b2ea9316-62d4-4d5f-8377-74f4f759ee1a" name="CDP_diacylglycerol_synthetase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b2ea9316-62d4-4d5f-8377-74f4f759ee1a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pa181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cdpdodec11eg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_X5PL3E" metaid="a132e0d4-615d-4cb2-80d5-b164796db653" name="R_X5PL3E" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a132e0d4-615d-4cb2-80d5-b164796db653"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_xu5p_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ru5p_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HPPK2" metaid="_47036610-be70-43b0-8ff1-24d147c86c79" name="6_hydroxymethyl_dihydropterin_pyrophosphokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026570</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.6.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_47036610-be70-43b0-8ff1-24d147c86c79"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.6.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_6hmhpt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_6hmhptpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE180abcpp" metaid="ac3dee43-de4a-4448-9370-ecc7926b2fa4" name="phosphatidylethanolamine_transport_via_ABC_system__n_C18_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac3dee43-de4a-4448-9370-ecc7926b2fa4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe180_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN180" metaid="fff29606-f162-4780-93f3-475b874c2f59" name="CDP_diacylglycerol_synthetase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fff29606-f162-4780-93f3-475b874c2f59"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdodecg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDCPDPtppi" metaid="_7a4c3dd9-4e12-466f-9bbc-3dbdb36e3b6d" name="R_UDCPDPtppi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7a4c3dd9-4e12-466f-9bbc-3dbdb36e3b6d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udcpdp_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CD2tex" metaid="cee97fe3-a814-4f9d-b69d-6cdb53aabc3f" name="cadmium__Cd_2__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cee97fe3-a814-4f9d-b69d-6cdb53aabc3f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cd2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cd2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_rib_D_e" metaid="_20e83a14-6cb4-4e1b-9c32-bfa6604418b3" name="R_EX_rib_D_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_20e83a14-6cb4-4e1b-9c32-bfa6604418b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_rib_D_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYCt" metaid="_5300ba34-0572-43a1-8e4b-7766ce41b435" name="R_GLYCt" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020710</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5300ba34-0572-43a1-8e4b-7766ce41b435"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_2THZPSN" metaid="_29ed181c-b67e-4396-8010-a03a6ca9a424" name="R_2THZPSN" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002960 AND XFCFBP8418_010710 AND XFCFBP8418_011380 AND XFCFBP8418_025440</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_29ed181c-b67e-4396-8010-a03a6ca9a424"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025440"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011380"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010710"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2c4mthzep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAPabcpp" metaid="_4f146b55-b8fe-46c2-9a7a-bf18896903c7" name="R_DAPabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4f146b55-b8fe-46c2-9a7a-bf18896903c7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_26dap_M_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_26dap_M_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADEtex" metaid="cbfbcfdf-22e9-4308-ac89-9194911f2982" name="adenine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cbfbcfdf-22e9-4308-ac89-9194911f2982"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ade_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ade_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDCP2pp" metaid="_9b337c50-c719-42ec-b785-3c2dfe7f7cef" name="murein_D_D_carboxypeptidase__murein5px4px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_018620 ) OR ( XFCFBP8418_020420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.16.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b337c50-c719-42ec-b785-3c2dfe7f7cef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein5px4px4p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein4px4px4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSDabcpp" metaid="db962fa4-a856-44b9-a7a1-c3b019636173" name="R_CYSDabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#db962fa4-a856-44b9-a7a1-c3b019636173"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UACMAMO" metaid="b8359d44-4150-4ea9-ac92-65b3e076b3f6" name="UDP_N_acetyl_D_mannosamine_oxidoreductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023250</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.336</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b8359d44-4150-4ea9-ac92-65b3e076b3f6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.336"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_uacmam_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_uacmamu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA120" metaid="c1911f53-b995-4962-844e-95575d086deb" name="Phosphatidylserine_syntase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c1911f53-b995-4962-844e-95575d086deb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdddecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ps120_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHRPL" metaid="_144ecfe1-5e21-461a-b6c7-237648271450" name="Chorismate_pyruvate_lyase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011490</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.3.40</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_144ecfe1-5e21-461a-b6c7-237648271450"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.40"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011490"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chor_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4hbz_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PItex" metaid="_021e930c-78bd-4508-9b10-628161093fbc" name="glycero_3_phospho_1_inositol_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_021e930c-78bd-4508-9b10-628161093fbc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3pi_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3pi_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP181abcpp" metaid="_6910f36a-f866-44ec-963f-fb627be23d8e" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C18_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6910f36a-f866-44ec-963f-fb627be23d8e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp181_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_COBALT2tex" metaid="_24ace21b-f744-4cb5-8d4e-f117f90be7c5" name="cobalt__Co_2__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24ace21b-f744-4cb5-8d4e-f117f90be7c5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cobalt2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cobalt2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CITt3tex" metaid="_7f0702f7-9a84-4a84-8655-b46f3695f187" name="R_CITt3tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7f0702f7-9a84-4a84-8655-b46f3695f187"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cit_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cit_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTPCII2" metaid="_0b1ee868-2ca5-41ae-9660-fd42fbfd9a53" name="GTP_cyclohydrolase_II__25drapp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001170</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.5.4.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b1ee868-2ca5-41ae-9660-fd42fbfd9a53"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_25drapp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYCL" metaid="_34a00b12-a3b3-4efe-bfd8-ea0b3648edf7" name="Glycine_Cleavage_System" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003740 AND XFCFBP8418_010560 AND XFCFBP8418_015760 AND XFCFBP8418_015770</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34a00b12-a3b3-4efe-bfd8-ea0b3648edf7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003740"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015770"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010560"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015760"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HBZOPT" metaid="_859b4d9e-d4e9-48fa-8e34-605aeb6bd094" name="Hydroxybenzoate_octaprenyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014680</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.39</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_859b4d9e-d4e9-48fa-8e34-605aeb6bd094"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.39"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_octdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4hbz_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ophb_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDCP2Bpp" metaid="_5bc3d4c2-03ca-4d63-997a-b036b8201da4" name="murein_L_D_carboxypeptidase__murein4p3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5bc3d4c2-03ca-4d63-997a-b036b8201da4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein3p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSabcpp" metaid="bc9f4672-0bd3-4db4-a8de-9293b57677df" name="L_cysteine_uptake_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bc9f4672-0bd3-4db4-a8de-9293b57677df"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NITL4" metaid="_4f226009-7c46-4f5c-bc20-7d6b71729812" name="nitrilase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004900</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 3.5.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4f226009-7c46-4f5c-bc20-7d6b71729812"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pheacnit_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_BIOMASS_c" metaid="_4871584b-a1fb-4f05-bb6a-81011942db8a" name="R_DM_BIOMASS_c" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4871584b-a1fb-4f05-bb6a-81011942db8a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_BIOMASS_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAPDC" metaid="_3ae6ce1a-3c5a-4f21-8cfc-bcd76f8eef8d" name="diaminopimelate_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023860</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 4.1.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3ae6ce1a-3c5a-4f21-8cfc-bcd76f8eef8d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023860"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_26dap_M_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_lys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NITL5" metaid="_1307019b-a1b1-4773-8222-16cff7d40ca3" name="nitrilase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004900</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.5.5.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1307019b-a1b1-4773-8222-16cff7d40ca3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_bzonit_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_bz_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SO3abcpp" metaid="faf82e1a-1d8a-4788-bd9a-b45d27c4d584" name="R_SO3abcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004070 AND XFCFBP8418_004080 AND XFCFBP8418_004090 AND XFCFBP8418_004100</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#faf82e1a-1d8a-4788-bd9a-b45d27c4d584"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004100"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004080"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so3_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACM6PH" metaid="_63d3f650-18a4-4ff6-9e83-d579b44b3efb" name="N_acetylmuramate_6_phosphate_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.2.1.126</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_63d3f650-18a4-4ff6-9e83-d579b44b3efb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.126"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acmum6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acgam6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lac_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DSBCGT" metaid="_96b1c983-3e7a-4693-9742-690df645eb69" name="DsbC_glutathione_thiotransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003390</p> + <p>SUBSYSTEM: Protein_disulfide_bond_transfer</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96b1c983-3e7a-4693-9742-690df645eb69"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dsbcox_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthrd_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dsbcrd_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthox_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NMNN" metaid="_75340bb8-4f57-4630-b302-0e410854ea1a" name="R_NMNN" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.2.2.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_75340bb8-4f57-4630-b302-0e410854ea1a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ncam_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OGMEACPD" metaid="_0882e8db-1b85-40e8-8720-84d0c41ebce8" name="3_Oxo_glutaryl__ACP__methyl_ester_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0882e8db-1b85-40e8-8720-84d0c41ebce8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hgmeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_egmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_k_e" metaid="_1c224853-b9bd-4b91-9c12-031dc274cf2b" name="R_EX_k_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1c224853-b9bd-4b91-9c12-031dc274cf2b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_k_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG161abcpp" metaid="_4eae385e-cccb-4a2c-bee1-6769794a402c" name="phosphatidylglycerol_transport_via_ABC_system__n_C16_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4eae385e-cccb-4a2c-bee1-6769794a402c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pg161_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RBKr" metaid="_28e4dd65-346a-4793-8d21-f58e2830dc0c" name="ribokinase_reversible" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_008660</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28e4dd65-346a-4793-8d21-f58e2830dc0c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008660"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rib_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MICITDr" metaid="_16a96a25-935d-4afd-b4ca-b2b918509ba0" name="2_methylisocitrate_dehydratase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025910</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.2.1.99</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_16a96a25-935d-4afd-b4ca-b2b918509ba0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.99"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2mcacn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_micit_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT140" metaid="_76c327a0-64f3-48af-bac2-21e08135d8f0" name="1_tetradecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76c327a0-64f3-48af-bac2-21e08135d8f0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_myrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1tdecg3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAMAGS" metaid="_0fe35e46-cae4-4900-aab6-9b60b92b21ee" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamate_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023840</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0fe35e46-cae4-4900-aab6-9b60b92b21ee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uama_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uamag_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRS" metaid="_9ecfd703-3f9b-405b-ac8f-39bd0e0b73d5" name="threonine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020360</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 4.2.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ecfd703-3f9b-405b-ac8f-39bd0e0b73d5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phom_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thr_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DKGLUCK" metaid="_606ba1b7-d299-4516-800f-23ce787b4edb" name="2_deoxy_5_keto_D_gluconic_acid_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.92</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_606ba1b7-d299-4516-800f-23ce787b4edb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.92"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dkglc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_6pddgluc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT141" metaid="_4d748a4a-7b65-483b-a02a-dc430687525b" name="1_tetradec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4d748a4a-7b65-483b-a02a-dc430687525b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_1tdec7eg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN160" metaid="_690fdbee-8b0f-4df9-94bf-84e7fa117bcb" name="CDP_diacylglycerol_synthetase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_690fdbee-8b0f-4df9-94bf-84e7fa117bcb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa160_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdhdecg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN161" metaid="a97705a7-3409-4ac6-88c4-d8201067e87f" name="CDP_diacylglycerol_synthetase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a97705a7-3409-4ac6-88c4-d8201067e87f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa161_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdhdec9eg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PMDPHT" metaid="_63c64b55-d57b-433b-b37b-8926231124e5" name="pyrimidine_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005170</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_63c64b55-d57b-433b-b37b-8926231124e5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5aprbu_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4r5au_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S2FE2SS2" metaid="_79f20238-a43c-4471-ba5e-19db00879552" name="R_S2FE2SS2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950 AND XFCFBP8418_002960 AND XFCFBP8418_025330</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79f20238-a43c-4471-ba5e-19db00879552"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufsesh_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="7"/> + <speciesReference constant="true" species="M_sufse_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDCP1App" metaid="cae4d2be-3ee7-4bb6-baa9-097d9e2efd8c" name="murein_L_D_carboxypeptidase__murein5px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cae4d2be-3ee7-4bb6-baa9-097d9e2efd8c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_alaala_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_murein3px4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HCO3tex" metaid="ed627a8a-6b03-4bec-9866-917c9efefb6a" name="R_HCO3tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ed627a8a-6b03-4bec-9866-917c9efefb6a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hco3_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hco3_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_URCN" metaid="e26a7dfb-3e73-45e3-9850-e0feb8da90ae" name="urocanase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.49</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e26a7dfb-3e73-45e3-9850-e0feb8da90ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.49"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_urcan_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4izp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HEMEOS" metaid="_05e2bd9b-e836-41a3-b965-318c66d29860" name="Heme_O_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003980</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.141</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_05e2bd9b-e836-41a3-b965-318c66d29860"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.141"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_frdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pheme_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hemeO_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HCO3abcpp" metaid="fc79df28-db6d-4647-9a25-7e5d039f0e34" name="R_HCO3abcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007690</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fc79df28-db6d-4647-9a25-7e5d039f0e34"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hco3_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hco3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACOTA" metaid="_35d3bd35-ff20-4233-ac07-f7524dd63794" name="acetylornithine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003360</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.6.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_35d3bd35-ff20-4233-ac07-f7524dd63794"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acorn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acg5sa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHPS2" metaid="_0910cfff-a0d6-449d-a8a9-69d6689a0900" name="dihydropteroate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014930</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0910cfff-a0d6-449d-a8a9-69d6689a0900"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4abz_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_6hmhptpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhpt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL100t2pp" metaid="d1eae919-daa3-4d78-a329-cb01833e7d7d" name="fatty_acid_CoA_ligase__decanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d1eae919-daa3-4d78-a329-cb01833e7d7d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dca_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcacoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NMNtex" metaid="d126276d-34ac-45a1-8be7-c3482f615ad7" name="R_NMNtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d126276d-34ac-45a1-8be7-c3482f615ad7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nmn_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nmn_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_O2tpp" metaid="_97b68843-fbfc-462b-9b38-b960c6232da5" name="o2_transport_via_diffusion__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97b68843-fbfc-462b-9b38-b960c6232da5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR141tipp" metaid="ffc643cc-a0d4-448a-a6ec-b441b82305be" name="R_12DGR141tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ffc643cc-a0d4-448a-a6ec-b441b82305be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr141_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr141_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SADT2" metaid="_5aa01bac-402d-4015-8fae-d2de0d40a3af" name="Sulfate_adenyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002680 AND XFCFBP8418_002690</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 2.7.7.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5aa01bac-402d-4015-8fae-d2de0d40a3af"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002690"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so4_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_aps_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASP1DC" metaid="_3dad8860-fadb-4d45-b78f-ea6623501438" name="aspartate_1_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026540</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3dad8860-fadb-4d45-b78f-ea6623501438"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_B_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA141" metaid="_96d1e5e8-7505-4e20-bb88-8de38ff45115" name="Phosphatidylserine_syntase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96d1e5e8-7505-4e20-bb88-8de38ff45115"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdtdec7eg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ps141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OGMEACPS" metaid="_035776d4-ce25-4406-adbc-5d614ecb3297" name="3_Oxo_glutaryl__ACP__methyl_ester_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017940</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_035776d4-ce25-4406-adbc-5d614ecb3297"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017940"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malcoame_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ogmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSSA140" metaid="b6be7b5c-9ee1-4d01-8f46-585cebd1a3b9" name="Phosphatidylserine_syntase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007390</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b6be7b5c-9ee1-4d01-8f46-585cebd1a3b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdtdecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ps140_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLCtex" metaid="_42438596-6d57-4484-8c61-7ae6ea285615" name="glucose_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_42438596-6d57-4484-8c61-7ae6ea285615"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glc_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CMPN" metaid="f1e94955-c06e-4682-afdf-337ba30a04b0" name="R_CMPN" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007150</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.2.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f1e94955-c06e-4682-afdf-337ba30a04b0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007150"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_csn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OGMEACPR" metaid="ef87a881-74aa-4665-8b74-7390b15be581" name="3_Oxo_glutaryl__ACP__methyl_ester_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ef87a881-74aa-4665-8b74-7390b15be581"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ogmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hgmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NACODA" metaid="_3f26c8e9-8f85-4cc5-a178-ac9e0dc1c6f9" name="N_acetylornithine_deacetylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025270</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3f26c8e9-8f85-4cc5-a178-ac9e0dc1c6f9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025270"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acg5sa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu5sa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NNATr" metaid="_2adc3af3-4199-4fbf-be6c-96b4c4c930f7" name="nicotinate_nucleotide_adenylyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019740</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.7.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2adc3af3-4199-4fbf-be6c-96b4c4c930f7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019740"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nicrnt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dnad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LGTHL" metaid="fcef5802-3d5d-46f2-a6ba-453e430b6219" name="lactoylglutathione_lyase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003630</p> + <p>SUBSYSTEM: Methylglyoxal_Metabolism</p> + <p>EC_NUMBER: 4.4.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fcef5802-3d5d-46f2-a6ba-453e430b6219"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.4.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mthgxl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_lgt_S_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_tre_e" metaid="_2b25f65c-97e2-404d-901a-2f351b852d79" name="R_EX_tre_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2b25f65c-97e2-404d-901a-2f351b852d79"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_tre_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP160pp" metaid="a1b419c0-81da-4e40-a057-a1e9407e11f6" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a1b419c0-81da-4e40-a057-a1e9407e11f6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp160_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg160_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYAT" metaid="e9dc1a75-b6d0-406f-afa0-5fbbc5757598" name="glycine_C_acetyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004000</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 2.3.1.29</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e9dc1a75-b6d0-406f-afa0-5fbbc5757598"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.29"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004000"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2aobut_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OPMEACPR" metaid="_38311acc-fe0e-4fe8-b291-e50c8b6cd311" name="3_Oxo_pimeloyl__ACP__methyl_ester_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_38311acc-fe0e-4fe8-b291-e50c8b6cd311"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_opmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hpmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OPMEACPS" metaid="de252ec5-5a95-4339-95de-75bd74c748d6" name="3_Oxo_pimeloyl__ACP__methyl_ester_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#de252ec5-5a95-4339-95de-75bd74c748d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gmeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_opmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NMNt7pp" metaid="d24df04a-1053-45b4-9d5b-1b2bb443830c" name="R_NMNt7pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.2.2.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d24df04a-1053-45b4-9d5b-1b2bb443830c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.2.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nmn_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ncam_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROT_pe_LesA" metaid="_5357bd7d-8ed9-4a47-9785-f9800b06ae3a" name="R_PROT_pe_LesA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002410 AND XFCFBP8418_002430 AND XFCFBP8418_002450 AND XFCFBP8418_002490 AND XFCFBP8418_002510 AND XFCFBP8418_007090 AND XFCFBP8418_007140 AND XFCFBP8418_008580 AND XFCFBP8418_009650 AND XFCFBP8418_014460</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5357bd7d-8ed9-4a47-9785-f9800b06ae3a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002490"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002430"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008580"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002410"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007140"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009650"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002450"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="601"/> + <speciesReference constant="true" species="M_LesA_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="601"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_LesA_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="601"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="601"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THIORDXi" metaid="_0cd67b67-db31-4c16-81ee-fb0e0ac0b203" name="hydrogen_peroxide_reductase__thioredoxin_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_009690 ) OR ( XFCFBP8418_009690 AND XFCFBP8418_013260 ) OR ( XFCFBP8418_016490 ) OR ( XFCFBP8418_027830 )</p> + <p>SUBSYSTEM: Superoxide_radicals_degradation</p> + <p>EC_NUMBER: 1.11.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0cd67b67-db31-4c16-81ee-fb0e0ac0b203"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.11.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009690"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027830"/> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016490"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SLNTtpp" metaid="c6a70f8d-7458-4027-a984-349491373917" name="selenite_transport_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004070 AND XFCFBP8418_004080 AND XFCFBP8418_004090</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c6a70f8d-7458-4027-a984-349491373917"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004080"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_slnt_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_slnt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN141" metaid="d26ad3a6-bebe-42cd-9237-035ba1b3eed7" name="CDP_diacylglycerol_synthetase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d26ad3a6-bebe-42cd-9237-035ba1b3eed7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pa141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdtdec7eg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGTRS" metaid="_498f98ae-e4c7-42d3-8f54-d49e92362ece" name="Arginyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015410</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_498f98ae-e4c7-42d3-8f54-d49e92362ece"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015410"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaarg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_argtrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_gam_e" metaid="_5ff50da0-3067-4ccc-bc06-431e0e095786" name="R_EX_gam_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ff50da0-3067-4ccc-bc06-431e0e095786"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_gam_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN140" metaid="_28c0f073-5fec-4c04-8491-4d0cd1fc0982" name="CDP_diacylglycerol_synthetase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28c0f073-5fec-4c04-8491-4d0cd1fc0982"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pa140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cdpdtdecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHNCOAT" metaid="_172f23b0-3e36-4ec7-a8f7-4877f049e313" name="R_DHNCOAT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000310 ) OR ( XFCFBP8418_016380 ) OR ( XFCFBP8418_027720 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_172f23b0-3e36-4ec7-a8f7-4877f049e313"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000310"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016380"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_14dhncoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhna_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OCDCAtexi" metaid="_83ec1012-b479-41ea-9b1c-741d6ab0c55b" name="R_OCDCAtexi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83ec1012-b479-41ea-9b1c-741d6ab0c55b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocdca_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ocdca_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INOSTt2pp" metaid="_60d617c5-eb84-43d2-a135-e69aea81b345" name="myo_Inositol_transport_in_via_proton_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_60d617c5-eb84-43d2-a135-e69aea81b345"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_inost_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_inost_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INDOLEtex" metaid="_3d815093-2372-46d7-b732-629120c99cb7" name="R_INDOLEtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d815093-2372-46d7-b732-629120c99cb7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_indole_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_indole_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CMPA_1" metaid="_3bf975a4-4ad7-4ad8-9f6b-e7e926c264a4" name="R_CMPA_1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 3.5.1.53</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3bf975a4-4ad7-4ad8-9f6b-e7e926c264a4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.53"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_Ncbmpts_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ptrc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TTDCAtex" metaid="f68853a7-bb81-4117-8b8a-d5b23354fe12" name="Tetradecanoate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f68853a7-bb81-4117-8b8a-d5b23354fe12"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttdca_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ttdca_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BPNT" metaid="_0bd2463b-6ba8-4599-8cc9-37d09a118595" name="3__5__bisphosphate_nucleotidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015810</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 3.1.3.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0bd2463b-6ba8-4599-8cc9-37d09a118595"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CBPS" metaid="d26f35f6-2ec3-4773-9be0-0c2ebea9bb7e" name="carbamoyl_phosphate_synthase__glutamine_hydrolysing_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023960 AND XFCFBP8418_023970</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 6.3.5.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d26f35f6-2ec3-4773-9be0-0c2ebea9bb7e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.5.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023970"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023960"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hco3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_cbp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALCD2y" metaid="b889036a-9533-4a29-bce6-e97aa68065d0" name="alcohol_dehydrogenase__ethanol_nadp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021600</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b889036a-9533-4a29-bce6-e97aa68065d0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021600"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_etoh_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acald_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EPMEACPR" metaid="_0f96bf08-f967-48f3-93bf-7dce412104f3" name="Enoylpimeloyl__ACP__methyl_ester_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0f96bf08-f967-48f3-93bf-7dce412104f3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_epmeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOBDabcpp" metaid="a3c26352-4e70-49d6-bdbe-251095bf2931" name="molybdate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004070 AND XFCFBP8418_004080 AND XFCFBP8418_004090 AND XFCFBP8418_004100</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a3c26352-4e70-49d6-bdbe-251095bf2931"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004100"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004080"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mobd_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mobd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UMPK" metaid="_843f2051-31c6-49f8-9274-c50f7feaa5f5" name="UMP_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004870 ) OR ( XFCFBP8418_024760 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_843f2051-31c6-49f8-9274-c50f7feaa5f5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004870"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024760"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_dextrin_e" metaid="_0d547eb7-32fb-4cfb-a882-4ca7f6e35a8d" name="R_EX_dextrin_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0d547eb7-32fb-4cfb-a882-4ca7f6e35a8d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_dextrin_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAPtex" metaid="_95c3d2bf-26e3-4528-b8d7-220421fe20b3" name="R_DAPtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_95c3d2bf-26e3-4528-b8d7-220421fe20b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_26dap_M_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_26dap_M_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OPMEACPD" metaid="_5bb5cc38-4c7b-4c7b-a903-879afa6edeb4" name="3_Oxo_pimeloyl__ACP__methyl_ester_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5bb5cc38-4c7b-4c7b-a903-879afa6edeb4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hpmeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_epmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSr" metaid="_52a59611-b4b8-491c-8a81-77a799440f58" name="methionine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020760</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 2.1.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_52a59611-b4b8-491c-8a81-77a799440f58"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020760"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hcys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5mthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_F2NAPPUDC" metaid="_32a86585-5561-443d-b82a-af62daf8dd19" name="R_F2NAPPUDC" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004820</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_32a86585-5561-443d-b82a-af62daf8dd19"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpacfuc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f2Nappudp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MPTSS" metaid="f93c4e56-1970-4ac8-9a61-bdc9fb0932a5" name="molybdopterin_synthase_sulfurylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007180</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.80</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f93c4e56-1970-4ac8-9a61-bdc9fb0932a5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.80"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_moadcoo_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_moadamp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGabcpp" metaid="_1afcd294-0571-4975-87e2-dc8f443379e6" name="L_arginine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1afcd294-0571-4975-87e2-dc8f443379e6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_arg_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2tex" metaid="_39f5e57f-2b12-494f-bd68-9ba86f019199" name="R_H2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_39f5e57f-2b12-494f-bd68-9ba86f019199"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_2THZPSN2" metaid="cd8edc97-7777-49ff-8ec2-cdafe1b21523" name="R_2THZPSN2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002960 AND XFCFBP8418_010710 AND XFCFBP8418_011380 AND XFCFBP8418_025440</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd8edc97-7777-49ff-8ec2-cdafe1b21523"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025440"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011380"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010710"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2c4mthzep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTRLASE3" metaid="_134e14c8-23d7-4975-8993-627cad8b0328" name="nitrilase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004900</p> + <p>SUBSYSTEM: Nitrile_degradation</p> + <p>EC_NUMBER: 3.5.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_134e14c8-23d7-4975-8993-627cad8b0328"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_acybut_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUMt2_2tex" metaid="e84f88d3-ed67-4fe6-8c89-1d05d753a009" name="R_FUMt2_2tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e84f88d3-ed67-4fe6-8c89-1d05d753a009"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fum_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTRLASE2" metaid="a994ee3a-5c18-4224-b252-d544d7721451" name="nitrilase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004900</p> + <p>SUBSYSTEM: Nitrile_degradation</p> + <p>EC_NUMBER: 3.5.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a994ee3a-5c18-4224-b252-d544d7721451"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_aprop_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ILETA" metaid="_4faf7029-4b9a-45ef-995a-dd6b6cd7daa0" name="isoleucine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001240</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4faf7029-4b9a-45ef-995a-dd6b6cd7daa0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ile_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3mop_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUN" metaid="_6d5db020-42d2-4c67-b09a-71d599af89fd" name="glutaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026750</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 3.5.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6d5db020-42d2-4c67-b09a-71d599af89fd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUR" metaid="ecfb0ef4-ec37-41aa-9ffd-d6a6e4f2054c" name="glutamate_racemase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ecfb0ef4-ec37-41aa-9ffd-d6a6e4f2054c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE3abcpp" metaid="d36a7413-0b8c-4b38-abc3-820c39ccf4ae" name="R_FE3abcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 3.6.3.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d36a7413-0b8c-4b38-abc3-820c39ccf4ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe3_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DASYN120" metaid="_0ba1e8dc-1e0d-4dc0-ad46-1e4fdd620792" name="CDP_diacylglycerol_synthetase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024840</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.7.