Mercurial > repos > metexplore > met4j_setchemicalformulas

changeset 1:e524934080ed draft

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planemo upload for repository https://forge.inrae.fr/metexplore/met4j-galaxy commit 6bb33ff0ff022029543e5e5ace7d16418715aa1c
author metexplore
date Mon, 25 Aug 2025 16:08:54 +0000
parents 8d98c7f2791d
children c1a0a6d9766a
files SetChemicalFormulas.xml macros.xml
diffstat 2 files changed, 5 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/SetChemicalFormulas.xml	Thu Mar 13 15:50:59 2025 +0000
+++ b/SetChemicalFormulas.xml	Mon Aug 25 16:08:54 2025 +0000
@@ -6,7 +6,7 @@
   </macros>
   <expand macro="bio_tools"/>
   <expand macro="requirements"/>
-  <command detect_errors="exit_code"><![CDATA[met4j fr.inrae.toulouse.metexplore.met4j_toolbox.attributes.SetChemicalFormulas#if str($colformula) != 'nan':
+  <command detect_errors="exit_code"><![CDATA[met4j attributes.SetChemicalFormulas#if str($colformula) != 'nan':
  -cf "$colformula"
 #end if
 #if str($colid) != 'nan':
--- a/macros.xml	Thu Mar 13 15:50:59 2025 +0000
+++ b/macros.xml	Mon Aug 25 16:08:54 2025 +0000
@@ -1,8 +1,9 @@
 <?xml version="1.0"?>
+<!-- This file has been automatically generated by the met4j app GenerateGalaxyFiles. Please don't edit manually. -->
 <macros>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="2.0.1">met4j</requirement>
+            <requirement type="package" version="2.1.0">met4j</requirement>
             <yield/>
         </requirements>
     </xml>
@@ -11,10 +12,10 @@
             <xref type="bio.tools">met4j</xref>
         </xrefs>
     </xml>
-    <token name="@TOOL_VERSION@">2.0.1</token>
+    <token name="@TOOL_VERSION@">2.1.0</token>
     <token name="@ATTRIBUTION@"><![CDATA[
 **Attribution**
 
-This Galaxy tool relies on the met4j toolkit which is dedicated to the structural analysis of metabolic networks (https://forgemia.inra.fr/metexplore/met4j)
+This Galaxy tool relies on the met4j toolkit which is dedicated to the structural analysis of metabolic networks (https://forge.inrae.fr/metexplore/met4j)
     ]]></token>
 </macros>
\ No newline at end of file