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ba1e8dc-1e0d-4dc0-ad46-1e4fdd620792"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cdpdddecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NACtpp" metaid="ae1e97f9-8617-497c-ae71-24585acd3ce5" name="R_NACtpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae1e97f9-8617-497c-ae71-24585acd3ce5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nac_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LIPOCT" metaid="bdab0b04-e8cb-4bab-8f54-163eae6288b3" name="Lipoyl_octanoyl__transferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022350</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bdab0b04-e8cb-4bab-8f54-163eae6288b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_octapb_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SHCHF" metaid="d4619ccf-80f9-4cad-96ea-bba4caee5f43" name="R_SHCHF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010970</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.99.1.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d4619ccf-80f9-4cad-96ea-bba4caee5f43"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.99.1.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010970"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_scl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_sheme_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_fe3_e" metaid="d2a448eb-c902-4e33-ab88-6e80ede7832f" name="R_EX_fe3_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d2a448eb-c902-4e33-ab88-6e80ede7832f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_fe3_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ILEabcpp" metaid="_1db2a1a5-3ad1-49be-b2f5-9426939530b0" name="L_isoleucine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1db2a1a5-3ad1-49be-b2f5-9426939530b0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ile_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ile_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NADDP" metaid="_3755c964-c650-40a9-a331-572a12deb4d8" name="R_NADDP" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012090</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.6.1.22</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3755c964-c650-40a9-a331-572a12deb4d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.22"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012090"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nmn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDCPDPS" metaid="dcba839d-2519-4cb8-9aab-1b45abfea0b7" name="Undecaprenyl_diphosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024830</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dcba839d-2519-4cb8-9aab-1b45abfea0b7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024830"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_frdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ipdp_c" stoichiometry="8"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="8"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NMNATr" metaid="_1536dc85-983a-4dc5-a7b2-1693baf7ee7f" name="nicotinamide_nucleotide_adenylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019740</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1536dc85-983a-4dc5-a7b2-1693baf7ee7f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019740"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYALDtpp" metaid="_3d01642d-709a-4a12-9b8e-5c4c7b9143ec" name="R_GLYALDtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020710</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d01642d-709a-4a12-9b8e-5c4c7b9143ec"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyald_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyald_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CS" metaid="_23d90c22-f4bc-4bde-8c29-ab8d669a9aed" name="citrate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002320</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 2.3.3.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_23d90c22-f4bc-4bde-8c29-ab8d669a9aed"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.3.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002320"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cit_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GDDMR" metaid="c8ea31f2-689b-402d-8528-16afb300f073" name="R_GDDMR" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006450</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.1.1.281</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c8ea31f2-689b-402d-8528-16afb300f073"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.281"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006450"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp6dm_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp4d6dm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ABTA" metaid="_3feec985-0dfd-47db-890f-ffdb7d9c4a21" name="R_ABTA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003360</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.6.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3feec985-0dfd-47db-890f-ffdb7d9c4a21"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4abut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sucsal_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUM" metaid="_01f69675-9e9e-403f-a07a-1fbb9a7f1344" name="fumarase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_002100 ) OR ( XFCFBP8418_016890 )</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 4.2.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01f69675-9e9e-403f-a07a-1fbb9a7f1344"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002100"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016890"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mal_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TYRTRS" metaid="_68f26176-267c-4299-8ae1-e8ed7005c387" name="tyrosyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015580</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_68f26176-267c-4299-8ae1-e8ed7005c387"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015580"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tyr_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnatyr_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tyrtrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACGAMABCt" metaid="db998b9d-c4f8-49ab-bc81-335ce9c0c4e3" name="R_ACGAMABCt" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#db998b9d-c4f8-49ab-bc81-335ce9c0c4e3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acgam6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHPPDA2" metaid="_397adf45-3110-49b9-ae89-2c10c38bdc95" name="R_DHPPDA2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009790</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.5.4.26</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_397adf45-3110-49b9-ae89-2c10c38bdc95"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.26"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_25drapp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5apru_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADNK1" metaid="_70c5194d-2459-4c73-baaa-52095bab44ce" name="R_ADNK1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026070</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.1.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_70c5194d-2459-4c73-baaa-52095bab44ce"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS180pp" metaid="_41e3f736-7f18-4ed2-882d-078fcd073cf4" name="cardiolipin_synthase__periplasmic__n_C18_0_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_41e3f736-7f18-4ed2-882d-078fcd073cf4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg180_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_clpn180_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP161abcpp" metaid="_6b4db725-0f46-45cd-91a7-ff5e26647473" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C16_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6b4db725-0f46-45cd-91a7-ff5e26647473"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp161_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS180" metaid="_8292c076-d98f-4659-abf8-5aea04f19a2e" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8292c076-d98f-4659-abf8-5aea04f19a2e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_palmACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3ooctdACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR4b" metaid="_1fce80bd-1ea0-4dbf-923e-87f0e18742da" name="R_RNDR4b" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013020 AND XFCFBP8418_023110 AND XFCFBP8418_023120</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1fce80bd-1ea0-4dbf-923e-87f0e18742da"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013020"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dudp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS181" metaid="f6607936-32c2-4e46-ad0a-30d824da2f35" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.179</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f6607936-32c2-4e46-ad0a-30d824da2f35"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.179"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ocvac11eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_inost_e" metaid="_0aedf89d-8a96-4cfa-92a3-6eb5f2053277" name="R_EX_inost_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0aedf89d-8a96-4cfa-92a3-6eb5f2053277"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_inost_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MAN6PI" metaid="_7dbe2ce6-db32-4f7e-bc6e-b3f2ddf43e5c" name="mannose_6_phosphate_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026210</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.3.1.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7dbe2ce6-db32-4f7e-bc6e-b3f2ddf43e5c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_man6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHAPT" metaid="_5dde2c9f-2b10-4b58-a131-233066c88570" name="R_DHAPT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.121</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5dde2c9f-2b10-4b58-a131-233066c88570"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.121"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dha_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASADH" metaid="_5b379ec5-d580-42e2-b908-5cb20646ef45" name="R_ASADH" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003880</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 1.2.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5b379ec5-d580-42e2-b908-5cb20646ef45"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003880"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4pasp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_aspsa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MALDt2_2tex" metaid="f545ce1c-e54a-4c5b-8a49-c502345c9345" name="R_MALDt2_2tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f545ce1c-e54a-4c5b-8a49-c502345c9345"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mal_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mal_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MALCOAMT" metaid="_4f14dd11-4111-46fe-b081-74f31fa49336" name="Malonyl_CoA_methyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000200 ) OR ( XFCFBP8418_001720 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.197</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4f14dd11-4111-46fe-b081-74f31fa49336"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.197"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000200"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_malcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malcoame_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PGtex" metaid="_44c99b45-18a0-45ae-8d1d-c1b1c42b96c8" name="glycerophoglycerol_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_44c99b45-18a0-45ae-8d1d-c1b1c42b96c8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3pg_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3pg_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DPR" metaid="_9a68ad4c-d4cd-4ce0-9f53-966e0013be3e" name="2_dehydropantoate_2_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.169</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a68ad4c-d4cd-4ce0-9f53-966e0013be3e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.169"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2dhp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pant_R_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLU5K" metaid="b8b1436a-57d8-458d-b9e0-94f26f27e260" name="glutamate_5_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025230</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.7.2.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b8b1436a-57d8-458d-b9e0-94f26f27e260"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.2.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025230"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AIRC2r" metaid="_6645cf46-919f-486a-9823-6781d9cfbbb6" name="phosphoribosylaminoimidazole_carboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013030</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6645cf46-919f-486a-9823-6781d9cfbbb6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_air_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hco3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5caiz_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ATHRDHr" metaid="_7e3a7053-fb8e-4b36-b54f-dd6fdb04058e" name="R_ATHRDHr" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015390</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.381</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7e3a7053-fb8e-4b36-b54f-dd6fdb04058e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.381"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_athr_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2aobut_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROt2rpp" metaid="_9bd00da5-d6af-4066-9645-33a888f9bbcd" name="L_proline_reversible_transport_via_proton_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9bd00da5-d6af-4066-9645-33a888f9bbcd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pro_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GHMT2r" metaid="da8d0d51-de92-452f-a95b-e3db2099f067" name="glycine_hydroxymethyltransferase__reversible" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 2.1.2.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#da8d0d51-de92-452f-a95b-e3db2099f067"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_QUIN2tpp" metaid="d71079b3-0b61-482c-80db-53375e0430ac" name="R_QUIN2tpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d71079b3-0b61-482c-80db-53375e0430ac"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_quin_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_quin_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SHSL1r" metaid="f530f847-db22-43d3-9d16-6d7eac17354a" name="R_SHSL1r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010590</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 2.5.1.48</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f530f847-db22-43d3-9d16-6d7eac17354a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.48"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_suchms_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cyst_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RBFK" metaid="_0821679d-8246-41fd-bba1-6ce3a40d8b18" name="riboflavin_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004690</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.26</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0821679d-8246-41fd-bba1-6ce3a40d8b18"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.26"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ribflv_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR3b" metaid="_43142d0a-9eef-49e5-b7f0-e37c0a16a8eb" name="R_RNDR3b" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013020 AND XFCFBP8418_023110 AND XFCFBP8418_023120</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_43142d0a-9eef-49e5-b7f0-e37c0a16a8eb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013020"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dcdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TMPPP" metaid="_0ec55137-23f5-4f3f-9112-d6bd2eafdea0" name="thiamine_phosphate_diphosphorylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_008540</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ec55137-23f5-4f3f-9112-d6bd2eafdea0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2mahmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4mpetz_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thmmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DSBAO1" metaid="_5c0b1182-02bb-4720-beb4-03400b842a82" name="DsbA_protein_reoxidation_reaction__aerobic_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_003290 AND XFCFBP8418_008810 ) OR ( XFCFBP8418_003300 AND XFCFBP8418_008810 )</p> + <p>SUBSYSTEM: Protein_disulfide_bond_transfer</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5c0b1182-02bb-4720-beb4-03400b842a82"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008810"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003300"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008810"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003290"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbard_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbaox_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_4abut_e" metaid="_0a49bcd6-eff9-41d0-bd80-27d644965d83" name="R_EX_4abut_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0a49bcd6-eff9-41d0-bd80-27d644965d83"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_4abut_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FCLT" metaid="_8eb1d4bb-b1c1-44fb-81f9-ebed8b74488d" name="Ferrochelatase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006790</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.99.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8eb1d4bb-b1c1-44fb-81f9-ebed8b74488d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.99.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppp9_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pheme_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HSK" metaid="_9940ff69-7b6c-4680-8a6c-988340fcd018" name="homoserine_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020370</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 2.7.1.39</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9940ff69-7b6c-4680-8a6c-988340fcd018"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.39"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hom_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_phom_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRAr" metaid="_76b3b033-d489-453c-bb92-fa7bfd1b43ff" name="Threonine_Aldolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 4.1.2.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76b3b033-d489-453c-bb92-fa7bfd1b43ff"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thr_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acald_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADSL2r" metaid="dacd9565-cac8-43a7-b468-bae13439ab04" name="adenylosuccinate_lyase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002120</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 4.3.2.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dacd9565-cac8-43a7-b468-bae13439ab04"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.2.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002120"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_25aics_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_aicar_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PGabcpp" metaid="_44db3cb0-b678-4dc7-81ca-28d8e338ea64" name="sn_glycerol_3_phosphoglycerol_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_44db3cb0-b678-4dc7-81ca-28d8e338ea64"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pg_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3pg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_O16A4COLIPAabctex" metaid="b12703fa-9481-407c-82ac-92105fd00866" name="R_O16A4COLIPAabctex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003500 AND XFCFBP8418_003510 AND XFCFBP8418_015320 AND XFCFBP8418_015330</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b12703fa-9481-407c-82ac-92105fd00866"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015320"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_OLPS_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_OLPS_XF_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUtex" metaid="cc285548-4649-4d25-9a09-e6c71c2f1135" name="L_glutamate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cc285548-4649-4d25-9a09-e6c71c2f1135"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROT_cp_LesA" metaid="c7216a2f-75d2-418a-8595-9227e9080418" name="R_PROT_cp_LesA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002410 AND XFCFBP8418_002430 AND XFCFBP8418_002450 AND XFCFBP8418_002490 AND XFCFBP8418_002510 AND XFCFBP8418_007090 AND XFCFBP8418_007140 AND XFCFBP8418_008580 AND XFCFBP8418_009650 AND XFCFBP8418_014460</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c7216a2f-75d2-418a-8595-9227e9080418"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002490"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002430"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008580"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002410"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007140"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009650"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002450"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="601"/> + <speciesReference constant="true" species="M_LesA_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="601"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="601"/> + <speciesReference constant="true" species="M_LesA_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="601"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR2b" metaid="_6e54d580-b45a-4013-a358-079027932d74" name="R_RNDR2b" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013020 AND XFCFBP8418_023110 AND XFCFBP8418_023120</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6e54d580-b45a-4013-a358-079027932d74"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013020"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dgdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_pyr_e" metaid="_8633901e-e762-4406-8ebb-b58c3f6c6f92" name="R_EX_pyr_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8633901e-e762-4406-8ebb-b58c3f6c6f92"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS160" metaid="a3fabda9-649f-4736-b7fa-28241c5853c0" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a3fabda9-649f-4736-b7fa-28241c5853c0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_myrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3opalmACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DSERDHr" metaid="_59ad4187-4ef2-4171-90b9-234bbc54fcee" name="R_DSERDHr" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015390</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.276</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_59ad4187-4ef2-4171-90b9-234bbc54fcee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.276"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2amsa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS161" metaid="d9fd717c-9da8-4cd7-b257-1e48b23ee048" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d9fd717c-9da8-4cd7-b257-1e48b23ee048"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3ocpalm9eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRATPP" metaid="_7bab06b3-5f10-46bc-8921-b52ca4efaa68" name="phosphoribosyl_ATP_pyrophosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020260</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 3.6.1.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7bab06b3-5f10-46bc-8921-b52ca4efaa68"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prbatp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prbamp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_URAt2pp" metaid="c689780f-6291-4a49-8606-befea4ef9449" name="R_URAt2pp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c689780f-6291-4a49-8606-befea4ef9449"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ura_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ura_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GP4GH" metaid="_537a438f-16d9-4cc6-9519-85c84364ff69" name="Gp4G_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019500</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_537a438f-16d9-4cc6-9519-85c84364ff69"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019500"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gp4g_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPK2r" metaid="_0bae4037-a747-4a55-97f0-2d9c35812403" name="polyphosphate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012370</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 2.7.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0bae4037-a747-4a55-97f0-2d9c35812403"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAPE" metaid="_29a03fd9-aefc-4f79-b029-e69b46c520e5" name="diaminopimelate_epimerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002870</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 5.1.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_29a03fd9-aefc-4f79-b029-e69b46c520e5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_26dap_LL_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_26dap_M_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OAAtex" metaid="b07ccf1c-e5f0-4e1a-aec2-8e9ad696935f" name="R_OAAtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b07ccf1c-e5f0-4e1a-aec2-8e9ad696935f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_oaa_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_oaa_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ORPT" metaid="f9ef6e07-c2be-48b1-a3a1-3bf83ffd1efd" name="orotate_phosphoribosyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015470</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 2.4.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f9ef6e07-c2be-48b1-a3a1-3bf83ffd1efd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015470"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_orot5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_orot_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROtex" metaid="_9d708f07-47a2-4900-8f78-559008fb3911" name="L_proline_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d708f07-47a2-4900-8f78-559008fb3911"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pro_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pro_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE120abcpp" metaid="_3a7b34bd-9273-4389-9723-727fa652ce82" name="phosphatidylethanolamine_transport_via_ABC_system__n_C12_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3a7b34bd-9273-4389-9723-727fa652ce82"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe120_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP180pp" metaid="c35596c4-e315-4b33-a091-de5a0f92068b" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c35596c4-e315-4b33-a091-de5a0f92068b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp180_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg180_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_mobd_e" metaid="_20930448-937b-4cf1-ab3f-ecc08d62f091" name="R_EX_mobd_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_20930448-937b-4cf1-ab3f-ecc08d62f091"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_mobd_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR1b" metaid="b9cad4e8-4536-4eec-8c2e-6d989419fe0e" name="R_RNDR1b" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013020 AND XFCFBP8418_023110 AND XFCFBP8418_023120</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b9cad4e8-4536-4eec-8c2e-6d989419fe0e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013020"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UPPDC1" metaid="bbf72941-8f9c-476d-88dc-ce5e8f3cc3f2" name="uroporphyrinogen_decarboxylase__uroporphyrinogen_III_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004180</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.37</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bbf72941-8f9c-476d-88dc-ce5e8f3cc3f2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.37"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uppg3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cpppg3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="4"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PYRt2rpp" metaid="_67a005e1-64b1-49b1-a087-618c55348f69" name="pyruvate_reversible_transport_via_proton_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_67a005e1-64b1-49b1-a087-618c55348f69"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_T2DECAI" metaid="_5f6dd7c4-e043-4833-ae2f-ccd001b942a8" name="trans_2_decenoyl_ACP_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006750</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f6dd7c4-e043-4833-ae2f-ccd001b942a8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tdec2eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cdec3eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADSL1r" metaid="c79adf30-efb3-4c5b-ab16-e56fe3a29df1" name="adenylsuccinate_lyase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002120</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 4.3.2.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c79adf30-efb3-4c5b-ab16-e56fe3a29df1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.2.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002120"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dcamp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHNPA2" metaid="_9e213471-7d57-43b4-ad83-a49b7090064d" name="dihydroneopterin_aldolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007450</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.2.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9e213471-7d57-43b4-ad83-a49b7090064d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007450"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhnpt_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_6hmhpt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gcald_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OMMBLHX" metaid="b915eb59-4fc6-4502-ab13-9ac3eb413803" name="2_Octaprenyl_3_methyl_6_methoxy_1_4_benzoquinol_hydroxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010940</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b915eb59-4fc6-4502-ab13-9ac3eb413803"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010940"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ommbl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="0.5"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2omhmbl_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSSADS" metaid="_9d0218c9-f286-40a8-b0ed-f09b4a88786a" name="R_CYSSADS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002960</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 4.1.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d0218c9-f286-40a8-b0ed-f09b4a88786a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3sala_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_so2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MEOHtex" metaid="f8f0a2d0-bbae-4aa8-9861-728f3528ccc0" name="Methanol_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f8f0a2d0-bbae-4aa8-9861-728f3528ccc0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_meoh_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_meoh_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MG2tpp" metaid="_468c5216-dda7-4ea0-a1be-6d9beafa5192" name="magnesium___2__transport_in_via_diffusion" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010210</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_468c5216-dda7-4ea0-a1be-6d9beafa5192"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mg2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mg2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE140abcpp" metaid="_1c8a405f-6f2b-4349-89a5-74b3a30b1631" name="phosphatidylethanolamine_transport_via_ABC_system__n_C14_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1c8a405f-6f2b-4349-89a5-74b3a30b1631"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe140_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HISTRS" metaid="cf58a71b-ee9b-4e1d-b6bf-7b0e5b537f32" name="Histidyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020350</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cf58a71b-ee9b-4e1d-b6bf-7b0e5b537f32"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnahis_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_his_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_histrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGDCpp" metaid="e5dcc1c1-e648-428d-86dd-7d5bb7df0e6e" name="R_ARGDCpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015380</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 4.1.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e5dcc1c1-e648-428d-86dd-7d5bb7df0e6e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_arg_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_agm_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS140" metaid="f9183968-aad1-4479-871e-85f5ddcce669" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f9183968-aad1-4479-871e-85f5ddcce669"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ddcaACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3omrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OPHHX" metaid="_3f44626a-4910-45ac-86fa-da92802e5d01" name="2_Octaprenylphenol_hydroxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017800</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3f44626a-4910-45ac-86fa-da92802e5d01"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2oph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="0.5"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ohph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS141" metaid="_0ec69bdf-88ce-465f-9218-2538ee9ad8d1" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ec69bdf-88ce-465f-9218-2538ee9ad8d1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cddec5eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ocmrs7eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR180x" metaid="_3bfc5d63-2c65-4b18-acba-50fc84cb20b6" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3bfc5d63-2c65-4b18-acba-50fc84cb20b6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_toctd2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KDOCT2" metaid="_3d706d9f-080e-4204-ae23-70f909a44e8b" name="3_deoxy_manno_octulosonate_cytidylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019240</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.38</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d706d9f-080e-4204-ae23-70f909a44e8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.38"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ckdo_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR2" metaid="_79aeb888-3830-43ed-9cc4-cc33e236b38e" name="ribonucleoside_diphosphate_reductase__GDP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_023110 AND XFCFBP8418_023120 ) OR ( XFCFBP8418_013260 AND XFCFBP8418_023110 AND XFCFBP8418_023120 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79aeb888-3830-43ed-9cc4-cc33e236b38e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dgdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR1" metaid="b3219740-d050-4774-a42b-f624af5ded79" name="ribonucleoside_diphosphate_reductase__ADP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_023110 AND XFCFBP8418_023120 ) OR ( XFCFBP8418_013260 AND XFCFBP8418_023110 AND XFCFBP8418_023120 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b3219740-d050-4774-a42b-f624af5ded79"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FMETTRS" metaid="a2feb2dc-03c1-4e58-b8cc-f958156cc5ef" name="Methionyl_tRNA_formyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009950</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 2.1.2.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a2feb2dc-03c1-4e58-b8cc-f958156cc5ef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mettrna_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fmettrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SPODM" metaid="_044de510-3507-4d74-8e62-1e1e87019bd4" name="superoxide_dismutase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012590</p> + <p>SUBSYSTEM: Superoxide_radicals_degradation</p> + <p>EC_NUMBER: 1.15.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_044de510-3507-4d74-8e62-1e1e87019bd4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.15.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2s_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD11" metaid="_6e7c9853-0f50-49ff-8fbb-bb6eb66501fe" name="5__nucleotidase__IMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6e7c9853-0f50-49ff-8fbb-bb6eb66501fe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ins_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD10" metaid="e4bb43b8-b699-46df-9320-8e53cae7b56f" name="5__nucleotidase__XMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e4bb43b8-b699-46df-9320-8e53cae7b56f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xtsn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR4" metaid="_896b0e63-5634-4dcf-9958-674ac77696c7" name="ribonucleoside_diphosphate_reductase__UDP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_023110 AND XFCFBP8418_023120 ) OR ( XFCFBP8418_013260 AND XFCFBP8418_023110 AND XFCFBP8418_023120 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_896b0e63-5634-4dcf-9958-674ac77696c7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dudp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RNDR3" metaid="cd2264e5-2cbb-4db6-ad9d-c07c43bcd14e" name="ribonucleoside_diphosphate_reductase__CDP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_023110 AND XFCFBP8418_023120 ) OR ( XFCFBP8418_013260 AND XFCFBP8418_023110 AND XFCFBP8418_023120 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.17.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd2264e5-2cbb-4db6-ad9d-c07c43bcd14e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023110"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dcdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD12" metaid="_5d330281-1b50-41c2-bc1c-73ce1a42e5e7" name="5__nucleotidase__dIMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5d330281-1b50-41c2-bc1c-73ce1a42e5e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dimp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_din_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAAGDS" metaid="_03a62112-53cb-40a6-a5e6-9c48a58b81f1" name="UDP_N_acetylmuramoyl_L_alanyl_D_glutamyl_meso_2_6_diaminopimelate_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011300</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_03a62112-53cb-40a6-a5e6-9c48a58b81f1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011300"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uamag_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_26dap_M_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ugmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDEP3pp" metaid="_48f0e7d9-7db2-4279-8c7e-bf92bf1db331" name="murein_D_D_endopeptidase__murein5px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_48f0e7d9-7db2-4279-8c7e-bf92bf1db331"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5p4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NH4tex" metaid="_248b94d3-106d-4470-8cca-3f6f228bbc8a" name="ammonia_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_248b94d3-106d-4470-8cca-3f6f228bbc8a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nh4_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD121" metaid="_1d7ccf88-33dd-446c-bcea-f99ba152f541" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C12_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1d7ccf88-33dd-446c-bcea-f99ba152f541"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hcddec5eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_t3c5ddeceACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD120" metaid="_22084632-d9f6-40cb-b58f-2e5f42d8c8ad" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_22084632-d9f6-40cb-b58f-2e5f42d8c8ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hddecACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tddec2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_COBALT2tpp" metaid="_71a1ba76-5e3a-4113-a1dc-f3d98c0bbe94" name="cobalt_transport_in_via_permease__no_H__" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010210</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_71a1ba76-5e3a-4113-a1dc-f3d98c0bbe94"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cobalt2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cobalt2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OROTt2_2pp" metaid="_9b8a138c-ca3d-4dcd-b4a2-4e283339ac74" name="Orotate_transport_via_proton_symport__2_H___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025480</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b8a138c-ca3d-4dcd-b4a2-4e283339ac74"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orot_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orot_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MN2t3pp" metaid="_31e36b04-fa1f-40e4-9738-d89a6765dd6b" name="manganese__Mn_2__transport_out_via_proton_antiport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010570</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_31e36b04-fa1f-40e4-9738-d89a6765dd6b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mn2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mn2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NADK" metaid="cd65e5b8-65f7-46b4-8e78-3659cbd30a6a" name="NAD_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_027970</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.9.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd65e5b8-65f7-46b4-8e78-3659cbd30a6a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.9.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027970"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METDtex" metaid="_4238a353-d6cb-4a6c-a9ac-5f3e78809b5e" name="R_METDtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4238a353-d6cb-4a6c-a9ac-5f3e78809b5e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_met_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_met_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALATA_D2" metaid="_0a5e00e9-af40-4141-80c6-64e6817c3fbf" name="D_alanine_transaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0a5e00e9-af40-4141-80c6-64e6817c3fbf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pydx5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyam5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EPSsynthXF" metaid="_79e373ae-ac1a-4360-8bcb-89a7d0543645" name="R_EPSsynthXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021400 AND XFCFBP8418_021410 AND XFCFBP8418_021440 AND XFCFBP8418_021450 AND XFCFBP8418_021460</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79e373ae-ac1a-4360-8bcb-89a7d0543645"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021410"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021400"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021450"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021440"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udpgalur_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_gdpmann_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_EPS_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ORNTA" metaid="d5102a3c-3a3c-434a-94d0-8b96be75b928" name="ornithine_transaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003360</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 2.6.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d5102a3c-3a3c-434a-94d0-8b96be75b928"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu5sa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PMANM" metaid="e7613bec-6717-43e5-9a04-e731c28b552d" name="phosphomannomutase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026200</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.4.2.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e7613bec-6717-43e5-9a04-e731c28b552d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_man1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_man6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SDPTA" metaid="c1b371a7-cf60-4264-b23e-ed786ad87c66" name="succinyldiaminopimelate_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003360</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c1b371a7-cf60-4264-b23e-ed786ad87c66"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sl26da_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sl2a6o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MANptspp" metaid="f6e61095-8bae-4dd9-977a-512e79a6565e" name="R_MANptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f6e61095-8bae-4dd9-977a-512e79a6565e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_man_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_man6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALAt2tex" metaid="_96deabb3-b15e-44dc-9b44-fe6777fd975d" name="R_ALAt2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96deabb3-b15e-44dc-9b44-fe6777fd975d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR181x" metaid="_8bccbcf3-e7bf-473f-ae20-36fee6e62c8f" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8bccbcf3-e7bf-473f-ae20-36fee6e62c8f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c11vaceACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_octeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSTS" metaid="_61b6ac42-738f-4dbc-a0de-595026000983" name="R_CYSTS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006490</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 4.2.1.22</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_61b6ac42-738f-4dbc-a0de-595026000983"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.22"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006490"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hcys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cyst_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM4PCPpp" metaid="_2b90323d-3699-41a8-8135-de16322f7fe3" name="R_AGM4PCPpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 3.4.17.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2b90323d-3699-41a8-8135-de16322f7fe3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP141abcpp" metaid="e4cac7b1-addf-4094-86dd-5626f799b1e7" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C14_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e4cac7b1-addf-4094-86dd-5626f799b1e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp141_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MCOATA" metaid="_34b4986a-38cf-4f0e-b0ff-ac946164acd4" name="Malonyl_CoA_ACP_transacylase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_005920</p> + <p>SUBSYSTEM: Membrane_Lipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.39</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34b4986a-38cf-4f0e-b0ff-ac946164acd4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.39"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005920"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_malcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRMICI" metaid="_4a139dd6-6b1f-42a3-80fa-c1a652f92f40" name="1__5_phosphoribosyl__5___5_phosphoribosylamino_methylideneamino_imidazole_4_carboxamide_isomerase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020280</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 5.3.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a139dd6-6b1f-42a3-80fa-c1a652f92f40"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020280"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_prfp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_prlp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRFGS" metaid="ae9884a2-12e6-45c1-a0b3-eb9c374952fe" name="phosphoribosylformylglycinamidine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003400</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.5.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae9884a2-12e6-45c1-a0b3-eb9c374952fe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.5.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003400"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fgam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fpram_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UBQBM" metaid="f9dec702-3dc6-451a-aba0-3f7b5574765e" name="ubiquinone_biosynthesis_monooxygenase_Coq7" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002280</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.14.13.-</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f9dec702-3dc6-451a-aba0-3f7b5574765e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.14.13.-"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002280"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2hpmhobq_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2hp6mobq_me_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHQD" metaid="_79202ee9-17eb-4a25-8b3d-0aba67bfb05b" name="3_dehydroquinate_dehydratase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014540</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_79202ee9-17eb-4a25-8b3d-0aba67bfb05b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3dhq_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3dhsk_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDPGDC" metaid="_714296ef-25a8-4a7e-8a7d-9b785ef36d1b" name="R_UDPGDC" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006440</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.305</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_714296ef-25a8-4a7e-8a7d-9b785ef36d1b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.305"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006440"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpglcur_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpLa4o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALAR" metaid="f41507bb-f146-4e38-a834-64dc68ceed40" name="alanine_racemase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010700</p> + <p>SUBSYSTEM: Alanine_and_Aspartate_Metabolism</p> + <p>EC_NUMBER: 5.1.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f41507bb-f146-4e38-a834-64dc68ceed40"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010700"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDCPPtppi" metaid="_43042d06-07b1-4ee3-9e5a-e3da8c996d33" name="undecaprenyl_phosphate_transport__cytoplasm_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_43042d06-07b1-4ee3-9e5a-e3da8c996d33"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpp_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_udcpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP2" metaid="_00f0b404-4433-4991-b1ea-6ba5460196bd" name="R_NTPP2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_015800 ) OR ( XFCFBP8418_023820 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00f0b404-4433-4991-b1ea-6ba5460196bd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023820"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP1" metaid="_6404b198-63b5-426c-a670-f1f20da40309" name="R_NTPP1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_015800 ) OR ( XFCFBP8418_023820 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6404b198-63b5-426c-a670-f1f20da40309"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023820"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dgtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dgmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHTNDA2" metaid="_1f4c0b90-0cb9-448e-ba07-43b65152c5a9" name="R_CHTNDA2" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021670</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.5.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1f4c0b90-0cb9-448e-ba07-43b65152c5a9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021670"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_chitos_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPTRS" metaid="cece8e95-5d53-4e5d-b26e-419e911c3979" name="Aspartyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_016880</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cece8e95-5d53-4e5d-b26e-419e911c3979"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016880"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaasp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_asptrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_glc_D_e" metaid="d8bc6d91-13e2-422c-ad0b-731ac272e030" name="R_EX_glc_D_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d8bc6d91-13e2-422c-ad0b-731ac272e030"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRAI" metaid="_0b7be11a-f50b-43a9-88c3-8f0bf41f3c55" name="phosphoribosylanthranilate_isomerase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026720</p> + <p>SUBSYSTEM: Tyrosine__tryptophan__and_phenylalanine_metabolism</p> + <p>EC_NUMBER: 5.3.1.24</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b7be11a-f50b-43a9-88c3-8f0bf41f3c55"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.24"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pran_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2cpr5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MSO3abcpp" metaid="_677c2f8c-7961-4be8-b1d7-5a0b60fb21a8" name="methanesulfonate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007680 ) OR ( XFCFBP8418_009840 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_677c2f8c-7961-4be8-b1d7-5a0b60fb21a8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009840"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mso3_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mso3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHQS" metaid="c8451369-a3cb-451c-a1ab-747dc7433c89" name="3_dehydroquinate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004170</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.3.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c8451369-a3cb-451c-a1ab-747dc7433c89"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.3.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2dda7p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3dhq_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE140" metaid="cfb3384a-9b94-4fd2-ba77-9cd1ab312909" name="R_FACOAE140" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cfb3384a-9b94-4fd2-ba77-9cd1ab312909"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tdcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ttdca_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_5DGLCNR" metaid="_8e3baeca-0b92-41fd-98d5-bf72e1a03b07" name="5_dehydro_D_gluconate_reductase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.1.1.69</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8e3baeca-0b92-41fd-98d5-bf72e1a03b07"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.69"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5dglcn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glcn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE141" metaid="_9af9b25b-0657-4114-b578-efca4a85f6a7" name="R_FACOAE141" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9af9b25b-0657-4114-b578-efca4a85f6a7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdecoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ttdcea_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NAMNPP" metaid="_829a24cf-0b33-4fb2-af68-514ec3e938ae" name="R_NAMNPP" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024030</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_829a24cf-0b33-4fb2-af68-514ec3e938ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nicrnt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GDPTPDP" metaid="_01138718-ee8e-47e9-b1f4-f8562732613d" name="guanosine_3_diphosphate_5_triphosphate_3_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_008750</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.7.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01138718-ee8e-47e9-b1f4-f8562732613d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.7.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdptp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD100" metaid="d9b5e3b1-62f4-42c4-867c-c89d6e183f6b" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C10_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d9b5e3b1-62f4-42c4-867c-c89d6e183f6b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hdecACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tdec2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_COLIPAabcpp" metaid="_4af05ec1-1bed-4aba-a2cb-d0dbf9ec9c36" name="core_oligosaccharide_lipid_A_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4af05ec1-1bed-4aba-a2cb-d0dbf9ec9c36"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL161t2pp" metaid="a06a1dff-b332-4665-882d-c20f8bafdd8f" name="fatty_acid_CoA_ligase__hexadecenoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a06a1dff-b332-4665-882d-c20f8bafdd8f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdcea_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RIBtex" metaid="_4ddf94c1-6b92-40b8-aa6a-bdd0d4400dc5" name="R_RIBtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4ddf94c1-6b92-40b8-aa6a-bdd0d4400dc5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_rib_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_rib_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_gln_L_e" metaid="_597c5adc-db49-44d2-94f1-b67ad04a0da4" name="R_EX_gln_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_597c5adc-db49-44d2-94f1-b67ad04a0da4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_gln_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OTOTt2_2tex" metaid="a210e18a-5994-4374-94bd-72287fee0ca0" name="R_OTOTt2_2tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a210e18a-5994-4374-94bd-72287fee0ca0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orot_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orot_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_ADE" metaid="b3e3b004-8105-4516-a6e1-7f94dcafe766" name="R_DM_ADE" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b3e3b004-8105-4516-a6e1-7f94dcafe766"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ade_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OMPDC" metaid="d93dc4e1-edfc-4c32-85ab-7653f4ed523a" name="orotidine_5__phosphate_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014470</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d93dc4e1-edfc-4c32-85ab-7653f4ed523a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014470"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_orot5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CCGS" metaid="aeefd093-9780-4f3a-a4bc-c4b1b159b5ce" name="7_cyano_7_carbaguanine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_016870</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#aeefd093-9780-4f3a-a4bc-c4b1b159b5ce"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_preq0_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TSULtex" metaid="ec927e32-cf1d-4c73-918a-72f5029322db" name="thiosulfate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ec927e32-cf1d-4c73-918a-72f5029322db"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tsul_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tsul_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DATPHs" metaid="_2b1cac90-06fb-4bc4-b049-4dd1f620efa8" name="R_DATPHs" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2b1cac90-06fb-4bc4-b049-4dd1f620efa8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_datp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ditp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PTRCt2pp" metaid="e78db6cd-0657-4fea-8f01-81c6ec2b22c9" name="putrescine_transport_in_via_proton_symport" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_020210 ) OR ( XFCFBP8418_020220 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e78db6cd-0657-4fea-8f01-81c6ec2b22c9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020210"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020220"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ptrc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ptrc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACMAMUT" metaid="e95f5e68-9ab6-4458-a480-f20dfe2db6e7" name="R_ACMAMUT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021400</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.4.1.180</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e95f5e68-9ab6-4458-a480-f20dfe2db6e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.180"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021400"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_unaga_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uacmamu_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_unagamu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EGMEACPR" metaid="_67a233e0-d4ee-4dc9-942d-b1e17c4c40db" name="Enoylglutaryl__ACP__methyl_ester_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_67a233e0-d4ee-4dc9-942d-b1e17c4c40db"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_egmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gmeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOXR2" metaid="_96cc1688-4359-4703-84b6-1435cb691796" name="L_methionine_R_sulfoxide_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010720 AND XFCFBP8418_013260</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 1.8.4.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96cc1688-4359-4703-84b6-1435cb691796"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_metsox_R_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOXR1" metaid="_5df23b30-a3f6-4676-921e-54191df808b1" name="L_methionine_S_oxide_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000660 AND XFCFBP8418_013260</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 1.8.4.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5df23b30-a3f6-4676-921e-54191df808b1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000660"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_metsox_S_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EPStppXF" metaid="_5fb48694-ac9e-4ed6-b99d-173ee6449183" name="R_EPStppXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021420 AND XFCFBP8418_021460 AND XFCFBP8418_021480</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5fb48694-ac9e-4ed6-b99d-173ee6449183"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021480"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021460"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_EPS_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_EPS_XF_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KDOPS" metaid="fafc6c96-1fa9-43ae-9ec8-ef503665762a" name="3_deoxy__D_manno_octulosonic__acid_8_phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022230</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.55</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fafc6c96-1fa9-43ae-9ec8-ef503665762a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.55"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022230"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ara5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_kdo8p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLTGY3pp" metaid="_8c2d34c8-0575-45ca-9afa-b2bb6aa92508" name="murein_lytic_transglycosylase__murein3p3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_003940 ) OR ( XFCFBP8418_019770 )</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8c2d34c8-0575-45ca-9afa-b2bb6aa92508"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019770"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein3p3p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm3p_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_cit_e" metaid="_4102b033-7400-4144-a90c-dd4e3e8e846d" name="R_EX_cit_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4102b033-7400-4144-a90c-dd4e3e8e846d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_cit_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_KDOPP" metaid="_3232385a-d5de-435f-91cd-5bc3226f132f" name="3_deoxy_manno_octulosonate_8_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003480</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.3.45</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3232385a-d5de-435f-91cd-5bc3226f132f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.45"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo8p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_kdo_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INS2D" metaid="_23902905-3c66-4f67-8f44-a07f6f2b556d" name="inositol_2_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.1.1.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_23902905-3c66-4f67-8f44-a07f6f2b556d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_inost_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2ins_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR160x" metaid="fb6781bf-f459-4e4d-9c02-b1ab55166450" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fb6781bf-f459-4e4d-9c02-b1ab55166450"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tpalm2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_palmACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUMt2_2pp" metaid="_9bfdf378-c0f2-4e54-baac-18954903679e" name="Fumarate_transport_via_proton_symport__2_H___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025480</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9bfdf378-c0f2-4e54-baac-18954903679e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fum_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTRLASE" metaid="_100a3131-464c-4fe3-8fbc-96b217be9163" name="nitrilase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004900</p> + <p>SUBSYSTEM: Nitrile_degradation</p> + <p>EC_NUMBER: 3.5.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_100a3131-464c-4fe3-8fbc-96b217be9163"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_ind3acnl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ind3ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Bztpp" metaid="_285c7944-ea46-46e8-a16c-61123969b4dc" name="R_Bztpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_285c7944-ea46-46e8-a16c-61123969b4dc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_bz_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_bz_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS60" metaid="_34b80282-f769-4dfd-ba18-8049c74ec799" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C6_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34b80282-f769-4dfd-ba18-8049c74ec799"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_butACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ohexACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE160" metaid="_72efae78-afaa-4b0f-9a5f-547547ffbf40" name="R_FACOAE160" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_72efae78-afaa-4b0f-9a5f-547547ffbf40"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pmtcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hdca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ATPM" metaid="_4185d916-7cbb-46e0-adea-86c5eacb2919" name="R_ATPM" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Biomass_and_maintenance_functions</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4185d916-7cbb-46e0-adea-86c5eacb2919"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METabcpp" metaid="_00d49cea-7b15-48c0-bf8b-d807fb1545ac" name="L_methionine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010500 AND XFCFBP8418_010510 AND XFCFBP8418_010520</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00d49cea-7b15-48c0-bf8b-d807fb1545ac"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010520"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CA2tpp" metaid="_8a8e45aa-9098-4c26-a506-006e63380941" name="R_CA2tpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8a8e45aa-9098-4c26-a506-006e63380941"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ca2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ca2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE161" metaid="_366b4b50-2bdd-4dbf-95b4-4182b08ec755" name="R_FACOAE161" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_366b4b50-2bdd-4dbf-95b4-4182b08ec755"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdcoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hdcea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ME2" metaid="e38276c1-2ba0-4f9f-a4c3-3f01ca1a8cc3" name="malic_enzyme__NADP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025470</p> + <p>SUBSYSTEM: Anaplerotic_Reactions</p> + <p>EC_NUMBER: 1.1.1.40</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e38276c1-2ba0-4f9f-a4c3-3f01ca1a8cc3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.40"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025470"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mal_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SERabcpp" metaid="_9dd1c7b0-5fe9-488f-895a-52c4f7706186" name="R_SERabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9dd1c7b0-5fe9-488f-895a-52c4f7706186"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHAD2" metaid="b47e0de9-8e54-4c25-9acb-8fa599657aa4" name="Dihydroxy_acid_dehydratase__2_3_dihydroxy_3_methylpentanoate_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014980</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b47e0de9-8e54-4c25-9acb-8fa599657aa4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_23dhmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3mop_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UPP3S" metaid="_0b5f9b39-03a1-424b-a3d8-378a01607d24" name="uroporphyrinogen_III_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.75</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b5f9b39-03a1-424b-a3d8-378a01607d24"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.75"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018150"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hmbil_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uppg3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FLVR" metaid="_323efc0c-f6dc-4c47-9449-08a6f6e35350" name="R_FLVR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002700 AND XFCFBP8418_002710</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.5.1.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_323efc0c-f6dc-4c47-9449-08a6f6e35350"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002710"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002700"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ribflv_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rbflvrd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHAD1" metaid="_77cebed7-605b-47bd-a764-4b13caba5e3c" name="dihydroxy_acid_dehydratase__2_3_dihydroxy_3_methylbutanoate_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014980</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_77cebed7-605b-47bd-a764-4b13caba5e3c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_23dhmb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3mob_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NADS2" metaid="_99c270f2-750c-4259-b953-d14e2c9425e3" name="NAD_synthase__glutamine_hydrolysing_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_99c270f2-750c-4259-b953-d14e2c9425e3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dnad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SPS" metaid="_51b0db8a-aa4b-4a35-a77b-266a4ff17bfe" name="R_SPS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010390</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.4.1.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_51b0db8a-aa4b-4a35-a77b-266a4ff17bfe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.1.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_suc6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SEAHCYSHYD" metaid="_1c78443e-bf0c-4b1f-a8cb-2c48272a0288" name="Se_Adenosylselenohomocysteine_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024950</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.3.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1c78443e-bf0c-4b1f-a8cb-2c48272a0288"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.3.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_seahcys_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_selhcys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_U23GAATXF" metaid="_5ed5820f-384c-4032-a184-2e2bb929b8b9" name="R_U23GAATXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024880</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.191</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ed5820f-384c-4032-a184-2e2bb929b8b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.191"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024880"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hddecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_u3hga_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_u23ga_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDH" metaid="e8b66e0a-dc88-46b6-b724-c95e46904c14" name="malate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023000</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 1.1.1.37</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e8b66e0a-dc88-46b6-b724-c95e46904c14"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.37"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023000"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mal_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDSKXF" metaid="e05c0ff9-f3ee-44e4-ae6c-5a8af1fcdd02" name="R_TDSKXF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024520</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.130</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e05c0ff9-f3ee-44e4-ae6c-5a8af1fcdd02"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.130"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024520"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_lipidAds_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lipidA_XF_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DPCOAK" metaid="_72098093-e1d9-4f34-a7c1-7fa433fa2788" name="dephospho_CoA_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011870</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.24</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_72098093-e1d9-4f34-a7c1-7fa433fa2788"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.24"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011870"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dpcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLTN2pp" metaid="_3a2cf021-2280-4af5-845b-33197249f1e9" name="gluconolactonase__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022170</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.1.1.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3a2cf021-2280-4af5-845b-33197249f1e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g15l_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glcn_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRabcpp" metaid="d6621e0d-c54a-4e88-9392-506216b82986" name="R_THRabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d6621e0d-c54a-4e88-9392-506216b82986"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thr_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thr_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYC2Pabcpp" metaid="d2c55c67-7451-45ff-b341-7488e1a4909a" name="sn_Glycerol_2_phosphate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d2c55c67-7451-45ff-b341-7488e1a4909a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc2p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc2p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSSr2" metaid="_36a33785-355e-44d9-b292-1c881970cfcb" name="R_CYSSr2" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006490 ) OR ( XFCFBP8418_010590 ) OR ( XFCFBP8418_010980 )</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 2.5.1.47</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_36a33785-355e-44d9-b292-1c881970cfcb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.47"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010590"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010980"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006490"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acser_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPA2" metaid="_7faf16e3-0feb-400d-8cdd-1c9c8f111457" name="inorganic_triphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_010630 ) OR ( XFCFBP8418_012360 )</p> + <p>SUBSYSTEM: Anaplerotic_Reactions</p> + <p>EC_NUMBER: 3.6.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7faf16e3-0feb-400d-8cdd-1c9c8f111457"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012360"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pppi_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_COLIPAabctex" metaid="_02c0cfcc-783a-4ca4-8d3e-31820d1f8dd9" name="R_COLIPAabctex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003500 AND XFCFBP8418_003510 AND XFCFBP8418_015320 AND XFCFBP8418_015330</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_02c0cfcc-783a-4ca4-8d3e-31820d1f8dd9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015320"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DMATT" metaid="_2aa97013-926a-4b5f-9998-5ed411e27b82" name="dimethylallyltranstransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005980</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2aa97013-926a-4b5f-9998-5ed411e27b82"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dmpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ipdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPt2_3pp" metaid="c4005074-397f-4200-9656-c1c1ff3a45de" name="R_ASPt2_3pp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c4005074-397f-4200-9656-c1c1ff3a45de"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_asp_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSTRS" metaid="c903eca2-cd93-4a27-b834-d0044c22820c" name="Cysteinyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025320</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c903eca2-cd93-4a27-b834-d0044c22820c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025320"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnacys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cystrna_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPGPPDP" metaid="_5e5254d2-8d42-429d-94f9-fac11e594eef" name="guanosine_3__5__bis_diphosphate__3__diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_008750</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.7.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5e5254d2-8d42-429d-94f9-fac11e594eef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.7.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppgpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR161x" metaid="_3766821c-aafe-44f0-bfee-3a2b6449de7f" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3766821c-aafe-44f0-bfee-3a2b6449de7f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c9palmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_pi_e" metaid="_572cf404-6cb2-432d-9834-ea31cca085e0" name="R_EX_pi_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_572cf404-6cb2-432d-9834-ea31cca085e0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_pi_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RFAMPtpp" metaid="d8ed4b2f-81a6-4b6c-bb5e-dbdf61b056f3" name="Rifampin_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d8ed4b2f-81a6-4b6c-bb5e-dbdf61b056f3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_rfamp_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rfamp_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK180" metaid="_68cf3dab-f648-4345-ad8b-80f10c25045f" name="diacylglycerol_kinase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_68cf3dab-f648-4345-ad8b-80f10c25045f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CITt10" metaid="c5c7be53-9be9-4db8-bea3-ef614b2faa48" name="R_CITt10" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025570</p> + <p>SUBSYSTEM: Transport</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c5c7be53-9be9-4db8-bea3-ef614b2faa48"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cit_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_mg2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cit_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mg2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK181" metaid="_29e19ab5-e127-4ed0-a7bc-0a8d226d4b3e" name="diacylglycerol_kinase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_29e19ab5-e127-4ed0-a7bc-0a8d226d4b3e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_12dgr181_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GUAPRT" metaid="_8757a5bb-8bc0-4c66-8411-7747b3c46cad" name="guanine_phosphoribosyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021340</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.4.2.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8757a5bb-8bc0-4c66-8411-7747b3c46cad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gua_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G6PDA" metaid="_55f550d4-f869-44f9-a823-a6eb46a855aa" name="R_G6PDA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_55f550d4-f869-44f9-a823-a6eb46a855aa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gam6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CO2tpp" metaid="_592d5d7c-c23c-49c8-af79-69a9a21a2fda" name="CO2_transporter_via_diffusion__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_592d5d7c-c23c-49c8-af79-69a9a21a2fda"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_co2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IMPC" metaid="_7d0bf977-e0f9-4ab5-af73-71af1b9a3d62" name="IMP_cyclohydrolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001030</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 3.5.4.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7d0bf977-e0f9-4ab5-af73-71af1b9a3d62"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fprica_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IMPD" metaid="_72dca34a-c389-4260-9c38-045ec53ce65b" name="IMP_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004780</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.205</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_72dca34a-c389-4260-9c38-045ec53ce65b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.205"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004780"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR120tipp" metaid="_2f365b72-eab7-4293-8e61-d3977b9fa9bb" name="R_12DGR120tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2f365b72-eab7-4293-8e61-d3977b9fa9bb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr120_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr120_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MCTP1App" metaid="_1a4b0402-ae16-41d7-98d1-c957b449ea7f" name="murein_crosslinking_transpeptidase_1A__A2pm__D_ala___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004370 ) OR ( XFCFBP8418_008630 ) OR ( XFCFBP8418_010420 ) OR ( XFCFBP8418_011310 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1a4b0402-ae16-41d7-98d1-c957b449ea7f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004370"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011310"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTP5" metaid="b143a1d1-0d57-43a7-85d4-71709412e774" name="R_NTP5" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006890</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b143a1d1-0d57-43a7-85d4-71709412e774"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHDPRy" metaid="_77a79940-cd78-46f6-ab2d-c08956d165d6" name="dihydrodipicolinate_reductase__NADPH_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023980</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 1.17.1.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_77a79940-cd78-46f6-ab2d-c08956d165d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.1.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023980"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_23dhdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SUCD1" metaid="_9a77c6f3-76f5-4645-8c68-52b4ee104b38" name="succinate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024610 AND XFCFBP8418_024620 AND XFCFBP8418_024640</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 1.3.99.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a77c6f3-76f5-4645-8c68-52b4ee104b38"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024610"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024620"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024640"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HISTP" metaid="b1733f22-e0c4-4eb7-96f9-649bb21770c6" name="histidinol_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020300</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 3.1.3.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b1733f22-e0c4-4eb7-96f9-649bb21770c6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020300"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hisp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_histd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NMNDA" metaid="_61a7656c-7c46-4733-b4bd-1793d3d8fb5c" name="R_NMNDA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014880</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.5.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_61a7656c-7c46-4733-b4bd-1793d3d8fb5c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014880"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nicrnt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTP1" metaid="d3528cbd-6c40-449d-bba4-dd0cd8970553" name="R_NTP1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006890</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d3528cbd-6c40-449d-bba4-dd0cd8970553"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE180" metaid="ada0daac-03d6-4b7a-9282-497bb1c97f15" name="R_FACOAE180" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ada0daac-03d6-4b7a-9282-497bb1c97f15"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_stcoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ocdca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XF_Biomass" metaid="_7225f85e-e5f6-4220-ad18-5b756a79b0ba" name="R_XF_Biomass" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Biomass_and_maintenance_functions</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7225f85e-e5f6-4220-ad18-5b756a79b0ba"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pe181_c" stoichiometry="0.007742407"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_pe160_c" stoichiometry="0.019313938"/> + <speciesReference constant="true" species="M_mobd_c" stoichiometry="7.37685E-6"/> + <speciesReference constant="true" species="M_spmd_c" stoichiometry="0.007535445"/> + <speciesReference constant="true" species="M_pe160_p" stoichiometry="0.049664413"/> + <speciesReference constant="true" species="M_pe181_p" stoichiometry="0.019909046"/> + <speciesReference constant="true" species="M_ni2_c" stoichiometry="0.000343024"/> + <speciesReference constant="true" species="M_thrtrna_c" stoichiometry="0.248213969"/> + <speciesReference constant="true" species="M_clpn160_p" stoichiometry="0.004598497"/> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="0.0002495333"/> + <speciesReference constant="true" species="M_murein3p3p_p" stoichiometry="0.001503009"/> + <speciesReference constant="true" species="M_chor_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_leutrna_c" stoichiometry="0.440920172"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_lipopb_c" stoichiometry="3.35193E-6"/> + <speciesReference constant="true" species="M_clpn181_p" stoichiometry="0.001843406"/> + <speciesReference constant="true" species="M_murein4p4p_p" stoichiometry="0.006012037"/> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_asptrna_c" stoichiometry="0.236169831"/> + <speciesReference constant="true" species="M_glutrna_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="0.00018715"/> + <speciesReference constant="true" species="M_dgtp_c" stoichiometry="0.03649201"/> + <speciesReference constant="true" species="M_cobalt2_c" stoichiometry="2.67411E-5"/> + <speciesReference constant="true" species="M_pydx5p_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_asntrna_c" stoichiometry="0.236169831"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="50.119554117"/> + <speciesReference constant="true" species="M_glntrna_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_phetrna_c" stoichiometry="0.181185724"/> + <speciesReference constant="true" species="M_cystrna_c" stoichiometry="0.089545546"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="4.99065E-5"/> + <speciesReference constant="true" species="M_pg160_c" stoichiometry="0.008913919"/> + <speciesReference constant="true" species="M_pg181_c" stoichiometry="0.003573336"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="0.007137104"/> + <speciesReference constant="true" species="M_so4_c" stoichiometry="0.004610532"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="0.000124766"/> + <speciesReference constant="true" species="M_valtrna_c" stoichiometry="0.414213606"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="0.000374299"/> + <speciesReference constant="true" species="M_murein4px4p_p" stoichiometry="0.006087187"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="0.013831597"/> + <speciesReference constant="true" species="M_zn2_c" stoichiometry="0.000362388"/> + <speciesReference constant="true" species="M_btn_c" stoichiometry="2.23462E-6"/> + <speciesReference constant="true" species="M_hemeO_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="50"/> + <speciesReference constant="true" species="M_pg181_p" stoichiometry="0.003062854"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="0.000311916"/> + <speciesReference constant="true" species="M_pg160_p" stoichiometry="0.007640488"/> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="6.1846E-5"/> + <speciesReference constant="true" species="M_mg2_c" stoichiometry="0.009221064"/> + <speciesReference constant="true" species="M_4fe4s_c" stoichiometry="0.000276632"/> + <speciesReference constant="true" species="M_glytrna_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_dttp_c" stoichiometry="0.032752791"/> + <speciesReference constant="true" species="M_pe161_c" stoichiometry="0.015021952"/> + <speciesReference constant="true" species="M_thmpp_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_protrna_c" stoichiometry="0.216270821"/> + <speciesReference constant="true" species="M_amet_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_sertrna_c" stoichiometry="0.211034239"/> + <speciesReference constant="true" species="M_pe161_p" stoichiometry="0.038627877"/> + <speciesReference constant="true" species="M_datp_c" stoichiometry="0.032752791"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="0.135598794"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="0.001996262"/> + <speciesReference constant="true" species="M_OLPS_XF_p" stoichiometry="9.503875E-5"/> + <speciesReference constant="true" species="M_alatrna_c" stoichiometry="0.502711835"/> + <speciesReference constant="true" species="M_iletrna_c" stoichiometry="0.284346382"/> + <speciesReference constant="true" species="M_lystrna_c" stoichiometry="0.33618854"/> + <speciesReference constant="true" species="M_succoa_c" stoichiometry="0.000109794"/> + <speciesReference constant="true" species="M_tyrtrna_c" stoichiometry="0.135103806"/> + <speciesReference constant="true" species="M_clpn161_p" stoichiometry="0.003576609"/> + <speciesReference constant="true" species="M_utp_c" stoichiometry="0.124906971"/> + <speciesReference constant="true" species="M_ribflv_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_dctp_c" stoichiometry="0.03649201"/> + <speciesReference constant="true" species="M_pg161_c" stoichiometry="0.006933048"/> + <speciesReference constant="true" species="M_ptrc_c" stoichiometry="0.037173471"/> + <speciesReference constant="true" species="M_murein3px4p_p" stoichiometry="0.000676354"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="0.146535029"/> + <speciesReference constant="true" species="M_trptrna_c" stoichiometry="0.055507765"/> + <speciesReference constant="true" species="M_mn2_c" stoichiometry="0.000734919"/> + <speciesReference constant="true" species="M_fe3_c" stoichiometry="0.008298958"/> + <speciesReference constant="true" species="M_pheme_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_5mthf_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_cl_c" stoichiometry="0.005532639"/> + <speciesReference constant="true" species="M_k_c" stoichiometry="0.207473951"/> + <speciesReference constant="true" species="M_argtrna_c" stoichiometry="0.289582963"/> + <speciesReference constant="true" species="M_2fe2s_c" stoichiometry="2.76632E-5"/> + <speciesReference constant="true" species="M_sheme_c" stoichiometry="0.000249533"/> + <speciesReference constant="true" species="M_cu2_c" stoichiometry="0.000753361"/> + <speciesReference constant="true" species="M_malcoa_c" stoichiometry="3.49346E-5"/> + <speciesReference constant="true" species="M_pg161_p" stoichiometry="0.005942602"/> + <speciesReference constant="true" species="M_ca2_c" stoichiometry="0.005532639"/> + <speciesReference constant="true" species="M_murein4px4px4p_p" stoichiometry="0.000751505"/> + <speciesReference constant="true" species="M_mettrna_c" stoichiometry="0.150289892"/> + <speciesReference constant="true" species="M_histrna_c" stoichiometry="0.092687495"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_trnahis_c" stoichiometry="0.092687495"/> + <speciesReference constant="true" species="M_trnaile_c" stoichiometry="0.284346382"/> + <speciesReference constant="true" species="M_trnathr_c" stoichiometry="0.248213969"/> + <speciesReference constant="true" species="M_trnamet_c" stoichiometry="0.150289892"/> + <speciesReference constant="true" species="M_trnaser_c" stoichiometry="0.211034239"/> + <speciesReference constant="true" species="M_trnaasp_c" stoichiometry="0.236169831"/> + <speciesReference constant="true" species="M_trnatrp_c" stoichiometry="0.055507765"/> + <speciesReference constant="true" species="M_trnaasn_c" stoichiometry="0.236169831"/> + <speciesReference constant="true" species="M_trnatyr_c" stoichiometry="0.135103806"/> + <speciesReference constant="true" species="M_trnaleu_c" stoichiometry="0.440920172"/> + <speciesReference constant="true" species="M_trnalys_c" stoichiometry="0.33618854"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="50"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="0.6650845"/> + <speciesReference constant="true" species="M_trnaarg_c" stoichiometry="0.289582963"/> + <speciesReference constant="true" species="M_trnaala_c" stoichiometry="0.502711835"/> + <speciesReference constant="true" species="M_BIOMASS_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnapro_c" stoichiometry="0.216270821"/> + <speciesReference constant="true" species="M_trnacys_c" stoichiometry="0.089545546"/> + <speciesReference constant="true" species="M_trnagln_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_trnaphe_c" stoichiometry="0.181185724"/> + <speciesReference constant="true" species="M_trnagly_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_trnaval_c" stoichiometry="0.414213606"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="50"/> + <speciesReference constant="true" species="M_trnaglu_c" stoichiometry="0.257639815"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="50"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTP3" metaid="a3a03ffb-6814-4b72-b7a4-725dbf6f2e0b" name="R_NTP3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006890</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a3a03ffb-6814-4b72-b7a4-725dbf6f2e0b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GARFT" metaid="_0c8663e6-6905-42bb-a508-820611839b50" name="phosphoribosylglycinamide_formyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006660</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 2.1.2.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0c8663e6-6905-42bb-a508-820611839b50"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006660"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gar_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fgam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE181" metaid="_4e8d1c7d-c92c-4e77-a531-effa1667dac1" name="R_FACOAE181" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4e8d1c7d-c92c-4e77-a531-effa1667dac1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_odecoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdcea_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_4HTHRS" metaid="b2cafea3-8726-4784-a4a2-48fa2a8aac8c" name="R_4HTHRS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020360</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b2cafea3-8726-4784-a4a2-48fa2a8aac8c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phthr_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4hthr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAS80" metaid="ada9e98b-8a39-4be5-b056-306a508a168b" name="3_oxoacyl__acyl_carrier_protein__synthase__n_C8_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005890</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ada9e98b-8a39-4be5-b056-306a508a168b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_malACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hexACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ooctACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2Otex" metaid="_2be83b09-483b-4a46-9dd0-31a07515d995" name="H2O_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2be83b09-483b-4a46-9dd0-31a07515d995"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_ac_e" metaid="_7ec6edd5-b5d3-48a6-9815-9a46c1f4fcc0" name="R_EX_ac_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7ec6edd5-b5d3-48a6-9815-9a46c1f4fcc0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_ac_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPCTn" metaid="_108332eb-3f81-4162-b8e3-1bcd0dc6caa3" name="R_ASPCTn" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( No_Assignment AND XFCFBP8418_020390 ) OR ( XFCFBP8418_020390 )</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 2.1.3.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_108332eb-3f81-4162-b8e3-1bcd0dc6caa3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.3.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020390"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020390"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cbp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cbasp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HISTD" metaid="b55307a6-0e24-4c04-a18a-50fb06f80c9e" name="histidinol_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020320</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b55307a6-0e24-4c04-a18a-50fb06f80c9e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020320"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_histd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_his_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NO3abcpp" metaid="_9522d0b7-f772-47d2-a160-5075d1284f88" name="Nitrate_ABC_transport" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007680</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 3.6.3.26</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9522d0b7-f772-47d2-a160-5075d1284f88"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.26"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_no3_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_no3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HDCEAtexi" metaid="_23f15e46-b806-4dd5-8ede-cad6055826b4" name="R_HDCEAtexi" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_23f15e46-b806-4dd5-8ede-cad6055826b4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdcea_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hdcea_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PYNP2r" metaid="d6acaab4-06bd-4525-97c8-5c45785d9e5e" name="pyrimidine_nucleoside_phosphorylase__uracil_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.4.2.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d6acaab4-06bd-4525-97c8-5c45785d9e5e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uri_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ura_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_r1p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METOX2s" metaid="_3599ab7d-5ca1-4f48-a7d6-a92fe92064c9" name="methionine_oxidation_2__spontaneous_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3599ab7d-5ca1-4f48-a7d6-a92fe92064c9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_metsox_R_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IGPDH" metaid="faddba79-b4a3-4926-bce0-a53eb0bca6b4" name="imidazoleglycerol_phosphate_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020300</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 4.2.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#faddba79-b4a3-4926-bce0-a53eb0bca6b4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020300"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_eig3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_imacp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP8" metaid="c6e6c163-fb35-4065-9483-b861979d1fb8" name="R_NTPP8" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c6e6c163-fb35-4065-9483-b861979d1fb8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP7" metaid="_046bdf28-c0e5-4faf-83a5-02f473f3fdb9" name="R_NTPP7" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_046bdf28-c0e5-4faf-83a5-02f473f3fdb9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dttp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_s_e" metaid="d58ebf7a-8409-4264-993d-2093e0bf8638" name="R_EX_s_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d58ebf7a-8409-4264-993d-2093e0bf8638"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_s_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP9" metaid="_191b40e0-ca4d-44a4-9c02-9d8ce4932b14" name="Nucleoside_triphosphate_pyrophosphorylase__itp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002620</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_191b40e0-ca4d-44a4-9c02-9d8ce4932b14"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_itp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP4" metaid="_7ab016f3-69ae-4eed-8885-9d94da6b251a" name="Nucleoside_triphosphate_pyrophosphorylase__ctp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7ab016f3-69ae-4eed-8885-9d94da6b251a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LACZpp" metaid="e5b8a7d7-1c63-468e-a49a-389a1d5f2d2d" name="R_LACZpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007430</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.108</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e5b8a7d7-1c63-468e-a49a-389a1d5f2d2d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.108"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007430"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_lcts_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gal_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glc_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SUCDi" metaid="ae9654e3-8ff5-405c-8ebc-a113bfcad1e6" name="succinate_dehydrogenase__irreversible_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024610 AND XFCFBP8418_024620 AND XFCFBP8418_024640</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 1.3.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae9654e3-8ff5-405c-8ebc-a113bfcad1e6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024610"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024620"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024640"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP3" metaid="ba93ca71-afa0-469e-9d7f-1bd91cd4434a" name="Nucleoside_triphosphate_pyrophosphorylase__dctp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ba93ca71-afa0-469e-9d7f-1bd91cd4434a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP6" metaid="ed757e09-76c6-4cca-8623-918f4efc4b9b" name="R_NTPP6" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ed757e09-76c6-4cca-8623-918f4efc4b9b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTPP5" metaid="f14e6afc-e004-4b73-8d6d-6c8c0bb24d7e" name="Nucleoside_triphosphate_pyrophosphorylase__datp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015800</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f14e6afc-e004-4b73-8d6d-6c8c0bb24d7e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_datp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_damp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METDabcpp" metaid="_9bc8d89b-7d82-4017-b7e1-0759a6ae5774" name="R_METDabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010500 AND XFCFBP8418_010510 AND XFCFBP8418_010520</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9bc8d89b-7d82-4017-b7e1-0759a6ae5774"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010520"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PG160abcpp" metaid="_86d0bbc7-9a05-4fd3-935a-bcf7aa6d3150" name="phosphatidylglycerol_transport_via_ABC_system__n_C16_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_86d0bbc7-9a05-4fd3-935a-bcf7aa6d3150"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg160_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ATPS4rpp" metaid="f0bf626d-9959-4d50-b908-57a66d78dd55" name="ATP_synthase__four_protons_for_one_ATP___periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023580 AND XFCFBP8418_023590 AND XFCFBP8418_023600 AND XFCFBP8418_023610 AND XFCFBP8418_023620 AND XFCFBP8418_023630 AND XFCFBP8418_023640 AND XFCFBP8418_023650</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 3.6.3.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f0bf626d-9959-4d50-b908-57a66d78dd55"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023600"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023620"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023610"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023590"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023580"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023640"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023630"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023650"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AMAOTr" metaid="e6386201-1524-44f5-bc9e-ff5b5450bfa2" name="adenosylmethionine_8_amino_7_oxononanoate_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015830</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.6.1.62</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e6386201-1524-44f5-bc9e-ff5b5450bfa2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.62"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015830"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_8aonn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amob_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dann_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OAAt2_2pp" metaid="_5b7ec468-c57e-4f07-8b94-82144d9e3605" name="R_OAAt2_2pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025480</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5b7ec468-c57e-4f07-8b94-82144d9e3605"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + <speciesReference constant="true" species="M_oaa_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NH3c" metaid="cf25787d-b625-4e50-854a-5f0419385415" name="R_NH3c" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cf25787d-b625-4e50-854a-5f0419385415"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nh3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ENOPH" metaid="ab9e5532-81ce-4b2e-8009-a6f5c6645073" name="R_ENOPH" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020250</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 3.1.3.77</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ab9e5532-81ce-4b2e-8009-a6f5c6645073"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.77"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dkmpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhmtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CPPPGO2" metaid="_328d0e4c-75eb-41bd-8f17-10156c122052" name="Oxygen_Independent_coproporphyrinogen_III_oxidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002610</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.99.22</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_328d0e4c-75eb-41bd-8f17-10156c122052"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.22"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002610"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cpppg3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_amet_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dad_5_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pppg9_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_xyl_D_e" metaid="_2d657b08-0cfe-4ab3-852f-cb44d3994a2d" name="R_EX_xyl_D_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2d657b08-0cfe-4ab3-852f-cb44d3994a2d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_xyl_D_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LSERDHr" metaid="_1b843714-69dc-4846-9dd8-d0bb20effff2" name="R_LSERDHr" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015390</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.276</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1b843714-69dc-4846-9dd8-d0bb20effff2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.276"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2amsa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METOX1s" metaid="fc65cd2a-80ce-466a-bb41-c6bf6e2b84b5" name="methionine_oxidation__spontaneous_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fc65cd2a-80ce-466a-bb41-c6bf6e2b84b5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_metsox_S_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FEENTERtpp" metaid="_6d421127-f3ae-416c-94fc-18eb4cc116eb" name="R_FEENTERtpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025340</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6d421127-f3ae-416c-94fc-18eb4cc116eb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_enter_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_enter_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACt2rpp" metaid="_8f779ea9-4a35-44b7-b02b-61e49784d0bd" name="R_ACt2rpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8f779ea9-4a35-44b7-b02b-61e49784d0bd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ac_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGMT" metaid="e06ab7fc-72b8-431b-a687-75473d1666e8" name="phosphoglucomutase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.4.2.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e06ab7fc-72b8-431b-a687-75473d1666e8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FORtex" metaid="_183f64a9-9808-41f7-b371-de4aeedc25d6" name="formate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_183f64a9-9808-41f7-b371-de4aeedc25d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_for_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_for_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HSERTA" metaid="_68945973-e5de-40c3-8e9d-e68a33ce7a1d" name="homoserine_O_trans_acetylase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005140</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 2.3.1.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_68945973-e5de-40c3-8e9d-e68a33ce7a1d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005140"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hom_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_achms_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDPDRE" metaid="_152490d3-7cf1-43d2-88e2-0766d8ff78d4" name="dTDP_4_dehydrorhamnose_3_5_epimerase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026230</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 5.1.3.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_152490d3-7cf1-43d2-88e2-0766d8ff78d4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.1.3.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026230"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dtdp4d6dg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dtdp4d6dm_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HPPtpp" metaid="_99c34c8b-d2d9-4d75-ba6c-3a468da8bb20" name="3_hydroxypropionate_transport_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_99c34c8b-d2d9-4d75-ba6c-3a468da8bb20"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hpp_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACODA" metaid="_985eba82-78f5-458d-ac11-ad79cdef0c9a" name="acetylornithine_deacetylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025270</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.5.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_985eba82-78f5-458d-ac11-ad79cdef0c9a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025270"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acorn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDEP2pp" metaid="e67186e2-99f1-4d32-b020-4cf5c4182f6c" name="murein_L_D_endopeptidase__murein5px3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e67186e2-99f1-4d32-b020-4cf5c4182f6c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5px3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5p3p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPNCL2" metaid="ac9799a1-9612-46a2-9fcf-eb8e479756a9" name="phosphopantothenate_cysteine_ligase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015430</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac9799a1-9612-46a2-9fcf-eb8e479756a9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015430"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ppan_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ppcys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL160t2pp" metaid="_189bb35a-cccc-4787-93d1-376f4a96741d" name="fatty_acid_CoA_ligase__hexadecanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_189bb35a-cccc-4787-93d1-376f4a96741d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdca_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pmtcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G6PDH2r" metaid="_18f38ad3-0c49-4a07-b92b-0b0a39704b2a" name="glucose_6_phosphate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024680</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 1.1.1.49</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_18f38ad3-0c49-4a07-b92b-0b0a39704b2a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.49"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_6pgl_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR140x" metaid="_41865b96-d697-49fe-a260-28590901b124" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_41865b96-d697-49fe-a260-28590901b124"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tmrs2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_myrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDPDRR" metaid="e4371e03-e60d-4744-a7bf-f8b7297e70bc" name="dTDP_4_dehydrorhamnose_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026220</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.133</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e4371e03-e60d-4744-a7bf-f8b7297e70bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.133"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026220"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtdp4d6dm_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtdprmn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDPGDr" metaid="_581244d5-f3bb-46eb-9469-fd73d7ae2e78" name="UDPglucose_6_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018680</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.22</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_581244d5-f3bb-46eb-9469-fd73d7ae2e78"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.22"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_udpglcur_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLTGY1pp" metaid="_0296d9fc-1f09-40ab-8bf9-59a09c3ba31a" name="murein_lytic_transglycosylase__murein4p4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_003940 ) OR ( XFCFBP8418_019770 )</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0296d9fc-1f09-40ab-8bf9-59a09c3ba31a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019770"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4p4p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PItex" metaid="_3de5ad84-d9ef-4513-b1a1-89ae96a9e24d" name="phosphate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3de5ad84-d9ef-4513-b1a1-89ae96a9e24d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pi_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INSEPIH" metaid="a8f99b02-7604-48a7-acc9-11a945e0f445" name="3D__3_5_4__trihydroxycyclohexane_1_2_dione_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a8f99b02-7604-48a7-acc9-11a945e0f445"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dkdepiins_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dglca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UM3PL" metaid="_99e0cf8b-7c15-4b53-9740-9c2a31a7e1d6" name="UDP_N_acetylmuramate_L_alanyl_gamma_D_glutamyl_meso_diaminopimelate_ligase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026060</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 6.3.2.45</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_99e0cf8b-7c15-4b53-9740-9c2a31a7e1d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.45"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026060"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_LalaDgluMdap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uamr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ugmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHORTS" metaid="_0197284e-9752-40f7-a083-ab13da2f90e4" name="dihydroorotase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025380</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.5.2.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0197284e-9752-40f7-a083-ab13da2f90e4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.2.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhor_S_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cbasp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PRASCS" metaid="_28e8db9c-a6c6-4596-8ddf-48b74c98cd53" name="phosphoribosylaminoimidazolesuccinocarboxamide_synthase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026780</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28e8db9c-a6c6-4596-8ddf-48b74c98cd53"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026780"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5aizc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_25aics_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLNtex" metaid="af01089c-0f17-484a-8e6b-ac20efef9a8f" name="L_glutamine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#af01089c-0f17-484a-8e6b-ac20efef9a8f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gln_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_mn2_e" metaid="_35d09179-85ad-4ed9-982a-a811ce8bfd7d" name="R_EX_mn2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_35d09179-85ad-4ed9-982a-a811ce8bfd7d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_mn2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGP140abcpp" metaid="_64db8afd-c17f-4e58-8243-c385b91488b9" name="phosphatidylglycerophosphate_transport_via_ABC_system__n_C14_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_64db8afd-c17f-4e58-8243-c385b91488b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp140_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_arg_L_e" metaid="_4300546b-8d5e-44b0-a2a6-0312ee8de286" name="R_EX_arg_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4300546b-8d5e-44b0-a2a6-0312ee8de286"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_arg_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SCYSDS" metaid="a0191e6b-2355-48f8-956c-7a99c741781e" name="R_SCYSDS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002960 AND XFCFBP8418_025330</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.8.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a0191e6b-2355-48f8-956c-7a99c741781e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002960"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025330"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufse_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufsesh_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT160" metaid="_3b26aa1f-34ca-4dad-ad61-a2a6b9b9bdfe" name="1_hexadecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3b26aa1f-34ca-4dad-ad61-a2a6b9b9bdfe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_1hdecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_palmACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AMPTASEPG" metaid="_23f1c327-2a1b-4fcf-90cc-bfefbde6302d" name="R_AMPTASEPG" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015310</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.4.11.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_23f1c327-2a1b-4fcf-90cc-bfefbde6302d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.11.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015310"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_progly_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT161" metaid="c64617ac-311d-4b54-aef2-376374955091" name="1_hexadec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c64617ac-311d-4b54-aef2-376374955091"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_1hdec9eg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hdeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NNDPR" metaid="_83935dc5-8ee9-4dad-8a04-ec426c27cb6f" name="nicotinate_nucleotide_diphosphorylase__carboxylating_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000560</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.4.2.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83935dc5-8ee9-4dad-8a04-ec426c27cb6f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000560"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_quln_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nicrnt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2O2tex" metaid="_4a3c5df9-fcc2-41ee-85d3-57088b40d9d5" name="hydrogen_peroxide_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a3c5df9-fcc2-41ee-85d3-57088b40d9d5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SHK3Dr" metaid="_7406398b-f559-4d85-baa1-6920b86427ee" name="shikimate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006320</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.25</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7406398b-f559-4d85-baa1-6920b86427ee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.25"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006320"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3dhsk_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_skm_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACGK" metaid="_3aeb879a-defd-43b3-9081-935e4c82a433" name="acetylglutamate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025260</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.7.2.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3aeb879a-defd-43b3-9081-935e4c82a433"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.2.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acglu_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acg5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XYLK2" metaid="_9e88a5e9-cd1c-4f71-90df-822c1c0b7c14" name="R_XYLK2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9e88a5e9-cd1c-4f71-90df-822c1c0b7c14"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xylu_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xu5p_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MNt2pp" metaid="_15383220-6b0e-4974-b2b1-6ab3c9986d1b" name="manganese__Mn_2__transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025100</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_15383220-6b0e-4974-b2b1-6ab3c9986d1b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mn2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mn2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACGS" metaid="_134e5c0a-594b-48d7-ac9a-3c801410c386" name="N_acetylglutamate_synthase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025260</p> + <p>SUBSYSTEM: Glutamate_Metabolism</p> + <p>EC_NUMBER: 2.3.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_134e5c0a-594b-48d7-ac9a-3c801410c386"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acglu_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR141x" metaid="c193df77-3f15-4f73-bf4a-295ff19c3f63" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c193df77-3f15-4f73-bf4a-295ff19c3f63"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c7mrseACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdeACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUSAtpp" metaid="_2a1e61c7-0d81-43e9-92ba-81589d52587d" name="Fusidic_acid_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2a1e61c7-0d81-43e9-92ba-81589d52587d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_fusa_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fusa_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HEX1" metaid="b51b0918-0366-46af-9051-2f9d45d9dce0" name="hexokinase__D_glucose_ATP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024690</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 2.7.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b51b0918-0366-46af-9051-2f9d45d9dce0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glc_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA141abcpp" metaid="af4f3f74-fbd6-48a3-b446-daf7dc9619e9" name="phosphatidate_transport_via_ABC_system__n_C14_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#af4f3f74-fbd6-48a3-b446-daf7dc9619e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pa141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa141_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MG2tex" metaid="_010331b8-4e51-4805-adbd-540f39c725d8" name="magnesium__Mg_2__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_010331b8-4e51-4805-adbd-540f39c725d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mg2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mg2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UREAtpp" metaid="f4b7ccf6-301d-4907-9022-b862e6a29f46" name="Urea_transport_via_facilitate_diffusion__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020710</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f4b7ccf6-301d-4907-9022-b862e6a29f46"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_urea_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_urea_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS141pp" metaid="ab3b6156-8ad9-47af-bfcc-e942f8f7392c" name="cardiolipin_synthase__periplasmic__n_C14_1_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ab3b6156-8ad9-47af-bfcc-e942f8f7392c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg141_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_clpn141_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDCPDP" metaid="f70432ed-67fa-4f14-9fa2-7dd667e8358a" name="undecaprenyl_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017720</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.6.1.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f70432ed-67fa-4f14-9fa2-7dd667e8358a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udcpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYtex" metaid="_1663fe58-4112-48e2-8cef-d372f9bc3c20" name="glycine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1663fe58-4112-48e2-8cef-d372f9bc3c20"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gly_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CA2tex" metaid="_6f33b15b-8f42-472c-9e1e-5a417313088f" name="R_CA2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6f33b15b-8f42-472c-9e1e-5a417313088f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ca2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ca2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LACZ" metaid="b6a2eacf-02ef-4757-b073-21d3fe545be6" name="R_LACZ" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007430</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.23</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b6a2eacf-02ef-4757-b073-21d3fe545be6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.23"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007430"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lcts_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gal_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPR" metaid="bed293e1-9ce9-416c-b0e5-fa5e6511d118" name="N_acetyl_g_glutamyl_phosphate_reductase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025250</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.2.1.38</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bed293e1-9ce9-416c-b0e5-fa5e6511d118"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.38"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acg5sa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acg5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Bztex" metaid="_5b62e373-461f-4a8a-92f4-c11ee060f8aa" name="R_Bztex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5b62e373-461f-4a8a-92f4-c11ee060f8aa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_bz_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_bz_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XYLabcpp" metaid="_49d829e8-5877-4754-82ca-e6d254215d5b" name="R_XYLabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_019450</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49d829e8-5877-4754-82ca-e6d254215d5b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019450"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xyl_D_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xyl_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PFK_2" metaid="a62fee40-e915-4b75-9c4c-217c6b7d6451" name="R_PFK_2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026080</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a62fee40-e915-4b75-9c4c-217c6b7d6451"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tag6p_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tagdp_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_ala_L_e" metaid="bd85b437-c114-49ec-9f03-45aab86b866e" name="R_EX_ala_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bd85b437-c114-49ec-9f03-45aab86b866e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_ala_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_A5PISO" metaid="_3dc617f3-cd4a-4062-9e2c-9ecde8ac30b4" name="arabinose_5_phosphate_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003470</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 5.3.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3dc617f3-cd4a-4062-9e2c-9ecde8ac30b4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003470"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ru5p_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ara5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PFK_3" metaid="cf04e16a-842a-43d4-9bcc-7c6ce92d5f34" name="R_PFK_3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026080</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 2.7.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cf04e16a-842a-43d4-9bcc-7c6ce92d5f34"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_s7p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_s17bp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DMPPS" metaid="_0c69784a-fed3-4cee-b9ff-0b780aa4c2e9" name="1_hydroxy_2_methyl_2__E__butenyl_4_diphosphate_reductase__dmpp_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004660</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.17.7.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0c69784a-fed3-4cee-b9ff-0b780aa4c2e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.17.7.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004660"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2mb4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dmpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PTRCabcpp" metaid="e09fa73e-4241-4ee8-aace-6000c6002843" name="putrescine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e09fa73e-4241-4ee8-aace-6000c6002843"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ptrc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ptrc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LIPAabctex" metaid="d0901669-e727-4530-ae87-74cfa07d86b0" name="R_LIPAabctex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003500 AND XFCFBP8418_003510 AND XFCFBP8418_015320 AND XFCFBP8418_015330</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d0901669-e727-4530-ae87-74cfa07d86b0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015320"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipidA_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_kdo2lipidA_XF_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THFAT" metaid="a264d301-0933-454c-a596-0572f42082d6" name="Tetrahydrofolate_aminomethyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a264d301-0933-454c-a596-0572f42082d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_methf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5fthf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LIPOS" metaid="_2abbd216-a9dd-4510-8611-8ff11ef704b3" name="Lipoate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022360</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.8.1.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2abbd216-a9dd-4510-8611-8ff11ef704b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.8.1.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022360"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4fe4s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_octapb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2fe2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dad_5_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_lipopb_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_met_L_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PHEMEabcpp" metaid="_54264b6d-1559-46bf-93b1-caa233327906" name="R_PHEMEabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_005050 AND XFCFBP8418_005060 AND XFCFBP8418_005070 AND XFCFBP8418_005090</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_54264b6d-1559-46bf-93b1-caa233327906"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005090"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005050"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005060"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005070"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pheme_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pheme_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGMH" metaid="_425d6e2c-d506-41be-b57a-4943a04a2ff4" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_beta__1_4_N_acetylglucosaminidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021350</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_425d6e2c-d506-41be-b57a-4943a04a2ff4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acgam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhm_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT180" metaid="_16fc294f-dc7e-4e90-9467-057ba96fdbad" name="1_octadecanoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_16fc294f-dc7e-4e90-9467-057ba96fdbad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_1odecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdcaACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa180_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGPAT181" metaid="ee2e90a2-a5c0-43d3-b432-96199a842fcd" name="1_octadec_7_enoyl_sn_glycerol_3_phosphate_O_acyltransferase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015910</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.51</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ee2e90a2-a5c0-43d3-b432-96199a842fcd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.51"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_octeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1odec11eg3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLNabc" metaid="_83627658-def1-4564-a3c7-31ec67a96de5" name="R_GLNabc" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83627658-def1-4564-a3c7-31ec67a96de5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD181" metaid="_9a7e24d6-b41f-423f-b110-002e27e6c5b9" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a7e24d6-b41f-423f-b110-002e27e6c5b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hcvac11eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c11vaceACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD180" metaid="_056f92d6-acaa-44c3-90a4-c6a31f073669" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_056f92d6-acaa-44c3-90a4-c6a31f073669"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hoctaACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_toctd2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE161abcpp" metaid="_77f7a92e-9927-4d64-b397-a4fcfa8138fe" name="phosphatidylethanolamine_transport_via_ABC_system__n_C16_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_77f7a92e-9927-4d64-b397-a4fcfa8138fe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe161_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GAMtex" metaid="ead08a95-0a7b-4d68-953d-b8dd8a7c3a6a" name="R_GAMtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ead08a95-0a7b-4d68-953d-b8dd8a7c3a6a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gam_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gam_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SERtex" metaid="a8ef9bf8-4075-4ca4-a656-34f3d41452c6" name="L_serine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a8ef9bf8-4075-4ca4-a656-34f3d41452c6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ser_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ser_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHFR" metaid="_1f19b72f-eeda-4abf-920a-07d6e7cffb38" name="dihydrofolate_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.5.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1f19b72f-eeda-4abf-920a-07d6e7cffb38"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021150"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHFS" metaid="_13a5fe0f-2844-417f-a8eb-1abf93b01f20" name="dihydrofolate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000740</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_13a5fe0f-2844-417f-a8eb-1abf93b01f20"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000740"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhpt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FEENTERtex" metaid="eacf7c47-e3ea-4bab-978d-9324629cf480" name="R_FEENTERtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012340</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eacf7c47-e3ea-4bab-978d-9324629cf480"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_enter_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_enter_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UPP3MT" metaid="fa32479a-0e66-4a55-a01e-631b6c2b6a7d" name="uroporphyrinogen_methyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010970</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fa32479a-0e66-4a55-a01e-631b6c2b6a7d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010970"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_uppg3_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dscl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XYLI1" metaid="cd735da3-d07f-42ea-9fa9-3f084052a9d4" name="R_XYLI1" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 5.3.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd735da3-d07f-42ea-9fa9-3f084052a9d4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_xyl_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xylu_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_XYLK" metaid="_98a4c423-a9b2-42de-8f33-8674b923f3d6" name="xylulokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_98a4c423-a9b2-42de-8f33-8674b923f3d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xylu_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_xu5p_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTHRDHpp" metaid="_84d8b4a0-718d-491a-84ac-f7e7523b2fad" name="glutathione_hydralase__periplasmic_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025410</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.4.19.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_84d8b4a0-718d-491a-84ac-f7e7523b2fad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.19.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025410"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthrd_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cgly_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHTNtex" metaid="_5a476698-d09d-4f4c-a26c-fd193b04d412" name="R_CHTNtex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5a476698-d09d-4f4c-a26c-fd193b04d412"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_chtbs_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MSAR" metaid="_98df4efe-41f3-49e7-9a7f-8987cb7ec2e3" name="malonic_semialdehyde_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015390</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 1.1.1.298</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_98df4efe-41f3-49e7-9a7f-8987cb7ec2e3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.298"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_msa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AMPMS2" metaid="_3b4b5613-333a-4920-aa78-cf2eed4f8370" name="4_amino_2_methyl_5_phosphomethylpyrimidine_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_016510 ) OR ( XFCFBP8418_027850 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.99.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3b4b5613-333a-4920-aa78-cf2eed4f8370"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.99.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027850"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_air_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_4ampm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDCP3pp" metaid="_573aff9f-f091-49a1-9e66-52e4879215fc" name="murein_D_D_carboxypeptidase__murein5p5p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_018620 ) OR ( XFCFBP8418_020420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.16.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_573aff9f-f091-49a1-9e66-52e4879215fc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5p4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARD2" metaid="ce7fd466-1fc5-4da8-a40d-5d70368ec9fa" name="R_ARD2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020240</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 1.13.11.54</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ce7fd466-1fc5-4da8-a40d-5d70368ec9fa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.13.11.54"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhmtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4met2obut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_P5CD1p" metaid="_4ad84f32-ce3b-4630-8826-a3020d5140e2" name="1_pyrroline_5_carboxylate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.5.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4ad84f32-ce3b-4630-8826-a3020d5140e2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_1pyr5c_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FOMETR" metaid="_1651cb82-c525-41cb-8f93-9e8bb6281ea6" name="R_FOMETR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001390</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: 2.1.2.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1651cb82-c525-41cb-8f93-9e8bb6281ea6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.2.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5fthf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_methf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Kt2pp" metaid="_8718fecd-eee8-420f-a4be-3aeee5445ae4" name="potassium_transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000330 ) OR ( XFCFBP8418_016360 ) OR ( XFCFBP8418_027690 )</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8718fecd-eee8-420f-a4be-3aeee5445ae4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016360"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027690"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_k_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_k_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDPGDH" metaid="_8e841417-5fac-40c4-a287-87f2a0124da0" name="dTDPglucose_4_6_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026250</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.46</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8e841417-5fac-40c4-a287-87f2a0124da0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.46"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dtdpglu_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtdp4d6dg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYCLTt4ex" metaid="_5ce94b73-8d6a-4acf-815e-aec66fc9a7d0" name="R_GLYCLTt4ex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ce94b73-8d6a-4acf-815e-aec66fc9a7d0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyclt_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyclt_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DXPRIi" metaid="bffea5f3-c1e8-4d36-9200-91ba586e143d" name="1_deoxy_D_xylulose_reductoisomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024850</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.267</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bffea5f3-c1e8-4d36-9200-91ba586e143d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.267"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024850"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2me4p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASNTRS" metaid="_84fdebe3-555f-439e-87c7-5a4f3f5c0d31" name="R_ASNTRS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012160</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.22</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_84fdebe3-555f-439e-87c7-5a4f3f5c0d31"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.22"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012160"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asn_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaasn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_asntrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYTBO3_4pp" metaid="_01dd1124-5e22-4fa3-8cee-1216e6e867e1" name="cytochrome_oxidase_bo3__ubiquinol_8__4_protons___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003690 AND XFCFBP8418_003700 AND XFCFBP8418_003710 AND XFCFBP8418_003720</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 1.10.3.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01dd1124-5e22-4fa3-8cee-1216e6e867e1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.10.3.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003710"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003700"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_c" stoichiometry="0.5"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="4"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR120x" metaid="_635730d1-8a7f-4230-8bd9-0b5daef1f031" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_635730d1-8a7f-4230-8bd9-0b5daef1f031"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tddec2eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ddcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DM_EPS_XF_e" metaid="_5512fd43-90cc-4517-bc0a-5a90ba495950" name="R_DM_EPS_XF_e" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5512fd43-90cc-4517-bc0a-5a90ba495950"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_EPS_XF_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts/> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_dextrin_DEC_e_" metaid="d21c4e58-5421-466c-aa2b-2a2f493b5588" name="R_dextrin_DEC_e_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d21c4e58-5421-466c-aa2b-2a2f493b5588"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dextrin_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_14aglucan_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRD_L" metaid="_7951650e-b0b5-43cb-9716-1a425fd82b23" name="L_threonine_deaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017920</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 4.3.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7951650e-b0b5-43cb-9716-1a425fd82b23"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017920"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thr_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2obut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MAN1PT2r" metaid="f011fe9c-b111-4709-a072-ea9a04772109" name="R_MAN1PT2r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026210</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f011fe9c-b111-4709-a072-ea9a04772109"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_man1p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gdpmann_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE2t2pp" metaid="b471c729-206a-4924-bb5d-60b302adf7d5" name="iron__II__transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025100</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b471c729-206a-4924-bb5d-60b302adf7d5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fe2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DNTPPA" metaid="_4c7cc316-928b-4cca-b6ce-eee5a4d3a1a7" name="R_DNTPPA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023820</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.6.1.67</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4c7cc316-928b-4cca-b6ce-eee5a4d3a1a7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.67"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ahdt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhpmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_VALTRS" metaid="_59bfe82d-057b-4478-a969-8ad19fed6667" name="Valyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015270</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_59bfe82d-057b-4478-a969-8ad19fed6667"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015270"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_val_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaval_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_valtrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_man_e" metaid="c0b99037-9bd3-47d9-b2dd-d8746de1bfb6" name="R_EX_man_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c0b99037-9bd3-47d9-b2dd-d8746de1bfb6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_man_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DGLUISO" metaid="_5e26ce7d-687d-4b74-8e67-070b09d6f6a4" name="5_deoxy_D_glucuronic_acid_isomerase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5e26ce7d-687d-4b74-8e67-070b09d6f6a4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dglca_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dkglc_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACt4pp" metaid="_3fdc7bfe-8c80-414e-98a0-8c6be1009c89" name="Na__Acetate_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020610</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3fdc7bfe-8c80-414e-98a0-8c6be1009c89"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020610"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ac_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD161" metaid="_1629e996-4f3c-4656-9eac-7b497c254231" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1629e996-4f3c-4656-9eac-7b497c254231"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hcpalm9eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_t3c9palmeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDEP1pp" metaid="c3ea7a13-1314-4e42-9915-b527a887f011" name="murein_D_D_endopeptidase__murein4px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018620</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c3ea7a13-1314-4e42-9915-b527a887f011"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4p4p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD160" metaid="_1a5a8a65-35a7-4682-af84-23430d8143a7" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1a5a8a65-35a7-4682-af84-23430d8143a7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hpalmACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tpalm2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLtpp" metaid="_62636e29-a15d-4c1a-b82f-e7d10ec38aed" name="R_CLtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_62636e29-a15d-4c1a-b82f-e7d10ec38aed"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cl_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cl_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_so4_e" metaid="c973e658-83ca-4cdb-884a-5b3695cd90e7" name="R_EX_so4_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c973e658-83ca-4cdb-884a-5b3695cd90e7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_so4_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROabcpp" metaid="d5fa365b-a304-44ee-ae06-93304242dd43" name="L_proline_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007680 AND XFCFBP8418_007690 ) OR ( XFCFBP8418_022120 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d5fa365b-a304-44ee-ae06-93304242dd43"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007690"/> + </fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022120"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR121x" metaid="_2b2701db-a16c-4397-bbb6-2fac326bbbaa" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C12_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2b2701db-a16c-4397-bbb6-2fac326bbbaa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c5ddeceACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cddec5eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACMUMptspp" metaid="f7b75691-42ce-44e0-ade6-9e876276580c" name="R_ACMUMptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f7b75691-42ce-44e0-ade6-9e876276580c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acmum_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acmum6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TTRCYCtpp" metaid="f42c71ab-0b19-4b93-9518-684a533bc0fd" name="Tetracycline_transport_via_TolC_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f42c71ab-0b19-4b93-9518-684a533bc0fd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ttrcyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ttrcyc_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GALt2" metaid="_70336839-2c1b-4ec1-95ff-43ed5dcb735c" name="R_GALt2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018650</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_70336839-2c1b-4ec1-95ff-43ed5dcb735c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_gal_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gal_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BTNt2tex" metaid="_17065047-6a16-4712-85c5-43d495f00b10" name="R_BTNt2tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_17065047-6a16-4712-85c5-43d495f00b10"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_btn_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_btn_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_BTNt2ipp" metaid="_4c4a9986-87b2-4f2c-9a86-7cbb89e5c394" name="R_BTNt2ipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4c4a9986-87b2-4f2c-9a86-7cbb89e5c394"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_btn_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_btn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UAPGR" metaid="_752a8888-0aab-47a8-97bc-e69e63a4222b" name="UDP_N_acetylenolpyruvoylglucosamine_reductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012220</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.3.1.98</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_752a8888-0aab-47a8-97bc-e69e63a4222b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.98"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012220"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_uaccg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uamr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_St" metaid="_734bbc0a-8628-4df7-9cb5-6e444f23dcb6" name="R_St" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_734bbc0a-8628-4df7-9cb5-6e444f23dcb6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_s_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_s_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ICL" metaid="_37a917fc-b955-4189-aed5-76c371c3896e" name="Isocitrate_lyase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Anaplerotic_Reactions</p> + <p>EC_NUMBER: 4.1.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_37a917fc-b955-4189-aed5-76c371c3896e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_icit_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glx_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ATPHs" metaid="_9c2c5156-ceed-4286-a628-a988c5de0fbe" name="R_ATPHs" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.5.4.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9c2c5156-ceed-4286-a628-a988c5de0fbe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_itp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK4" metaid="_8e6b4881-d61c-4ae2-9d38-348c4a9acc87" name="nucleoside_diphosphate_kinase__ATP_dTDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8e6b4881-d61c-4ae2-9d38-348c4a9acc87"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dtdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dttp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACLS" metaid="f6e3c3c3-5844-456c-89fa-a9cdbd61623d" name="acetolactate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017900 AND XFCFBP8418_017910</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.2.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f6e3c3c3-5844-456c-89fa-a9cdbd61623d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_alac_S_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK5" metaid="_8dfdec93-4f40-4c39-9f3c-d96e30952e65" name="nucleoside_diphosphate_kinase__ATP_dGDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8dfdec93-4f40-4c39-9f3c-d96e30952e65"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dgdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dgtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SSALy" metaid="_8f4264f6-9e76-4632-9aec-d02cebd4e009" name="R_SSALy" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 1.2.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8f4264f6-9e76-4632-9aec-d02cebd4e009"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sucsal_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MG2t3_2pp" metaid="_24a2065d-926c-4daf-a5a3-c451a3bdd574" name="R_MG2t3_2pp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24a2065d-926c-4daf-a5a3-c451a3bdd574"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mg2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mg2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGMt2pp" metaid="_499cd0da-ac38-445f-be2c-0fd37860bb0d" name="GlcNAc_anhMurNAc_transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015550</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_499cd0da-ac38-445f-be2c-0fd37860bb0d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_anhgm_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK2" metaid="fb8b0ac5-9d06-4124-8cdf-31744363fa53" name="nucleoside_diphosphate_kinase__ATP_UDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fb8b0ac5-9d06-4124-8cdf-31744363fa53"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGt2rpp" metaid="ccccc1d4-b6f1-49bf-85f7-6f7c444a7c54" name="R_ARGt2rpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020210</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ccccc1d4-b6f1-49bf-85f7-6f7c444a7c54"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_arg_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK3" metaid="_6937dd0f-e67b-4fa0-9e97-a7fa4f63c3a6" name="nucleoside_diphosphate_kinase__ATP_CDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6937dd0f-e67b-4fa0-9e97-a7fa4f63c3a6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHORS" metaid="_6a897d1f-49f8-4da7-bd88-a7f00cd4ff26" name="chorismate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003900</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.2.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6a897d1f-49f8-4da7-bd88-a7f00cd4ff26"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003900"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3psme_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_chor_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THYMt3pp" metaid="_0f387fca-8fc8-4707-9393-ce4bf257835e" name="R_THYMt3pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0f387fca-8fc8-4707-9393-ce4bf257835e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thym_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_thym_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK1" metaid="_5ff4275e-3068-414e-9825-963bd0aaaace" name="nucleoside_diphosphate_kinase__ATP_GDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ff4275e-3068-414e-9825-963bd0aaaace"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHORM" metaid="c9ef9723-b4f3-45c4-b434-b1d82a17f661" name="chorismate_mutase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021090</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 5.4.99.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c9ef9723-b4f3-45c4-b434-b1d82a17f661"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.99.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021090"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chor_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pphn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SLNTtex" metaid="_59bfd58d-db80-4046-87fa-07e1fe20a2e9" name="R_SLNTtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_59bfd58d-db80-4046-87fa-07e1fe20a2e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_slnt_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_slnt_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_lys_L_e" metaid="_34b3bd5b-8073-429c-8023-21cc0a758eb2" name="R_EX_lys_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34b3bd5b-8073-429c-8023-21cc0a758eb2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_lys_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK8" metaid="df515a47-fefa-4505-b7b3-5dd650efff0a" name="nucleoside_diphosphate_kinase__ATP_dADP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#df515a47-fefa-4505-b7b3-5dd650efff0a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dadp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_datp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK6" metaid="_1cf12621-15ab-45dc-8978-5853bee37832" name="nucleoside_diphosphate_kinase__ATP_dUDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1cf12621-15ab-45dc-8978-5853bee37832"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dudp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dutp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NDPK7" metaid="_6ae55dbd-0ec3-48a3-87e5-aeab9240820a" name="nucleoside_diphosphate_kinase__ATP_dCDP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007250 ) OR ( XFCFBP8418_026070 )</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6ae55dbd-0ec3-48a3-87e5-aeab9240820a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007250"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dcdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD141" metaid="_90032cc8-9ce7-4a28-933b-85c43b405895" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_90032cc8-9ce7-4a28-933b-85c43b405895"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hcmrs7eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_t3c7mrseACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ETFDH" metaid="fa3dc8e0-7469-4e03-9a23-76f958d313c6" name="Electron_transferring_flavoprotein_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022160 AND XFCFBP8418_026260 AND XFCFBP8418_026270</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 1.5.5.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fa3dc8e0-7469-4e03-9a23-76f958d313c6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.5.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026260"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026270"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_etfrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_etfox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HAD140" metaid="ff0ba4ff-1b01-455b-b108-acf6ac66253b" name="3_hydroxyacyl__acyl_carrier_protein__dehydratase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006750 ) OR ( XFCFBP8418_024890 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.59</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ff0ba4ff-1b01-455b-b108-acf6ac66253b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.59"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024890"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006750"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hmrsACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tmrs2eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDH2" metaid="e1d8bd90-d0d4-467b-8a79-3b5c9ac34ffd" name="Malate_dehydrogenase__ubiquinone_8_as_acceptor_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009850</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 1.1.5.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e1d8bd90-d0d4-467b-8a79-3b5c9ac34ffd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.5.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009850"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mal_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR181tipp" metaid="_23a8f60b-f236-41c5-930b-37dcce5a346b" name="R_12DGR181tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_23a8f60b-f236-41c5-930b-37dcce5a346b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr181_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr181_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD9" metaid="d8eb237f-c639-4696-b1d4-d9ed1d3f2ce7" name="5__nucleotidase__GMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d8eb237f-c639-4696-b1d4-d9ed1d3f2ce7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gsn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PMPK" metaid="_748158b4-58e6-4058-b881-81fe9214c5f9" name="phosphomethylpyrimidine_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006340</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.4.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_748158b4-58e6-4058-b881-81fe9214c5f9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4ampm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2mahmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD5" metaid="b12d5780-c02d-4806-a0aa-ae388924f32e" name="5__nucleotidase__dTMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b12d5780-c02d-4806-a0aa-ae388924f32e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_thymd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTHPe" metaid="_07676509-b6dc-4312-b61e-6d00cf2d7843" name="glutathione_peroxidase__e_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_016490 ) OR ( XFCFBP8418_027830 )</p> + <p>SUBSYSTEM: Superoxide_radicals_degradation</p> + <p>EC_NUMBER: 1.11.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_07676509-b6dc-4312-b61e-6d00cf2d7843"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.11.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027830"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016490"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_e" stoichiometry="2"/> + <speciesReference constant="true" species="M_h2o2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthox_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_e" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD6" metaid="b2e4836e-8385-49c1-bce5-d7b29f6708a9" name="5__nucleotidase__dAMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b2e4836e-8385-49c1-bce5-d7b29f6708a9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_damp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dad_2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD7" metaid="ef706ea1-e25a-4328-8f3e-3adff8714efc" name="5__nucleotidase__AMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ef706ea1-e25a-4328-8f3e-3adff8714efc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD8" metaid="_8a0f2edf-f196-43d9-bafe-75bb488fbe30" name="5__nucleotidase__dGMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8a0f2edf-f196-43d9-bafe-75bb488fbe30"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dgmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dgsn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD1" metaid="_2af412c4-0b5e-4ea6-a36d-04b8d824a7c2" name="5__nucleotidase__dUMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2af412c4-0b5e-4ea6-a36d-04b8d824a7c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dump_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_duri_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD2" metaid="_44c95b00-242e-492b-b9ec-734ffe6b1499" name="5__nucleotidase__UMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_44c95b00-242e-492b-b9ec-734ffe6b1499"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_uri_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD3" metaid="_3fa0db80-f0dd-4110-b165-68ae0a69d35a" name="5__nucleotidase__dCMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3fa0db80-f0dd-4110-b165-68ae0a69d35a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dcyt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NTD4" metaid="ea65d95f-0616-4577-92a3-5925cbdc1c70" name="5__nucleotidase__CMP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010630</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.1.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ea65d95f-0616-4577-92a3-5925cbdc1c70"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cytd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PHEMEtiex" metaid="bd3417a6-6b7f-4ceb-bcaa-c40abddd67ad" name="R_PHEMEtiex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bd3417a6-6b7f-4ceb-bcaa-c40abddd67ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pheme_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pheme_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DBTSr" metaid="b5bd87e7-9dc6-46dd-8b15-72d3bba6ccee" name="dethiobiotin_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005250</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.3.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b5bd87e7-9dc6-46dd-8b15-72d3bba6ccee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.3.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dann_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dtbt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE3Gabcpp" metaid="_0a9e571a-729f-4b63-a847-32f19c7e41dd" name="R_FE3Gabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012840</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0a9e571a-729f-4b63-a847-32f19c7e41dd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe3_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_gtp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe3_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLCGSD_c" metaid="c37202c6-f0f8-4fd7-aeaf-7049b792bf93" name="R_GLCGSD_c" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c37202c6-f0f8-4fd7-aeaf-7049b792bf93"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="11"/> + <speciesReference constant="true" species="M_14aglucan_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_c" stoichiometry="12"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2SO" metaid="db507ffb-2fd9-443e-9dfc-62c2a6653f5f" name="R_H2SO" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#db507ffb-2fd9-443e-9dfc-62c2a6653f5f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_so4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TMDS" metaid="_00cd6cef-032d-4134-8100-858239e9af41" name="thymidylate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021160</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.1.1.45</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00cd6cef-032d-4134-8100-858239e9af41"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.45"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021160"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dtmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhf_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PDX5PS" metaid="_8bf4a65b-e5cb-4699-a6f4-fa2a050deccc" name="Pyridoxine_5__phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010890 AND XFCFBP8418_014620</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8bf4a65b-e5cb-4699-a6f4-fa2a050deccc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014620"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010890"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_phthr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dxyl5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pdx5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSERTr" metaid="_880ff223-84ce-40fd-b6b5-464a0a327b33" name="phosphoserine_transaminase_reversible" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021100</p> + <p>SUBSYSTEM: Glycine_and_Serine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.52</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_880ff223-84ce-40fd-b6b5-464a0a327b33"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.52"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3php_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pser_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SPMS" metaid="_89460829-87c3-46b3-8c6c-595f9fe28999" name="spermidine_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015370</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.5.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_89460829-87c3-46b3-8c6c-595f9fe28999"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ametam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ptrc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5mta_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_spmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGN" metaid="_2a015dd2-0581-48c4-9594-0a49331c188c" name="arginase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 3.5.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2a015dd2-0581-48c4-9594-0a49331c188c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_orn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_urea_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CTPS2" metaid="_13da69ab-0d1c-4f42-bee4-2a1d39160097" name="CTP_synthase__glutamine_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022240</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 6.3.4.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_13da69ab-0d1c-4f42-bee4-2a1d39160097"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ATPPRTr" metaid="_0c686895-bb92-4259-b366-6864383857b5" name="ATP_phosphoribosyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020330</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 2.4.2.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0c686895-bb92-4259-b366-6864383857b5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020330"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prbatp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDCP5pp" metaid="ffdcc002-2deb-49f2-9bb9-e9e6a9bfcd36" name="murein_D_D_carboxypeptidase__murein5p3p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_018620 ) OR ( XFCFBP8418_020420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.16.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ffdcc002-2deb-49f2-9bb9-e9e6a9bfcd36"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PDX5PO" metaid="_803d8994-51db-41c0-8563-f8707cce7608" name="pyridoxine_5__phosphate_oxidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.4.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_803d8994-51db-41c0-8563-f8707cce7608"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004150"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pdx5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pydx5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROD2" metaid="b5d69dbf-275a-4438-95e0-a0da3d4b00f3" name="Proline_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 1.5.99.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b5d69dbf-275a-4438-95e0-a0da3d4b00f3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.99.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pro_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_1pyr5c_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_APCS" metaid="f189ca07-aa4c-49ba-a22a-686d1706b5f5" name="R_APCS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015370</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 2.5.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f189ca07-aa4c-49ba-a22a-686d1706b5f5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ametam_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_15dap_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5mta_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_na15dap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MTHFD" metaid="db141efd-85a3-4f46-b622-01f77e5817da" name="methylenetetrahydrofolate_dehydrogenase__NADP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004790</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: 1.5.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#db141efd-85a3-4f46-b622-01f77e5817da"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.5.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mlthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_methf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MTHFC" metaid="_5fa06a26-166c-4fa3-93a0-1d5698a8b5b3" name="methenyltetrahydrofolate_cyclohydrolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004790</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: 3.5.4.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5fa06a26-166c-4fa3-93a0-1d5698a8b5b3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004790"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_methf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OHPBAT" metaid="_0b00da5e-5263-4a0f-8d84-3be9ce2e27c3" name="O_Phospho_4_hydroxy_L_threonine_2_oxoglutarate_aminotransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021100</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.6.1.52</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b00da5e-5263-4a0f-8d84-3be9ce2e27c3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.52"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ohpb_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_phthr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP141pp" metaid="ae795ce0-e733-4557-8d0f-fdd8bc63b4e8" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ae795ce0-e733-4557-8d0f-fdd8bc63b4e8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp141_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg141_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AP5AH" metaid="_83169f0e-2340-4479-9035-d6c6f4bbc140" name="Ap5A_hydrolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019500</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.61</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_83169f0e-2340-4479-9035-d6c6f4bbc140"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.61"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019500"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ap5a_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM4PH" metaid="_19997018-7609-4bb6-84a0-d013de71994b" name="N_Acetyl_D_glucosamine_anhydrous_N_Acetylmuramyl_tetrapeptide_beta__1_4_N_acetylglucosaminidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021350</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_19997018-7609-4bb6-84a0-d013de71994b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_anhgm4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhm4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acgam_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TREptspp" metaid="_533ae11a-b048-4dc4-99d8-e11df0190fc8" name="R_TREptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND No_Assignment2 AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_533ae11a-b048-4dc4-99d8-e11df0190fc8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment2"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tre_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tre6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTHOr" metaid="_5200a072-a335-4b28-bb9d-b0006470ef4d" name="glutathione_oxidoreductase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002170</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.8.1.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5200a072-a335-4b28-bb9d-b0006470ef4d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.1.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002170"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACGAMT" metaid="be79aead-a49a-4c67-903c-874f23419c47" name="R_ACGAMT" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004820</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#be79aead-a49a-4c67-903c-874f23419c47"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_udcpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_uacgam_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ump_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_unaga_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR100x" metaid="f47bdb4a-719a-4aee-8dfa-7596f47b6ed8" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C10_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f47bdb4a-719a-4aee-8dfa-7596f47b6ed8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tdec2eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ZN2tex" metaid="ab2f5868-2024-44b9-887b-ccf667eb087f" name="R_ZN2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ab2f5868-2024-44b9-887b-ccf667eb087f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_zn2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_zn2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NO3tex" metaid="e1734774-24bd-4670-b857-68c7d7be46ae" name="nitrate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e1734774-24bd-4670-b857-68c7d7be46ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_no3_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_no3_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ANHMK" metaid="_9ad62f87-a3a2-479a-8241-0e7f5a57ad1a" name="1_6_anhydrous_N_Acetylmuramate_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015560</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: 2.7.1.170</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ad62f87-a3a2-479a-8241-0e7f5a57ad1a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.170"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015560"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhm_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acmum6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MNabc_1" metaid="_04da6e87-f3dc-4788-93c3-c5599974807b" name="R_MNabc_1" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022890</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 3.6.3.35</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_04da6e87-f3dc-4788-93c3-c5599974807b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.35"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mn2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mn2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DCTPD2" metaid="_24b63732-de2d-45f4-a436-4d69eb4e5058" name="dCTP_deaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011560</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.5.4.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24b63732-de2d-45f4-a436-4d69eb4e5058"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.4.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011560"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ctp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SPMDtex" metaid="_9e27748f-20df-4e06-8900-612653c342f6" name="spermidine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009840</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: 3.6.3.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9e27748f-20df-4e06-8900-612653c342f6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_spmd_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_spmd_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE3tex" metaid="_1957b4ed-7e5b-4ac0-bd1f-6b1c41ba35bc" name="iron__III__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1957b4ed-7e5b-4ac0-bd1f-6b1c41ba35bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fe3_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fe3_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACONTa" metaid="_67a44e2f-c272-4145-a365-5d7992ea2a59" name="aconitase__half_reaction_A__Citrate_hydro_lyase_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_022570 ) OR ( XFCFBP8418_025910 ) OR ( XFCFBP8418_025940 )</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 4.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_67a44e2f-c272-4145-a365-5d7992ea2a59"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022570"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025940"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cit_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acon_C_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACONTb" metaid="ddd85e75-afbd-47f2-9d5f-910734316be2" name="aconitase__half_reaction_B__Isocitrate_hydro_lyase_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_022570 ) OR ( XFCFBP8418_025910 ) OR ( XFCFBP8418_025940 )</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 4.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ddd85e75-afbd-47f2-9d5f-910734316be2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022570"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025940"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acon_C_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_icit_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUt2rpp" metaid="_09da3e46-6d4a-456a-b166-a0a0494d351b" name="R_GLUt2rpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000650</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_09da3e46-6d4a-456a-b166-a0a0494d351b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR160" metaid="c697ce5f-c134-46b1-b633-71634fdf17b9" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c697ce5f-c134-46b1-b633-71634fdf17b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3opalmACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hpalmACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_pro_L_e" metaid="_836b4621-e7d2-45ac-9d3a-a6be05a162a6" name="R_EX_pro_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_836b4621-e7d2-45ac-9d3a-a6be05a162a6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_pro_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR161" metaid="eba2b6d8-8b0f-4470-8be0-509695ddd781" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eba2b6d8-8b0f-4470-8be0-509695ddd781"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3ocpalm9eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hcpalm9eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_K2L4Aabctex" metaid="_8f58e924-4608-434e-9a13-13ca1c09b76f" name="R_K2L4Aabctex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003500 AND XFCFBP8418_003510 AND XFCFBP8418_015320 AND XFCFBP8418_015330</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8f58e924-4608-434e-9a13-13ca1c09b76f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003510"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015330"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015320"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipid4_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipid4_XF_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TRDR" metaid="_84967ad6-6731-4f9e-bf52-1e7d8087edc7" name="thioredoxin_reductase__NADPH_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003190 AND XFCFBP8418_013260</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 1.8.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_84967ad6-6731-4f9e-bf52-1e7d8087edc7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003190"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013260"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trdrd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CU1Opp" metaid="_2df0f7fa-a7cb-4f3e-a134-2a79c561a3be" name="Cuprous_Oxidase__Cu_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015250</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: 1.16.3.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2df0f7fa-a7cb-4f3e-a134-2a79c561a3be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.16.3.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cu_p" stoichiometry="4"/> + <speciesReference constant="true" species="M_o2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cu2_p" stoichiometry="4"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT161" metaid="_8743f99e-7c52-4a20-b3f9-ebd7f69a6f96" name="R_G3PAT161" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8743f99e-7c52-4a20-b3f9-ebd7f69a6f96"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1hdec9eg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPKr" metaid="_296dbd06-b104-4ade-8554-7fb5947ef74f" name="polyphosphate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012370</p> + <p>SUBSYSTEM: Oxidative_Phosphorylation</p> + <p>EC_NUMBER: 2.7.4.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_296dbd06-b104-4ade-8554-7fb5947ef74f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012370"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CDPMEK" metaid="_3d262e90-fef9-4e40-9171-7fa2af701e00" name="4__cytidine_5__diphospho__2_C_methyl_D_erythritol_kinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012890</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.148</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d262e90-fef9-4e40-9171-7fa2af701e00"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.148"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4c2me_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2p4c2me_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT160" metaid="_0d791462-eb70-44f7-9e4d-3b6f0b5916bc" name="R_G3PAT160" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0d791462-eb70-44f7-9e4d-3b6f0b5916bc"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_palmACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1hdecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR40x" metaid="bd1217d3-2f78-4182-a09d-af56c64865f2" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C4_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bd1217d3-2f78-4182-a09d-af56c64865f2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_but2eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_butACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALR2" metaid="_1e88fcb4-f43e-4d83-a5ff-c5975edf1664" name="aldose_reductase__methylglyoxal_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_008650</p> + <p>SUBSYSTEM: Methylglyoxal_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1e88fcb4-f43e-4d83-a5ff-c5975edf1664"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_008650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mthgxl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acetol_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ThDPAT" metaid="_80a4c7df-ab7a-4bca-9b2f-19945f08db4e" name="R_ThDPAT" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_80a4c7df-ab7a-4bca-9b2f-19945f08db4e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thmpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_athtp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IGPS" metaid="_1bc1f9b0-e8fa-4073-8597-eb6a18fa2e58" name="indole_3_glycerol_phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026720</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 4.1.1.48</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1bc1f9b0-e8fa-4073-8597-eb6a18fa2e58"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.48"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2cpr5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ig3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3HPPtex" metaid="_29dee993-41e5-4ed3-aa67-0e67e024cdc7" name="3_hydroxypropionate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_29dee993-41e5-4ed3-aa67-0e67e024cdc7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hpp_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3hpp_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INDOLEt2pp" metaid="f09cdaf4-7b4c-4c97-b788-b1022184b24c" name="R_INDOLEt2pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_000160 AND XFCFBP8418_000170 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000160 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_001680 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_000170 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_001690 AND XFCFBP8418_012340 ) OR ( XFCFBP8418_001680 AND XFCFBP8418_012340 AND XFCFBP8418_027900 ) OR ( XFCFBP8418_001690 AND XFCFBP8418_012340 AND XFCFBP8418_027910 ) OR ( XFCFBP8418_012340 AND XFCFBP8418_027900 AND XFCFBP8418_027910 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f09cdaf4-7b4c-4c97-b788-b1022184b24c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000160"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000170"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001680"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027900"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001690"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012340"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_indole_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_indole_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALAALAabcpp" metaid="_1463c0d7-56a1-436e-9e50-55a7b363bff0" name="D_alanyl_D_alanine__DalaDala__transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1463c0d7-56a1-436e-9e50-55a7b363bff0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_alaala_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_alaala_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S4FE4SR" metaid="a39e83c4-8130-4285-a95c-5019026fba5d" name="R_S4FE4SR" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a39e83c4-8130-4285-a95c-5019026fba5d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fadh2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_2fe2s2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_sufbcd_4fe4s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SLCYSS" metaid="f39f7141-fb0d-4e12-9e6b-855ed0a8b96a" name="R_SLCYSS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006490 ) OR ( XFCFBP8418_010980 )</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 2.5.1.47</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f39f7141-fb0d-4e12-9e6b-855ed0a8b96a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.47"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010980"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006490"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tsul_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acser_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_scys_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2Stex" metaid="_9a4a4643-63be-43f7-8b3a-6c7f06817bc9" name="Hydrogen_sulfide_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a4a4643-63be-43f7-8b3a-6c7f06817bc9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2s_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2s_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_S4FE4ST" metaid="_2a1716f0-15c5-4cc4-99a2-b839a2e051ed" name="R_S4FE4ST" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002930 AND XFCFBP8418_002940 AND XFCFBP8418_002950 AND XFCFBP8418_012150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2a1716f0-15c5-4cc4-99a2-b839a2e051ed"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002950"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012150"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002930"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_sufbcd_4fe4s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4fe4s_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_sufbcd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TREtex" metaid="bbe09276-0f1b-463f-a7f8-af3a0e0888f4" name="trehalose_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bbe09276-0f1b-463f-a7f8-af3a0e0888f4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tre_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_tre_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_ca2_e" metaid="_5cb9433a-1034-41dc-9665-2169a037d64e" name="R_EX_ca2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5cb9433a-1034-41dc-9665-2169a037d64e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_ca2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EDTXS3XF" metaid="_0d0e9caf-e261-478c-aa35-a28ea1bbabe7" name="R_EDTXS3XF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004060 ) OR ( XFCFBP8418_015020 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.-</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0d0e9caf-e261-478c-aa35-a28ea1bbabe7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.-"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004060"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015020"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hddecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipid4HL_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_kdo2lipidA_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA161abcpp" metaid="c05fbc20-f6ee-4d43-a4da-d019b0a17c45" name="phosphatidate_transport_via_ABC_system__n_C16_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c05fbc20-f6ee-4d43-a4da-d019b0a17c45"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa161_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR140" metaid="_3f7cf43a-bec4-4e63-bcc4-6321a02571c1" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3f7cf43a-bec4-4e63-bcc4-6321a02571c1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3omrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hmrsACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_12DGR180tipp" metaid="bdba66cf-d220-480a-884e-50c672f09150" name="R_12DGR180tipp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bdba66cf-d220-480a-884e-50c672f09150"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr180_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_12dgr180_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GMPS2" metaid="_8fe6e735-7903-4534-8398-e8ee0a6624c6" name="GMP_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004770</p> + <p>SUBSYSTEM: Purine_biosynthesis</p> + <p>EC_NUMBER: 6.3.5.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8fe6e735-7903-4534-8398-e8ee0a6624c6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.5.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004770"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_xmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_gmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR141" metaid="_49728e10-3c78-43f6-a132-ea7cc9eb9fbb" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49728e10-3c78-43f6-a132-ea7cc9eb9fbb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3ocmrs7eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hcmrs7eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL180t2pp" metaid="eb1f72a2-ac74-4a5c-b7bc-9b29c71d87f6" name="fatty_acid_CoA_ligase__octadecanoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#eb1f72a2-ac74-4a5c-b7bc-9b29c71d87f6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdca_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_stcoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PYAM5POr" metaid="_6a4ff0cf-2525-49ac-8234-77e07699f8b0" name="pyridoxamine_5__phosphate_oxidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004150</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.4.3.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6a4ff0cf-2525-49ac-8234-77e07699f8b0"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.3.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004150"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyam5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pydx5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUabcpp" metaid="_8e7235ba-0cae-487d-9a6c-5324972d6fdf" name="L_glutamate_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007600</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8e7235ba-0cae-487d-9a6c-5324972d6fdf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007600"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT140" metaid="_28833569-f07f-40e5-b678-fa48db25b28a" name="R_G3PAT140" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28833569-f07f-40e5-b678-fa48db25b28a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_myrsACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1tdecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SO3tex" metaid="_18616028-27c7-4c6b-af75-6cc5f4b1bf92" name="R_SO3tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_18616028-27c7-4c6b-af75-6cc5f4b1bf92"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_so3_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_so3_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT141" metaid="_0ecee537-dc8c-47f3-83c2-37fde71aca86" name="R_G3PAT141" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0ecee537-dc8c-47f3-83c2-37fde71aca86"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_tdeACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1tdec7eg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_zn2_e" metaid="_4159c7ec-d404-4f29-8f77-4aeb035a94d3" name="R_EX_zn2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4159c7ec-d404-4f29-8f77-4aeb035a94d3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_zn2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ICITt_kt" metaid="f31ef274-0ba9-42bf-8ec3-36b15d0f53ae" name="R_ICITt_kt" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025570</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f31ef274-0ba9-42bf-8ec3-36b15d0f53ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_icit_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_icit_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS161pp" metaid="_330389ae-5902-43a7-bbb8-8539ca5d20f6" name="cardiolipin_synthase__periplasmic__n_C16_1_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_330389ae-5902-43a7-bbb8-8539ca5d20f6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg161_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_clpn161_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2Otpp" metaid="_428d2359-fbda-446b-968a-347363e63c46" name="H2O_transport_via_diffusion__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_428d2359-fbda-446b-968a-347363e63c46"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYOX3" metaid="f55a5957-c961-408b-8b81-cefe28454487" name="R_GLYOX3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023680</p> + <p>SUBSYSTEM: Methylglyoxal_Metabolism</p> + <p>EC_NUMBER: 4.2.1.130</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f55a5957-c961-408b-8b81-cefe28454487"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.130"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_mthgxl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_lac_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_mg2_e" metaid="_7aad2af7-c5ef-42cf-b7dc-a845bf767d19" name="R_EX_mg2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7aad2af7-c5ef-42cf-b7dc-a845bf767d19"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_mg2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHGLYH" metaid="_9db97772-9661-4bce-9fe2-80cb8f3ee38f" name="R_DHGLYH" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9db97772-9661-4bce-9fe2-80cb8f3ee38f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhgly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glx_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DB4PS" metaid="_421cf543-364a-4062-846b-f8f45f1a69a1" name="3_4_Dihydroxy_2_butanone_4_phosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009770</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.99.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_421cf543-364a-4062-846b-f8f45f1a69a1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.99.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009770"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ru5p_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_db4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDCP2App" metaid="_80658f59-ff34-4f09-b691-7484e8d693a4" name="murein_L_D_carboxypeptidase__murein5p5p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_80658f59-ff34-4f09-b691-7484e8d693a4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5p5p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein5p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_alaala_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACACT1r" metaid="_87eb8bca-e417-4d10-8773-fb67586b7b3c" name="acetyl_CoA_C_acetyltransferase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_87eb8bca-e417-4d10-8773-fb67586b7b3c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_aacoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP181pp" metaid="_27e14e08-7e2a-4bd7-b2c1-f25770fdc7b2" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_27e14e08-7e2a-4bd7-b2c1-f25770fdc7b2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp181_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg181_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FRUpts2" metaid="_49070d4c-f0be-4db8-8494-ed3d451df624" name="R_FRUpts2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_49070d4c-f0be-4db8-8494-ed3d451df624"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fru_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACHBS" metaid="_789c92ae-6b7b-4d83-ad40-4db45c2628ad" name="2_aceto_2_hydroxybutanoate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017900 AND XFCFBP8418_017910</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.2.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_789c92ae-6b7b-4d83-ad40-4db45c2628ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017910"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2obut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ahbut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CHTNABCt" metaid="_66ab3ddb-b37e-4479-a284-4e4856416781" name="R_CHTNABCt" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_66ab3ddb-b37e-4479-a284-4e4856416781"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_chtbs_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_chtbs_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA120abcpp" metaid="e5726ea6-018f-4fa7-a709-2a4af8810ec5" name="phosphatidate_transport_via_ABC_system__n_C12_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e5726ea6-018f-4fa7-a709-2a4af8810ec5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa120_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa120_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HISDr" metaid="_2d6e0f6b-14f9-4471-895d-0846b763cb9f" name="histidase_r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 4.3.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2d6e0f6b-14f9-4471-895d-0846b763cb9f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_his_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_urcan_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM3Pt2pp" metaid="_18440f86-dad4-41f8-8cfb-e015c27965aa" name="GlcNAc_anhMurNAc_tripeptide_transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015550</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_18440f86-dad4-41f8-8cfb-e015c27965aa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_anhgm3p_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ANPRT" metaid="e154ca2e-3890-47e1-aea1-87fc24c96233" name="anthranilate_phosphoribosyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026730</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.4.2.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e154ca2e-3890-47e1-aea1-87fc24c96233"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026730"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_anth_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pran_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AHSERL3" metaid="_28ebcd3c-2de8-4221-9952-56d90ca3e156" name="R_cysteine_synthase__Selenide_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_006490 ) OR ( XFCFBP8418_010590 ) OR ( XFCFBP8418_010980 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_28ebcd3c-2de8-4221-9952-56d90ca3e156"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010590"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010980"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006490"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acser_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_seln_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_selcys_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AHSERL2" metaid="_1e0210a1-ddb2-4251-99e6-242396b57ff1" name="R_AHSERL2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010590</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 2.5.1.49</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1e0210a1-ddb2-4251-99e6-242396b57ff1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.49"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_achms_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2s_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hcys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G2PP" metaid="_889da4e8-8566-4f3f-acb8-97291ae9294b" name="glycerol_2_phosphate_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005240</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 3.1.3.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_889da4e8-8566-4f3f-acb8-97291ae9294b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/ 3.1.3.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc2p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PHEMEAS" metaid="_4dff57e7-ed27-4653-9ce4-88dfebdec7d8" name="putative_hemeA_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003990</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4dff57e7-ed27-4653-9ce4-88dfebdec7d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003990"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hemeO_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hemeA_1_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_fe2_e" metaid="ff3238a4-c949-47c0-91fd-b6300ab90ff7" name="R_EX_fe2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ff3238a4-c949-47c0-91fd-b6300ab90ff7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_fe2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR120" metaid="_73a75cd3-61a7-4f57-9e50-0270d6928984" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_73a75cd3-61a7-4f57-9e50-0270d6928984"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3oddecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hddecACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FTHFD" metaid="_97dbb6ec-f60d-41d3-9872-a30786df7ee9" name="formyltetrahydrofolate_deformylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017820</p> + <p>SUBSYSTEM: Folate_Metabolism</p> + <p>EC_NUMBER: 3.5.1.10</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97dbb6ec-f60d-41d3-9872-a30786df7ee9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.10"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_10fthf_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thf_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR121" metaid="_94014400-7692-4e52-a4cd-e4a5ede8c869" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C12_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94014400-7692-4e52-a4cd-e4a5ede8c869"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3ocddec5eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hcddec5eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SUCCt3pp" metaid="_11a2ab15-ec29-4b32-a8f2-63b22bb92ef7" name="R_SUCCt3pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_11a2ab15-ec29-4b32-a8f2-63b22bb92ef7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_succ_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_succ_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA141" metaid="_8f1551cd-700d-4fa8-a5ac-06562bd1596f" name="Phosphatidylglycerol_synthase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8f1551cd-700d-4fa8-a5ac-06562bd1596f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdtdec7eg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HIStex" metaid="d880ccde-0889-4968-9fb8-f43fb3d638f2" name="L_histidine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d880ccde-0889-4968-9fb8-f43fb3d638f2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_his_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_his_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA140" metaid="_0c38e552-5295-476b-b889-e73a205647b9" name="Phosphatidylglycerol_synthase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0c38e552-5295-476b-b889-e73a205647b9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdtdecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LPSS1XF" metaid="faf631a7-983a-4d80-8094-afc7f95450db" name="R_LPSS1XF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#faf631a7-983a-4d80-8094-afc7f95450db"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gdpmann_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_udpxyl_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_kdo2lipidA_XF_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_udpgalur_c" stoichiometry="53"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="15"/> + <speciesReference constant="true" species="M_dtdprmn_c" stoichiometry="19"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_core_kdo2lip6_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dtdp_c" stoichiometry="19"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="4"/> + <speciesReference constant="true" species="M_udp_c" stoichiometry="70"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_INSDH" metaid="f55db845-14e8-4232-a52f-d39c0aa4daa4" name="2_keto_myo_inositol_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.2.1.44</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f55db845-14e8-4232-a52f-d39c0aa4daa4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.44"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ins_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dkdepiins_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAL181t2pp" metaid="_4e19d812-c78a-431b-a118-69204652bfc4" name="fatty_acid_CoA_ligase__octadecenoate_transport_via_vectoral_Co_A_coupling_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025950</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.2.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4e19d812-c78a-431b-a118-69204652bfc4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ocdcea_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_odecoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPTHpp" metaid="cc7759f9-512e-4135-9b99-a3c70d664f0c" name="R_PPTHpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006010</p> + <p>SUBSYSTEM: Nucleotides_degradation</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cc7759f9-512e-4135-9b99-a3c70d664f0c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006010"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ppt_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RBFSb" metaid="e3ead820-9549-47da-8f2e-b7b2d114056b" name="riboflavin_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009760</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e3ead820-9549-47da-8f2e-b7b2d114056b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009760"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dmlz_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ribflv_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4r5au_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_ni2_e" metaid="e41c8663-235b-4f95-b953-a39c06455791" name="R_EX_ni2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e41c8663-235b-4f95-b953-a39c06455791"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_ni2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MECDPS" metaid="_7bbec3fd-1e0b-4758-95bf-4186e227c611" name="2_C_methyl_D_erythritol_2_4_cyclodiphosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022190</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.6.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7bbec3fd-1e0b-4758-95bf-4186e227c611"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.6.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022190"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2p4c2me_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2mecdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OXOGAH" metaid="_148cbb5c-87ce-48fd-80c2-b6eb893a5bc2" name="R_OXOGAH" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005030</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: 3.5.1.111</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_148cbb5c-87ce-48fd-80c2-b6eb893a5bc2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.1.111"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005030"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ogm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_6PDDGLUCA" metaid="aabd4ea8-d600-4f18-98d7-23aadf0eab7f" name="6_phospho_5_dehydro_2_deoxy_D_gluconate_aldolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.1.2.29</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#aabd4ea8-d600-4f18-98d7-23aadf0eab7f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.29"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_6pddgluc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_msa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLPNS181pp" metaid="_5aebb49f-ce41-48b5-abac-a2d8f4ec0c5d" name="cardiolipin_synthase__periplasmic__n_C18_1_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_023020</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5aebb49f-ce41-48b5-abac-a2d8f4ec0c5d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_023020"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pg181_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_clpn181_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HMBS" metaid="_464f1d0a-4d4a-4d95-95d5-4d7134b70ca8" name="hydroxymethylbilane_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018480</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.61</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_464f1d0a-4d4a-4d95-95d5-4d7134b70ca8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.61"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppbng_c" stoichiometry="4"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hmbil_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="4"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RBFSa" metaid="aefd8b19-116a-4449-8353-ad4f3ae9953a" name="riboflavin_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009780</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#aefd8b19-116a-4449-8353-ad4f3ae9953a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009780"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_db4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4r5au_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dmlz_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CU2tpp" metaid="_6e01cc85-1914-4f02-916d-8d6a5976fbb8" name="copper_transport_in_via_permease__no_H__" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6e01cc85-1914-4f02-916d-8d6a5976fbb8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cu2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cu2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LIPAabcpp" metaid="_9ca89924-0cf9-4d37-98d9-9597dc5d2f52" name="R_LIPAabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9ca89924-0cf9-4d37-98d9-9597dc5d2f52"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_kdo2lipidA_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipidA_XF_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PAPSR2" metaid="_94d14f04-db64-4886-9e29-e7c1d808685f" name="R_PAPSR2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_002720 AND XFCFBP8418_012410 ) OR ( XFCFBP8418_002720 AND XFCFBP8418_013020 ) OR ( XFCFBP8418_002720 AND XFCFBP8418_021660 ) OR ( or )</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 1.8.4.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_94d14f04-db64-4886-9e29-e7c1d808685f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.4.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012410"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021660"/> + </fbc:and> + <fbc:geneProductRef fbc:geneProduct="or"/> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002720"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013020"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_grxrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_paps_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pap_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_so3_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_grxox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HXPRT" metaid="e06109e7-8772-41b8-97c4-aad71904ef31" name="hypoxanthine_phosphoribosyltransferase__Hypoxanthine_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021340</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.4.2.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e06109e7-8772-41b8-97c4-aad71904ef31"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hxan_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_prpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_imp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MTAP" metaid="_3a4a1688-0e11-4ed9-96ac-fb9352ef8b1a" name="R_MTAP" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021330</p> + <p>SUBSYSTEM: Cysteine_and_methionine_metabolism</p> + <p>EC_NUMBER: 2.4.2.28</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3a4a1688-0e11-4ed9-96ac-fb9352ef8b1a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.4.2.28"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021330"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5mta_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ade_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_5mdr1p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGPP161pp" metaid="ebb9f9f4-9f9d-4cbf-9dd9-d70d2bad7788" name="phosphatidylglycerol_phosphate_phosphatase__periplasm__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026710</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 3.1.3.27</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ebb9f9f4-9f9d-4cbf-9dd9-d70d2bad7788"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.27"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pgp161_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pg161_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OMPHHX" metaid="d1515964-e28b-41f8-9aaf-420a0992a400" name="2_octaprenyl_6_methoxyphenol_hydroxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010930</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d1515964-e28b-41f8-9aaf-420a0992a400"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010930"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2omph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="0.5"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ombzl_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EDD" metaid="_669cb284-2f5e-4613-bf55-8d2e43585a6b" name="6_phosphogluconate_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024710</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 4.2.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_669cb284-2f5e-4613-bf55-8d2e43585a6b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_6pgc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2ddg6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FRUptspp" metaid="_3b1cf144-0566-4f11-a09e-1c5e373c4a7a" name="D_fructose_transport_via_PEP_Pyr_PTS__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3b1cf144-0566-4f11-a09e-1c5e373c4a7a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_fru_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_f1p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EDA" metaid="c0c41082-29b9-4aac-8e49-b75631a23d96" name="2_dehydro_3_deoxy_phosphogluconate_aldolase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024720</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 4.1.2.14</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c0c41082-29b9-4aac-8e49-b75631a23d96"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.14"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ddg6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AGM4Pt2pp" metaid="cd579a5d-365c-4fdc-8ab1-8c1302bed8f1" name="GlcNAc_anhMurNAc_tetrapeptide_transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015550</p> + <p>SUBSYSTEM: Murein_Recycling</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cd579a5d-365c-4fdc-8ab1-8c1302bed8f1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015550"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_anhgm4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_anhgm4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PROT_LesA_BioS" metaid="cbdde19f-0825-4050-8f2c-5a4159aa0680" name="R_PROT_LesA_BioS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011400</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cbdde19f-0825-4050-8f2c-5a4159aa0680"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011400"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asptrna_c" stoichiometry="23"/> + <speciesReference constant="true" species="M_glutrna_c" stoichiometry="17"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1997.72"/> + <speciesReference constant="true" species="M_asntrna_c" stoichiometry="37"/> + <speciesReference constant="true" species="M_phetrna_c" stoichiometry="22"/> + <speciesReference constant="true" species="M_glytrna_c" stoichiometry="59"/> + <speciesReference constant="true" species="M_glntrna_c" stoichiometry="34"/> + <speciesReference constant="true" species="M_cystrna_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_trptrna_c" stoichiometry="11"/> + <speciesReference constant="true" species="M_protrna_c" stoichiometry="28"/> + <speciesReference constant="true" species="M_valtrna_c" stoichiometry="25"/> + <speciesReference constant="true" species="M_sertrna_c" stoichiometry="47"/> + <speciesReference constant="true" species="M_argtrna_c" stoichiometry="21"/> + <speciesReference constant="true" species="M_thrtrna_c" stoichiometry="63"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1997.72"/> + <speciesReference constant="true" species="M_alatrna_c" stoichiometry="60"/> + <speciesReference constant="true" species="M_iletrna_c" stoichiometry="29"/> + <speciesReference constant="true" species="M_lystrna_c" stoichiometry="15"/> + <speciesReference constant="true" species="M_leutrna_c" stoichiometry="58"/> + <speciesReference constant="true" species="M_mettrna_c" stoichiometry="7"/> + <speciesReference constant="true" species="M_tyrtrna_c" stoichiometry="28"/> + <speciesReference constant="true" species="M_histrna_c" stoichiometry="14"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_trnahis_c" stoichiometry="14"/> + <speciesReference constant="true" species="M_LesA_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_trnaile_c" stoichiometry="29"/> + <speciesReference constant="true" species="M_trnaarg_c" stoichiometry="21"/> + <speciesReference constant="true" species="M_trnathr_c" stoichiometry="63"/> + <speciesReference constant="true" species="M_trnaala_c" stoichiometry="60"/> + <speciesReference constant="true" species="M_trnapro_c" stoichiometry="28"/> + <speciesReference constant="true" species="M_trnamet_c" stoichiometry="7"/> + <speciesReference constant="true" species="M_trnaser_c" stoichiometry="47"/> + <speciesReference constant="true" species="M_trnacys_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_trnaasp_c" stoichiometry="23"/> + <speciesReference constant="true" species="M_trnatrp_c" stoichiometry="11"/> + <speciesReference constant="true" species="M_trnaasn_c" stoichiometry="37"/> + <speciesReference constant="true" species="M_trnagln_c" stoichiometry="34"/> + <speciesReference constant="true" species="M_trnaphe_c" stoichiometry="22"/> + <speciesReference constant="true" species="M_trnatyr_c" stoichiometry="28"/> + <speciesReference constant="true" species="M_trnagly_c" stoichiometry="59"/> + <speciesReference constant="true" species="M_trnaval_c" stoichiometry="25"/> + <speciesReference constant="true" species="M_trnaglu_c" stoichiometry="17"/> + <speciesReference constant="true" species="M_trnaleu_c" stoichiometry="58"/> + <speciesReference constant="true" species="M_trnalys_c" stoichiometry="15"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1997.72"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1997.72"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AMPTASECG" metaid="_9c0dc877-c529-45e2-ab06-fabb4fc1ce55" name="alanyl_aminopeptidase__cys_gly_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002800</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 3.4.11.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9c0dc877-c529-45e2-ab06-fabb4fc1ce55"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.11.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cgly_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NH4tpp" metaid="f64fe1cf-9c3a-49ec-b329-1981fc7ebfe7" name="ammonia_reversible_transport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_017690</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f64fe1cf-9c3a-49ec-b329-1981fc7ebfe7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_017690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nh4_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SHCHD2" metaid="_19647eb7-b93d-447a-88e3-c64aa879bebd" name="R_SHCHD2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010970</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.1.76</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_19647eb7-b93d-447a-88e3-c64aa879bebd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.76"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010970"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dscl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_scl_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CU2_bd_CopA" metaid="_14797287-fd1a-4dfc-b300-9daffa59e830" name="Copper_sequestration_by_cop_system" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015250</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_14797287-fd1a-4dfc-b300-9daffa59e830"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cu2_p" stoichiometry="11"/> + <speciesReference constant="true" species="M_CopA_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_11cu2s_CopA_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THBPTD" metaid="_8622fea6-35d5-4e81-9aef-5a66f3939348" name="R_THBPTD" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012500</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.96</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8622fea6-35d5-4e81-9aef-5a66f3939348"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.96"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012500"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_thbpt4acam_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhbpt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYt2pp" metaid="_7f478a86-dcba-4b43-bdfa-bf36dbd733b1" name="R_GLYt2pp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7f478a86-dcba-4b43-bdfa-bf36dbd733b1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gly_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LPSabctpp" metaid="_458e980d-70fa-448b-ac26-8d00fb518e9a" name="Oantigen_core_kdo_lipidA_Ralstonia_solanacearum_specific_LPS_transport_via_ABC_system_periplasm_to_extracellular_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_458e980d-70fa-448b-ac26-8d00fb518e9a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_OLPS_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_OLPS_XF_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EDTXS1XF" metaid="cfeb2f99-37cd-4276-ac54-5a875d5bdb62" name="R_EDTXS1XF" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004060 ) OR ( XFCFBP8418_015020 )</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.3.1.-</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cfeb2f99-37cd-4276-ac54-5a875d5bdb62"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.-"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004060"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015020"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3hddecACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_kdo2lipid4_XF_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_kdo2lipid4HL_XF_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SERAT" metaid="f5fb0f47-8e33-4507-9a9b-1ff077874e4e" name="serine_O_acetyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 2.3.1.30</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f5fb0f47-8e33-4507-9a9b-1ff077874e4e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.30"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ser_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acser_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPND" metaid="ac05b5bb-aec3-4b65-899f-cd0db43b95f1" name="prephenate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021200</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 1.3.1.12</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ac05b5bb-aec3-4b65-899f-cd0db43b95f1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.12"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021200"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pphn_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_34hpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GK1" metaid="_64b44538-0b98-4e14-9b37-8a43ee722e14" name="guanylate_kinase__GMP_ATP_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002650</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 2.7.4.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_64b44538-0b98-4e14-9b37-8a43ee722e14"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.4.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LEUabcpp" metaid="_2f7463c0-9137-4d02-a616-6b7f9216f12f" name="L_leucine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004750</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2f7463c0-9137-4d02-a616-6b7f9216f12f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_leu_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_leu_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR100" metaid="_7c30b382-8242-4ab9-bd3e-8a33ee49fe78" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C10_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7c30b382-8242-4ab9-bd3e-8a33ee49fe78"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3odecACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hdecACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA120" metaid="dd342e79-834f-45bb-b41c-ea27503d1749" name="Phosphatidylglycerol_synthase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#dd342e79-834f-45bb-b41c-ea27503d1749"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdddecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp120_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT181" metaid="e2a02f7a-7ed8-4efb-a6f8-c77334a40727" name="R_G3PAT181" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e2a02f7a-7ed8-4efb-a6f8-c77334a40727"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_octeACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1odec11eg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDP" metaid="a30b4cb1-c39f-485d-b604-4468b4e83d36" name="thiamin_pyrophosphatase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003250</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.6.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a30b4cb1-c39f-485d-b604-4468b4e83d36"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003250"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thmpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thmmp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FE2abcpp" metaid="ee7de55c-cb84-47e5-97b0-5eb5fa96d008" name="iron__II__transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009910</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ee7de55c-cb84-47e5-97b0-5eb5fa96d008"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fe2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ABUTt2pp" metaid="_0873f427-e010-46ae-a840-180cb283a6e9" name="4_aminobutyrate_transport_in_via_proton_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0873f427-e010-46ae-a840-180cb283a6e9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4abut_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4abut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADCL" metaid="_421e0e7b-eb65-4739-b2eb-75149316d48e" name="R_ADCL" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014810</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.3.38</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_421e0e7b-eb65-4739-b2eb-75149316d48e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.3.38"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4adcho_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4abz_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MSO3tex" metaid="bd3c6ae0-56d8-4f23-987a-2cb585fdf959" name="methanesulfonate_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_007680 ) OR ( XFCFBP8418_009840 )</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#bd3c6ae0-56d8-4f23-987a-2cb585fdf959"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009840"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mso3_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mso3_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DDGLK" metaid="_5fbef3c5-b93b-4d9c-984d-f6e1c4771e76" name="2_dehydro_3_deoxygluconokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018640</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 2.7.1.45</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5fbef3c5-b93b-4d9c-984d-f6e1c4771e76"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.45"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018640"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2ddglcn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2ddg6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PStex" metaid="_05abaed6-9268-45a3-a535-ae3145a6cf90" name="glycerophosphserine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_05abaed6-9268-45a3-a535-ae3145a6cf90"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3ps_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3ps_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DNMPPA" metaid="d68c6357-31ae-4f64-b842-d623ff70f374" name="R_DNMPPA" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d68c6357-31ae-4f64-b842-d623ff70f374"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhpmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dhnpt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OCTDPS" metaid="_7b300b6d-9a30-4887-843a-eaf6b31bb960" name="Octaprenyl_pyrophosphate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003680</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.5.1.90</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7b300b6d-9a30-4887-843a-eaf6b31bb960"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.90"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_frdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ipdp_c" stoichiometry="5"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_octdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="5"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PAT180" metaid="_38af430f-3a01-4373-8d04-5804967f5bee" name="R_G3PAT180" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005900 AND XFCFBP8418_024990</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.3.1.15</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_38af430f-3a01-4373-8d04-5804967f5bee"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.3.1.15"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024990"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005900"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ocdcaACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_1odecg3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADCS" metaid="ffa3c12c-7325-455c-98a8-f7a8129c38bf" name="4_amino_4_deoxychorismate_synthase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026740 AND XFCFBP8418_026750</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.6.1.85</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ffa3c12c-7325-455c-98a8-f7a8129c38bf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.85"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026750"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026740"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_chor_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4adcho_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CAT" metaid="fa3bfb33-f625-44fa-871f-05e8405fde85" name="catalase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020430</p> + <p>SUBSYSTEM: Superoxide_radicals_degradation</p> + <p>EC_NUMBER: 1.11.1.6</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fa3bfb33-f625-44fa-871f-05e8405fde85"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.11.1.6"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020430"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MDDCP1pp" metaid="_6de2d860-2eac-437b-98f7-61ce1498d5ea" name="murein_D_D_carboxypeptidase__murein5px4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_018620 ) OR ( XFCFBP8418_020420 )</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.16.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6de2d860-2eac-437b-98f7-61ce1498d5ea"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.16.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020420"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018620"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein5px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4px4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PIabcpp" metaid="_9b5da76b-7854-44f0-bb9b-bd39c77a57b5" name="sn_glycerol_3_phosphoethanolamine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b5da76b-7854-44f0-bb9b-bd39c77a57b5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g3pi_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_THRA2r" metaid="_20397b20-c6a8-4d60-ab1f-8c57d84dbfd5" name="R_THRA2r" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 4.1.2.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_20397b20-c6a8-4d60-ab1f-8c57d84dbfd5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.2.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_athr_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_acald_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA140abcpp" metaid="_73451555-2031-45ca-8d40-f38b9705fd4c" name="phosphatidate_transport_via_ABC_system__n_C14_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_73451555-2031-45ca-8d40-f38b9705fd4c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pa140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa140_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NADPPPS" metaid="_8642b33f-f57f-4f89-bf54-a52a7bba4577" name="R_NADPPPS" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8642b33f-f57f-4f89-bf54-a52a7bba4577"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GF6PTAr" metaid="_55795965-f6a5-4dfd-9b76-36e12c5fb995" name="Glutamine_fructose_6_phosphate_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015350</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.6.1.16</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_55795965-f6a5-4dfd-9b76-36e12c5fb995"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.16"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015350"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gam6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PE181abcpp" metaid="d46ef64c-487c-497d-8283-03e2e7a2d0ac" name="phosphatidylethanolamine_transport_via_ABC_system__n_C18_1__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d46ef64c-487c-497d-8283-03e2e7a2d0ac"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pe181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pe181_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GALU" metaid="_544cd7d9-e0e5-4a34-b011-adef2e62a0c5" name="UTP_glucose_1_phosphate_uridylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004800</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_544cd7d9-e0e5-4a34-b011-adef2e62a0c5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004800"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_utp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g1p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OHPHM" metaid="_4a26de74-3974-41fa-b3f6-bcec426c17ad" name="2_octaprenyl_6_hydroxyphenol_methylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005180</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.1.1.222</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_4a26de74-3974-41fa-b3f6-bcec426c17ad"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.1.1.222"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_amet_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2ohph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2omph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_orn_e" metaid="_088ee4bb-574c-4b38-a9c4-209816251311" name="R_EX_orn_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_088ee4bb-574c-4b38-a9c4-209816251311"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_orn_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GMAND" metaid="de5417ed-2086-4f4b-9e9f-6c417ab0def2" name="GDP_D_mannose_dehydratase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006460</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.2.1.47</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#de5417ed-2086-4f4b-9e9f-6c417ab0def2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.47"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006460"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gdpmann_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gdpddman_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_asp_L_e" metaid="_76bf29d6-ef42-4e37-92ff-f6a1d3c6af71" name="R_EX_asp_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76bf29d6-ef42-4e37-92ff-f6a1d3c6af71"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_asp_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PFK" metaid="_06084ea6-8cc7-45f2-a738-c1a406c8b1c5" name="phosphofructokinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026080</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 2.7.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_06084ea6-8cc7-45f2-a738-c1a406c8b1c5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fdp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RZ5PP" metaid="ee88117f-9d1b-4189-a13b-519ac6453e68" name="alpha_ribazole_5_phosphate_phosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_016540</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.3.73</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ee88117f-9d1b-4189-a13b-519ac6453e68"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.73"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016540"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5prdmbz_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_rdmbzi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SHKK" metaid="_2d9d7940-36f9-4f52-b34a-728428042344" name="R_SHKK" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004160</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.7.1.71</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2d9d7940-36f9-4f52-b34a-728428042344"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.71"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004160"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_skm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_skm5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ILETRS" metaid="_7a91f907-41a1-4510-9097-94a0db7c8bd8" name="Isoleucyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004680</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7a91f907-41a1-4510-9097-94a0db7c8bd8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004680"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnaile_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ile_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_iletrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_OAADC" metaid="_76151d46-e9d6-4024-8dab-ff726b55cd2d" name="oxaloacetate_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024720</p> + <p>SUBSYSTEM: Pyruvate_Metabolism</p> + <p>EC_NUMBER: 4.1.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76151d46-e9d6-4024-8dab-ff726b55cd2d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024720"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA180" metaid="_111dd9ad-2aa2-4381-b911-a711ed7d11c7" name="Phosphatidylglycerol_synthase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_111dd9ad-2aa2-4381-b911-a711ed7d11c7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdodecg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp180_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CPPPGO" metaid="d2e24363-f133-494a-a677-1b18d8215636" name="coproporphyrinogen_oxidase__O2_required_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014340</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.3.3.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d2e24363-f133-494a-a677-1b18d8215636"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.3.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_cpppg3_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pppg9_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SELGTHR3" metaid="_107a69f9-5d98-4b62-a714-dc37ee6216be" name="R_SELGTHR3" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_107a69f9-5d98-4b62-a714-dc37ee6216be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gslnt_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_seln_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALATA_L2" metaid="_45b027a6-2c7d-47ef-8c0d-f5acf5c34a3d" name="alanine_transaminase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009820</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_45b027a6-2c7d-47ef-8c0d-f5acf5c34a3d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pydx5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyam5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SELGTHR2" metaid="_30c97ae2-cdd1-4bbb-8055-d3664764f4a4" name="R_SELGTHR2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_30c97ae2-cdd1-4bbb-8055-d3664764f4a4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dgslnt_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gslnt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALAALAr" metaid="_24c7b076-cdab-4831-b204-b476262b1791" name="D_alanine_D_alanine_ligase__reversible_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011240</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_24c7b076-cdab-4831-b204-b476262b1791"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_alaala_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LEUTA" metaid="_05f67c70-fa33-411d-9a41-34703156a6c2" name="leucine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014480</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_05f67c70-fa33-411d-9a41-34703156a6c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4mop_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_leu_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHORD2" metaid="_3ad623d7-86a9-404a-9bd2-2cf74d4619f3" name="dihydoorotic_acid_dehydrogenase__quinone8_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012210</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 1.3.5.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3ad623d7-86a9-404a-9bd2-2cf74d4619f3"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.5.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012210"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_q8_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhor_S_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_q8h2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_orot_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DALAt2pp" metaid="_1ff9f0b8-ce7a-42a1-90f1-aeae01fbd231" name="D_alanine_transport_in_via_proton_symport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1ff9f0b8-ce7a-42a1-90f1-aeae01fbd231"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK120" metaid="_11033452-cc4c-4650-a396-3d597ed06cd1" name="diacylglycerol_kinase__n_C12_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_11033452-cc4c-4650-a396-3d597ed06cd1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr120_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa120_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MLDCP1Bpp" metaid="_5dbd4070-184a-4621-b940-68cfc8ce8556" name="murein_L_D_carboxypeptidase__murein4p4p___periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5dbd4070-184a-4621-b940-68cfc8ce8556"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_murein4p4p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_murein4p3p_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ala_D_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOBDtex" metaid="_9770389f-8fa3-4b15-ba1d-935bf3d71dd5" name="molybdate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9770389f-8fa3-4b15-ba1d-935bf3d71dd5"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mobd_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_mobd_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_h_e" metaid="_6d564f4a-c974-441f-ae92-d03171c99d4d" name="R_EX_h_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6d564f4a-c974-441f-ae92-d03171c99d4d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA181" metaid="_11a1a22d-37be-440a-a711-ec0fe67162bb" name="Phosphatidylglycerol_synthase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_11a1a22d-37be-440a-a711-ec0fe67162bb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdodec11eg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pgp181_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR80x" metaid="_72f99711-8e3b-4cc9-9323-c8aad8721e38" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C8_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_72f99711-8e3b-4cc9-9323-c8aad8721e38"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_toct2eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ocACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AHC" metaid="_0b7de0b5-f401-4d97-8a9f-8eb9522dddab" name="adenosylhomocysteinase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024950</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 3.3.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0b7de0b5-f401-4d97-8a9f-8eb9522dddab"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.3.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024950"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ahcys_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hcys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adn_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_cu2_e" metaid="b7507095-bd33-4161-93c4-eaca0ae599dd" name="R_EX_cu2_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b7507095-bd33-4161-93c4-eaca0ae599dd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_cu2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PA160abcpp" metaid="_9b0428b8-556c-4454-8bc3-b94c8ff0ea25" name="phosphatidate_transport_via_ABC_system__n_C16_0__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004550 ) OR ( XFCFBP8418_024530 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b0428b8-556c-4454-8bc3-b94c8ff0ea25"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024530"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa160_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DTARTD" metaid="_0fb060a3-26e6-4409-8280-0c3cefaeaa6e" name="R_DTARTD" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_016890</p> + <p>SUBSYSTEM: Alternate_Carbon_Metabolism</p> + <p>EC_NUMBER: 4.2.1.81</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0fb060a3-26e6-4409-8280-0c3cefaeaa6e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.81"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016890"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tartr_D_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_oaa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK140" metaid="cc7f6070-3430-47ce-93f0-9c6d4b2f457b" name="diacylglycerol_kinase__n_C14_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#cc7f6070-3430-47ce-93f0-9c6d4b2f457b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa140_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GAMptspp" metaid="e0d5d1a3-ddc8-41b4-856f-377ddf310888" name="R_GAMptspp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_003570 AND XFCFBP8418_003580</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e0d5d1a3-ddc8-41b4-856f-377ddf310888"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003580"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003570"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gam_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gam6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_cl_e" metaid="f8f49550-bbf1-40a3-a701-6d7344888a6b" name="R_EX_cl_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f8f49550-bbf1-40a3-a701-6d7344888a6b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_cl_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ICDHyr2" metaid="f8884270-c678-4594-b521-5da61fd3b43f" name="R_ICDHyr2" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_012420 ) OR ( XFCFBP8418_013290 )</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 1.1.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f8884270-c678-4594-b521-5da61fd3b43f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013290"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012420"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_icit_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_osucc_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ICDHyr1" metaid="_3a6f37a3-e30d-4a3b-8d44-13b859c82de6" name="R_ICDHyr1" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_012420 AND XFCFBP8418_013290</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: 1.1.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3a6f37a3-e30d-4a3b-8d44-13b859c82de6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013290"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_012420"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_osucc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_SULRi" metaid="_9f7fedea-e778-446b-bc21-34963625af49" name="sulfite_reductase__NADPH2_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002700 AND XFCFBP8418_002710</p> + <p>SUBSYSTEM: Cysteine_Metabolism</p> + <p>EC_NUMBER: 1.8.1.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9f7fedea-e778-446b-bc21-34963625af49"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.8.1.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002710"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002700"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="5"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_so3_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="3"/> + <speciesReference constant="true" species="M_h2s_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GUAtex" metaid="d24cd184-9dfb-47d8-b10d-348f4fd24257" name="R_GUAtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d24cd184-9dfb-47d8-b10d-348f4fd24257"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gua_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gua_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AP4AHr" metaid="_8d72706a-895d-42d5-a37e-40cccdc2ab26" name="Ap4A_hydrolase__reversible" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019500</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.41</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_8d72706a-895d-42d5-a37e-40cccdc2ab26"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.41"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019500"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ap4a_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_adp_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TPI" metaid="_125ccb2b-525a-42f5-81b7-02d29f5fb24f" name="triose_phosphate_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025760</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 5.3.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_125ccb2b-525a-42f5-81b7-02d29f5fb24f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025760"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_gal_e" metaid="ba58e059-2307-4b18-8399-109a35fb43ae" name="R_EX_gal_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ba58e059-2307-4b18-8399-109a35fb43ae"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_gal_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G1SAT" metaid="_9d7a712e-8036-4241-b97e-2a49121b73fb" name="glutamate_1_semialdehyde_aminotransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019220</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 5.4.3.8</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d7a712e-8036-4241-b97e-2a49121b73fb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.3.8"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019220"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glu1sa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5aop_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MALDt2_2pp" metaid="_9d80ccee-607d-48c9-8ca3-0257333fd2c2" name="R_MALDt2_2pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025480</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9d80ccee-607d-48c9-8ca3-0257333fd2c2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_mal_D_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_mal_D_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PSCVT" metaid="f2421df1-2a4a-40c2-91e7-b4b36d3cdb64" name="R_PSCVT" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021080</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.5.1.19</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f2421df1-2a4a-40c2-91e7-b4b36d3cdb64"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.19"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_skm5p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3psme_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK141" metaid="_97f73aaa-f158-4c0e-aec5-f92f1805f78f" name="diacylglycerol_kinase__n_C14_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_97f73aaa-f158-4c0e-aec5-f92f1805f78f"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pa141_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_his_L_e" metaid="_85b6e06f-04c1-444b-ad7e-ed6799502f98" name="R_EX_his_L_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_85b6e06f-04c1-444b-ad7e-ed6799502f98"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_his_L_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AIRC3" metaid="ecbfc67d-3b62-4c1b-9c28-271f7d2c6306" name="phosphoribosylaminoimidazole_carboxylase__mutase_rxn_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013040</p> + <p>SUBSYSTEM: Purine_and_Pyrimidine_Biosynthesis</p> + <p>EC_NUMBER: 5.44.99.18</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ecbfc67d-3b62-4c1b-9c28-271f7d2c6306"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.44.99.18"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013040"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_5aizc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_5caiz_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA160" metaid="e83a89d6-60a6-4fdf-af63-c21ef4f53c8b" name="Phosphatidylglycerol_synthase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e83a89d6-60a6-4fdf-af63-c21ef4f53c8b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cdpdhdecg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp160_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CLtex" metaid="_29c0101f-cf5a-4dbb-bfd3-56c9a20ff991" name="chloride__Cl_1__transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_29c0101f-cf5a-4dbb-bfd3-56c9a20ff991"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cl_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cl_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGSA161" metaid="af2c3417-84b9-4d18-b71e-5b21a9c40fbd" name="Phosphatidylglycerol_synthase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019130</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.8.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#af2c3417-84b9-4d18-b71e-5b21a9c40fbd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.8.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019130"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc3p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cdpdhdec9eg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cmp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pgp161_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ADPRDP" metaid="_3dd0ab87-7f08-4cbc-b1eb-776e8b53e3d6" name="ADPribose_diphosphatase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015820</p> + <p>SUBSYSTEM: Nucleotide_Salvage_Pathway</p> + <p>EC_NUMBER: 3.6.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3dd0ab87-7f08-4cbc-b1eb-776e8b53e3d6"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adprib_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CITt3pp" metaid="_3b77a00f-04d5-425a-b636-33691ff010bf" name="R_CITt3pp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3b77a00f-04d5-425a-b636-33691ff010bf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cit_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_cit_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK160" metaid="e579cbe8-097c-441e-a6ee-baef4eade8aa" name="diacylglycerol_kinase__n_C16_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e579cbe8-097c-441e-a6ee-baef4eade8aa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_12dgr160_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa160_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGM" metaid="fdb69f82-0373-429f-807b-f88bbdc5decf" name="phosphoglycerate_mutase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_016460 ) OR ( XFCFBP8418_016540 ) OR ( XFCFBP8418_027800 )</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 5.4.2.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#fdb69f82-0373-429f-807b-f88bbdc5decf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.4.2.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016460"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027800"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016540"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2pg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_3pg_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DAGK161" metaid="_57b3c827-2fa6-4e81-bdb0-6de5f1ef6e6d" name="diacylglycerol_kinase__n_C16_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_021180</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 2.7.1.107</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_57b3c827-2fa6-4e81-bdb0-6de5f1ef6e6d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.107"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_021180"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_12dgr161_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pa161_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGL" metaid="_812b8f84-9415-4423-bf06-846d2009b538" name="6_phosphogluconolactonase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024700</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 3.1.1.31</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_812b8f84-9415-4423-bf06-846d2009b538"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.1.31"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024700"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_6pgl_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_6pgc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FLDR2" metaid="_2953c195-068f-432b-93b0-4f1799543fe8" name="R_FLDR2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_016500 AND XFCFBP9418_023100 ) OR ( XFCFBP8418_027840 AND XFCFBP9418_023100 )</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2953c195-068f-432b-93b0-4f1799543fe8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_016500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP9418_023100"/> + </fbc:and> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_027840"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP9418_023100"/> + </fbc:and> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_flxso_c" stoichiometry="2"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_flxr_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGK" metaid="_949a5780-a027-4b9b-b6cc-7989c5178314" name="phosphoglycerate_kinase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_011060</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 2.7.2.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_949a5780-a027-4b9b-b6cc-7989c5178314"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.2.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_011060"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3pg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_13dpg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLCt2" metaid="_1faff6b2-1f14-4c76-802e-e8c49a977d16" name="R_GLCt2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018650</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1faff6b2-1f14-4c76-802e-e8c49a977d16"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + <speciesReference constant="true" species="M_glc_D_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glc_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PGI" metaid="_26382bd4-e92e-48aa-9edc-9d7820f1cb06" name="glucose_6_phosphate_isomerase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_026530</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 5.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_26382bd4-e92e-48aa-9edc-9d7820f1cb06"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/5.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_026530"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_g6p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACALDtex" metaid="d2ea4b50-f902-4a7b-95c2-550da0ba9fa8" name="R_ACALDtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d2ea4b50-f902-4a7b-95c2-550da0ba9fa8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_acald_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_acald_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FMNAT" metaid="_2bdf44c5-2cb6-4296-9c5d-5dac7b98b1cf" name="FMN_adenylyltransferase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_004690</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.7.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2bdf44c5-2cb6-4296-9c5d-5dac7b98b1cf"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.7.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004690"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_fmn_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DDPA" metaid="a2fb8836-002f-4c28-8bc6-8cf23e5bdac7" name="3_deoxy_D_arabino_heptulosonate_7_phosphate_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014390</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.5.1.54</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a2fb8836-002f-4c28-8bc6-8cf23e5bdac7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.54"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014390"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_e4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2dda7p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGSL" metaid="_73e88ab8-feb4-43b9-8bbf-485162c2718d" name="argininosuccinate_lyase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025240</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 4.3.2.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_73e88ab8-feb4-43b9-8bbf-485162c2718d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.2.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_argsuc_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fum_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_arg_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PYRt2rtex" metaid="_068a01f8-c04d-4345-b5f5-d8bf4d8d4c07" name="R_PYRt2rtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_068a01f8-c04d-4345-b5f5-d8bf4d8d4c07"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_pyr_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_pyr_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_QUINDH" metaid="aa2efde8-2998-4ec0-9559-7a9ca2a9663c" name="Quinate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006320</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.282</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#aa2efde8-2998-4ec0-9559-7a9ca2a9663c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.282"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006320"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_quin_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_3dhq_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HSDy" metaid="db1afa15-7d63-44d6-983a-300bb048428d" name="homoserine_dehydrogenase__NADPH_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020380</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 1.1.1.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#db1afa15-7d63-44d6-983a-300bb048428d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020380"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hom_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_aspsa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ARGSSr" metaid="_9a2533a8-f05d-4605-871e-87af7ee80f95" name="argininosuccinate_synthase__reversible" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025280</p> + <p>SUBSYSTEM: Arginine_and_Proline_Metabolism</p> + <p>EC_NUMBER: 6.3.4.5</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a2533a8-f05d-4605-871e-87af7ee80f95"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.4.5"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025280"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_citr_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_argsuc_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDSR2" metaid="c375b01a-4888-4059-b1a1-e8c71408675b" name="R_TDSR2" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_006350</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c375b01a-4888-4059-b1a1-e8c71408675b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006350"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dsbgox_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbdrd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dsbdox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbgrd_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PTRCtex" metaid="_5db91d6a-04ad-40cb-b1b5-2848ea4e3112" name="putrescine_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5db91d6a-04ad-40cb-b1b5-2848ea4e3112"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ptrc_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ptrc_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EX_glyc_e" metaid="_303676b7-c2e0-4189-9634-db8aa9abc05b" name="R_EX_glyc_e" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Extracellular_exchange</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_303676b7-c2e0-4189-9634-db8aa9abc05b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants/> + <listOfProducts> + <speciesReference constant="true" species="M_glyc_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLUSy" metaid="_946e491d-30ef-4d22-a21c-f94daf2b1f67" name="glutamate_synthase__NADPH_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_013350 AND XFCFBP8418_013360</p> + <p>SUBSYSTEM: Glutamate_Metabolism_</p> + <p>EC_NUMBER: 1.4.1.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_946e491d-30ef-4d22-a21c-f94daf2b1f67"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.4.1.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013360"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013350"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gln_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TDSR1" metaid="f7f2d2f9-df08-44da-9732-c9e15a1a2499" name="thiol_disulfide_reductase__DsbC_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_003390 AND XFCFBP8418_006350</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f7f2d2f9-df08-44da-9732-c9e15a1a2499"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006350"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_003390"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_dsbcox_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbdrd_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dsbcrd_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_dsbdox_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYC2Ptex" metaid="_6abfaec7-5d82-4094-807e-05351db886a4" name="sn_Glycerol_2_phosphate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6abfaec7-5d82-4094-807e-05351db886a4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyc2p_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glyc2p_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METtex" metaid="e0857c6d-dcd9-4cf5-b3eb-c3ee4d21708b" name="L_methionine_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e0857c6d-dcd9-4cf5-b3eb-c3ee4d21708b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_met_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_met_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_LEUTRS" metaid="_01e8e603-05fa-4f85-aace-eada9cdc28e4" name="Leucyl_tRNA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_019710</p> + <p>SUBSYSTEM: tRNA_Charging</p> + <p>EC_NUMBER: 6.1.1.4</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_01e8e603-05fa-4f85-aace-eada9cdc28e4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.1.1.4"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019710"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_trnaleu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_leu_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_leutrna_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MEOHtrpp" metaid="_9a3cb379-45c8-4d8e-bd23-8f379fc7ff68" name="Methanol_reversible_transport_via_diffusion__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9a3cb379-45c8-4d8e-bd23-8f379fc7ff68"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_meoh_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_meoh_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MANtex" metaid="_96653a75-107b-4a14-bcf3-12e782efb8b2" name="R_MANtex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_96653a75-107b-4a14-bcf3-12e782efb8b2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_man_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_man_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOX1abcpp" metaid="b96939fb-79ad-441c-a13b-77a4dea207dd" name="R_METSOX1abcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b96939fb-79ad-441c-a13b-77a4dea207dd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_metsox_S_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_metsox_S_L_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_METSOX2tex" metaid="_5f779722-a885-4f0e-a40c-1f4eb862d134" name="R_METSOX2tex" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f779722-a885-4f0e-a40c-1f4eb862d134"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_metsox_R_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_metsox_R_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PEabcpp" metaid="c63ec343-9b0f-4bd1-acdd-4cf5c0d9da79" name="sn_glycerol_3_phosphoethanolamine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c63ec343-9b0f-4bd1-acdd-4cf5c0d9da79"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pe_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3pe_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_EAR60x" metaid="f98904b1-2fec-4b9d-8d23-1ed5d71a8fff" name="enoyl__acyl_carrier_protein__reductase__NADH___n_C6_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010080</p> + <p>SUBSYSTEM: Glycerophospholipid_Metabolism</p> + <p>EC_NUMBER: 1.3.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f98904b1-2fec-4b9d-8d23-1ed5d71a8fff"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010080"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_thex2eACP_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hexACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NI2t3tex" metaid="_0fcc3404-73b7-408c-9516-cf5711a5b2d8" name="R_NI2t3tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_0fcc3404-73b7-408c-9516-cf5711a5b2d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ni2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ni2_e" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_MOPG" metaid="_6c1b1e0c-1214-43dc-ae88-48c6e32c6574" name="R_MOPG" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: Spontaneous</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6c1b1e0c-1214-43dc-ae88-48c6e32c6574"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="Spontaneous"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3c4mop_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_4mop_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ACS" metaid="f82a531b-3cfb-4432-a2a9-fc2b1ea7a29b" name="acetyl_CoA_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020630</p> + <p>SUBSYSTEM: Pyruvate_Metabolism</p> + <p>EC_NUMBER: 6.2.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f82a531b-3cfb-4432-a2a9-fc2b1ea7a29b"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.2.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020630"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ac_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_amp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ppi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE60" metaid="f3b291e6-d971-4169-8526-c6cc47f9af28" name="R_FACOAE60" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#f3b291e6-d971-4169-8526-c6cc47f9af28"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hxcoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_hxa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TKT2" metaid="a875eaae-aebe-409c-bfb2-26d163f234fb" name="transketolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000640</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 2.2.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a875eaae-aebe-409c-bfb2-26d163f234fb"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000640"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_xu5p_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_e4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_f6p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DHDPS" metaid="b5cb189a-d585-442f-bd55-649ff74e2a26" name="dihydrodipicolinate_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_009670</p> + <p>SUBSYSTEM: Threonine_and_Lysine_Metabolism</p> + <p>EC_NUMBER: 4.3.3.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b5cb189a-d585-442f-bd55-649ff74e2a26"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.3.3.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_009670"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_aspsa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_23dhdp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TKT1" metaid="e836e051-ab3f-4c80-bc79-1cc08254d046" name="transketolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000640</p> + <p>SUBSYSTEM: Pentose_Phosphate_Pathway</p> + <p>EC_NUMBER: 2.2.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e836e051-ab3f-4c80-bc79-1cc08254d046"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.2.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000640"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_xu5p_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_r5p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_s7p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PHETA1" metaid="_87ac1595-703b-4256-851b-cbf43c1556dd" name="phenylalanine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_014480</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.58</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_87ac1595-703b-4256-851b-cbf43c1556dd"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.58"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014480"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phe_L_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_phpyr_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE100" metaid="_6b0eb87a-7795-4f00-b3ef-190b2a0ad83c" name="R_FACOAE100" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_6b0eb87a-7795-4f00-b3ef-190b2a0ad83c"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dcacoa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dca_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_4PEPTabcpp" metaid="_3d8f4895-48d4-4116-bfd5-088e7038a524" name="tetrapeptide__LalaDgluMdapDala__transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004070 ) OR ( XFCFBP8418_004550 ) OR ( XFCFBP8418_007680 ) OR ( XFCFBP8418_010500 ) OR ( XFCFBP8418_013240 ) OR ( XFCFBP8418_019450 ) OR ( XFCFBP8418_022120 ) OR ( XFCFBP8418_024570 ) OR ( XFCFBP8418_024670 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_3d8f4895-48d4-4116-bfd5-088e7038a524"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010500"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_019450"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004070"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024570"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007680"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_013240"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022120"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004550"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdapDala_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_LalaDgluMdapDala_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HMPK1" metaid="ef3008e2-953d-4543-82a4-ec97725519db" name="hydroxymethylpyrimidine_kinase__ATP_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006340</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 2.7.1.49</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ef3008e2-953d-4543-82a4-ec97725519db"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.7.1.49"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006340"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ahmmp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4ampm_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_DKMPPD" metaid="ccd90c3a-41ed-419a-a0bb-2b355bea1754" name="R_DKMPPD" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Methionine_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ccd90c3a-41ed-419a-a0bb-2b355bea1754"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_o2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dkmpp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_for_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_2kmb_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_G3PSabcpp" metaid="e0e6c33a-04e0-41d4-83a0-8545aa8b6f66" name="sn_glycerol_3_phosphoserine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment AND XFCFBP8418_004930 AND XFCFBP8418_004940 AND XFCFBP8418_024670</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#e0e6c33a-04e0-41d4-83a0-8545aa8b6f66"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024670"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004930"/> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3ps_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_g3ps_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HDCAtex" metaid="_5ccf13a2-dbfe-4669-80a1-7789fd33b591" name="Hexadecanoate_transport_via_diffusion__extracellular_to_periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_024810</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5ccf13a2-dbfe-4669-80a1-7789fd33b591"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_024810"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_hdca_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_hdca_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_VALTA" metaid="ab3fe1bd-a74c-4e17-bb7d-2b5c861e2a13" name="valine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_001240</p> + <p>SUBSYSTEM: Valine__Leucine__and_Isoleucine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.42</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ab3fe1bd-a74c-4e17-bb7d-2b5c861e2a13"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.42"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_001240"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_val_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3mob_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PPCDC" metaid="ed9df163-5291-41cb-ac95-96c5bba691c7" name="phosphopantothenoylcysteine_decarboxylase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_015430</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.36</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ed9df163-5291-41cb-ac95-96c5bba691c7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.36"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_015430"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_4ppcys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pan4p_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GLYCLTt4pp" metaid="c88ac52f-c624-4690-8e64-f51c7cf6aabe" name="glycolate_transport_via_sodium_symport__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020610</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c88ac52f-c624-4690-8e64-f51c7cf6aabe"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020610"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glyclt_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_na1_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_na1_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_glyclt_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_NI2t3pp" metaid="_1e4068e5-51d7-4fd8-a4f4-8dd61624331a" name="nickle__Ni_2__transport_out_via_proton_antiport__periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010570</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1e4068e5-51d7-4fd8-a4f4-8dd61624331a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010570"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_ni2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ni2_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_H2O2tpp" metaid="_00f62093-9dbf-428f-bb5f-36cc0c95c0c9" name="hydrogen_peroxide_transport_via_diffusion__periplasm_to_cytoplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_00f62093-9dbf-428f-bb5f-36cc0c95c0c9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o2_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PDH" metaid="_89f5fa23-9fb3-4857-9262-2dff6e554c93" name="pyruvate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005940 AND XFCFBP8418_010550 AND XFCFBP8418_010560</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_89f5fa23-9fb3-4857-9262-2dff6e554c93"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005940"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010550"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010560"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pyr_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_accoa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_TYRTA" metaid="_1a0f1f58-e6e3-42cf-8c76-5029730e45d4" name="tyrosine_transaminase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_014480 ) OR ( XFCFBP8418_020310 )</p> + <p>SUBSYSTEM: Tyrosine__Tryptophan__and_Phenylalanine_Metabolism</p> + <p>EC_NUMBER: 2.6.1.57</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_1a0f1f58-e6e3-42cf-8c76-5029730e45d4"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/2.6.1.57"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020310"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_014480"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_tyr_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_glu_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_34hpp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTHP" metaid="ed1c2ad2-b573-4550-aaa1-556818013dc1" name="glutathione_peroxidase__c_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010100</p> + <p>SUBSYSTEM: Superoxide_radicals_degradation</p> + <p>EC_NUMBER: 1.11.1.9</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ed1c2ad2-b573-4550-aaa1-556818013dc1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.11.1.9"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010100"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_h2o2_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthox_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="2"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_GTHS" metaid="_2f3ecbc8-470c-4eb7-9768-26bab3a42633" name="glutathione_synthetase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_000840</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 6.3.2.3</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2f3ecbc8-470c-4eb7-9768-26bab3a42633"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/6.3.2.3"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_000840"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_glucys_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_gly_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_gthrd_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR180" metaid="_68542414-bf2e-46a6-944f-0ee32746eb97" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C18_0_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_68542414-bf2e-46a6-944f-0ee32746eb97"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_3ooctdACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hoctaACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_3OAR181" metaid="_5f0f1a76-1f64-4e0f-a45f-242afa43424e" name="3_oxoacyl__acyl_carrier_protein__reductase__n_C18_1_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_005910</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.100</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f0f1a76-1f64-4e0f-a45f-242afa43424e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.100"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_005910"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3ocvac11eACP_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nadph_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_3hcvac11eACP_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_E4PD" metaid="_89a7a200-7abe-4471-bcd7-a5c482b3e7d8" name="Erythrose_4_phosphate_dehydrogenase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_007260</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.2.1.72</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_89a7a200-7abe-4471-bcd7-a5c482b3e7d8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.2.1.72"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_007260"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_e4p_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="2"/> + <speciesReference constant="true" species="M_4per_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ALKP" metaid="_50f0e00d-d655-43c6-82c6-dcd4a2ea5411" name="R_ALKP" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006010</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 3.1.3.2</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_50f0e00d-d655-43c6-82c6-dcd4a2ea5411"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.3.2"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006010"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_dhap_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_dha_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UM4PCP" metaid="_82ef8cdc-f8b5-4c23-b88d-60c94ea708d2" name="UDP_N_acetylmuramoyl_L_alanyl_D_gamma_glutamyl_meso_2_6_diaminopimelate_D_alanine_L_D_carboxypeptidase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_006050</p> + <p>SUBSYSTEM: Murein_Biosynthesis</p> + <p>EC_NUMBER: 3.4.17.13</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_82ef8cdc-f8b5-4c23-b88d-60c94ea708d2"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.4.17.13"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_006050"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_um4p_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ala_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ugmd_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_AKGDH" metaid="_7c11985a-84f0-4221-bf6f-e2d48fdb05e1" name="2_Oxoglutarate_dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_002140 AND XFCFBP8418_002150 AND XFCFBP8418_010560</p> + <p>SUBSYSTEM: Citric_Acid_Cycle</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_7c11985a-84f0-4221-bf6f-e2d48fdb05e1"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:and> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002150"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_002140"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010560"/> + </fbc:and> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_akg_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_succoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_co2_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_Htex" metaid="_87f9ed1c-6979-4b1d-b0f5-ba4aa7d809be" name="proton_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_87f9ed1c-6979-4b1d-b0f5-ba4aa7d809be"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE80" metaid="a6fe5fae-c98c-4143-83a3-fa6cc92188e8" name="R_FACOAE80" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#a6fe5fae-c98c-4143-83a3-fa6cc92188e8"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_occoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_octa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_RIBabcpp" metaid="b282077a-1401-46fa-b1d7-a9dd3b808eaa" name="R_RIBabcpp" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.17</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#b282077a-1401-46fa-b1d7-a9dd3b808eaa"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.17"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rib_D_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_rib_D_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_HISabcpp" metaid="ba31d6cb-e824-4706-9e51-539ef32f482a" name="L_histidine_transport_via_ABC_system__periplasm_" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: ( XFCFBP8418_004750 ) OR ( XFCFBP8418_022890 )</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: 3.6.3.21</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#ba31d6cb-e824-4706-9e51-539ef32f482a"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.6.3.21"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:or> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_004750"/> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022890"/> + </fbc:or> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_his_L_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_atp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_his_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pi_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_adp_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ASPt2_2tex" metaid="d7e34678-04d4-4e7a-8de6-cc6b0eb0f51e" name="R_ASPt2_2tex" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Transport__Outer_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#d7e34678-04d4-4e7a-8de6-cc6b0eb0f51e"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_asp_L_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_asp_L_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_IZPN" metaid="_5f616904-a689-4932-ac44-22ad74389bd9" name="imidazolonepropionase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Histidine_Metabolism</p> + <p>EC_NUMBER: 3.5.2.7</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_5f616904-a689-4932-ac44-22ad74389bd9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.5.2.7"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4izp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_forglu_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_ENO" metaid="_179a44bc-7464-4c08-a043-29d4c2ba14ef" name="enolase" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_022220</p> + <p>SUBSYSTEM: Glycolysis_Gluconeogenesis</p> + <p>EC_NUMBER: 4.2.1.11</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_179a44bc-7464-4c08-a043-29d4c2ba14ef"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.2.1.11"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_022220"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_2pg_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_pep_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CO2tex" metaid="_809d6c35-a3db-4775-a2fd-48eafb45eb30" name="CO2_transport_via_diffusion__extracellular_to_periplasm_" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Inorganic_Ion_Transport_and_Metabolism</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_809d6c35-a3db-4775-a2fd-48eafb45eb30"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_co2_e" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_co2_p" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_PERD" metaid="_76242408-fe56-48c6-ba35-5e36fd9d74d9" name="Erythronate_4_phosphate__4per__dehydrogenase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: No_Assignment</p> + <p>SUBSYSTEM: Cofactor_and_Prosthetic_Group_Biosynthesis</p> + <p>EC_NUMBER: 1.1.1.290</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_76242408-fe56-48c6-ba35-5e36fd9d74d9"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/1.1.1.290"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="No_Assignment"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_4per_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_ohpb_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_UDPXYLS" metaid="_9b1ab803-476c-47f6-b5d0-6bab0d1c3d9d" name="UDP_xylose_synthase" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_020820</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 4.1.1.35</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_9b1ab803-476c-47f6-b5d0-6bab0d1c3d9d"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.1.1.35"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_020820"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_nadh_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udp4kp_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_nad_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_udpxyl_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_CYSTGL" metaid="c92731bb-f621-47fa-b53b-f050ea82b7b7" name="R_CYSTGL" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_010590</p> + <p>SUBSYSTEM: Cystein_Metabolism</p> + <p>EC_NUMBER: 4.4.1.1</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#c92731bb-f621-47fa-b53b-f050ea82b7b7"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/4.4.1.1"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_010590"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_cyst_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_2obut_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_cys_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_nh4_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_99999_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FUCtpp" metaid="_34363cfc-fa7f-4df4-a073-49f5befcdf50" name="R_FUCtpp" reversible="true"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_018650</p> + <p>SUBSYSTEM: Transport__Inner_Membrane</p> + <p>EC_NUMBER: No_Assignment</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_34363cfc-fa7f-4df4-a073-49f5befcdf50"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/No_Assignment"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_018650"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_h_p" stoichiometry="1"/> + <speciesReference constant="true" species="M_fuc_L_p" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_fuc_L_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + <reaction fbc:lowerFluxBound="LOWER_BOUND_0_0" fbc:upperFluxBound="UPPER_BOUND_99999_0" id="R_FACOAE120" metaid="_2691931b-9cfe-40d9-95d9-13e4ed057413" name="R_FACOAE120" reversible="false"> + <notes> + <body xmlns="http://www.w3.org/1999/xhtml"> + <p>GENE_ASSOCIATION: XFCFBP8418_025070</p> + <p>SUBSYSTEM: Cell_Envelope_Biosynthesis</p> + <p>EC_NUMBER: 3.1.2.20</p> + </body> + </notes> + <annotation> + <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> + <rdf:Description rdf:about="#_2691931b-9cfe-40d9-95d9-13e4ed057413"> + <bqbiol:is> + <rdf:Bag> + <rdf:li rdf:resource="http://identifiers.org/ec-code/3.1.2.20"/> + </rdf:Bag> + </bqbiol:is> + </rdf:Description> + </rdf:RDF> + </annotation> + <fbc:geneProductAssociation> + <fbc:geneProductRef fbc:geneProduct="XFCFBP8418_025070"/> + </fbc:geneProductAssociation> + <listOfReactants> + <speciesReference constant="true" species="M_ddcacoa_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h2o_c" stoichiometry="1"/> + </listOfReactants> + <listOfProducts> + <speciesReference constant="true" species="M_ddca_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_h_c" stoichiometry="1"/> + <speciesReference constant="true" species="M_coa_c" stoichiometry="1"/> + </listOfProducts> + </reaction> + </listOfReactions> + </model> +</sbml>
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tools/convert/SBMLwizard/test-data/XF_network_C_Side.tab Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,6 @@ +M_atp_c +M_h2o_c +M_pi_c +M_adp_c +M_ppi_c +M_h_c
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tools/convert/SBMLwizard/test-data/XF_network_R_Seed.tab Tue Jul 04 10:21:26 2023 +0000 @@ -0,0 +1,2 @@ +R_ACGS +R_GLUN
--- a/tools/met4j.yml Wed May 17 13:26:37 2023 +0000 +++ b/tools/met4j.yml Tue Jul 04 10:21:26 2023 +0000 @@ -54,6 +54,9 @@ - name: Kegg2Sbml owner: metexplore tool_panel_section_id: met4j_convert + - name: SBMLwizard + owner: metexplore + tool_panel_section_id: met4j_convert - name: Sbml2Graph owner: metexplore tool_panel_section_id: met4j_convert
--- a/tools/networkAnalysis/ChokePoint/ChokePoint.xml Wed May 17 13:26:37 2023 +0000 +++ b/tools/networkAnalysis/ChokePoint/ChokePoint.xml Tue Jul 04 10:21:26 2023 +0000 @@ -8,14 +8,10 @@ <container type="singularity">oras://registry.forgemia.inra.fr/metexplore/met4j/met4j-singularity:MET4J_VERSION_TEST</container> </requirements> <command detect_errors="exit_code"><![CDATA[sh /usr/bin/met4j.sh networkAnalysis.ChokePoint -i "$inputPath" -#if str($sideCompoundFile) != 'None': - -s "$sideCompoundFile" -#end if -o "$outputPath" ]]></command> <inputs> <param argument="-i" format="sbml" label="input SBML file" name="inputPath" optional="false" type="data" value=""/> - <param argument="-s" format="txt" label="an optional file containing list of side compounds to ignore" name="sideCompoundFile" optional="true" type="data" value=""/> </inputs> <outputs> <data format="tsv" name="outputPath"/> @@ -25,28 +21,16 @@ <param name="inputPath" value="XF_network.sbml"/> <output ftype="tsv" name="outputPath"> <assert_contents> - <has_n_lines n="202"/> + <has_n_lines n="695"/> <has_n_columns n="3"/> <has_line_matching expression="R_ADEtex.*adenine_transport_via_diffusion__extracellular_to_periplasm_.*M_ade_e <==> M_ade_p" n="1"/> - <has_line_matching expression="R_X5PL3E.*R_X5PL3E.*M_xu5p_L_c --> M_ru5p_L_c" n="1"/> - </assert_contents> - </output> - </test> - <test> - <param name="inputPath" value="XF_network.sbml"/> - <param name="sideCompoundFile" value="sides.txt"/> - <output ftype="tsv" name="outputPath"> - <assert_contents> - <has_n_lines n="200"/> - <has_n_columns n="3"/> - <has_line_matching expression="R_ADEtex.*adenine_transport_via_diffusion__extracellular_to_periplasm_.*M_ade_e <==> M_ade_p" n="1" negate="true"/> - <has_line_matching expression="R_X5PL3E.*R_X5PL3E.*M_xu5p_L_c --> M_ru5p_L_c" n="1" negate="true"/> + <has_line_matching expression="R_AGDC_r.*R_AGDC_r.*M_acgam6p_c \+ M_h2o_c --> M_ac_c \+ M_gam6p_c" n="1"/> </assert_contents> </output> </test> </tests> <help><![CDATA[Compute the Choke points of a metabolic network. -Load points constitute an indicator of lethality and can help identifying drug target Choke points are reactions that are required to consume or produce one compound. Targeting of choke point can lead to the accumulation or the loss of some metabolites, thus choke points constitute an indicator of lethality and can help identifying drug target +Choke points constitute an indicator of lethality and can help identifying drug target Choke points are reactions that are required to consume or produce one compound. Targeting of choke point can lead to the accumulation or the loss of some metabolites, thus choke points constitute an indicator of lethality and can help identifying drug target See : Syed Asad Rahman, Dietmar Schomburg; Observing local and global properties of metabolic pathways: ‘load points’ and ‘choke points’ in the metabolic networks. Bioinformatics 2006; 22 (14): 1767-1774. doi: 10.1093/bioinformatics/btl181]]></help> <citations/> </tool>
--- a/tools/networkAnalysis/ChokePoint/test-data/sides.txt Wed May 17 13:26:37 2023 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,4 +0,0 @@ -M_xu5p_L_c -M_ru5p_L_c -M_ade_e -M_ade_p \ No newline at end of file
--- a/tools/networkAnalysis/MetaboRank/MetaboRank.xml Wed May 17 13:26:37 2023 +0000 +++ b/tools/networkAnalysis/MetaboRank/MetaboRank.xml Tue Jul 04 10:21:26 2023 +0000 @@ -42,7 +42,19 @@ <outputs> <data format="tsv" name="output"/> </outputs> - <tests/> + <tests> + <test> + <param name="sbmlFilePath" value="XF_network.sbml"/> + <param name="seedsFilePath" value="XF_network_C_Seed.tab"/> + <param name="inputSide" value="XF_network_C_Side.tab"/> + <output name="output"> + <assert_contents> + <has_n_lines n="1100"/> + <has_n_columns n="11"/> + </assert_contents> + </output> + </test> + </tests> <help><O)NC</p> - </body> - </notes> - <annotation> - <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" - xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> - <rdf:Description rdf:about="#A_ext"> - <bqbiol:is> - <in:inchi xmlns:in="https://biomodels.net/inchi">InChI=1S/C2H6O/c1-2-3/h3H,2H2,1H3</in:inchi> - </bqbiol:is> - </rdf:Description> - </rdf:RDF> - </annotation> - - </species> - <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="A" name="A"/> - <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="B" name="B"/> - <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="C" name="C"/> - <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="D" name="D"/> - <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="D_ext" name="D_ext"/> - <species boundaryCondition="false" compartment="e" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="E_ext" name="E_ext"/> - <species boundaryCondition="false" compartment="c" constant="false" fbc:charge="0" hasOnlySubstanceUnits="false" id="E" name="E"/> - </listOfSpecies> - <listOfParameters> - <parameter constant="true" id="cobra_default_lb" name="cobra default - lb" sboTerm="SBO:0000626" units="mmol_per_gDW_per_hr" value="-100000.0"/> - <parameter constant="true" id="cobra_default_ub" name="cobra default - ub" sboTerm="SBO:0000626" units="mmol_per_gDW_per_hr" value="100000.0"/> - <parameter constant="true" id="cobra_0_bound" name="cobra 0 - bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="0.0"/> - <parameter constant="true" id="reac1_upper_bound" name="reac1 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="10.0"/> - <parameter constant="true" id="reac6_upper_bound" name="reac6 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="3.0"/> - <parameter constant="true" id="reac2_upper_bound" name="reac2 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="100000.0"/> - <parameter constant="true" id="reac3_upper_bound" name="reac3 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="100000.0"/> - <parameter constant="true" id="reac4_upper_bound" name="reac4 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="100000.0"/> - <parameter constant="true" id="reac5_upper_bound" name="reac5 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="100000.0"/> - <parameter constant="true" id="reac7_upper_bound" name="reac7 upper bound" sboTerm="SBO:0000625" units="mmol_per_gDW_per_hr" value="100000.0"/> - </listOfParameters> - <listOfReactions> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac1_upper_bound" id="reac1" name="reac1" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="A_ext" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="A" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_default_lb" fbc:upperFluxBound="reac2_upper_bound" id="reac2" name="reac2" reversible="true"> - <listOfReactants> - <speciesReference constant="true" species="A" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="B" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac3_upper_bound" id="reac3" name="reac3" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="A" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="C" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac4_upper_bound" id="reac4" name="reac4" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="B" stoichiometry="1.0"/> - <speciesReference constant="true" species="C" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="D" stoichiometry="1.5"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac5_upper_bound" id="reac5" name="reac5" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="D" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="D_ext" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac6_upper_bound" id="reac6" name="reac6" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="E_ext" stoichiometry="1.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="E" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - <reaction fast="false" fbc:lowerFluxBound="cobra_0_bound" fbc:upperFluxBound="reac7_upper_bound" id="reac7" name="reac7" reversible="false"> - <listOfReactants> - <speciesReference constant="true" species="E" stoichiometry="2.0"/> - </listOfReactants> - <listOfProducts> - <speciesReference constant="true" species="D" stoichiometry="1.0"/> - </listOfProducts> - </reaction> - </listOfReactions> - </model> -</sbml> \ No newline at end of file
--- a/tools/networkAnalysis/MetaboRank/test-data/weights.txt Wed May 17 13:26:37 2023 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,2 +0,0 @@ -B 10 -C 1 \ No newline at end of file
--- a/tools/tool_conf.xml Wed May 17 13:26:37 2023 +0000 +++ b/tools/tool_conf.xml Tue Jul 04 10:21:26 2023 +0000 @@ -21,6 +21,7 @@ <section id="met4j_convert" name="Met4J - convert"/> <tool file="met4j/convert/FbcToNotes/FbcToNotes.xml"/> <tool file="met4j/convert/Kegg2Sbml/Kegg2Sbml.xml"/> + <tool file="met4j/convert/SBMLwizard/SBMLwizard.xml"/> <tool file="met4j/convert/Sbml2Graph/Sbml2Graph.xml"/> <tool file="met4j/convert/Sbml2Tab/Sbml2Tab.xml"/> <tool file="met4j/convert/Tab2Sbml/Tab2Sbml.xml"/>